AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0310660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0310660 MtrunA17_Chr4g0037921 78.947 38 7 1 84 121 229 265 2.14e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 413 sgRNAs with CRISPR-Local

Find 509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAGATTATCAGTATTT+TGG 0.097766 2_4:+5471561 Msa0310660:five_prime_UTR
CGAAGTTCTAGGTTCAATTT+TGG 0.166264 2_4:+5473120 Msa0310660:five_prime_UTR
TCATGCCTATTCTTCAAAAT+TGG 0.171597 2_4:-5473223 None:intergenic
AAGTCGATCGTTAATGTTAT+TGG 0.197602 2_4:+5473151 Msa0310660:five_prime_UTR
TGATAGAGTTCTTTATAAAT+TGG 0.206729 2_4:+5471824 Msa0310660:five_prime_UTR
GGCACTGGGAGTGGCTGGTT+TGG 0.210974 2_4:+5473744 Msa0310660:five_prime_UTR
TCTTTCCTCTTTGAGTATAT+TGG 0.214805 2_4:+5473613 Msa0310660:five_prime_UTR
TGCTGACCACGGTTCTCTTC+TGG 0.234283 2_4:-5471492 None:intergenic
GGGACTGTCTGCCTTCAAAA+TGG 0.240134 2_4:+5475495 Msa0310660:CDS
CACATGTCCTCTTTCCAATT+TGG 0.244949 2_4:+5475256 Msa0310660:CDS
CATGGTTATTGTTATTGTTC+TGG 0.247624 2_4:-5470260 None:intergenic
TGCTTTATTGCCCTTCTTGA+AGG 0.255515 2_4:+5472082 Msa0310660:five_prime_UTR
GCACTGGGAGTGGCTGGTTT+GGG 0.272651 2_4:+5473745 Msa0310660:five_prime_UTR
TCACGAAACACTTCATATCT+AGG 0.281976 2_4:+5470216 Msa0310660:five_prime_UTR
GGATGAAACACCGGCTACTA+TGG 0.282207 2_4:+5471149 Msa0310660:five_prime_UTR
AGTATAATAGCTGGCATATA+AGG 0.286423 2_4:-5472432 None:intergenic
ACAAGAAGGGTATAAGGTTT+TGG 0.290686 2_4:+5471380 Msa0310660:five_prime_UTR
ATTTATAACTCTCTGTATAT+TGG 0.291943 2_4:+5473961 Msa0310660:five_prime_UTR
TCTTTATAAATTGGATGAAT+TGG 0.295496 2_4:+5471833 Msa0310660:five_prime_UTR
TTTGGTCTACAGTGTGGTTT+AGG 0.297109 2_4:+5475436 Msa0310660:CDS
GCTGTTTATAATGACCAAAT+TGG 0.304430 2_4:-5475270 None:intergenic
GTTTCCACAAGAAGGGTATA+AGG 0.306484 2_4:+5471374 Msa0310660:five_prime_UTR
GATGCTAATGTGATGCTTAA+TGG 0.306849 2_4:+5472875 Msa0310660:five_prime_UTR
TGCTCTCATGGACAGGGATT+TGG 0.309397 2_4:+5473684 Msa0310660:five_prime_UTR
AAACGCCGGATCCGTCTAAA+AGG 0.311269 2_4:+5470647 Msa0310660:five_prime_UTR
GAAGATGACTCCACCGATTA+AGG 0.312208 2_4:+5473180 Msa0310660:five_prime_UTR
CTTTGAGTATATTGGTGAAA+TGG 0.316138 2_4:+5473621 Msa0310660:five_prime_UTR
AAGCCACCAGGAGCTTCTTT+AGG 0.323637 2_4:-5471525 None:intergenic
GTTATTTAACCTCCACTTGA+TGG 0.324258 2_4:-5472963 None:intergenic
CTCCTGGGAGGAGGAATAGA+TGG 0.327493 2_4:+5470971 Msa0310660:five_prime_UTR
AAGGCTCGCGAGTTTGGTGC+TGG 0.327844 2_4:+5471720 Msa0310660:five_prime_UTR
TCCTGTTGGTGGTGTTGAAT+TGG 0.331040 2_4:+5471230 Msa0310660:five_prime_UTR
AGCAGAAGAGGAGGAATAGA+TGG 0.331460 2_4:+5470815 Msa0310660:five_prime_UTR
GGACCAAGAGAGGCATCTTT+TGG 0.333443 2_4:+5471791 Msa0310660:five_prime_UTR
AAGATGAGAGTGAACCTTAC+AGG 0.336123 2_4:+5472729 Msa0310660:five_prime_UTR
CTTCTCACATGCTTCCTGTT+GGG 0.337953 2_4:+5475156 Msa0310660:CDS
TAATCTTCAGGCTTCATAAA+AGG 0.339010 2_4:-5471549 None:intergenic
CTTGCTACACCTACGCCGTT+GGG 0.343482 2_4:+5471450 Msa0310660:five_prime_UTR
AAATGTGATTTCTTTATCAT+AGG 0.344531 2_4:+5475862 Msa0310660:three_prime_UTR
TGGCTGAATTTAAGATTTGT+AGG 0.344827 2_4:-5475917 None:intergenic
TTACACCTGGTGGTGCTACT+TGG 0.344851 2_4:+5471064 Msa0310660:five_prime_UTR
GGGAGAGAGAGGAAACAATT+AGG 0.348222 2_4:+5470707 Msa0310660:five_prime_UTR
GTTGGGAGGTTCCACAAGTT+TGG 0.348559 2_4:+5475173 Msa0310660:CDS
ATTGTTATTGTTCTGGTTCA+AGG 0.350426 2_4:-5470253 None:intergenic
CCAAAATACTGATAATCTTC+AGG 0.353123 2_4:-5471561 None:intergenic
TTCTGCAGCAAGCCAGTTAC+CGG 0.355768 2_4:-5475634 None:intergenic
CCGCTTCATATGTGCCGATT+AGG 0.356294 2_4:+5471409 Msa0310660:five_prime_UTR
GACGCCGGAGATAATGAATT+TGG 0.357554 2_4:+5470523 Msa0310660:five_prime_UTR
TCCACCCTGCCCGGAAAGTT+AGG 0.358731 2_4:+5473923 Msa0310660:five_prime_UTR
AGTACACCTCCCTAACTTTC+CGG 0.366416 2_4:-5473933 None:intergenic
AAGTCATGCTTATTCTGATT+CGG 0.367469 2_4:+5472459 Msa0310660:five_prime_UTR
ACTGATAAGGCTCGCGAGTT+TGG 0.367775 2_4:+5471714 Msa0310660:five_prime_UTR
GTGCTGGGCCTTTGTTTAAC+CGG 0.368322 2_4:+5471736 Msa0310660:five_prime_UTR
GGAGGAAGGTGGTGTGAAAA+AGG 0.369758 2_4:+5470855 Msa0310660:five_prime_UTR
CACAGCACAACCAATCAAAA+TGG 0.372170 2_4:-5472171 None:intergenic
GATTGCAATCATCTATGTAT+TGG 0.372896 2_4:+5474074 Msa0310660:exon
TGGGTTTATCATTCCGTTGA+TGG 0.375242 2_4:+5472406 Msa0310660:five_prime_UTR
TTGTTCTCAAAGTTTACCTT+TGG 0.375415 2_4:+5475418 Msa0310660:CDS
ACCTTCGACACAGATCTTTA+CGG 0.376325 2_4:+5470361 Msa0310660:five_prime_UTR
CTGGGTTAGGAGGATGGCTT+TGG 0.377749 2_4:+5472610 Msa0310660:five_prime_UTR
AGGTCGAACTGTCCGGTAAC+TGG 0.382123 2_4:+5475622 Msa0310660:intron
AGCCACTGTGGAAGGGTATT+AGG 0.382814 2_4:+5472342 Msa0310660:five_prime_UTR
GAAGAGTATCCCGAAGTTCT+AGG 0.383693 2_4:+5473109 Msa0310660:five_prime_UTR
TTTGAGTATATTGGTGAAAT+GGG 0.389391 2_4:+5473622 Msa0310660:five_prime_UTR
AGTCATGCTTATTCTGATTC+GGG 0.389394 2_4:+5472460 Msa0310660:five_prime_UTR
CCTTCTCACATGCTTCCTGT+TGG 0.392562 2_4:+5475155 Msa0310660:CDS
GGAGAAGTTTCAAATATGTT+TGG 0.392943 2_4:-5473808 None:intergenic
GGACTGTCTGCCTTCAAAAT+GGG 0.396665 2_4:+5475496 Msa0310660:CDS
TGCCGTGAAGCACATGGCAC+TGG 0.397418 2_4:+5473729 Msa0310660:five_prime_UTR
CATCTCGATCTTTGTCTCTT+CGG 0.397929 2_4:-5471126 None:intergenic
CTGTTAATCGGAGCAATTAC+AGG 0.398020 2_4:-5470493 None:intergenic
CTGCAATACCTGCCCTTACA+AGG 0.399612 2_4:+5475474 Msa0310660:CDS
GTAGCAAGAAGCTTCCTTGC+AGG 0.400126 2_4:-5471435 None:intergenic
AGCTTGGATAGTGAATTTAT+AGG 0.405098 2_4:+5475290 Msa0310660:CDS
AGCAGCAGCTTCAGCAAGTG+CGG 0.405247 2_4:-5472285 None:intergenic
GTACACCTCCCTAACTTTCC+GGG 0.406012 2_4:-5473932 None:intergenic
AGTAGTCTTCATCAATCAAA+AGG 0.407120 2_4:-5471896 None:intergenic
TGAGCTTCTTGAGATGCTTA+AGG 0.409469 2_4:+5473339 Msa0310660:five_prime_UTR
TTTGCTTGAGGATGCTCTCA+TGG 0.410867 2_4:+5473672 Msa0310660:five_prime_UTR
GTGGTTTAGGTGATGAGTTT+AGG 0.413787 2_4:+5475449 Msa0310660:CDS
GTTGCTTATGCAGCCTACTT+TGG 0.415175 2_4:+5471767 Msa0310660:five_prime_UTR
CCAGAACTTAACGTGCAAAA+TGG 0.415455 2_4:+5473574 Msa0310660:five_prime_UTR
TTCCTTGCAGGTGTCCTAAT+CGG 0.417079 2_4:-5471423 None:intergenic
TCCATGACCATTCGCCTGTA+AGG 0.417256 2_4:-5472743 None:intergenic
CCACAAATCTGAGGAAGATA+TGG 0.419038 2_4:-5472938 None:intergenic
TGAGAAGGTGGTCACTAACT+TGG 0.419649 2_4:+5472772 Msa0310660:five_prime_UTR
CCATATCTTCCTCAGATTTG+TGG 0.421065 2_4:+5472938 Msa0310660:five_prime_UTR
TCCCAGTGCCATGTGCTTCA+CGG 0.421966 2_4:-5473731 None:intergenic
TTCCTCTCTTTCTGCTCATC+CGG 0.422972 2_4:-5471621 None:intergenic
TGGTAAGGCTGCGCCTGTGC+AGG 0.426212 2_4:+5470765 Msa0310660:five_prime_UTR
CCTACACCTGGTGCTTTACA+AGG 0.426727 2_4:+5471258 Msa0310660:five_prime_UTR
ATGCTAATGTGATGCTTAAT+GGG 0.428045 2_4:+5472876 Msa0310660:five_prime_UTR
TGGGTAGGATTGCTGATCGT+GGG 0.432130 2_4:+5473275 Msa0310660:five_prime_UTR
TGGACAGGGATTTGGTTCAT+AGG 0.432432 2_4:+5473692 Msa0310660:five_prime_UTR
CATCATCACTGGTCTGCTCT+TGG 0.435116 2_4:-5472856 None:intergenic
AAGGCAGACAGTCCCTTGTA+AGG 0.436993 2_4:-5475487 None:intergenic
ATAACATTGATGAATATGTT+AGG 0.437807 2_4:+5472009 Msa0310660:five_prime_UTR
AGAGTAATTGATGCTACTCC+TGG 0.438883 2_4:+5470955 Msa0310660:five_prime_UTR
GTTGTCTTGTATGAATATCT+TGG 0.439580 2_4:+5473085 Msa0310660:five_prime_UTR
GTTTCTTCTTCTTCAGTAGC+AGG 0.441462 2_4:-5470418 None:intergenic
AGAGCTACTGTGAACACTTT+CGG 0.442013 2_4:+5473382 Msa0310660:five_prime_UTR
CAAAATTGAACCTAGAACTT+CGG 0.442182 2_4:-5473119 None:intergenic
GACTACTATGCCCGTGTTGA+GGG 0.443057 2_4:+5471912 Msa0310660:five_prime_UTR
CTTGGCAAGCTCGGCACACT+GGG 0.443354 2_4:+5472126 Msa0310660:five_prime_UTR
CTGGGAAGCAAATCCTTAAT+CGG 0.444223 2_4:-5473193 None:intergenic
CTTCAAAATTGGAGTCAACC+TGG 0.446024 2_4:-5473212 None:intergenic
CTCTCTGTATATTGGAGCTC+AGG 0.446206 2_4:+5473969 Msa0310660:five_prime_UTR
TCCATTTGCTGAACTATGTC+TGG 0.446236 2_4:+5473785 Msa0310660:five_prime_UTR
TCTTCAGTAGCAGGAATTGA+AGG 0.447200 2_4:-5470409 None:intergenic
GAGAGATGAAGCGTTGAAGA+GGG 0.447466 2_4:+5470687 Msa0310660:five_prime_UTR
TTGAGGATGCTCTCATGGAC+AGG 0.447512 2_4:+5473677 Msa0310660:five_prime_UTR
TTTGAGGCAGTTAACTGATA+AGG 0.448032 2_4:+5471701 Msa0310660:five_prime_UTR
GTTGATTTCGAAGAAGAAGA+AGG 0.451871 2_4:+5470729 Msa0310660:five_prime_UTR
ATAAATTGGATGAATTGGTT+CGG 0.454142 2_4:+5471838 Msa0310660:five_prime_UTR
CACATGGCACTGGGAGTGGC+TGG 0.454748 2_4:+5473739 Msa0310660:five_prime_UTR
ACAAGAATCTTATGCACATA+AGG 0.457643 2_4:-5471861 None:intergenic
TCTGTCAGAGTAAGAAATCT+TGG 0.458268 2_4:+5472108 Msa0310660:five_prime_UTR
TTTGGTCATTATAAACAGCT+TGG 0.458317 2_4:+5475274 Msa0310660:CDS
CGTCTTCTCGATTTCATCAT+CGG 0.458922 2_4:-5470287 None:intergenic
AAGAAGGAAGAGGAAGAAGC+TGG 0.460954 2_4:+5470745 Msa0310660:five_prime_UTR
GGTGTCGTCGCATTCGAATC+CGG 0.461158 2_4:-5470901 None:intergenic
ATGGGATCAGAATCAGAATC+TGG 0.462957 2_4:+5470834 Msa0310660:five_prime_UTR
TGGGATGCTACTCCAACTCC+TGG 0.463464 2_4:+5470931 Msa0310660:five_prime_UTR
GCCAATTCAACACCACCAAC+AGG 0.464397 2_4:-5471231 None:intergenic
