AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0344530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0344530 MtrunA17_Chr2g0279331 96.508 1260 18 3 1 1260 1 1234 0.0 2485
Msa0344530 MtrunA17_Chr1g0181151 91.525 59 5 0 1260 1318 410 468 1.52e-24 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0344530 AT5G64270.1 84.053 1273 170 13 4 1260 5 1260 0.0 2073
Msa0344530 AT3G57050.5 79.661 59 12 0 1260 1318 328 386 2.54e-21 98.6
Msa0344530 AT3G57050.4 54.545 99 41 1 1220 1318 314 408 3.24e-21 98.6
Msa0344530 AT3G57050.2 79.661 59 12 0 1260 1318 391 449 4.76e-21 98.6
Msa0344530 AT3G57050.1 54.545 99 41 1 1220 1318 370 464 5.07e-21 98.6

Find 391 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAGATTATCAGTATTT+TGG 0.097766 3_1:+3285386 Msa0344530:CDS
TCATGCCTATTCTTCAAAAT+TGG 0.171597 3_1:-3287048 None:intergenic
AGAAGTTCTAGGTTCAATTT+TGG 0.175711 3_1:+3286945 Msa0344530:CDS
TGATAGAGTTCTTTATAAAT+TGG 0.206729 3_1:+3285649 Msa0344530:CDS
GGCACTGGGAGTGGCTGGTT+TGG 0.210974 3_1:+3287569 Msa0344530:CDS
TCTTTCCTCTTTGAGTATAT+TGG 0.214805 3_1:+3287438 Msa0344530:CDS
AAGTCGATTGTCAATGTTAT+TGG 0.215549 3_1:+3286976 Msa0344530:CDS
GGATGAAACACCTGCTACTA+TGG 0.221807 3_1:+3284974 Msa0344530:CDS
ATGCAATGACACCGGGAATA+TGG 0.225727 3_1:+3284736 Msa0344530:CDS
AGTATAATAGCTGGCATATA+AGG 0.269378 3_1:-3286257 None:intergenic
TAAAGCAAGGTAGGCTGATT+AGG 0.271541 3_1:-3289114 None:intergenic
GCACTGGGAGTGGCTGGTTT+GGG 0.272651 3_1:+3287570 Msa0344530:CDS
ACTGATAAGGCTCGTGAATT+TGG 0.282330 3_1:+3285539 Msa0344530:CDS
TGCTTTATTGCCCTTCTTGA+AGG 0.285663 3_1:+3285907 Msa0344530:CDS
ACAAGAAGGGTATAAGGTTT+TGG 0.290686 3_1:+3285205 Msa0344530:CDS
TCTTTATAAATTGGATGAAT+TGG 0.295496 3_1:+3285658 Msa0344530:CDS
AAAGATGACTCCACCTATTA+AGG 0.296881 3_1:+3287005 Msa0344530:CDS
TAATCAGCCTACCTTGCTTT+AGG 0.302349 3_1:+3289116 Msa0344530:CDS
GTTTCCACAAGAAGGGTATA+AGG 0.306484 3_1:+3285199 Msa0344530:CDS
GATGCTAATGTGATGCTTAA+TGG 0.306849 3_1:+3286700 Msa0344530:CDS
GCTGAAGCTGCTGCTCCTTA+TGG 0.308195 3_1:+3286118 Msa0344530:CDS
TGCTCTCATGGACAGGGATT+TGG 0.309397 3_1:+3287509 Msa0344530:CDS
AAAATTGAACCTAGAACTTC+TGG 0.312356 3_1:-3286943 None:intergenic
CTTTGAGTATATTGGTGAAA+TGG 0.316138 3_1:+3287446 Msa0344530:CDS
AAACCACCAGGAGCTTCTTT+AGG 0.324095 3_1:-3285350 None:intergenic
GCAAGAAGAACGCAAGAAAA+TGG 0.324405 3_1:+3284119 Msa0344530:CDS
CTCCTGGGAGGAGGAATAGA+TGG 0.327493 3_1:+3284796 Msa0344530:CDS
AGCAGAAGAGGAGGAATAGA+TGG 0.331460 3_1:+3284640 Msa0344530:CDS