GATTCGAATGCGACGACACC+GGG 0.464790 2_4:+5470904 Msa0310660:five_prime_UTR
GTGCCATGAGGAACAATTGA+TGG 0.465345 2_4:+5473051 Msa0310660:five_prime_UTR
ATGCGACGACACCGGGGAGA+TGG 0.465443 2_4:+5470911 Msa0310660:five_prime_UTR
AACTTGTGGAACCTCCCAAC+AGG 0.465872 2_4:-5475170 None:intergenic
ACAGATCCTCATCCATTCTC+TGG 0.468210 2_4:-5473314 None:intergenic
CACGAAACACTTCATATCTA+GGG 0.469789 2_4:+5470217 Msa0310660:five_prime_UTR
GACTTCTGATTGGGATGCAC+CGG 0.469853 2_4:+5470882 Msa0310660:five_prime_UTR
TGAAGGGATGAGGGTAGCAT+TGG 0.472155 2_4:+5473861 Msa0310660:five_prime_UTR
AAAATTGAACCTAGAACTTC+GGG 0.472948 2_4:-5473118 None:intergenic
AGTGTCGTTGCATCTGCTCT+CGG 0.474620 2_4:+5472053 Msa0310660:five_prime_UTR
TCATCAATGTTATCTATGTC+AGG 0.476225 2_4:-5471999 None:intergenic
ACCTCCCTAACTTTCCGGGC+AGG 0.476349 2_4:-5473928 None:intergenic
CTCAACAAATTATACTGCTC+TGG 0.476465 2_4:-5471291 None:intergenic
TCTTGCTACACCTACGCCGT+TGG 0.476894 2_4:+5471449 Msa0310660:five_prime_UTR
GCCAGACATAGTTCAGCAAA+TGG 0.476897 2_4:-5473786 None:intergenic
AAAGGCTAAGACTTCTGATT+GGG 0.476928 2_4:+5470873 Msa0310660:five_prime_UTR
TCTAATCTCAGTAAAGCTGC+TGG 0.478206 2_4:+5471948 Msa0310660:five_prime_UTR
TGCGACGACACCGGGGAGAT+GGG 0.478386 2_4:+5470912 Msa0310660:five_prime_UTR
AGTGGCTGGTTTGGGTTGTG+AGG 0.478528 2_4:+5473753 Msa0310660:five_prime_UTR
AAAAGGCTAAGACTTCTGAT+TGG 0.479035 2_4:+5470872 Msa0310660:five_prime_UTR
CTCACATGCTTCCTGTTGGG+AGG 0.480426 2_4:+5475159 Msa0310660:CDS
GTAGTCTTCATCAATCAAAA+GGG 0.482357 2_4:-5471895 None:intergenic
GTTGAATGAAGAGAATGAAG+AGG 0.482375 2_4:+5471590 Msa0310660:five_prime_UTR
TACACCTGGTGGTGCTACTT+GGG 0.482601 2_4:+5471065 Msa0310660:five_prime_UTR
GCTTATGCAGCCTACTTTGG+AGG 0.483942 2_4:+5471770 Msa0310660:five_prime_UTR
TGAGAGATGAAGCGTTGAAG+AGG 0.484924 2_4:+5470686 Msa0310660:five_prime_UTR
ATAATTTGTTGAGGTGGGAG+AGG 0.487090 2_4:+5471301 Msa0310660:five_prime_UTR
CAAGGTCAATACAGTTCTCC+TGG 0.488577 2_4:-5473252 None:intergenic
GCATAAGCAACGGCAGTATC+CGG 0.489503 2_4:-5471755 None:intergenic
CGATTAAGGATTTGCTTCCC+AGG 0.491590 2_4:+5473194 Msa0310660:five_prime_UTR
GGGCAGGGTGGAACAATCCT+TGG 0.493584 2_4:-5473912 None:intergenic
AGCGTTGAAGAGGGAGAGAG+AGG 0.494960 2_4:+5470696 Msa0310660:five_prime_UTR
GTTGGTGTTGCTGATATTGT+TGG 0.495156 2_4:+5472686 Msa0310660:five_prime_UTR
TTCAAGAAGGGCAATAAAGC+AGG 0.495269 2_4:-5472080 None:intergenic
TTGTGCTCATCCTCTAGTGA+TGG 0.495697 2_4:-5474012 None:intergenic
GGAAGAGGAAGAAGCTGGTA+AGG 0.495769 2_4:+5470750 Msa0310660:five_prime_UTR
GGATATATTGCGAAAGCCAT+CGG 0.495825 2_4:+5473403 Msa0310660:five_prime_UTR
GCAGTATAATTTGTTGAGGT+GGG 0.495847 2_4:+5471296 Msa0310660:five_prime_UTR
GAAGCACATGGCACTGGGAG+TGG 0.497504 2_4:+5473735 Msa0310660:five_prime_UTR
GGAAAGTTAGGGAGGTGTAC+TGG 0.497515 2_4:+5473935 Msa0310660:five_prime_UTR
TCTTGGCAAGCTCGGCACAC+TGG 0.499203 2_4:+5472125 Msa0310660:five_prime_UTR
GATTATTCAATAGAGTTGCC+AGG 0.499509 2_4:-5473438 None:intergenic
AAACTTCTGGGTTAGGAGGA+TGG 0.499766 2_4:+5472604 Msa0310660:five_prime_UTR
TGCTACCCTCATCCCTTCAA+TGG 0.500344 2_4:-5473857 None:intergenic
GTAATCCCGCCACTAAGCTT+AGG 0.501057 2_4:-5471096 None:intergenic
GCAAGAATTACGTAAGAAGA+TGG 0.502364 2_4:+5470309 Msa0310660:five_prime_UTR
GTTATCTATGTCAGGCCTCA+TGG 0.502813 2_4:-5471991 None:intergenic
CCACCCTGCCCGGAAAGTTA+GGG 0.503764 2_4:+5473924 Msa0310660:five_prime_UTR
AACTTTGCTGCGTCAATCAC+CGG 0.504140 2_4:+5470469 Msa0310660:five_prime_UTR
TAACCAAAAGATGCCTCTCT+TGG 0.506202 2_4:-5471794 None:intergenic
GATCTTTGTCTCTTCGGAGT+AGG 0.506765 2_4:-5471120 None:intergenic
GCGTCGTTAGTACTGTTAAT+CGG 0.507403 2_4:-5470505 None:intergenic
AAGGATTGTTCCACCCTGCC+CGG 0.508736 2_4:+5473914 Msa0310660:five_prime_UTR
GATTCAAGCATGACAACTGT+TGG 0.508875 2_4:+5475198 Msa0310660:CDS
GCAGGTGTAGCACCAGGTAA+TGG 0.509309 2_4:-5471183 None:intergenic
TGCCTTCAAAATGGGGAAGA+AGG 0.510699 2_4:+5475504 Msa0310660:CDS
CTTGTGGAAATTATAGAGCA+TGG 0.510872 2_4:+5472212 Msa0310660:five_prime_UTR
AGCAGTATAATTTGTTGAGG+TGG 0.511121 2_4:+5471295 Msa0310660:five_prime_UTR
CCTCCCTAACTTTCCGGGCA+GGG 0.511382 2_4:-5473927 None:intergenic
ACCTTACAGGCGAATGGTCA+TGG 0.511454 2_4:+5472742 Msa0310660:five_prime_UTR
TGCTGTGACTCCTTTGCTTG+AGG 0.511865 2_4:+5473660 Msa0310660:five_prime_UTR
ATAATGACCAAATTGGAAAG+AGG 0.513267 2_4:-5475263 None:intergenic
TGGGATGAGACACCGACGCC+GGG 0.513612 2_4:+5470991 Msa0310660:five_prime_UTR
TCAATTACTCTCCCAGGAGT+TGG 0.514974 2_4:-5470943 None:intergenic
TGCGAAAGCCATCGGTCCAC+AGG 0.515352 2_4:+5473411 Msa0310660:five_prime_UTR
AATGTGATGCTTAATGGGTT+CGG 0.516022 2_4:+5472881 Msa0310660:five_prime_UTR
ATTGAATAATCTCAAGGTGC+AGG 0.516114 2_4:+5473450 Msa0310660:five_prime_UTR
TGATATTGATGCACGGTTGG+AGG 0.516262 2_4:+5472802 Msa0310660:five_prime_UTR
TTCATAAAAGGCAAGCCACC+AGG 0.516886 2_4:-5471537 None:intergenic
TCTGATTCAATCTCCGTCTC+CGG 0.517371 2_4:-5470582 None:intergenic
GTCTCCGGTAATCATCTTCA+CGG 0.517637 2_4:-5470567 None:intergenic
ATCTGATATTGATGCACGGT+TGG 0.519118 2_4:+5472799 Msa0310660:five_prime_UTR
ATATGCCAGCTATTATACTA+AGG 0.519308 2_4:+5472436 Msa0310660:five_prime_UTR
CTATGCCCGTGTTGAGGGGA+GGG 0.519770 2_4:+5471917 Msa0310660:five_prime_UTR
CCTGGTGTTACTCCTGTTGG+TGG 0.520763 2_4:+5471219 Msa0310660:five_prime_UTR
GTTCTTAATTACTGTCTCCA+AGG 0.520876 2_4:+5473895 Msa0310660:five_prime_UTR
AGTTTGTACCTGCCAGAGAA+TGG 0.523117 2_4:+5473302 Msa0310660:five_prime_UTR
TTGACCGTGAAGATGATTAC+CGG 0.523129 2_4:+5470563 Msa0310660:five_prime_UTR
ACACCTGGTGTTACTCCTGT+TGG 0.523987 2_4:+5471216 Msa0310660:five_prime_UTR
CGATACTCATTCATCAGTGC+TGG 0.524696 2_4:-5473547 None:intergenic
GATGCTTAAGGCACACAAGA+AGG 0.525703 2_4:+5473351 Msa0310660:five_prime_UTR
GTGTGTGAGCACCGAGGGTG+TGG 0.526071 2_4:+5472538 Msa0310660:five_prime_UTR
TTCAAAATTGGAGTCAACCT+GGG 0.526301 2_4:-5473211 None:intergenic
TAATTTGTTGAGGTGGGAGA+GGG 0.527574 2_4:+5471302 Msa0310660:five_prime_UTR
ATCCTCATCCATTCTCTGGC+AGG 0.527834 2_4:-5473310 None:intergenic
TCCCATCTATTCCTCCTCCC+AGG 0.529228 2_4:-5470973 None:intergenic
GATGCTACTCCTAAGCTTAG+TGG 0.529824 2_4:+5471087 Msa0310660:five_prime_UTR
TGGAAGCCATTGAAGGGATG+AGG 0.531614 2_4:+5473851 Msa0310660:five_prime_UTR
TCAGAAACTTCTGGGTTAGG+AGG 0.533859 2_4:+5472600 Msa0310660:five_prime_UTR
AGCAGAATCAACAGCAGAAG+AGG 0.534224 2_4:+5470803 Msa0310660:five_prime_UTR
GCATATAAGGCTTCCATCAA+CGG 0.534950 2_4:-5472419 None:intergenic
GGTTGATTCTGATGCTACAC+CGG 0.536421 2_4:+5471020 Msa0310660:five_prime_UTR
TCTCAGTAAAGCTGCTGGGT+TGG 0.536657 2_4:+5471953 Msa0310660:five_prime_UTR
TTTATGCAGGTCGAACTGTC+CGG 0.537174 2_4:+5475615 Msa0310660:intron
CATCGGTCCACAGGATGTCC+TGG 0.537451 2_4:+5473420 Msa0310660:five_prime_UTR
TTCGAAGAAGAAGAAGGAAG+AGG 0.537961 2_4:+5470735 Msa0310660:five_prime_UTR
CGAAGAGACAAAGATCGAGA+TGG 0.538021 2_4:+5471127 Msa0310660:five_prime_UTR
GCTTGAATCTGCCAAACTTG+TGG 0.538852 2_4:-5475184 None:intergenic
AAAACCTTATACCCTTCTTG+TGG 0.539245 2_4:-5471378 None:intergenic
CTCTCTTGGTCCTCCAAAGT+AGG 0.542045 2_4:-5471780 None:intergenic
GAATGAAGAGGAGTTGTCTC+CGG 0.542145 2_4:+5471602 Msa0310660:five_prime_UTR
ATCACAGCATTTATCACATG+TGG 0.542295 2_4:-5473829 None:intergenic
GCTGAAGCTGCTGCTCCCTA+CGG 0.542849 2_4:+5472293 Msa0310660:five_prime_UTR
CTCCGGATGAGCAGAAAGAG+AGG 0.543658 2_4:+5471619 Msa0310660:five_prime_UTR
GAAGGGATGAGGGTAGCATT+GGG 0.545211 2_4:+5473862 Msa0310660:five_prime_UTR
ATCACTGGTCTGCTCTTGGA+AGG 0.546077 2_4:-5472852 None:intergenic
ATTGAATCAGATTCTTTCGC+CGG 0.546582 2_4:+5470594 Msa0310660:five_prime_UTR
GGTGTTGAAGCCACTGTGGA+AGG 0.546664 2_4:+5472334 Msa0310660:five_prime_UTR
GCAAAAGCATCATGTCGATC+CGG 0.547159 2_4:-5470613 None:intergenic
CGCAGAGGAAAACAGCTTTG+AGG 0.548290 2_4:+5471685 Msa0310660:five_prime_UTR
CCTAATCGGCACATATGAAG+CGG 0.549087 2_4:-5471409 None:intergenic
AACTCTATTGAATAATCTCA+AGG 0.549147 2_4:+5473444 Msa0310660:five_prime_UTR
GAACAATTGATGGGTCATCT+TGG 0.549166 2_4:+5473061 Msa0310660:five_prime_UTR
GTGGGTAGGATTGCTGATCG+TGG 0.549308 2_4:+5473274 Msa0310660:five_prime_UTR
TTTCCACAAGAGATCTCAGA+TGG 0.550608 2_4:-5472199 None:intergenic
GCAACACCGTGGTAAGGTGC+TGG 0.552685 2_4:+5472364 Msa0310660:five_prime_UTR
GACTTCCTTAGTATAATAGC+TGG 0.552767 2_4:-5472441 None:intergenic
GTTTAAAATGTTACTTTGAG+AGG 0.554227 2_4:+5475771 Msa0310660:three_prime_UTR
ATGCTATGTTTCCACAAGAA+GGG 0.554606 2_4:+5471367 Msa0310660:five_prime_UTR
TTTGGGTTGTGAGGATGCGC+TGG 0.556205 2_4:+5473762 Msa0310660:five_prime_UTR
AGACAGTCCCTTGTAAGGGC+AGG 0.558512 2_4:-5475482 None:intergenic
GAGAAGGTGGTCACTAACTT+GGG 0.558654 2_4:+5472773 Msa0310660:five_prime_UTR
TGCTTCTGCCGTGAAGCACA+TGG 0.559329 2_4:+5473723 Msa0310660:five_prime_UTR
ACACCGGGTGGTGTAACGCC+TGG 0.559480 2_4:+5471036 Msa0310660:five_prime_UTR
CGTACCAAATTCATTATCTC+CGG 0.559808 2_4:-5470527 None:intergenic
TACTGAAGAAGAAGAAACTC+AGG 0.561160 2_4:+5470423 Msa0310660:five_prime_UTR
GATGCTATGTTTCCACAAGA+AGG 0.561803 2_4:+5471366 Msa0310660:five_prime_UTR