GGACCAAGAGAGGCATCTTT+TGG 0.333443 3_1:+3285616 Msa0344530:CDS
AAGATGAGAGTGAACCTTAC+AGG 0.336123 3_1:+3286554 Msa0344530:CDS
CATCTTGATCTTTGTCTCTT+CGG 0.340768 3_1:-3284951 None:intergenic
CTTGCTACACCTACGCCGTT+GGG 0.343482 3_1:+3285275 Msa0344530:CDS
CAGCTTCTTATGTGCCGATT+AGG 0.343784 3_1:+3285234 Msa0344530:CDS
TTACACCTGGTGGTGCTACT+TGG 0.344851 3_1:+3284889 Msa0344530:CDS
ATATATAACTCTCTGTATAT+TGG 0.346022 3_1:+3287786 Msa0344530:CDS
GGGAGAGAGAGGAAACAATT+AGG 0.348222 3_1:+3284529 Msa0344530:CDS
AGCCATTGTGGAAGGGTATT+AGG 0.349292 3_1:+3286167 Msa0344530:CDS
CCAAAATACTGATAATCTTC+AGG 0.353123 3_1:-3285386 None:intergenic
TCCTGTTGGTGGTGTTGAAT+TGG 0.358556 3_1:+3285055 Msa0344530:CDS
AAGTCATGCTTATTCTGATT+CGG 0.359133 3_1:+3286284 Msa0344530:CDS
GGAGGAAGATGGTGTGAAAA+AGG 0.362831 3_1:+3284680 Msa0344530:CDS
CTGGGAAGCAAATCCTTAAT+AGG 0.363997 3_1:-3287018 None:intergenic
TCCACCCTGCCCGGAAAGTT+AGG 0.365154 3_1:+3287748 Msa0344530:CDS
AGTACACCTCCCTAACTTTC+CGG 0.366416 3_1:-3287758 None:intergenic
AGTCATGCTTATTCTGATTC+GGG 0.375914 3_1:+3286285 Msa0344530:CDS
CTGGGTTAGGAGGATGGCTT+TGG 0.377749 3_1:+3286435 Msa0344530:CDS
GAAGAGTACCCAGAAGTTCT+AGG 0.380939 3_1:+3286934 Msa0344530:CDS
TGGGTTTATTATTCCGTTGA+TGG 0.385433 3_1:+3286231 Msa0344530:CDS
CCACAAATCTGAGGAAGATA+TGG 0.387473 3_1:-3286763 None:intergenic
TTTGAGTATATTGGTGAAAT+GGG 0.389391 3_1:+3287447 Msa0344530:CDS
TGCTGACCACGATTCTCTTC+AGG 0.390854 3_1:-3285317 None:intergenic
GGTGTCATTGCATTCGAATC+AGG 0.391236 3_1:-3284726 None:intergenic
GGAGAAGTTTCAAATATGTT+TGG 0.392943 3_1:-3287633 None:intergenic
TTCCTCTCTTTCTGCTCATC+CGG 0.400046 3_1:-3285446 None:intergenic
GTAGCAAGAAGCTTCCTTGC+AGG 0.400126 3_1:-3285260 None:intergenic
CTAGACAATGCACTTAGAAC+TGG 0.400887 3_1:+3289244 Msa0344530:CDS
AGCAGCAGCTTCAGCAAGTG+CGG 0.405247 3_1:-3286110 None:intergenic
CCAGAACTTAATGTGCAAAA+TGG 0.405341 3_1:+3287399 Msa0344530:CDS
GTACACCTCCCTAACTTTCC+GGG 0.406012 3_1:-3287757 None:intergenic
AGTAGTCTTCATCAATCAAA+AGG 0.407120 3_1:-3285721 None:intergenic
GACTACTATGCCCGTGTTGA+AGG 0.409440 3_1:+3285737 Msa0344530:CDS
TGAGCTTCTTGAGATGCTTA+AGG 0.409469 3_1:+3287164 Msa0344530:CDS
TTTGCTTGAGGATGCTCTCA+TGG 0.410867 3_1:+3287497 Msa0344530:CDS
CTCTCTGTATATTGGAGCTC+AGG 0.412940 3_1:+3287794 Msa0344530:CDS
GTTGCTTATGCAGCCTACTT+TGG 0.415175 3_1:+3285592 Msa0344530:CDS
TGCAATGACACCGGGAATAT+GGG 0.416084 3_1:+3284737 Msa0344530:CDS