GGGAGAGGGATATTGAAGAG+AGG 0.562525 2_4:+5471316 Msa0310660:five_prime_UTR
CAGGACATCCTGTGGACCGA+TGG 0.563113 2_4:-5473419 None:intergenic
AGACTACTATGCCCGTGTTG+AGG 0.563257 2_4:+5471911 Msa0310660:five_prime_UTR
CCACCAGGCGTTACACCACC+CGG 0.565365 2_4:-5471039 None:intergenic
GGCGCAGTTGTAAACTCACT+CGG 0.566308 2_4:+5472902 Msa0310660:five_prime_UTR
ATGCTTAAGGCACACAAGAA+GGG 0.566666 2_4:+5473352 Msa0310660:five_prime_UTR
CCACCAGGTGTAACACCACC+AGG 0.567246 2_4:-5471054 None:intergenic
TTGCTACACCTACGCCGTTG+GGG 0.568070 2_4:+5471451 Msa0310660:five_prime_UTR
AGCAAATCACACACTATGCA+AGG 0.568398 2_4:-5475317 None:intergenic
GCCGTGAAGCACATGGCACT+GGG 0.568760 2_4:+5473730 Msa0310660:five_prime_UTR
TTTCACCAATATACTCAAAG+AGG 0.569856 2_4:-5473618 None:intergenic
GACTGTCTGCCTTCAAAATG+GGG 0.570292 2_4:+5475497 Msa0310660:CDS
ATGAATTTGGTACGTCTCGA+AGG 0.570897 2_4:+5470536 Msa0310660:five_prime_UTR
AGGCTCGCGAGTTTGGTGCT+GGG 0.571443 2_4:+5471721 Msa0310660:five_prime_UTR
CTGACAGACAGCCTTCAAGA+AGG 0.572236 2_4:-5472093 None:intergenic
GAATAGGCATGAGAAAGTCC+AGG 0.573723 2_4:+5473234 Msa0310660:five_prime_UTR
GACACCGACGCCGGGGAGGT+TGG 0.573817 2_4:+5470999 Msa0310660:five_prime_UTR
GATTTCATCATCGGAAGCCA+TGG 0.575011 2_4:-5470278 None:intergenic
TCCTGGGAGGAGGAATAGAT+GGG 0.575435 2_4:+5470972 Msa0310660:five_prime_UTR
GCCCCATCTGAGATCTCTTG+TGG 0.575595 2_4:+5472196 Msa0310660:five_prime_UTR
TCAAGCTCTTCGTCAGTCAA+AGG 0.575623 2_4:-5471345 None:intergenic
GATGTTCCTAAAGAAGCTCC+TGG 0.575849 2_4:+5471519 Msa0310660:five_prime_UTR
GAAGAGACAAAGATCGAGAT+GGG 0.576323 2_4:+5471128 Msa0310660:five_prime_UTR
CTAATCTCAGTAAAGCTGCT+GGG 0.576518 2_4:+5471949 Msa0310660:five_prime_UTR
GTAGCATCAATTACTCTCCC+AGG 0.576538 2_4:-5470949 None:intergenic
ATTAAGAAGCAACTAGAGAG+AGG 0.576838 2_4:-5475836 None:intergenic
GGCTGCGCCTGTGCAGGAGA+AGG 0.577891 2_4:+5470771 Msa0310660:five_prime_UTR
ATCGAGATGGGATGAAACAC+CGG 0.580369 2_4:+5471140 Msa0310660:five_prime_UTR
CAACAGCAATTCTCGAAATG+AGG 0.581374 2_4:-5473018 None:intergenic
GATGAAACACCGGCTACTAT+GGG 0.582461 2_4:+5471150 Msa0310660:five_prime_UTR
ACATGTGATAAATGCTGTGA+TGG 0.582632 2_4:+5473831 Msa0310660:five_prime_UTR
GGAGAACTGTATTGACCTTG+TGG 0.582863 2_4:+5473255 Msa0310660:five_prime_UTR
TGCTGCTGGTGAGAAAACGC+CGG 0.582900 2_4:+5470633 Msa0310660:five_prime_UTR
AATCGGAGCAATTACAGGAC+CGG 0.583315 2_4:-5470488 None:intergenic
CATCACATTAGCATCATCAC+TGG 0.583438 2_4:-5472867 None:intergenic
GTAAGAAATCTTGGCAAGCT+CGG 0.583586 2_4:+5472117 Msa0310660:five_prime_UTR
AAGCAGTGTGTGAGCACCGA+GGG 0.584845 2_4:+5472533 Msa0310660:five_prime_UTR
TGCCATGAGGAACAATTGAT+GGG 0.585856 2_4:+5473052 Msa0310660:five_prime_UTR
TCAGAATCAACCAACCTCCC+CGG 0.586207 2_4:-5471009 None:intergenic
GGATTCGAATGCGACGACAC+CGG 0.587081 2_4:+5470903 Msa0310660:five_prime_UTR
CCAGGTGTATACGCAGCAGC+AGG 0.587184 2_4:-5471201 None:intergenic
GCATCCCAAGTAGCACCACC+AGG 0.587445 2_4:-5471069 None:intergenic
TGACAGACAGCCTTCAAGAA+GGG 0.587819 2_4:-5472092 None:intergenic
TCAACCAACCTCCCCGGCGT+CGG 0.588537 2_4:-5471003 None:intergenic
GAGAACTGTATTGACCTTGT+GGG 0.588815 2_4:+5473256 Msa0310660:five_prime_UTR
TTGATGCTACTCCTGGGAGG+AGG 0.589392 2_4:+5470962 Msa0310660:five_prime_UTR
TATTTCCCTCCCCTCAACAC+GGG 0.589548 2_4:-5471922 None:intergenic
GTTGATTCTGATGCTACACC+GGG 0.590223 2_4:+5471021 Msa0310660:five_prime_UTR
TGTGCTCATCCTCTAGTGAT+GGG 0.590227 2_4:-5474011 None:intergenic
AGAATCAACAGCAGAAGAGG+AGG 0.592190 2_4:+5470806 Msa0310660:five_prime_UTR
CAGAGCAGTATAATTTGTTG+AGG 0.592782 2_4:+5471292 Msa0310660:five_prime_UTR
CTAATCGGCACATATGAAGC+GGG 0.592830 2_4:-5471408 None:intergenic
TACCTGCCAGAGAATGGATG+AGG 0.593216 2_4:+5473308 Msa0310660:five_prime_UTR
AAGAAACTACAAGCAACTTG+TGG 0.594902 2_4:+5472637 Msa0310660:five_prime_UTR
ACTGTATTGACCTTGTGGGT+AGG 0.597148 2_4:+5473260 Msa0310660:five_prime_UTR
TATTAGGCAACACCGTGGTA+AGG 0.597389 2_4:+5472358 Msa0310660:five_prime_UTR
ATCCTCTAGTGATGGGTATG+CGG 0.597770 2_4:-5474004 None:intergenic
GACCCATCAATTGTTCCTCA+TGG 0.598532 2_4:-5473054 None:intergenic
CCTGCTGCTGCGTATACACC+TGG 0.598811 2_4:+5471201 Msa0310660:five_prime_UTR
GCAGAAGAGGAGGAATAGAT+GGG 0.600043 2_4:+5470816 Msa0310660:five_prime_UTR
CATGGAAACTATTGAGAAGG+TGG 0.601383 2_4:+5472760 Msa0310660:five_prime_UTR
CAGTGCTGGCAAAACTGTGA+AGG 0.601842 2_4:-5473533 None:intergenic
AGGCAGACAGTCCCTTGTAA+GGG 0.602291 2_4:-5475486 None:intergenic
ACTATGCCCGTGTTGAGGGG+AGG 0.602376 2_4:+5471916 Msa0310660:five_prime_UTR
CTACTCCTAAGCTTAGTGGC+GGG 0.602581 2_4:+5471091 Msa0310660:five_prime_UTR
GTTAAATAACAAGAGTGCAA+AGG 0.602837 2_4:+5472976 Msa0310660:five_prime_UTR
AGCGGAGTCCCCAACGGCGT+AGG 0.603362 2_4:-5471459 None:intergenic
GGTCATGGAAACTATTGAGA+AGG 0.604849 2_4:+5472757 Msa0310660:five_prime_UTR
GGAAGCCATTGAAGGGATGA+GGG 0.604873 2_4:+5473852 Msa0310660:five_prime_UTR
CAGAATCAGAATCTGGAGGA+AGG 0.608189 2_4:+5470841 Msa0310660:five_prime_UTR
AGAAGAAGAAACTCAGGATG+CGG 0.609736 2_4:+5470429 Msa0310660:five_prime_UTR
GGAAGTGTAACACCATTACC+TGG 0.609752 2_4:+5471171 Msa0310660:five_prime_UTR
GTTACACTTCCCATAGTAGC+CGG 0.613198 2_4:-5471159 None:intergenic
GTATATTGGTGAAATGGGAA+AGG 0.614596 2_4:+5473627 Msa0310660:five_prime_UTR
GGCAGTATCCGGTTAAACAA+AGG 0.615778 2_4:-5471744 None:intergenic
GAGTAATTGATGCTACTCCT+GGG 0.615877 2_4:+5470956 Msa0310660:five_prime_UTR
GATATCAGTTCTAATATACT+CGG 0.616544 2_4:-5472564 None:intergenic
ATGAGAGCATCCTCAAGCAA+AGG 0.616768 2_4:-5473670 None:intergenic
CCCTGCCCGGAAAGTTAGGG+AGG 0.616795 2_4:+5473927 Msa0310660:five_prime_UTR
AGATTTGTGGTACCATCAAG+TGG 0.616908 2_4:+5472951 Msa0310660:five_prime_UTR
TGAGGATGCTCTCATGGACA+GGG 0.617031 2_4:+5473678 Msa0310660:five_prime_UTR
ACGCCTGGTGGTGTTACACC+TGG 0.617245 2_4:+5471051 Msa0310660:five_prime_UTR
TTATTTCCCTCCCCTCAACA+CGG 0.617901 2_4:-5471923 None:intergenic
CCTTGTAAAGCACCAGGTGT+AGG 0.618017 2_4:-5471258 None:intergenic
ATACTCGGCTTCCACACCCT+CGG 0.619507 2_4:-5472549 None:intergenic
TTTACCTTTGGTCTACAGTG+TGG 0.619755 2_4:+5475430 Msa0310660:CDS
AAGGTAAACTTTGAGAACAA+TGG 0.621013 2_4:-5475415 None:intergenic
GCCGTAAAGATCTGTGTCGA+AGG 0.621514 2_4:-5470362 None:intergenic
GGGATGCTACTCCAACTCCT+GGG 0.623860 2_4:+5470932 Msa0310660:five_prime_UTR
GGAGTAGCATCCCATCTCCC+CGG 0.624066 2_4:-5470922 None:intergenic
GCTGTGATGGAAGCCATTGA+AGG 0.626195 2_4:+5473844 Msa0310660:five_prime_UTR
GTGTTGAAGCCACTGTGGAA+GGG 0.626540 2_4:+5472335 Msa0310660:five_prime_UTR
CTACTTTGGAGGACCAAGAG+AGG 0.627256 2_4:+5471781 Msa0310660:five_prime_UTR
TCTTCTGGAATCTGATAAAG+CGG 0.627367 2_4:-5471477 None:intergenic
CCACCAACAGGAGTAACACC+AGG 0.627500 2_4:-5471219 None:intergenic
AACGACCCTTGTAAAGCACC+AGG 0.628494 2_4:-5471264 None:intergenic
CTACTATGATTGCTGCCATG+AGG 0.628805 2_4:+5471976 Msa0310660:five_prime_UTR
ACTACTATGCCCGTGTTGAG+GGG 0.629824 2_4:+5471913 Msa0310660:five_prime_UTR
CAGAACAATAACAATAACCA+TGG 0.631355 2_4:+5470261 Msa0310660:five_prime_UTR
TCAAAACTTTCAATACCGTA+GGG 0.631505 2_4:-5472308 None:intergenic
GCGCAGTTGTAAACTCACTC+GGG 0.632030 2_4:+5472903 Msa0310660:five_prime_UTR
TTGTAATCTTTGCATGACAA+TGG 0.633057 2_4:+5475672 Msa0310660:three_prime_UTR
TGTCTCTGCAACAATAGCAA+TGG 0.633675 2_4:-5473503 None:intergenic
CTGTGATGGAAGCCATTGAA+GGG 0.634079 2_4:+5473845 Msa0310660:five_prime_UTR
GTTGAGATAGCAAACAAGGT+TGG 0.634493 2_4:+5472668 Msa0310660:five_prime_UTR
GAGTGAACCTTACAGGCGAA+TGG 0.634771 2_4:+5472736 Msa0310660:five_prime_UTR
ATAATCTCAAGGTGCAGGAG+AGG 0.636931 2_4:+5473455 Msa0310660:five_prime_UTR
AAAGTAGGCTGCATAAGCAA+CGG 0.637377 2_4:-5471765 None:intergenic
ATCGGCACATATGAAGCGGG+AGG 0.639925 2_4:-5471405 None:intergenic
CCCTAACTTTCCGGGCAGGG+TGG 0.640804 2_4:-5473924 None:intergenic
ATAACAAGAGTGCAAAGGTG+AGG 0.641690 2_4:+5472981 Msa0310660:five_prime_UTR
TTCCACAAGAGATCTCAGAT+GGG 0.642677 2_4:-5472198 None:intergenic
CCAACAGGAAGCATGTGAGA+AGG 0.643377 2_4:-5475155 None:intergenic
AGATATGAAGTGTTTCGTGA+AGG 0.643540 2_4:-5470213 None:intergenic
GTCAAAACTTTCAATACCGT+AGG 0.643954 2_4:-5472309 None:intergenic
GCAGCAGCAGGTGTAGCACC+AGG 0.648033 2_4:-5471189 None:intergenic
TAAACCACACTGTAGACCAA+AGG 0.648591 2_4:-5475434 None:intergenic
TGCCGCATACCCATCACTAG+AGG 0.648920 2_4:+5474002 Msa0310660:five_prime_UTR
GAATTGGCTACACCTACACC+TGG 0.650303 2_4:+5471246 Msa0310660:five_prime_UTR
TGATAAAGCGGAGTCCCCAA+CGG 0.650539 2_4:-5471465 None:intergenic
TGCAATACCTGCCCTTACAA+GGG 0.651094 2_4:+5475475 Msa0310660:CDS
GGAAGCAAATCCTTAATCGG+TGG 0.651765 2_4:-5473190 None:intergenic
AATCAGAATCTGGAGGAAGG+TGG 0.653087 2_4:+5470844 Msa0310660:five_prime_UTR
TAGTCTTCATCAATCAAAAG+GGG 0.654336 2_4:-5471894 None:intergenic
AGAGTTGCCAGGACATCCTG+TGG 0.655314 2_4:-5473427 None:intergenic
ATGAGACACCGACGCCGGGG+AGG 0.656594 2_4:+5470995 Msa0310660:five_prime_UTR
AACGGTTGAGATAGCAAACA+AGG 0.658749 2_4:+5472664 Msa0310660:five_prime_UTR
CAAGCAACTTGTGGAGACAA+CGG 0.660815 2_4:+5472646 Msa0310660:five_prime_UTR
TCCACAAGAGATCTCAGATG+GGG 0.662742 2_4:-5472197 None:intergenic