GCATAAGCAACGGCAGTATT+CGG 0.416589 3_1:-3285580 None:intergenic
TTCCTTGCAGGTGTCCTAAT+CGG 0.417079 3_1:-3285248 None:intergenic
TCCATGACCATTCGCCTGTA+AGG 0.417256 3_1:-3286568 None:intergenic
TGAGAAGGTGGTCACTAACT+TGG 0.419649 3_1:+3286597 Msa0344530:CDS
CCATATCTTCCTCAGATTTG+TGG 0.421065 3_1:+3286763 Msa0344530:CDS
TCCCAGTGCCATGTGCTTCA+CGG 0.421966 3_1:-3287556 None:intergenic
AGAGTTATTGATGCTACTCC+TGG 0.422519 3_1:+3284780 Msa0344530:CDS
TCTAGACAATGCATTAGAAC+TGG 0.422713 3_1:+3289512 Msa0344530:CDS
TGCCGTGAAGCACATGGCAC+TGG 0.425652 3_1:+3287554 Msa0344530:CDS
ATGCTAATGTGATGCTTAAT+GGG 0.428045 3_1:+3286701 Msa0344530:CDS
TGGGTAGGATTGCTGATCGT+GGG 0.432130 3_1:+3287100 Msa0344530:CDS
TGGACAGGGATTTGGTTCAT+AGG 0.432432 3_1:+3287517 Msa0344530:CDS
GGAAGAGGAAGAAGCTGGTA+AGG 0.433964 3_1:+3284575 Msa0344530:CDS
AAACCCCGGATCCGTCTGTT+AGG 0.435773 3_1:+3284469 Msa0344530:CDS
ATAACATTGATGAATATGTT+AGG 0.437807 3_1:+3285834 Msa0344530:CDS
CATCATCACTAGTCTGCTCT+TGG 0.441191 3_1:-3286681 None:intergenic
ACCTTCGACACAGATCTCTA+TGG 0.441624 3_1:+3284171 Msa0344530:CDS
AGAGCTACTGTGAACACTTT+CGG 0.442013 3_1:+3287207 Msa0344530:CDS
AGTATCGACCTTTGAGCAAT+GGG 0.442491 3_1:+3289554 Msa0344530:CDS
AAAGCAAGGTAGGCTGATTA+GGG 0.444074 3_1:-3289113 None:intergenic
CTTCAAAATTGGAGTCAACC+TGG 0.446024 3_1:-3287037 None:intergenic
TCCATTTGCTGAACTATGTC+TGG 0.446236 3_1:+3287610 Msa0344530:CDS
CTGGTCTCGCGGACTGCAGC+AGG 0.446374 3_1:-3289154 None:intergenic
CTGGTCTCGCGGACTGCAGC+AGG 0.446374 3_1:-3289423 None:intergenic
GAGAGATGAAGCGTTGAAGA+GGG 0.447466 3_1:+3284509 Msa0344530:CDS
TTGAGGATGCTCTCATGGAC+AGG 0.447512 3_1:+3287502 Msa0344530:CDS
TGAGAGATGAAGCGTTGAAG+AGG 0.451101 3_1:+3284508 Msa0344530:CDS
CTTGGCAAGCTCGGCACACC+GGG 0.452247 3_1:+3285951 Msa0344530:CDS
GCAGGTGTAGCACCAGGTAA+TGG 0.453544 3_1:-3285008 None:intergenic
ATAAATTGGATGAATTGGTT+CGG 0.454142 3_1:+3285663 Msa0344530:CDS
CACATGGCACTGGGAGTGGC+TGG 0.454748 3_1:+3287564 Msa0344530:CDS
ACAAGAATCTTATGCACATA+AGG 0.457643 3_1:-3285686 None:intergenic
CGTCTTCTCGATTTCATCAT+CGG 0.458922 3_1:-3284097 None:intergenic
AAGAAGGAAGAGGAAGAAGC+TGG 0.460954 3_1:+3284570 Msa0344530:CDS
GGCGCAGTTGTAAACTCGCT+CGG 0.461377 3_1:+3286727 Msa0344530:CDS
TTTGAGGCAGTTAACTGATA+AGG 0.461605 3_1:+3285526 Msa0344530:CDS
TGAAGGGATGAGGGTAGCCT+TGG 0.463322 3_1:+3287686 Msa0344530:CDS
GTGCCATGAGGAACAATTGA+TGG 0.465345 3_1:+3286876 Msa0344530:CDS
ATGGGATCAGAATCAGAATC+AGG 0.467762 3_1:+3284659 Msa0344530:CDS