GCTACTCCTAAGCTTAGTGG+CGG 0.664573 2_4:+5471090 Msa0310660:five_prime_UTR
GGGTAGGATTGCTGATCGTG+GGG 0.665788 2_4:+5473276 Msa0310660:five_prime_UTR
TCGGCACATATGAAGCGGGA+GGG 0.667662 2_4:-5471404 None:intergenic
AGTGCTGGCAAAACTGTGAA+GGG 0.670578 2_4:-5473532 None:intergenic
ATGGGATGAGACACCGACGC+CGG 0.670705 2_4:+5470990 Msa0310660:five_prime_UTR
GGATCAGAATCAGAATCTGG+AGG 0.671293 2_4:+5470837 Msa0310660:five_prime_UTR
TGCCGATTAGGACACCTGCA+AGG 0.675865 2_4:+5471421 Msa0310660:five_prime_UTR
CTACACCTGGTGCTTTACAA+GGG 0.676164 2_4:+5471259 Msa0310660:five_prime_UTR
TGCCTAATACCCTTCCACAG+TGG 0.684739 2_4:-5472344 None:intergenic
TTTGTGGTACCATCAAGTGG+AGG 0.686360 2_4:+5472954 Msa0310660:five_prime_UTR
TTTGAATGATGAGAATCAGA+AGG 0.688179 2_4:+5472235 Msa0310660:five_prime_UTR
GATCATCTGATATTGATGCA+CGG 0.689708 2_4:+5472795 Msa0310660:five_prime_UTR
CCGGGTGGTGTAACGCCTGG+TGG 0.692520 2_4:+5471039 Msa0310660:five_prime_UTR
CCTGGTGGTGTTACACCTGG+TGG 0.693980 2_4:+5471054 Msa0310660:five_prime_UTR
ATTAACAGTACTAACGACGC+CGG 0.702421 2_4:+5470508 Msa0310660:five_prime_UTR
GGGATGAGACACCGACGCCG+GGG 0.702741 2_4:+5470992 Msa0310660:five_prime_UTR
TTGATGGTACCACAAATCTG+AGG 0.705271 2_4:-5472947 None:intergenic
GATTCTGATGCTACACCGGG+TGG 0.710329 2_4:+5471024 Msa0310660:five_prime_UTR
TAATTGATGCTACTCCTGGG+AGG 0.712647 2_4:+5470959 Msa0310660:five_prime_UTR
GAACATCAAATTGCTGACCA+CGG 0.713698 2_4:-5471503 None:intergenic
GATCAGCAATCCTACCCACA+AGG 0.716041 2_4:-5473270 None:intergenic
ACGCAGCCAGCACCTTACCA+CGG 0.717063 2_4:-5472370 None:intergenic
GTGAAGATGATTACCGGAGA+CGG 0.717111 2_4:+5470569 Msa0310660:five_prime_UTR
GTTCCTAAAGAAGCTCCTGG+TGG 0.719823 2_4:+5471522 Msa0310660:five_prime_UTR
ACTCGGTGTTGAAGCCACTG+TGG 0.723264 2_4:+5472330 Msa0310660:five_prime_UTR
GAATCGTGTGTGCACTACTG+TGG 0.732596 2_4:+5473480 Msa0310660:five_prime_UTR
GAAGCAGTGTGTGAGCACCG+AGG 0.745244 2_4:+5472532 Msa0310660:five_prime_UTR
ATTCGAATGCGACGACACCG+GGG 0.746302 2_4:+5470905 Msa0310660:five_prime_UTR
AGAATGGTACACCACCGCAG+AGG 0.748772 2_4:+5471670 Msa0310660:five_prime_UTR
CAGATTCCAGAAGAGAACCG+TGG 0.750310 2_4:+5471486 Msa0310660:five_prime_UTR
GACGCAGCAAAGTTTCTACG+AGG 0.759184 2_4:-5470460 None:intergenic
TGTCATGAAGCAGTGCCATG+AGG 0.764533 2_4:+5473039 Msa0310660:five_prime_UTR
AAGGGTATTAGGCAACACCG+TGG 0.809985 2_4:+5472353 Msa0310660:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATGACTTAATAAAAAAT+TGG - chr2_4:5474551-5474570 None:intergenic 10.0%
!!! ATTTTTTATTAAGTCATTAT+AGG + chr2_4:5474551-5474570 Msa0310660:intron 10.0%
!!! ATAAATTTTTTTTTTTATGC+AGG + chr2_4:5475602-5475621 Msa0310660:intron 10.0%
!!! TCTTCTTAAATATTTTACTA+TGG + chr2_4:5474757-5474776 Msa0310660:intron 15.0%
!! TGATAGAGTTCTTTATAAAT+TGG + chr2_4:5471824-5471843 Msa0310660:five_prime_UTR 20.0%
!! TCTTTATAAATTGGATGAAT+TGG + chr2_4:5471833-5471852 Msa0310660:five_prime_UTR 20.0%
!! ATAACATTGATGAATATGTT+AGG + chr2_4:5472009-5472028 Msa0310660:five_prime_UTR 20.0%
!! ATTTATAACTCTCTGTATAT+TGG + chr2_4:5473961-5473980 Msa0310660:five_prime_UTR 20.0%
!! ACATTACAGGAAAAAAATAA+GGG - chr2_4:5474261-5474280 None:intergenic 20.0%
!! AACATTACAGGAAAAAAATA+AGG - chr2_4:5474262-5474281 None:intergenic 20.0%
!!! AATCCTTTTATGAAATAGTT+TGG + chr2_4:5474363-5474382 Msa0310660:intron 20.0%
!! AAACCAAACTATTTCATAAA+AGG - chr2_4:5474369-5474388 None:intergenic 20.0%
!!! TTTTATGAAATAGTTTGGTT+TGG + chr2_4:5474368-5474387 Msa0310660:intron 20.0%
!!! TTTATGAAATAGTTTGGTTT+GGG + chr2_4:5474369-5474388 Msa0310660:intron 20.0%
!! ATGACTTAATAAAAAATTGG+AGG - chr2_4:5474548-5474567 None:intergenic 20.0%
!!! GTATATGATTAGTACTTTTA+AGG - chr2_4:5474627-5474646 None:intergenic 20.0%
!! GTAAAATAGAATGAAATCAT+GGG - chr2_4:5474785-5474804 None:intergenic 20.0%
!! AGTAAAATAGAATGAAATCA+TGG - chr2_4:5474786-5474805 None:intergenic 20.0%
!! AGAAAAATGGAATAAAATCA+AGG - chr2_4:5474819-5474838 None:intergenic 20.0%
!!! TTGATTTTATTCCATTTTTC+TGG + chr2_4:5474818-5474837 Msa0310660:intron 20.0%
!! AAATGTGATTTCTTTATCAT+AGG + chr2_4:5475862-5475881 Msa0310660:three_prime_UTR 20.0%
!! CTGAAGATTATCAGTATTTT+GGG + chr2_4:5471562-5471581 Msa0310660:five_prime_UTR 25.0%
!! TGAAGATTATCAGTATTTTG+GGG + chr2_4:5471563-5471582 Msa0310660:five_prime_UTR 25.0%
! ATAAATTGGATGAATTGGTT+CGG + chr2_4:5471838-5471857 Msa0310660:five_prime_UTR 25.0%
!! ATTTTCTTCATTTCTTCATC+AGG - chr2_4:5472497-5472516 None:intergenic 25.0%
!!! GAAGAAAATTGTTTTGAAAG+TGG + chr2_4:5472508-5472527 Msa0310660:five_prime_UTR 25.0%
!! GATATCAGTTCTAATATACT+CGG - chr2_4:5472567-5472586 None:intergenic 25.0%
! AACTCTATTGAATAATCTCA+AGG + chr2_4:5473444-5473463 Msa0310660:five_prime_UTR 25.0%
! TTTGAGTATATTGGTGAAAT+GGG + chr2_4:5473622-5473641 Msa0310660:five_prime_UTR 25.0%
!! AAACTTTTTGCACAAAAAAG+AGG - chr2_4:5474152-5474171 None:intergenic 25.0%
! TATTTCATACACAGATTCAA+CGG - chr2_4:5474218-5474237 None:intergenic 25.0%
!!! TGTATGTCTTTTTTCTTTCT+TGG + chr2_4:5474333-5474352 Msa0310660:intron 25.0%
! TTGGTTATAAATCAATCTGT+CGG + chr2_4:5474509-5474528 Msa0310660:intron 25.0%
! GTAAACAATCATGCTATTAA+TGG - chr2_4:5474906-5474925 None:intergenic 25.0%
! ACACATTTGATAGGTAATTA+TGG - chr2_4:5474993-5475012 None:intergenic 25.0%
! TTTGAATGTACACATTTGAT+AGG - chr2_4:5475002-5475021 None:intergenic 25.0%
!!! GTTTAAAATGTTACTTTGAG+AGG + chr2_4:5475771-5475790 Msa0310660:three_prime_UTR 25.0%
!! ATTGTTATTGTTCTGGTTCA+AGG - chr2_4:5470256-5470275 None:intergenic 30.0%
! CATGGTTATTGTTATTGTTC+TGG - chr2_4:5470263-5470282 None:intergenic 30.0%
CAGAACAATAACAATAACCA+TGG + chr2_4:5470261-5470280 Msa0310660:five_prime_UTR 30.0%
TAATCTTCAGGCTTCATAAA+AGG - chr2_4:5471552-5471571 None:intergenic 30.0%
CCAAAATACTGATAATCTTC+AGG - chr2_4:5471564-5471583 None:intergenic 30.0%
! CCTGAAGATTATCAGTATTT+TGG + chr2_4:5471561-5471580 Msa0310660:five_prime_UTR 30.0%
! CTTTTGCTTAAAGTGAAGAA+TGG + chr2_4:5471654-5471673 Msa0310660:five_prime_UTR 30.0%
ACAAGAATCTTATGCACATA+AGG - chr2_4:5471864-5471883 None:intergenic 30.0%
TAGTCTTCATCAATCAAAAG+GGG - chr2_4:5471897-5471916 None:intergenic 30.0%
GTAGTCTTCATCAATCAAAA+GGG - chr2_4:5471898-5471917 None:intergenic 30.0%
AGTAGTCTTCATCAATCAAA+AGG - chr2_4:5471899-5471918 None:intergenic 30.0%
TCATCAATGTTATCTATGTC+AGG - chr2_4:5472002-5472021 None:intergenic 30.0%
TTTGAATGATGAGAATCAGA+AGG + chr2_4:5472235-5472254 Msa0310660:five_prime_UTR 30.0%
TCAAAACTTTCAATACCGTA+GGG - chr2_4:5472311-5472330 None:intergenic 30.0%
AGTATAATAGCTGGCATATA+AGG - chr2_4:5472435-5472454 None:intergenic 30.0%
ATATGCCAGCTATTATACTA+AGG + chr2_4:5472436-5472455 Msa0310660:five_prime_UTR 30.0%
AAGTCATGCTTATTCTGATT+CGG + chr2_4:5472459-5472478 Msa0310660:five_prime_UTR 30.0%
! AGAAGTTTCTGAAAAACTCA+GGG - chr2_4:5472592-5472611 None:intergenic 30.0%
!! TGAGTTTTTCAGAAACTTCT+GGG + chr2_4:5472592-5472611 Msa0310660:five_prime_UTR 30.0%
ATGCTAATGTGATGCTTAAT+GGG + chr2_4:5472876-5472895 Msa0310660:five_prime_UTR 30.0%
! GTTAAATAACAAGAGTGCAA+AGG + chr2_4:5472976-5472995 Msa0310660:five_prime_UTR 30.0%
GTTGTCTTGTATGAATATCT+TGG + chr2_4:5473085-5473104 Msa0310660:five_prime_UTR 30.0%
AAAATTGAACCTAGAACTTC+GGG - chr2_4:5473121-5473140 None:intergenic 30.0%
CAAAATTGAACCTAGAACTT+CGG - chr2_4:5473122-5473141 None:intergenic 30.0%
!!! GAAGTTCTAGGTTCAATTTT+GGG + chr2_4:5473121-5473140 Msa0310660:five_prime_UTR 30.0%
AAGTCGATCGTTAATGTTAT+TGG + chr2_4:5473151-5473170 Msa0310660:five_prime_UTR 30.0%
!! TGACTCCAATTTTGAAGAAT+AGG + chr2_4:5473218-5473237 Msa0310660:five_prime_UTR 30.0%
TCATGCCTATTCTTCAAAAT+TGG - chr2_4:5473226-5473245 None:intergenic 30.0%
TCTTTCCTCTTTGAGTATAT+TGG + chr2_4:5473613-5473632 Msa0310660:five_prime_UTR 30.0%
TTTCACCAATATACTCAAAG+AGG - chr2_4:5473621-5473640 None:intergenic 30.0%
CTTTGAGTATATTGGTGAAA+TGG + chr2_4:5473621-5473640 Msa0310660:five_prime_UTR 30.0%
GGAGAAGTTTCAAATATGTT+TGG - chr2_4:5473811-5473830 None:intergenic 30.0%
GATTGCAATCATCTATGTAT+TGG + chr2_4:5474074-5474093 Msa0310660:exon 30.0%
! CTCTCTGAATTGTAGTATTT+TGG + chr2_4:5474103-5474122 Msa0310660:intron 30.0%
GAGGAACATGCATAAAAATT+AGG - chr2_4:5474133-5474152 None:intergenic 30.0%
GTTGTTAATCTGCAATTGAA+TGG + chr2_4:5474192-5474211 Msa0310660:intron 30.0%
TAATGTTGTGAATGCTGATA+AGG + chr2_4:5474275-5474294 Msa0310660:intron 30.0%
! GTATGTCTTTTTCTTCTTCT+TGG + chr2_4:5474490-5474509 Msa0310660:intron 30.0%
AAAAATTGGAGGATACAGTA+CGG - chr2_4:5474537-5474556 None:intergenic 30.0%
!!! GTGGCTATTTTGACATTTTT+TGG - chr2_4:5474655-5474674 None:intergenic 30.0%
! GTTGGTCAAAGTTTTTATTG+TGG - chr2_4:5474867-5474886 None:intergenic 30.0%
!! AATCATGCTATTAATGGACT+TGG - chr2_4:5474900-5474919 None:intergenic 30.0%
ATAATGACCAAATTGGAAAG+AGG - chr2_4:5475266-5475285 None:intergenic 30.0%
GCTGTTTATAATGACCAAAT+TGG - chr2_4:5475273-5475292 None:intergenic 30.0%
TTTGGTCATTATAAACAGCT+TGG + chr2_4:5475274-5475293 Msa0310660:CDS 30.0%
AGCTTGGATAGTGAATTTAT+AGG + chr2_4:5475290-5475309 Msa0310660:CDS 30.0%
! AAGGTAAACTTTGAGAACAA+TGG - chr2_4:5475418-5475437 None:intergenic 30.0%