CCTACTCCTGGTGCTTTGCA+AGG 0.467895 3_1:+3285083 Msa0344530:CDS
ACAGATCCTCATCCATTCTC+TGG 0.468210 3_1:-3287139 None:intergenic
GCCAATTCAACACCACCAAC+AGG 0.469526 3_1:-3285056 None:intergenic
GATCTTTGTCTCTTCGGAGT+CGG 0.470813 3_1:-3284945 None:intergenic
TAAGACCTAACAGACGGATC+CGG 0.471836 3_1:-3284474 None:intergenic
AGTGTCGTTGCATCTGCTCT+CGG 0.474620 3_1:+3285878 Msa0344530:CDS
TCATCAGTAGCAGGAATTGA+AGG 0.474996 3_1:-3284219 None:intergenic
GGGCAGGGTGGAACAGTCCT+TGG 0.475048 3_1:-3287737 None:intergenic
TCATCAATGTTATCTATGTC+AGG 0.476225 3_1:-3285824 None:intergenic
ACCTCCCTAACTTTCCGGGC+AGG 0.476349 3_1:-3287753 None:intergenic
TCTTGCTACACCTACGCCGT+TGG 0.476894 3_1:+3285274 Msa0344530:CDS
GCCAGACATAGTTCAGCAAA+TGG 0.476897 3_1:-3287611 None:intergenic
AAAGGCTAAGACTTCTGATT+GGG 0.476928 3_1:+3284698 Msa0344530:CDS
TCTAATCTCAGTAAAGCTGC+TGG 0.478206 3_1:+3285773 Msa0344530:CDS
AAAAGGCTAAGACTTCTGAT+TGG 0.479035 3_1:+3284697 Msa0344530:CDS
AAGACCTAACAGACGGATCC+GGG 0.481436 3_1:-3284473 None:intergenic
GTAGTCTTCATCAATCAAAA+GGG 0.482357 3_1:-3285720 None:intergenic
GTTGAATGAAGAGAATGAAG+AGG 0.482375 3_1:+3285415 Msa0344530:CDS
TACACCTGGTGGTGCTACTT+GGG 0.482601 3_1:+3284890 Msa0344530:CDS
GGATATATTGCGAAAGCCAT+CGG 0.483547 3_1:+3287228 Msa0344530:CDS
ATCTGTTGGTATTGAGGATG+TGG 0.483898 3_1:+3289204 Msa0344530:CDS
ATCTGTTGGTATTGAGGATG+TGG 0.483898 3_1:+3289473 Msa0344530:CDS
GCTTATGCAGCCTACTTTGG+AGG 0.483942 3_1:+3285595 Msa0344530:CDS
GCGTCGTCAGAATTGTTAAT+CGG 0.485069 3_1:-3284327 None:intergenic
CTATTAAGGATTTGCTTCCC+AGG 0.486209 3_1:+3287019 Msa0344530:CDS
TCTGTCAGAGTAAGAAATCT+TGG 0.487061 3_1:+3285933 Msa0344530:CDS
ATAATTTGTTGAGGTGGGAG+AGG 0.487090 3_1:+3285126 Msa0344530:CDS
GTTTCTTCTTCATCAGTAGC+AGG 0.488527 3_1:-3284228 None:intergenic
CAAGGTCAATACAGTTCTCC+TGG 0.488577 3_1:-3287077 None:intergenic
GTCGGTGTTGCTGATATTGT+TGG 0.492268 3_1:+3286511 Msa0344530:CDS
AGCGTTGAAGAGGGAGAGAG+AGG 0.494960 3_1:+3284518 Msa0344530:CDS
AAGATCTTCTGTTAAACCTC+TGG 0.495227 3_1:-3289173 None:intergenic
AAGATCTTCTGTTAAACCTC+TGG 0.495227 3_1:-3289442 None:intergenic
TTCAAGAAGGGCAATAAAGC+AGG 0.495269 3_1:-3285905 None:intergenic
CTCAACAAATTATACTGCTC+CGG 0.495418 3_1:-3285116 None:intergenic
TTGTGCTCATCCTCTAGTGA+TGG 0.495697 3_1:-3287837 None:intergenic
GAAGCACATGGCACTGGGAG+TGG 0.497504 3_1:+3287560 Msa0344530:CDS
GGAAAGTTAGGGAGGTGTAC+TGG 0.497515 3_1:+3287760 Msa0344530:CDS
GATTATTCAATAGAGTTGCC+AGG 0.499509 3_1:-3287263 None:intergenic
AAACTTCTGGGTTAGGAGGA+TGG 0.499766 3_1:+3286429 Msa0344530:CDS
GATGCTACTCCTAAGCTTAG+TGG 0.500348 3_1:+3284912 Msa0344530:CDS
GATCTTGTTCGTATATCTGT+TGG 0.501570 3_1:+3289190 Msa0344530:CDS
GATCTTGTTCGTATATCTGT+TGG 0.501570 3_1:+3289459 Msa0344530:CDS
AATTTCGAAGAAGAAGAAGA+AGG 0.501830 3_1:+3284554 Msa0344530:CDS
GGGATATTGAAGAGAGGAAT+CGG 0.502496 3_1:+3285147 Msa0344530:CDS
GTTATCTATGTCAGGCCTCA+TGG 0.502813 3_1:-3285816 None:intergenic
GGCTACCCTCATCCCTTCAA+TGG 0.503009 3_1:-3287682 None:intergenic
CCACCCTGCCCGGAAAGTTA+GGG 0.503764 3_1:+3287749 Msa0344530:CDS
GCAGTATAATTTGTTGAGGT+GGG 0.504182 3_1:+3285121 Msa0344530:CDS
TAACCAAAAGATGCCTCTCT+TGG 0.506202 3_1:-3285619 None:intergenic
AAGGACTGTTCCACCCTGCC+CGG 0.506812 3_1:+3287739 Msa0344530:CDS
TCAAAACTTTCAATACCATA+AGG 0.507643 3_1:-3286133 None:intergenic
ATCTGATATTGATGCAAGGT+TGG 0.508434 3_1:+3286624 Msa0344530:CDS
CCTGCTGCTGCTTATACACC+TGG 0.509073 3_1:+3285026 Msa0344530:CDS
GTTGTCCTGTATGAGTATCT+TGG 0.510312 3_1:+3286910 Msa0344530:CDS
CTTGTGGAAATTATAGAGCA+TGG 0.510872 3_1:+3286037 Msa0344530:CDS
TCTTCAGGAATCTGATAAAG+TGG 0.510895 3_1:-3285302 None:intergenic
CCTCCCTAACTTTCCGGGCA+GGG 0.511382 3_1:-3287752 None:intergenic
ACCTTACAGGCGAATGGTCA+TGG 0.511454 3_1:+3286567 Msa0344530:CDS
TGCTGTGACTCCTTTGCTTG+AGG 0.511865 3_1:+3287485 Msa0344530:CDS
TGGGATGAGACACCGACGCC+GGG 0.513612 3_1:+3284816 Msa0344530:CDS
TATTTCCCTCCCTTCAACAC+GGG 0.514922 3_1:-3285747 None:intergenic
TTTGGGTTGCGAGGATGCGC+TGG 0.515289 3_1:+3287587 Msa0344530:CDS
ACACCTGGTGTTACTCCTGT+TGG 0.515327 3_1:+3285041 Msa0344530:CDS
AATGTGATGCTTAATGGGTT+CGG 0.516022 3_1:+3286706 Msa0344530:CDS
ATTGAATAATCTCAAGGTGC+AGG 0.516114 3_1:+3287275 Msa0344530:CDS
GTAATCCCACCACTAAGCTT+AGG 0.516729 3_1:-3284921 None:intergenic
AAGTATCGACCTTTGAGCAA+TGG 0.516831 3_1:+3289553 Msa0344530:CDS
TCTGATTCAATCTCCGTCTC+CGG 0.517371 3_1:-3284404 None:intergenic
GTTCTTAATTACTGTCTCCA+AGG 0.517599 3_1:+3287720 Msa0344530:CDS
GTCTCCGGTAATCATCTTCA+CGG 0.517637 3_1:-3284389 None:intergenic
AGCAGTATAATTTGTTGAGG+TGG 0.517845 3_1:+3285120 Msa0344530:CDS
TCGTATATCTGTTGGTATTG+AGG 0.519628 3_1:+3289198 Msa0344530:CDS
TCGTATATCTGTTGGTATTG+AGG 0.519628 3_1:+3289467 Msa0344530:CDS
CCTGGTGTTACTCCTGTTGG+TGG 0.520763 3_1:+3285044 Msa0344530:CDS
AGTTTGTACCTGCCAGAGAA+TGG 0.523117 3_1:+3287127 Msa0344530:CDS
TTGACCGTGAAGATGATTAC+CGG 0.523129 3_1:+3284385 Msa0344530:CDS
CGATACTCATTCATCAGTGC+TGG 0.524696 3_1:-3287372 None:intergenic