TTGTTCTCAAAGTTTACCTT+TGG + chr2_4:5475418-5475437 Msa0310660:CDS 30.0%
TTGTAATCTTTGCATGACAA+TGG + chr2_4:5475672-5475691 Msa0310660:three_prime_UTR 30.0%
! GTTATGTTTTCATTCGCTTA+AGG + chr2_4:5475732-5475751 Msa0310660:three_prime_UTR 30.0%
ACAAGTATTATATGATAGCC+AGG - chr2_4:5475806-5475825 None:intergenic 30.0%
! TGGCTGAATTTAAGATTTGT+AGG - chr2_4:5475920-5475939 None:intergenic 30.0%
! AGATATGAAGTGTTTCGTGA+AGG - chr2_4:5470216-5470235 None:intergenic 35.0%
TCACGAAACACTTCATATCT+AGG + chr2_4:5470216-5470235 Msa0310660:five_prime_UTR 35.0%
CACGAAACACTTCATATCTA+GGG + chr2_4:5470217-5470236 Msa0310660:five_prime_UTR 35.0%
GCAAGAATTACGTAAGAAGA+TGG + chr2_4:5470309-5470328 Msa0310660:five_prime_UTR 35.0%
TACTGAAGAAGAAGAAACTC+AGG + chr2_4:5470423-5470442 Msa0310660:five_prime_UTR 35.0%
CGTACCAAATTCATTATCTC+CGG - chr2_4:5470530-5470549 None:intergenic 35.0%
ATTGAATCAGATTCTTTCGC+CGG + chr2_4:5470594-5470613 Msa0310660:five_prime_UTR 35.0%
! TCAGCATAACTCCTTTTAGA+CGG - chr2_4:5470661-5470680 None:intergenic 35.0%
! GTTGATTTCGAAGAAGAAGA+AGG + chr2_4:5470729-5470748 Msa0310660:five_prime_UTR 35.0%
AAAAGGCTAAGACTTCTGAT+TGG + chr2_4:5470872-5470891 Msa0310660:five_prime_UTR 35.0%
AAAGGCTAAGACTTCTGATT+GGG + chr2_4:5470873-5470892 Msa0310660:five_prime_UTR 35.0%
CTCAACAAATTATACTGCTC+TGG - chr2_4:5471294-5471313 None:intergenic 35.0%
!! CAGAGCAGTATAATTTGTTG+AGG + chr2_4:5471292-5471311 Msa0310660:five_prime_UTR 35.0%
!! AGCAGTATAATTTGTTGAGG+TGG + chr2_4:5471295-5471314 Msa0310660:five_prime_UTR 35.0%
!! GCAGTATAATTTGTTGAGGT+GGG + chr2_4:5471296-5471315 Msa0310660:five_prime_UTR 35.0%
ATGCTATGTTTCCACAAGAA+GGG + chr2_4:5471367-5471386 Msa0310660:five_prime_UTR 35.0%
AAAACCTTATACCCTTCTTG+TGG - chr2_4:5471381-5471400 None:intergenic 35.0%
!! ACAAGAAGGGTATAAGGTTT+TGG + chr2_4:5471380-5471399 Msa0310660:five_prime_UTR 35.0%
!! TCTTCTGGAATCTGATAAAG+CGG - chr2_4:5471480-5471499 None:intergenic 35.0%
GTTGAATGAAGAGAATGAAG+AGG + chr2_4:5471590-5471609 Msa0310660:five_prime_UTR 35.0%
! TTTGAGGCAGTTAACTGATA+AGG + chr2_4:5471701-5471720 Msa0310660:five_prime_UTR 35.0%
TCTGTCAGAGTAAGAAATCT+TGG + chr2_4:5472108-5472127 Msa0310660:five_prime_UTR 35.0%
!!! CAGCAAATTGCCATTTTGAT+TGG + chr2_4:5472161-5472180 Msa0310660:five_prime_UTR 35.0%
CTTGTGGAAATTATAGAGCA+TGG + chr2_4:5472212-5472231 Msa0310660:five_prime_UTR 35.0%
GTCAAAACTTTCAATACCGT+AGG - chr2_4:5472312-5472331 None:intergenic 35.0%
!!! CGGTATTGAAAGTTTTGACT+CGG + chr2_4:5472313-5472332 Msa0310660:five_prime_UTR 35.0%
!! CTGCGTTTTTGAAAGCAATT+GGG + chr2_4:5472387-5472406 Msa0310660:five_prime_UTR 35.0%
GACTTCCTTAGTATAATAGC+TGG - chr2_4:5472444-5472463 None:intergenic 35.0%
AGTCATGCTTATTCTGATTC+GGG + chr2_4:5472460-5472479 Msa0310660:five_prime_UTR 35.0%
! CAGAAGTTTCTGAAAAACTC+AGG - chr2_4:5472593-5472612 None:intergenic 35.0%
!! CTGAGTTTTTCAGAAACTTC+TGG + chr2_4:5472591-5472610 Msa0310660:five_prime_UTR 35.0%
! TTTTCAGAAACTTCTGGGTT+AGG + chr2_4:5472597-5472616 Msa0310660:five_prime_UTR 35.0%
AAGAAACTACAAGCAACTTG+TGG + chr2_4:5472637-5472656 Msa0310660:five_prime_UTR 35.0%
GATCATCTGATATTGATGCA+CGG + chr2_4:5472795-5472814 Msa0310660:five_prime_UTR 35.0%
GATGCTAATGTGATGCTTAA+TGG + chr2_4:5472875-5472894 Msa0310660:five_prime_UTR 35.0%
!! AATGTGATGCTTAATGGGTT+CGG + chr2_4:5472881-5472900 Msa0310660:five_prime_UTR 35.0%
GTTATTTAACCTCCACTTGA+TGG - chr2_4:5472966-5472985 None:intergenic 35.0%
!!! CGAAGTTCTAGGTTCAATTT+TGG + chr2_4:5473120-5473139 Msa0310660:five_prime_UTR 35.0%
TTCAAAATTGGAGTCAACCT+GGG - chr2_4:5473214-5473233 None:intergenic 35.0%
GATTATTCAATAGAGTTGCC+AGG - chr2_4:5473441-5473460 None:intergenic 35.0%
ATTGAATAATCTCAAGGTGC+AGG + chr2_4:5473450-5473469 Msa0310660:five_prime_UTR 35.0%
GTATATTGGTGAAATGGGAA+AGG + chr2_4:5473627-5473646 Msa0310660:five_prime_UTR 35.0%
ATCACAGCATTTATCACATG+TGG - chr2_4:5473832-5473851 None:intergenic 35.0%
ACATGTGATAAATGCTGTGA+TGG + chr2_4:5473831-5473850 Msa0310660:five_prime_UTR 35.0%
GTTCTTAATTACTGTCTCCA+AGG + chr2_4:5473895-5473914 Msa0310660:five_prime_UTR 35.0%
ATCAGCATTCACAACATTAC+AGG - chr2_4:5474274-5474293 None:intergenic 35.0%
CACATAACTGGCAAAAAGAA+GGG - chr2_4:5474419-5474438 None:intergenic 35.0%
ACACATAACTGGCAAAAAGA+AGG - chr2_4:5474420-5474439 None:intergenic 35.0%
! TTTTTGCCAGTTATGTGTTG+TGG + chr2_4:5474422-5474441 Msa0310660:intron 35.0%
TACGGCAGATTAATAATCCT+CGG + chr2_4:5474452-5474471 Msa0310660:intron 35.0%
AAAATTGGAGGATACAGTAC+GGG - chr2_4:5474536-5474555 None:intergenic 35.0%
GATTGACAACATAGATGTCA+TGG + chr2_4:5474721-5474740 Msa0310660:intron 35.0%
TGAAGTCAGAACCAGAAAAA+TGG - chr2_4:5474832-5474851 None:intergenic 35.0%
! GGACTTGGTTCAATATTTGT+TGG - chr2_4:5474885-5474904 None:intergenic 35.0%
! ATTATGGCATTGAGTTACAG+TGG - chr2_4:5474977-5474996 None:intergenic 35.0%
TGTTCCTTTGTCAAAACTCA+TGG + chr2_4:5475048-5475067 Msa0310660:intron 35.0%
GTACTATGTTCTGTAGCAAT+TGG + chr2_4:5475572-5475591 Msa0310660:intron 35.0%
! AGATAGTACGAGACTGTTTT+CGG + chr2_4:5475710-5475729 Msa0310660:three_prime_UTR 35.0%
TATATGATAGCCAGGAAACT+CGG - chr2_4:5475798-5475817 None:intergenic 35.0%
ATTAAGAAGCAACTAGAGAG+AGG - chr2_4:5475839-5475858 None:intergenic 35.0%
CGTCTTCTCGATTTCATCAT+CGG - chr2_4:5470290-5470309 None:intergenic 40.0%
ACCTTCGACACAGATCTTTA+CGG + chr2_4:5470361-5470380 Msa0310660:five_prime_UTR 40.0%
TCTTCAGTAGCAGGAATTGA+AGG - chr2_4:5470412-5470431 None:intergenic 40.0%
GTTTCTTCTTCTTCAGTAGC+AGG - chr2_4:5470421-5470440 None:intergenic 40.0%
AGAAGAAGAAACTCAGGATG+CGG + chr2_4:5470429-5470448 Msa0310660:five_prime_UTR 40.0%
CTGTTAATCGGAGCAATTAC+AGG - chr2_4:5470496-5470515 None:intergenic 40.0%
GCGTCGTTAGTACTGTTAAT+CGG - chr2_4:5470508-5470527 None:intergenic 40.0%
ATTAACAGTACTAACGACGC+CGG + chr2_4:5470508-5470527 Msa0310660:five_prime_UTR 40.0%
ATGAATTTGGTACGTCTCGA+AGG + chr2_4:5470536-5470555 Msa0310660:five_prime_UTR 40.0%
TTGACCGTGAAGATGATTAC+CGG + chr2_4:5470563-5470582 Msa0310660:five_prime_UTR 40.0%
! TAACTCCTTTTAGACGGATC+CGG - chr2_4:5470655-5470674 None:intergenic 40.0%
TTCGAAGAAGAAGAAGGAAG+AGG + chr2_4:5470735-5470754 Msa0310660:five_prime_UTR 40.0%
ATGGGATCAGAATCAGAATC+TGG + chr2_4:5470834-5470853 Msa0310660:five_prime_UTR 40.0%
AGAGTAATTGATGCTACTCC+TGG + chr2_4:5470955-5470974 Msa0310660:five_prime_UTR 40.0%
GAGTAATTGATGCTACTCCT+GGG + chr2_4:5470956-5470975 Msa0310660:five_prime_UTR 40.0%
CATCTCGATCTTTGTCTCTT+CGG - chr2_4:5471129-5471148 None:intergenic 40.0%
GAAGAGACAAAGATCGAGAT+GGG + chr2_4:5471128-5471147 Msa0310660:five_prime_UTR 40.0%
!! ATAATTTGTTGAGGTGGGAG+AGG + chr2_4:5471301-5471320 Msa0310660:five_prime_UTR 40.0%
!! TAATTTGTTGAGGTGGGAGA+GGG + chr2_4:5471302-5471321 Msa0310660:five_prime_UTR 40.0%
GATGCTATGTTTCCACAAGA+AGG + chr2_4:5471366-5471385 Msa0310660:five_prime_UTR 40.0%
! GTTTCCACAAGAAGGGTATA+AGG + chr2_4:5471374-5471393 Msa0310660:five_prime_UTR 40.0%
GAACATCAAATTGCTGACCA+CGG - chr2_4:5471506-5471525 None:intergenic 40.0%
AAAGTAGGCTGCATAAGCAA+CGG - chr2_4:5471768-5471787 None:intergenic 40.0%
TAACCAAAAGATGCCTCTCT+TGG - chr2_4:5471797-5471816 None:intergenic 40.0%
!!! AGAGAGGCATCTTTTGGTTA+AGG + chr2_4:5471797-5471816 Msa0310660:five_prime_UTR 40.0%
TCTAATCTCAGTAAAGCTGC+TGG + chr2_4:5471948-5471967 Msa0310660:five_prime_UTR 40.0%
CTAATCTCAGTAAAGCTGCT+GGG + chr2_4:5471949-5471968 Msa0310660:five_prime_UTR 40.0%
TTCAAGAAGGGCAATAAAGC+AGG - chr2_4:5472083-5472102 None:intergenic 40.0%
! TGCTTTATTGCCCTTCTTGA+AGG + chr2_4:5472082-5472101 Msa0310660:five_prime_UTR 40.0%
GTAAGAAATCTTGGCAAGCT+CGG + chr2_4:5472117-5472136 Msa0310660:five_prime_UTR 40.0%
CACAGCACAACCAATCAAAA+TGG - chr2_4:5472174-5472193 None:intergenic 40.0%
TTCCACAAGAGATCTCAGAT+GGG - chr2_4:5472201-5472220 None:intergenic 40.0%
TTTCCACAAGAGATCTCAGA+TGG - chr2_4:5472202-5472221 None:intergenic 40.0%
!! GCTGCGTTTTTGAAAGCAAT+TGG + chr2_4:5472386-5472405 Msa0310660:five_prime_UTR 40.0%
TGGGTTTATCATTCCGTTGA+TGG + chr2_4:5472406-5472425 Msa0310660:five_prime_UTR 40.0%
GCATATAAGGCTTCCATCAA+CGG - chr2_4:5472422-5472441 None:intergenic 40.0%
! AGTTTCTGAAAAACTCAGGG+AGG - chr2_4:5472589-5472608 None:intergenic 40.0%
AACGGTTGAGATAGCAAACA+AGG + chr2_4:5472664-5472683 Msa0310660:five_prime_UTR 40.0%
GTTGAGATAGCAAACAAGGT+TGG + chr2_4:5472668-5472687 Msa0310660:five_prime_UTR 40.0%
!! GTTGGTGTTGCTGATATTGT+TGG + chr2_4:5472686-5472705 Msa0310660:five_prime_UTR 40.0%
AAGATGAGAGTGAACCTTAC+AGG + chr2_4:5472729-5472748 Msa0310660:five_prime_UTR 40.0%
GGTCATGGAAACTATTGAGA+AGG + chr2_4:5472757-5472776 Msa0310660:five_prime_UTR 40.0%
CATGGAAACTATTGAGAAGG+TGG + chr2_4:5472760-5472779 Msa0310660:five_prime_UTR 40.0%
ATCTGATATTGATGCACGGT+TGG + chr2_4:5472799-5472818 Msa0310660:five_prime_UTR 40.0%
!! TTGGAGGAGCTTTTGATTGA+TGG + chr2_4:5472818-5472837 Msa0310660:five_prime_UTR 40.0%
CATCACATTAGCATCATCAC+TGG - chr2_4:5472870-5472889 None:intergenic 40.0%
CCACAAATCTGAGGAAGATA+TGG - chr2_4:5472941-5472960 None:intergenic 40.0%
CCATATCTTCCTCAGATTTG+TGG + chr2_4:5472938-5472957 Msa0310660:five_prime_UTR 40.0%
! TTGATGGTACCACAAATCTG+AGG - chr2_4:5472950-5472969 None:intergenic 40.0%
AGATTTGTGGTACCATCAAG+TGG + chr2_4:5472951-5472970 Msa0310660:five_prime_UTR 40.0%
! ATAACAAGAGTGCAAAGGTG+AGG + chr2_4:5472981-5473000 Msa0310660:five_prime_UTR 40.0%
CAACAGCAATTCTCGAAATG+AGG - chr2_4:5473021-5473040 None:intergenic 40.0%
TGCCATGAGGAACAATTGAT+GGG + chr2_4:5473052-5473071 Msa0310660:five_prime_UTR 40.0%
! GAACAATTGATGGGTCATCT+TGG + chr2_4:5473061-5473080 Msa0310660:five_prime_UTR 40.0%
CTGGGAAGCAAATCCTTAAT+CGG - chr2_4:5473196-5473215 None:intergenic 40.0%
CTTCAAAATTGGAGTCAACC+TGG - chr2_4:5473215-5473234 None:intergenic 40.0%
! GAGAACTGTATTGACCTTGT+GGG + chr2_4:5473256-5473275 Msa0310660:five_prime_UTR 40.0%
TGAGCTTCTTGAGATGCTTA+AGG + chr2_4:5473339-5473358 Msa0310660:five_prime_UTR 40.0%
ATGCTTAAGGCACACAAGAA+GGG + chr2_4:5473352-5473371 Msa0310660:five_prime_UTR 40.0%
AGAGCTACTGTGAACACTTT+CGG + chr2_4:5473382-5473401 Msa0310660:five_prime_UTR 40.0%
GGATATATTGCGAAAGCCAT+CGG + chr2_4:5473403-5473422 Msa0310660:five_prime_UTR 40.0%
TGTCTCTGCAACAATAGCAA+TGG - chr2_4:5473506-5473525 None:intergenic 40.0%
! CCATTTTGCACGTTAAGTTC+TGG - chr2_4:5473577-5473596 None:intergenic 40.0%
CCAGAACTTAACGTGCAAAA+TGG + chr2_4:5473574-5473593 Msa0310660:five_prime_UTR 40.0%
! TCCATTTGCTGAACTATGTC+TGG + chr2_4:5473785-5473804 Msa0310660:five_prime_UTR 40.0%
AATTCTCAATCAGCACTGTG+TGG + chr2_4:5474307-5474326 Msa0310660:intron 40.0%
ATGTGTTGTGGATGCTGATA+CGG + chr2_4:5474434-5474453 Msa0310660:intron 40.0%
GGAACAAATGAAAGTTCAGC+AGG - chr2_4:5475034-5475053 None:intergenic 40.0%
!! ACGTCCATGAGTTTTGACAA+AGG - chr2_4:5475055-5475074 None:intergenic 40.0%
AAAACTCATGGACGTTCACA+TGG + chr2_4:5475060-5475079 Msa0310660:intron 40.0%
CAACTACAGTGACAAAAGCA+AGG - chr2_4:5475107-5475126 None:intergenic 40.0%
!! CTTGCTTTTGTCACTGTAGT+TGG + chr2_4:5475105-5475124 Msa0310660:intron 40.0%
GATTCAAGCATGACAACTGT+TGG + chr2_4:5475198-5475217 Msa0310660:CDS 40.0%
CACATGTCCTCTTTCCAATT+TGG + chr2_4:5475256-5475275 Msa0310660:CDS 40.0%
AGCAAATCACACACTATGCA+AGG - chr2_4:5475320-5475339 None:intergenic 40.0%
TTTACCTTTGGTCTACAGTG+TGG + chr2_4:5475430-5475449 Msa0310660:CDS 40.0%
TAAACCACACTGTAGACCAA+AGG - chr2_4:5475437-5475456 None:intergenic 40.0%
TTTGGTCTACAGTGTGGTTT+AGG + chr2_4:5475436-5475455 Msa0310660:CDS 40.0%
GTGGTTTAGGTGATGAGTTT+AGG + chr2_4:5475449-5475468 Msa0310660:CDS 40.0%
! TACCTTCTTCCCCATTTTGA+AGG - chr2_4:5475509-5475528 None:intergenic 40.0%
ATGACACCAAACAACTCAAG+AGG - chr2_4:5475548-5475567 None:intergenic 40.0%
GATTTCATCATCGGAAGCCA+TGG - chr2_4:5470281-5470300 None:intergenic 45.0%
AACTTTGCTGCGTCAATCAC+CGG + chr2_4:5470469-5470488 Msa0310660:five_prime_UTR 45.0%
AATCGGAGCAATTACAGGAC+CGG - chr2_4:5470491-5470510 None:intergenic 45.0%
GACGCCGGAGATAATGAATT+TGG + chr2_4:5470523-5470542 Msa0310660:five_prime_UTR 45.0%
GTCTCCGGTAATCATCTTCA+CGG - chr2_4:5470570-5470589 None:intergenic 45.0%
GTGAAGATGATTACCGGAGA+CGG + chr2_4:5470569-5470588 Msa0310660:five_prime_UTR 45.0%
TCTGATTCAATCTCCGTCTC+CGG - chr2_4:5470585-5470604 None:intergenic 45.0%
!! GCAAAAGCATCATGTCGATC+CGG - chr2_4:5470616-5470635 None:intergenic 45.0%
!! TGAGAGATGAAGCGTTGAAG+AGG + chr2_4:5470686-5470705 Msa0310660:five_prime_UTR 45.0%
!! GAGAGATGAAGCGTTGAAGA+GGG + chr2_4:5470687-5470706 Msa0310660:five_prime_UTR 45.0%
GGGAGAGAGAGGAAACAATT+AGG + chr2_4:5470707-5470726 Msa0310660:five_prime_UTR 45.0%
AAGAAGGAAGAGGAAGAAGC+TGG + chr2_4:5470745-5470764 Msa0310660:five_prime_UTR 45.0%
! GATTTTTCCTTCTCCTGCAC+AGG - chr2_4:5470781-5470800 None:intergenic 45.0%
AGCAGAATCAACAGCAGAAG+AGG + chr2_4:5470803-5470822 Msa0310660:five_prime_UTR 45.0%
AGAATCAACAGCAGAAGAGG+AGG + chr2_4:5470806-5470825 Msa0310660:five_prime_UTR 45.0%
AGCAGAAGAGGAGGAATAGA+TGG + chr2_4:5470815-5470834 Msa0310660:five_prime_UTR 45.0%
GCAGAAGAGGAGGAATAGAT+GGG + chr2_4:5470816-5470835 Msa0310660:five_prime_UTR 45.0%
GGATCAGAATCAGAATCTGG+AGG + chr2_4:5470837-5470856 Msa0310660:five_prime_UTR 45.0%
CAGAATCAGAATCTGGAGGA+AGG + chr2_4:5470841-5470860 Msa0310660:five_prime_UTR 45.0%
AATCAGAATCTGGAGGAAGG+TGG + chr2_4:5470844-5470863 Msa0310660:five_prime_UTR 45.0%
TCAATTACTCTCCCAGGAGT+TGG - chr2_4:5470946-5470965 None:intergenic 45.0%
GTAGCATCAATTACTCTCCC+AGG - chr2_4:5470952-5470971 None:intergenic 45.0%
TAATTGATGCTACTCCTGGG+AGG + chr2_4:5470959-5470978 Msa0310660:five_prime_UTR 45.0%
! GGTTGATTCTGATGCTACAC+CGG + chr2_4:5471020-5471039 Msa0310660:five_prime_UTR 45.0%
! GTTGATTCTGATGCTACACC+GGG + chr2_4:5471021-5471040 Msa0310660:five_prime_UTR 45.0%
GATGCTACTCCTAAGCTTAG+TGG + chr2_4:5471087-5471106 Msa0310660:five_prime_UTR 45.0%
GATCTTTGTCTCTTCGGAGT+AGG - chr2_4:5471123-5471142 None:intergenic 45.0%
CGAAGAGACAAAGATCGAGA+TGG + chr2_4:5471127-5471146 Msa0310660:five_prime_UTR 45.0%
ATCGAGATGGGATGAAACAC+CGG + chr2_4:5471140-5471159 Msa0310660:five_prime_UTR 45.0%
! GATGAAACACCGGCTACTAT+GGG + chr2_4:5471150-5471169 Msa0310660:five_prime_UTR 45.0%
GTTACACTTCCCATAGTAGC+CGG - chr2_4:5471162-5471181 None:intergenic 45.0%
! GGAAGTGTAACACCATTACC+TGG + chr2_4:5471171-5471190 Msa0310660:five_prime_UTR 45.0%
!! TCCTGTTGGTGGTGTTGAAT+TGG + chr2_4:5471230-5471249 Msa0310660:five_prime_UTR 45.0%
CTACACCTGGTGCTTTACAA+GGG + chr2_4:5471259-5471278 Msa0310660:five_prime_UTR 45.0%
TCAAGCTCTTCGTCAGTCAA+AGG - chr2_4:5471348-5471367 None:intergenic 45.0%
CTAATCGGCACATATGAAGC+GGG - chr2_4:5471411-5471430 None:intergenic 45.0%
CCTAATCGGCACATATGAAG+CGG - chr2_4:5471412-5471431 None:intergenic 45.0%
TTCCTTGCAGGTGTCCTAAT+CGG - chr2_4:5471426-5471445 None:intergenic 45.0%
GATGTTCCTAAAGAAGCTCC+TGG + chr2_4:5471519-5471538 Msa0310660:five_prime_UTR 45.0%
TTCATAAAAGGCAAGCCACC+AGG - chr2_4:5471540-5471559 None:intergenic 45.0%
GAATGAAGAGGAGTTGTCTC+CGG + chr2_4:5471602-5471621 Msa0310660:five_prime_UTR 45.0%
TTCCTCTCTTTCTGCTCATC+CGG - chr2_4:5471624-5471643 None:intergenic 45.0%
!! CTCAAAGCTGTTTTCCTCTG+CGG - chr2_4:5471687-5471706 None:intergenic 45.0%
GGCAGTATCCGGTTAAACAA+AGG - chr2_4:5471747-5471766 None:intergenic 45.0%
GTTGCTTATGCAGCCTACTT+TGG + chr2_4:5471767-5471786 Msa0310660:five_prime_UTR 45.0%
TTATTTCCCTCCCCTCAACA+CGG - chr2_4:5471926-5471945 None:intergenic 45.0%
CTACTATGATTGCTGCCATG+AGG + chr2_4:5471976-5471995 Msa0310660:five_prime_UTR 45.0%
GTTATCTATGTCAGGCCTCA+TGG - chr2_4:5471994-5472013 None:intergenic 45.0%
TGACAGACAGCCTTCAAGAA+GGG - chr2_4:5472095-5472114 None:intergenic 45.0%
TCCACAAGAGATCTCAGATG+GGG - chr2_4:5472200-5472219 None:intergenic 45.0%
TATTAGGCAACACCGTGGTA+AGG + chr2_4:5472358-5472377 Msa0310660:five_prime_UTR 45.0%
! TCAGAAACTTCTGGGTTAGG+AGG + chr2_4:5472600-5472619 Msa0310660:five_prime_UTR 45.0%
! AAACTTCTGGGTTAGGAGGA+TGG + chr2_4:5472604-5472623 Msa0310660:five_prime_UTR 45.0%
CAAGCAACTTGTGGAGACAA+CGG + chr2_4:5472646-5472665 Msa0310660:five_prime_UTR 45.0%
TGAGAAGGTGGTCACTAACT+TGG + chr2_4:5472772-5472791 Msa0310660:five_prime_UTR 45.0%
GAGAAGGTGGTCACTAACTT+GGG + chr2_4:5472773-5472792 Msa0310660:five_prime_UTR 45.0%
TGATATTGATGCACGGTTGG+AGG + chr2_4:5472802-5472821 Msa0310660:five_prime_UTR 45.0%
TTTGTGGTACCATCAAGTGG+AGG + chr2_4:5472954-5472973 Msa0310660:five_prime_UTR 45.0%
GTGCCATGAGGAACAATTGA+TGG + chr2_4:5473051-5473070 Msa0310660:five_prime_UTR 45.0%
GACCCATCAATTGTTCCTCA+TGG - chr2_4:5473057-5473076 None:intergenic 45.0%
!! GAAGAGTATCCCGAAGTTCT+AGG + chr2_4:5473109-5473128 Msa0310660:five_prime_UTR 45.0%
! GAAGATGACTCCACCGATTA+AGG + chr2_4:5473180-5473199 Msa0310660:five_prime_UTR 45.0%
GGAAGCAAATCCTTAATCGG+TGG - chr2_4:5473193-5473212 None:intergenic 45.0%
! CGATTAAGGATTTGCTTCCC+AGG + chr2_4:5473194-5473213 Msa0310660:five_prime_UTR 45.0%
GAATAGGCATGAGAAAGTCC+AGG + chr2_4:5473234-5473253 Msa0310660:five_prime_UTR 45.0%
CAAGGTCAATACAGTTCTCC+TGG - chr2_4:5473255-5473274 None:intergenic 45.0%
! GGAGAACTGTATTGACCTTG+TGG + chr2_4:5473255-5473274 Msa0310660:five_prime_UTR 45.0%
! ACTGTATTGACCTTGTGGGT+AGG + chr2_4:5473260-5473279 Msa0310660:five_prime_UTR 45.0%
AGTTTGTACCTGCCAGAGAA+TGG + chr2_4:5473302-5473321 Msa0310660:five_prime_UTR 45.0%
ACAGATCCTCATCCATTCTC+TGG - chr2_4:5473317-5473336 None:intergenic 45.0%
GATGCTTAAGGCACACAAGA+AGG + chr2_4:5473351-5473370 Msa0310660:five_prime_UTR 45.0%
ATAATCTCAAGGTGCAGGAG+AGG + chr2_4:5473455-5473474 Msa0310660:five_prime_UTR 45.0%
!! AGTGCTGGCAAAACTGTGAA+GGG - chr2_4:5473535-5473554 None:intergenic 45.0%
CGATACTCATTCATCAGTGC+TGG - chr2_4:5473550-5473569 None:intergenic 45.0%
!! ATGAGAGCATCCTCAAGCAA+AGG - chr2_4:5473673-5473692 None:intergenic 45.0%
TTTGCTTGAGGATGCTCTCA+TGG + chr2_4:5473672-5473691 Msa0310660:five_prime_UTR 45.0%
! TGGACAGGGATTTGGTTCAT+AGG + chr2_4:5473692-5473711 Msa0310660:five_prime_UTR 45.0%
GCCAGACATAGTTCAGCAAA+TGG - chr2_4:5473789-5473808 None:intergenic 45.0%
! CTGTGATGGAAGCCATTGAA+GGG + chr2_4:5473845-5473864 Msa0310660:five_prime_UTR 45.0%
AGTACACCTCCCTAACTTTC+CGG - chr2_4:5473936-5473955 None:intergenic 45.0%