GGTGTAGCATCCCATATTCC+CGG 0.524740 3_1:-3284747 None:intergenic
CGAAGAGACAAAGATCAAGA+TGG 0.525075 3_1:+3284952 Msa0344530:CDS
TGCGAAAGCCATCGGACCAC+AGG 0.525261 3_1:+3287236 Msa0344530:CDS
GATGCTTAAGGCACACAAGA+AGG 0.525703 3_1:+3287176 Msa0344530:CDS
CGCAGAGGAAAACTGCTTTG+AGG 0.525795 3_1:+3285510 Msa0344530:CDS
TTCAAAATTGGAGTCAACCT+GGG 0.526301 3_1:-3287036 None:intergenic
GACTTCTTTAGTATAATAGC+TGG 0.526805 3_1:-3286266 None:intergenic
TAATTTGTTGAGGTGGGAGA+GGG 0.527574 3_1:+3285127 Msa0344530:CDS
ATCCTCATCCATTCTCTGGC+AGG 0.527834 3_1:-3287135 None:intergenic
TGGGATGCTACACCGACTCC+TGG 0.529207 3_1:+3284756 Msa0344530:CDS
TCCCATCTATTCCTCCTCCC+AGG 0.529228 3_1:-3284798 None:intergenic
TGGAAGCCATTGAAGGGATG+AGG 0.531614 3_1:+3287676 Msa0344530:CDS
GAATTGGCCACACCTACTCC+TGG 0.532464 3_1:+3285071 Msa0344530:CDS
GCGCAGTTGTAAACTCGCTC+GGG 0.533320 3_1:+3286728 Msa0344530:CDS
TCAGAAACTTCTGGGTTAGG+AGG 0.533859 3_1:+3286425 Msa0344530:CDS
TGGTAAGGTTGCGCCGGAGA+AGG 0.533863 3_1:+3284590 Msa0344530:CDS
TTTGCAAGGGTCGTTTACGC+CGG 0.534091 3_1:+3285097 Msa0344530:CDS
AGCAGAATCAACAGCAGAAG+AGG 0.534224 3_1:+3284628 Msa0344530:CDS
GCATATAAGGCTTCCATCAA+CGG 0.534950 3_1:-3286244 None:intergenic
GTGTGTGAGCACTGAGGGTG+TGG 0.535884 3_1:+3286363 Msa0344530:CDS
GGTTGATTCTGATGCTACAC+CGG 0.536421 3_1:+3284845 Msa0344530:CDS
CTGACAGACGGCCTTCAAGA+AGG 0.536511 3_1:-3285918 None:intergenic
TCTCAGTAAAGCTGCTGGGT+TGG 0.536657 3_1:+3285778 Msa0344530:CDS
CTTCTCCAAGATACTCATAC+AGG 0.537984 3_1:-3286915 None:intergenic
CATCGGACCACAGGATGTCC+TGG 0.538913 3_1:+3287245 Msa0344530:CDS
AAAACCTTATACCCTTCTTG+TGG 0.539245 3_1:-3285203 None:intergenic
GAAGGGATGAGGGTAGCCTT+GGG 0.540075 3_1:+3287687 Msa0344530:CDS
CTCTCTTGGTCCTCCAAAGT+AGG 0.542045 3_1:-3285605 None:intergenic
GAATGAAGAGGAGTTGTCTC+CGG 0.542145 3_1:+3285427 Msa0344530:CDS
ATCACAGCATTTATCACATG+TGG 0.542295 3_1:-3287654 None:intergenic
ATTAACAATTCTGACGACGC+TGG 0.542334 3_1:+3284330 Msa0344530:CDS
GTTGCACTTCCCATAGTAGC+AGG 0.543060 3_1:-3284984 None:intergenic
CAGGACATCCTGTGGTCCGA+TGG 0.543451 3_1:-3287244 None:intergenic
CTCCGGATGAGCAGAAAGAG+AGG 0.543658 3_1:+3285444 Msa0344530:CDS
TTGCTGCACAATCTTAATCC+CGG 0.544337 3_1:-3285969 None:intergenic
AGTGGCTGGTTTGGGTTGCG+AGG 0.545104 3_1:+3287578 Msa0344530:CDS
ATTGAATCAGATTCTTTCGC+CGG 0.546582 3_1:+3284416 Msa0344530:CDS
GCAAAAGCATCATGTCGATC+CGG 0.547159 3_1:-3284435 None:intergenic
CAACAGCAATTCTTGAAATG+AGG 0.547976 3_1:-3286843 None:intergenic