CTCTCTGTATATTGGAGCTC+AGG + chr2_4:5473969-5473988 Msa0310660:five_prime_UTR 45.0%
!! ATCCTCTAGTGATGGGTATG+CGG - chr2_4:5474007-5474026 None:intergenic 45.0%
TGTGCTCATCCTCTAGTGAT+GGG - chr2_4:5474014-5474033 None:intergenic 45.0%
TTGTGCTCATCCTCTAGTGA+TGG - chr2_4:5474015-5474034 None:intergenic 45.0%
CAGCATCCACAACACATAAC+TGG - chr2_4:5474431-5474450 None:intergenic 45.0%
TAGCATCCTGGTGTGAAACT+GGG - chr2_4:5474696-5474715 None:intergenic 45.0%
ATAGCATCCTGGTGTGAAAC+TGG - chr2_4:5474697-5474716 None:intergenic 45.0%
! GCTTTTGTCACTGTAGTTGG+AGG + chr2_4:5475108-5475127 Msa0310660:intron 45.0%
CTTCTCACATGCTTCCTGTT+GGG + chr2_4:5475156-5475175 Msa0310660:CDS 45.0%
TGCAATACCTGCCCTTACAA+GGG + chr2_4:5475475-5475494 Msa0310660:CDS 45.0%
GGACTGTCTGCCTTCAAAAT+GGG + chr2_4:5475496-5475515 Msa0310660:CDS 45.0%
GACTGTCTGCCTTCAAAATG+GGG + chr2_4:5475497-5475516 Msa0310660:CDS 45.0%
TGCCTTCAAAATGGGGAAGA+AGG + chr2_4:5475504-5475523 Msa0310660:CDS 45.0%
CACCAAACAACTCAAGAGGA+GGG - chr2_4:5475544-5475563 None:intergenic 45.0%
ACACCAAACAACTCAAGAGG+AGG - chr2_4:5475545-5475564 None:intergenic 45.0%
TTTATGCAGGTCGAACTGTC+CGG + chr2_4:5475615-5475634 Msa0310660:intron 45.0%
GCCGTAAAGATCTGTGTCGA+AGG - chr2_4:5470365-5470384 None:intergenic 50.0%
GACGCAGCAAAGTTTCTACG+AGG - chr2_4:5470463-5470482 None:intergenic 50.0%
! CGACATGATGCTTTTGCTGC+TGG + chr2_4:5470619-5470638 Msa0310660:five_prime_UTR 50.0%
AAACGCCGGATCCGTCTAAA+AGG + chr2_4:5470647-5470666 Msa0310660:five_prime_UTR 50.0%
GGAAGAGGAAGAAGCTGGTA+AGG + chr2_4:5470750-5470769 Msa0310660:five_prime_UTR 50.0%
GGAGGAAGGTGGTGTGAAAA+AGG + chr2_4:5470855-5470874 Msa0310660:five_prime_UTR 50.0%
GACTTCTGATTGGGATGCAC+CGG + chr2_4:5470882-5470901 Msa0310660:five_prime_UTR 50.0%
TCCTGGGAGGAGGAATAGAT+GGG + chr2_4:5470972-5470991 Msa0310660:five_prime_UTR 50.0%
TCAGAATCAACCAACCTCCC+CGG - chr2_4:5471012-5471031 None:intergenic 50.0%
!! TTACACCTGGTGGTGCTACT+TGG + chr2_4:5471064-5471083 Msa0310660:five_prime_UTR 50.0%
!! TACACCTGGTGGTGCTACTT+GGG + chr2_4:5471065-5471084 Msa0310660:five_prime_UTR 50.0%
GCTACTCCTAAGCTTAGTGG+CGG + chr2_4:5471090-5471109 Msa0310660:five_prime_UTR 50.0%
CTACTCCTAAGCTTAGTGGC+GGG + chr2_4:5471091-5471110 Msa0310660:five_prime_UTR 50.0%
GTAATCCCGCCACTAAGCTT+AGG - chr2_4:5471099-5471118 None:intergenic 50.0%
! GGATGAAACACCGGCTACTA+TGG + chr2_4:5471149-5471168 Msa0310660:five_prime_UTR 50.0%
!! ACACCTGGTGTTACTCCTGT+TGG + chr2_4:5471216-5471235 Msa0310660:five_prime_UTR 50.0%
GCCAATTCAACACCACCAAC+AGG - chr2_4:5471234-5471253 None:intergenic 50.0%
GAATTGGCTACACCTACACC+TGG + chr2_4:5471246-5471265 Msa0310660:five_prime_UTR 50.0%
! CCTTGTAAAGCACCAGGTGT+AGG - chr2_4:5471261-5471280 None:intergenic 50.0%
CCTACACCTGGTGCTTTACA+AGG + chr2_4:5471258-5471277 Msa0310660:five_prime_UTR 50.0%
! AACGACCCTTGTAAAGCACC+AGG - chr2_4:5471267-5471286 None:intergenic 50.0%
GGGAGAGGGATATTGAAGAG+AGG + chr2_4:5471316-5471335 Msa0310660:five_prime_UTR 50.0%
!! CCGCTTCATATGTGCCGATT+AGG + chr2_4:5471409-5471428 Msa0310660:five_prime_UTR 50.0%
GTAGCAAGAAGCTTCCTTGC+AGG - chr2_4:5471438-5471457 None:intergenic 50.0%
TGATAAAGCGGAGTCCCCAA+CGG - chr2_4:5471468-5471487 None:intergenic 50.0%
CAGATTCCAGAAGAGAACCG+TGG + chr2_4:5471486-5471505 Msa0310660:five_prime_UTR 50.0%
GTTCCTAAAGAAGCTCCTGG+TGG + chr2_4:5471522-5471541 Msa0310660:five_prime_UTR 50.0%
AAGCCACCAGGAGCTTCTTT+AGG - chr2_4:5471528-5471547 None:intergenic 50.0%
!! AAAGCTGTTTTCCTCTGCGG+TGG - chr2_4:5471684-5471703 None:intergenic 50.0%
CGCAGAGGAAAACAGCTTTG+AGG + chr2_4:5471685-5471704 Msa0310660:five_prime_UTR 50.0%
ACTGATAAGGCTCGCGAGTT+TGG + chr2_4:5471714-5471733 Msa0310660:five_prime_UTR 50.0%
! GTGCTGGGCCTTTGTTTAAC+CGG + chr2_4:5471736-5471755 Msa0310660:five_prime_UTR 50.0%
GCATAAGCAACGGCAGTATC+CGG - chr2_4:5471758-5471777 None:intergenic 50.0%
GCTTATGCAGCCTACTTTGG+AGG + chr2_4:5471770-5471789 Msa0310660:five_prime_UTR 50.0%
CTCTCTTGGTCCTCCAAAGT+AGG - chr2_4:5471783-5471802 None:intergenic 50.0%
! CTACTTTGGAGGACCAAGAG+AGG + chr2_4:5471781-5471800 Msa0310660:five_prime_UTR 50.0%
!!! GGACCAAGAGAGGCATCTTT+TGG + chr2_4:5471791-5471810 Msa0310660:five_prime_UTR 50.0%
AGACTACTATGCCCGTGTTG+AGG + chr2_4:5471911-5471930 Msa0310660:five_prime_UTR 50.0%
GACTACTATGCCCGTGTTGA+GGG + chr2_4:5471912-5471931 Msa0310660:five_prime_UTR 50.0%
ACTACTATGCCCGTGTTGAG+GGG + chr2_4:5471913-5471932 Msa0310660:five_prime_UTR 50.0%
TATTTCCCTCCCCTCAACAC+GGG - chr2_4:5471925-5471944 None:intergenic 50.0%
TCTCAGTAAAGCTGCTGGGT+TGG + chr2_4:5471953-5471972 Msa0310660:five_prime_UTR 50.0%
! AGTGTCGTTGCATCTGCTCT+CGG + chr2_4:5472053-5472072 Msa0310660:five_prime_UTR 50.0%
CTGACAGACAGCCTTCAAGA+AGG - chr2_4:5472096-5472115 None:intergenic 50.0%
GTGTTGAAGCCACTGTGGAA+GGG + chr2_4:5472335-5472354 Msa0310660:five_prime_UTR 50.0%
!! AGCCACTGTGGAAGGGTATT+AGG + chr2_4:5472342-5472361 Msa0310660:five_prime_UTR 50.0%
TGCCTAATACCCTTCCACAG+TGG - chr2_4:5472347-5472366 None:intergenic 50.0%
!! AAGGGTATTAGGCAACACCG+TGG + chr2_4:5472353-5472372 Msa0310660:five_prime_UTR 50.0%
GAGTGAACCTTACAGGCGAA+TGG + chr2_4:5472736-5472755 Msa0310660:five_prime_UTR 50.0%
ACCTTACAGGCGAATGGTCA+TGG + chr2_4:5472742-5472761 Msa0310660:five_prime_UTR 50.0%
TCCATGACCATTCGCCTGTA+AGG - chr2_4:5472746-5472765 None:intergenic 50.0%
! ATCACTGGTCTGCTCTTGGA+AGG - chr2_4:5472855-5472874 None:intergenic 50.0%
! CATCATCACTGGTCTGCTCT+TGG - chr2_4:5472859-5472878 None:intergenic 50.0%
GGCGCAGTTGTAAACTCACT+CGG + chr2_4:5472902-5472921 Msa0310660:five_prime_UTR 50.0%
GCGCAGTTGTAAACTCACTC+GGG + chr2_4:5472903-5472922 Msa0310660:five_prime_UTR 50.0%
TGTCATGAAGCAGTGCCATG+AGG + chr2_4:5473039-5473058 Msa0310660:five_prime_UTR 50.0%
GATCAGCAATCCTACCCACA+AGG - chr2_4:5473273-5473292 None:intergenic 50.0%
TGGGTAGGATTGCTGATCGT+GGG + chr2_4:5473275-5473294 Msa0310660:five_prime_UTR 50.0%
TACCTGCCAGAGAATGGATG+AGG + chr2_4:5473308-5473327 Msa0310660:five_prime_UTR 50.0%
ATCCTCATCCATTCTCTGGC+AGG - chr2_4:5473313-5473332 None:intergenic 50.0%
GAATCGTGTGTGCACTACTG+TGG + chr2_4:5473480-5473499 Msa0310660:five_prime_UTR 50.0%
!! CAGTGCTGGCAAAACTGTGA+AGG - chr2_4:5473536-5473555 None:intergenic 50.0%
TGCTGTGACTCCTTTGCTTG+AGG + chr2_4:5473660-5473679 Msa0310660:five_prime_UTR 50.0%
TTGAGGATGCTCTCATGGAC+AGG + chr2_4:5473677-5473696 Msa0310660:five_prime_UTR 50.0%
TGAGGATGCTCTCATGGACA+GGG + chr2_4:5473678-5473697 Msa0310660:five_prime_UTR 50.0%
TGCTCTCATGGACAGGGATT+TGG + chr2_4:5473684-5473703 Msa0310660:five_prime_UTR 50.0%
! GCTGTGATGGAAGCCATTGA+AGG + chr2_4:5473844-5473863 Msa0310660:five_prime_UTR 50.0%
TGGAAGCCATTGAAGGGATG+AGG + chr2_4:5473851-5473870 Msa0310660:five_prime_UTR 50.0%
GGAAGCCATTGAAGGGATGA+GGG + chr2_4:5473852-5473871 Msa0310660:five_prime_UTR 50.0%
TGCTACCCTCATCCCTTCAA+TGG - chr2_4:5473860-5473879 None:intergenic 50.0%
TGAAGGGATGAGGGTAGCAT+TGG + chr2_4:5473861-5473880 Msa0310660:five_prime_UTR 50.0%
GAAGGGATGAGGGTAGCATT+GGG + chr2_4:5473862-5473881 Msa0310660:five_prime_UTR 50.0%
GTACACCTCCCTAACTTTCC+GGG - chr2_4:5473935-5473954 None:intergenic 50.0%
! GGAAAGTTAGGGAGGTGTAC+TGG + chr2_4:5473935-5473954 Msa0310660:five_prime_UTR 50.0%
TGTGAAACTGGGATACCAGG+AGG - chr2_4:5474685-5474704 None:intergenic 50.0%
TGGTGTGAAACTGGGATACC+AGG - chr2_4:5474688-5474707 None:intergenic 50.0%
TGGTATCCCAGTTTCACACC+AGG + chr2_4:5474687-5474706 Msa0310660:intron 50.0%
GTCAATCGCGAATAGCATCC+TGG - chr2_4:5474708-5474727 None:intergenic 50.0%
! CCAACAGGAAGCATGTGAGA+AGG - chr2_4:5475158-5475177 None:intergenic 50.0%
CCTTCTCACATGCTTCCTGT+TGG + chr2_4:5475155-5475174 Msa0310660:CDS 50.0%
CTGCAATACCTGCCCTTACA+AGG + chr2_4:5475474-5475493 Msa0310660:CDS 50.0%
AGGCAGACAGTCCCTTGTAA+GGG - chr2_4:5475489-5475508 None:intergenic 50.0%
AAGGCAGACAGTCCCTTGTA+AGG - chr2_4:5475490-5475509 None:intergenic 50.0%
GGGACTGTCTGCCTTCAAAA+TGG + chr2_4:5475495-5475514 Msa0310660:CDS 50.0%
! CTCCCTCCTCTTGAGTTGTT+TGG + chr2_4:5475539-5475558 Msa0310660:intron 50.0%
TTCTGCAGCAAGCCAGTTAC+CGG - chr2_4:5475637-5475656 None:intergenic 50.0%
TTTGAGAGGTCCGAGTTTCC+TGG + chr2_4:5475785-5475804 Msa0310660:intron 50.0%
TGCTGCTGGTGAGAAAACGC+CGG + chr2_4:5470633-5470652 Msa0310660:five_prime_UTR 55.0%
! AGCGTTGAAGAGGGAGAGAG+AGG + chr2_4:5470696-5470715 Msa0310660:five_prime_UTR 55.0%
! GGTGTCGTCGCATTCGAATC+CGG - chr2_4:5470904-5470923 None:intergenic 55.0%
GGATTCGAATGCGACGACAC+CGG + chr2_4:5470903-5470922 Msa0310660:five_prime_UTR 55.0%
GATTCGAATGCGACGACACC+GGG + chr2_4:5470904-5470923 Msa0310660:five_prime_UTR 55.0%
ATTCGAATGCGACGACACCG+GGG + chr2_4:5470905-5470924 Msa0310660:five_prime_UTR 55.0%
TGGGATGCTACTCCAACTCC+TGG + chr2_4:5470931-5470950 Msa0310660:five_prime_UTR 55.0%
GGGATGCTACTCCAACTCCT+GGG + chr2_4:5470932-5470951 Msa0310660:five_prime_UTR 55.0%
TTGATGCTACTCCTGGGAGG+AGG + chr2_4:5470962-5470981 Msa0310660:five_prime_UTR 55.0%
CTCCTGGGAGGAGGAATAGA+TGG + chr2_4:5470971-5470990 Msa0310660:five_prime_UTR 55.0%
TCCCATCTATTCCTCCTCCC+AGG - chr2_4:5470976-5470995 None:intergenic 55.0%