CTAGACAATGCATTAGAACT+GGG 0.547988 3_1:+3289513 Msa0344530:CDS
AACTCTATTGAATAATCTCA+AGG 0.549147 3_1:+3287269 Msa0344530:CDS
GAACAATTGATGGGTCATCT+TGG 0.549166 3_1:+3286886 Msa0344530:CDS
GTGGGTAGGATTGCTGATCG+TGG 0.549308 3_1:+3287099 Msa0344530:CDS
TTTCCACAAGAGATCTCAGA+TGG 0.550608 3_1:-3286024 None:intergenic
CTAATCGGCACATAAGAAGC+TGG 0.552031 3_1:-3285233 None:intergenic
GCAACACCGTGGTAAGGTGC+TGG 0.552685 3_1:+3286189 Msa0344530:CDS
ATGCTATGTTTCCACAAGAA+GGG 0.554606 3_1:+3285192 Msa0344530:CDS
GAGAAGGTGGTCACTAACTT+GGG 0.558654 3_1:+3286598 Msa0344530:CDS
ACACCGGGTGGTGTAACGCC+TGG 0.559480 3_1:+3284861 Msa0344530:CDS
ATAATGAATTTGTTACGTCT+CGG 0.561088 3_1:+3284355 Msa0344530:CDS
AAATTGAACCTAGAACTTCT+GGG 0.561337 3_1:-3286942 None:intergenic
CGTGTGACCTAAAGCAAGGT+AGG 0.561467 3_1:-3289123 None:intergenic
GATGCTATGTTTCCACAAGA+AGG 0.561803 3_1:+3285191 Msa0344530:CDS
GGGAGAGGGATATTGAAGAG+AGG 0.562525 3_1:+3285141 Msa0344530:CDS
AATCAGAATCAGGAGGAAGA+TGG 0.564745 3_1:+3284669 Msa0344530:CDS
CCACCAGGCGTTACACCACC+CGG 0.565365 3_1:-3284864 None:intergenic
TGACAGACGGCCTTCAAGAA+GGG 0.565592 3_1:-3285917 None:intergenic
GTTATGACCGACGTTATGAC+CGG 0.566315 3_1:-3284295 None:intergenic
ATGCTTAAGGCACACAAGAA+GGG 0.566666 3_1:+3287177 Msa0344530:CDS
GGTGTTGAAGCCATTGTGGA+AGG 0.566693 3_1:+3286159 Msa0344530:CDS
CCACCAGGTGTAACACCACC+AGG 0.567246 3_1:-3284879 None:intergenic
CTGTTAAACCTCTGGTCTCG+CGG 0.567480 3_1:-3289165 None:intergenic
CTGTTAAACCTCTGGTCTCG+CGG 0.567480 3_1:-3289434 None:intergenic
TTGCTACACCTACGCCGTTG+GGG 0.568070 3_1:+3285276 Msa0344530:CDS
GATGTTCCTAAAGAAGCTCC+TGG 0.568413 3_1:+3285344 Msa0344530:CDS
ACGTTATGACCGGTGTATGA+CGG 0.569117 3_1:-3284285 None:intergenic
TTTCACCAATATACTCAAAG+AGG 0.569856 3_1:-3287443 None:intergenic
GCCGTGAAGCACATGGCACT+GGG 0.570780 3_1:+3287555 Msa0344530:CDS
GAATAGGCATGAGAAAGTCC+AGG 0.573723 3_1:+3287059 Msa0344530:CDS
GACACCGACGCCGGGGAGGT+TGG 0.573817 3_1:+3284824 Msa0344530:CDS
AGTGGAGTCCCCAACGGCGT+AGG 0.574440 3_1:-3285284 None:intergenic
TCTTGGCAAGCTCGGCACAC+CGG 0.574881 3_1:+3285950 Msa0344530:CDS
TCCTGGGAGGAGGAATAGAT+GGG 0.575435 3_1:+3284797 Msa0344530:CDS
GCCCCATCTGAGATCTCTTG+TGG 0.575595 3_1:+3286021 Msa0344530:CDS
ATCACTAGTCTGCTCTTGGA+AGG 0.575981 3_1:-3286677 None:intergenic
CTAATCTCAGTAAAGCTGCT+GGG 0.576518 3_1:+3285774 Msa0344530:CDS
GATGAAACACCTGCTACTAT+GGG 0.577456 3_1:+3284975 Msa0344530:CDS
ACTACTATGCCCGTGTTGAA+GGG 0.579026 3_1:+3285738 Msa0344530:CDS