GATTCTGATGCTACACCGGG+TGG + chr2_4:5471024-5471043 Msa0310660:five_prime_UTR 55.0%
GCAGGTGTAGCACCAGGTAA+TGG - chr2_4:5471186-5471205 None:intergenic 55.0%
CCACCAACAGGAGTAACACC+AGG - chr2_4:5471222-5471241 None:intergenic 55.0%
!! CCTGGTGTTACTCCTGTTGG+TGG + chr2_4:5471219-5471238 Msa0310660:five_prime_UTR 55.0%
TCGGCACATATGAAGCGGGA+GGG - chr2_4:5471407-5471426 None:intergenic 55.0%
ATCGGCACATATGAAGCGGG+AGG - chr2_4:5471408-5471427 None:intergenic 55.0%
! TGCCGATTAGGACACCTGCA+AGG + chr2_4:5471421-5471440 Msa0310660:five_prime_UTR 55.0%
TCTTGCTACACCTACGCCGT+TGG + chr2_4:5471449-5471468 Msa0310660:five_prime_UTR 55.0%
CTTGCTACACCTACGCCGTT+GGG + chr2_4:5471450-5471469 Msa0310660:five_prime_UTR 55.0%
TTGCTACACCTACGCCGTTG+GGG + chr2_4:5471451-5471470 Msa0310660:five_prime_UTR 55.0%
TGCTGACCACGGTTCTCTTC+TGG - chr2_4:5471495-5471514 None:intergenic 55.0%
CTCCGGATGAGCAGAAAGAG+AGG + chr2_4:5471619-5471638 Msa0310660:five_prime_UTR 55.0%
AGAATGGTACACCACCGCAG+AGG + chr2_4:5471670-5471689 Msa0310660:five_prime_UTR 55.0%
! GCCCCATCTGAGATCTCTTG+TGG + chr2_4:5472196-5472215 Msa0310660:five_prime_UTR 55.0%
AGCAGCAGCTTCAGCAAGTG+CGG - chr2_4:5472288-5472307 None:intergenic 55.0%
!! ACTCGGTGTTGAAGCCACTG+TGG + chr2_4:5472330-5472349 Msa0310660:five_prime_UTR 55.0%
! GGTGTTGAAGCCACTGTGGA+AGG + chr2_4:5472334-5472353 Msa0310660:five_prime_UTR 55.0%
!! AAGCAGTGTGTGAGCACCGA+GGG + chr2_4:5472533-5472552 Msa0310660:five_prime_UTR 55.0%
ATACTCGGCTTCCACACCCT+CGG - chr2_4:5472552-5472571 None:intergenic 55.0%
! CTGGGTTAGGAGGATGGCTT+TGG + chr2_4:5472610-5472629 Msa0310660:five_prime_UTR 55.0%
GTGGGTAGGATTGCTGATCG+TGG + chr2_4:5473274-5473293 Msa0310660:five_prime_UTR 55.0%
GGGTAGGATTGCTGATCGTG+GGG + chr2_4:5473276-5473295 Msa0310660:five_prime_UTR 55.0%
AGAGTTGCCAGGACATCCTG+TGG - chr2_4:5473430-5473449 None:intergenic 55.0%
TGCTTCTGCCGTGAAGCACA+TGG + chr2_4:5473723-5473742 Msa0310660:five_prime_UTR 55.0%
TCCCAGTGCCATGTGCTTCA+CGG - chr2_4:5473734-5473753 None:intergenic 55.0%
!! AGTGGCTGGTTTGGGTTGTG+AGG + chr2_4:5473753-5473772 Msa0310660:five_prime_UTR 55.0%
!! TTTGGGTTGTGAGGATGCGC+TGG + chr2_4:5473762-5473781 Msa0310660:five_prime_UTR 55.0%
AAGGATTGTTCCACCCTGCC+CGG + chr2_4:5473914-5473933 Msa0310660:five_prime_UTR 55.0%
TGCCGCATACCCATCACTAG+AGG + chr2_4:5474002-5474021 Msa0310660:five_prime_UTR 55.0%
ACACTGCTACAAGCTGACCG+AGG - chr2_4:5474472-5474491 None:intergenic 55.0%
ATAGCCACTATCCTGCCTCC+TGG + chr2_4:5474667-5474686 Msa0310660:intron 55.0%
GATACCAGGAGGCAGGATAG+TGG - chr2_4:5474674-5474693 None:intergenic 55.0%
AAACTGGGATACCAGGAGGC+AGG - chr2_4:5474681-5474700 None:intergenic 55.0%
CTCACATGCTTCCTGTTGGG+AGG + chr2_4:5475159-5475178 Msa0310660:CDS 55.0%
AGACAGTCCCTTGTAAGGGC+AGG - chr2_4:5475485-5475504 None:intergenic 55.0%
AGGTCGAACTGTCCGGTAAC+TGG + chr2_4:5475622-5475641 Msa0310660:intron 55.0%
GGAGTAGCATCCCATCTCCC+CGG - chr2_4:5470925-5470944 None:intergenic 60.0%
ATGGGATGAGACACCGACGC+CGG + chr2_4:5470990-5471009 Msa0310660:five_prime_UTR 60.0%
!! ACGCCTGGTGGTGTTACACC+TGG + chr2_4:5471051-5471070 Msa0310660:five_prime_UTR 60.0%
CCACCAGGTGTAACACCACC+AGG - chr2_4:5471057-5471076 None:intergenic 60.0%
!! CCTGGTGGTGTTACACCTGG+TGG + chr2_4:5471054-5471073 Msa0310660:five_prime_UTR 60.0%
GCATCCCAAGTAGCACCACC+AGG - chr2_4:5471072-5471091 None:intergenic 60.0%
CCAGGTGTATACGCAGCAGC+AGG - chr2_4:5471204-5471223 None:intergenic 60.0%
CCTGCTGCTGCGTATACACC+TGG + chr2_4:5471201-5471220 Msa0310660:five_prime_UTR 60.0%
!! AAGGCTCGCGAGTTTGGTGC+TGG + chr2_4:5471720-5471739 Msa0310660:five_prime_UTR 60.0%
!! AGGCTCGCGAGTTTGGTGCT+GGG + chr2_4:5471721-5471740 Msa0310660:five_prime_UTR 60.0%
ACTATGCCCGTGTTGAGGGG+AGG + chr2_4:5471916-5471935 Msa0310660:five_prime_UTR 60.0%
CTATGCCCGTGTTGAGGGGA+GGG + chr2_4:5471917-5471936 Msa0310660:five_prime_UTR 60.0%
TCTTGGCAAGCTCGGCACAC+TGG + chr2_4:5472125-5472144 Msa0310660:five_prime_UTR 60.0%
CTTGGCAAGCTCGGCACACT+GGG + chr2_4:5472126-5472145 Msa0310660:five_prime_UTR 60.0%
GCTGAAGCTGCTGCTCCCTA+CGG + chr2_4:5472293-5472312 Msa0310660:five_prime_UTR 60.0%
GCAACACCGTGGTAAGGTGC+TGG + chr2_4:5472364-5472383 Msa0310660:five_prime_UTR 60.0%
ACGCAGCCAGCACCTTACCA+CGG - chr2_4:5472373-5472392 None:intergenic 60.0%
! GAAGCAGTGTGTGAGCACCG+AGG + chr2_4:5472532-5472551 Msa0310660:five_prime_UTR 60.0%
TGCGAAAGCCATCGGTCCAC+AGG + chr2_4:5473411-5473430 Msa0310660:five_prime_UTR 60.0%
CAGGACATCCTGTGGACCGA+TGG - chr2_4:5473422-5473441 None:intergenic 60.0%
CATCGGTCCACAGGATGTCC+TGG + chr2_4:5473420-5473439 Msa0310660:five_prime_UTR 60.0%
TGCCGTGAAGCACATGGCAC+TGG + chr2_4:5473729-5473748 Msa0310660:five_prime_UTR 60.0%
GCCGTGAAGCACATGGCACT+GGG + chr2_4:5473730-5473749 Msa0310660:five_prime_UTR 60.0%
! GAAGCACATGGCACTGGGAG+TGG + chr2_4:5473735-5473754 Msa0310660:five_prime_UTR 60.0%
!! GCACTGGGAGTGGCTGGTTT+GGG + chr2_4:5473745-5473764 Msa0310660:five_prime_UTR 60.0%
GGGCAGGGTGGAACAATCCT+TGG - chr2_4:5473915-5473934 None:intergenic 60.0%
TCCACCCTGCCCGGAAAGTT+AGG + chr2_4:5473923-5473942 Msa0310660:five_prime_UTR 60.0%
CCACCCTGCCCGGAAAGTTA+GGG + chr2_4:5473924-5473943 Msa0310660:five_prime_UTR 60.0%
CCTCCCTAACTTTCCGGGCA+GGG - chr2_4:5473930-5473949 None:intergenic 60.0%
ACCTCCCTAACTTTCCGGGC+AGG - chr2_4:5473931-5473950 None:intergenic 60.0%
TGGTAAGGCTGCGCCTGTGC+AGG + chr2_4:5470765-5470784 Msa0310660:five_prime_UTR 65.0%
ATGCGACGACACCGGGGAGA+TGG + chr2_4:5470911-5470930 Msa0310660:five_prime_UTR 65.0%
TGCGACGACACCGGGGAGAT+GGG + chr2_4:5470912-5470931 Msa0310660:five_prime_UTR 65.0%
TGGGATGAGACACCGACGCC+GGG + chr2_4:5470991-5471010 Msa0310660:five_prime_UTR 65.0%
TCAACCAACCTCCCCGGCGT+CGG - chr2_4:5471006-5471025 None:intergenic 65.0%
ACACCGGGTGGTGTAACGCC+TGG + chr2_4:5471036-5471055 Msa0310660:five_prime_UTR 65.0%
CCACCAGGCGTTACACCACC+CGG - chr2_4:5471042-5471061 None:intergenic 65.0%
GCAGCAGCAGGTGTAGCACC+AGG - chr2_4:5471192-5471211 None:intergenic 65.0%
!! GTGTGTGAGCACCGAGGGTG+TGG + chr2_4:5472538-5472557 Msa0310660:five_prime_UTR 65.0%
! CACATGGCACTGGGAGTGGC+TGG + chr2_4:5473739-5473758 Msa0310660:five_prime_UTR 65.0%
! GGCACTGGGAGTGGCTGGTT+TGG + chr2_4:5473744-5473763 Msa0310660:five_prime_UTR 65.0%
CCCTAACTTTCCGGGCAGGG+TGG - chr2_4:5473927-5473946 None:intergenic 65.0%
CCCTGCCCGGAAAGTTAGGG+AGG + chr2_4:5473927-5473946 Msa0310660:five_prime_UTR 65.0%
GGCTGCGCCTGTGCAGGAGA+AGG + chr2_4:5470771-5470790 Msa0310660:five_prime_UTR 70.0%
GGGATGAGACACCGACGCCG+GGG + chr2_4:5470992-5471011 Msa0310660:five_prime_UTR 70.0%
ATGAGACACCGACGCCGGGG+AGG + chr2_4:5470995-5471014 Msa0310660:five_prime_UTR 70.0%
CCGGGTGGTGTAACGCCTGG+TGG + chr2_4:5471039-5471058 Msa0310660:five_prime_UTR 70.0%
AGCGGAGTCCCCAACGGCGT+AGG - chr2_4:5471462-5471481 None:intergenic 70.0%
GACACCGACGCCGGGGAGGT+TGG + chr2_4:5470999-5471018 Msa0310660:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 5470186 5475941 5470186 ID=Msa0310660;Name=Msa0310660
chr2_4 mRNA 5470186 5475941 5470186 ID=Msa0310660-mRNA-1;Parent=Msa0310660;Name=Msa0310660-mRNA-1;_AED=0.06;_eAED=0.06;_QI=3902|0.4|0.5|1|0.2|0.16|6|259|121
chr2_4 exon 5470186 5474095 5470186 ID=Msa0310660-mRNA-1:exon:1920;Parent=Msa0310660-mRNA-1
chr2_4 exon 5474573 5474578 5474573 ID=Msa0310660-mRNA-1:exon:1921;Parent=Msa0310660-mRNA-1
chr2_4 exon 5475124 5475325 5475124 ID=Msa0310660-mRNA-1:exon:1922;Parent=Msa0310660-mRNA-1
chr2_4 exon 5475415 5475525 5475415 ID=Msa0310660-mRNA-1:exon:1923;Parent=Msa0310660-mRNA-1
chr2_4 exon 5475624 5475794 5475624 ID=Msa0310660-mRNA-1:exon:1924;Parent=Msa0310660-mRNA-1
chr2_4 exon 5475815 5475941 5475815 ID=Msa0310660-mRNA-1:exon:1925;Parent=Msa0310660-mRNA-1
chr2_4 five_prime_UTR 5470186 5474087 5470186 ID=Msa0310660-mRNA-1:five_prime_utr;Parent=Msa0310660-mRNA-1
chr2_4 CDS 5474088 5474095 5474088 ID=Msa0310660-mRNA-1:cds;Parent=Msa0310660-mRNA-1
chr2_4 CDS 5474573 5474578 5474573 ID=Msa0310660-mRNA-1:cds;Parent=Msa0310660-mRNA-1
chr2_4 CDS 5475124 5475325 5475124 ID=Msa0310660-mRNA-1:cds;Parent=Msa0310660-mRNA-1
chr2_4 CDS 5475415 5475525 5475415 ID=Msa0310660-mRNA-1:cds;Parent=Msa0310660-mRNA-1
chr2_4 CDS 5475624 5475662 5475624 ID=Msa0310660-mRNA-1:cds;Parent=Msa0310660-mRNA-1
chr2_4 three_prime_UTR 5475663 5475794 5475663 ID=Msa0310660-mRNA-1:three_prime_utr;Parent=Msa0310660-mRNA-1
chr2_4 three_prime_UTR 5475815 5475941 5475815 ID=Msa0310660-mRNA-1:three_prime_utr;Parent=Msa0310660-mRNA-1
Gene Sequence

>Msa0310660

ATGTATTGGCTACATTGGAGGAGCATGAAGCGAGTTCAATCTTTTCCTTCTCACATGCTTCCTGTTGGGAGGTTCCACAAGTTTGGCAGATTCAAGCATGACAACTGTTGGAGCAGTGCAATTTTTGTTCAAAATCTTTCTTCTCACACATGTCCTCTTTCCAATTTGGTCATTATAAACAGCTTGGATAGTGAATTTATAGGATTTCCTTGCATACCATTGTTCTCAAAGTTTACCTTTGGTCTACAGTGTGGTTTAGGTGATGAGTTTAGGTGCTGCAATACCTGCCCTTACAAGGGACTGTCTGCCTTCAAAATGGGGAAGAAGGTCGAACTGTCCGGTAACTGGCTTGCTGCAGAAATATGA
Protein sequence

>Msa0310660

MYWLHWRSMKRVQSFPSHMLPVGRFHKFGRFKHDNCWSSAIFVQNLSSHTCPLSNLVIINSLDSEFIGFPCIPLFSKFTFGLQCGLGDEFRCCNTCPYKGLSAFKMGKKVELSGNWLAAEI*