CATCAGTAGCAGGAATTGAA+GGG 0.579422 3_1:-3284218 None:intergenic
GAAGAGACAAAGATCAAGAT+GGG 0.579429 3_1:+3284953 Msa0344530:CDS
CTACTCCTGGTGCTTTGCAA+GGG 0.581506 3_1:+3285084 Msa0344530:CDS
GATTCGAATGCAATGACACC+GGG 0.582206 3_1:+3284729 Msa0344530:CDS
ACATGTGATAAATGCTGTGA+TGG 0.582632 3_1:+3287656 Msa0344530:CDS
GGAGAACTGTATTGACCTTG+TGG 0.582863 3_1:+3287080 Msa0344530:CDS
TGCTGCTGGTGAGAAAACCC+CGG 0.582900 3_1:+3284455 Msa0344530:CDS
GTAAGAAATCTTGGCAAGCT+CGG 0.583586 3_1:+3285942 Msa0344530:CDS
AGAAGCTGGTAAGGTTGCGC+CGG 0.584245 3_1:+3284584 Msa0344530:CDS
CTATGCCCGTGTTGAAGGGA+GGG 0.585454 3_1:+3285742 Msa0344530:CDS
TGCCATGAGGAACAATTGAT+GGG 0.585856 3_1:+3286877 Msa0344530:CDS
TCAGAATCAACCAACCTCCC+CGG 0.586207 3_1:-3284834 None:intergenic
TGCATCTGCCGTGAAGCACA+TGG 0.586302 3_1:+3287548 Msa0344530:CDS
AAGGCTCGTGAATTTGGTGC+TGG 0.587291 3_1:+3285545 Msa0344530:CDS
GGAAGTGCAACTCCATTACC+TGG 0.587320 3_1:+3284996 Msa0344530:CDS
GCATCCCAAGTAGCACCACC+AGG 0.587445 3_1:-3284894 None:intergenic
TCAACCAACCTCCCCGGCGT+CGG 0.588537 3_1:-3284828 None:intergenic
GAGAACTGTATTGACCTTGT+GGG 0.588815 3_1:+3287081 Msa0344530:CDS
AACGACCCTTGCAAAGCACC+AGG 0.589295 3_1:-3285089 None:intergenic
TTGATGCTACTCCTGGGAGG+AGG 0.589392 3_1:+3284787 Msa0344530:CDS
GTTGATTCTGATGCTACACC+GGG 0.590223 3_1:+3284846 Msa0344530:CDS
TGTGCTCATCCTCTAGTGAT+GGG 0.590227 3_1:-3287836 None:intergenic
GCAGCAGCAGGTGTAGCACC+AGG 0.590830 3_1:-3285014 None:intergenic
TAATCTTCAGGCTTCATGAA+AGG 0.591828 3_1:-3285374 None:intergenic
CGGAGCAGTATAATTTGTTG+AGG 0.592027 3_1:+3285117 Msa0344530:CDS
AGAATCAACAGCAGAAGAGG+AGG 0.592190 3_1:+3284631 Msa0344530:CDS
TACCTGCCAGAGAATGGATG+AGG 0.593216 3_1:+3287133 Msa0344530:CDS
AAGAAACTACAAGCAACTTG+TGG 0.594902 3_1:+3286462 Msa0344530:CDS
ACTGTATTGACCTTGTGGGT+AGG 0.597148 3_1:+3287085 Msa0344530:CDS
TATTAGGCAACACCGTGGTA+AGG 0.597389 3_1:+3286183 Msa0344530:CDS
GACCCATCAATTGTTCCTCA+TGG 0.598532 3_1:-3286879 None:intergenic
GCAGAAGAGGAGGAATAGAT+GGG 0.600043 3_1:+3284641 Msa0344530:CDS
CATGGAAACTATTGAGAAGG+TGG 0.601383 3_1:+3286585 Msa0344530:CDS
CCAGGTGTATAAGCAGCAGC+AGG 0.602735 3_1:-3285026 None:intergenic
GCTGCAGTCCGCGAGACCAG+AGG 0.604752 3_1:+3289157 Msa0344530:CDS
GCTGCAGTCCGCGAGACCAG+AGG 0.604752 3_1:+3289426 Msa0344530:CDS
GGTCATGGAAACTATTGAGA+AGG 0.604849 3_1:+3286582 Msa0344530:CDS
GGAAGCCATTGAAGGGATGA+GGG 0.604873 3_1:+3287677 Msa0344530:CDS
GAGTTATTGATGCTACTCCT+GGG 0.608442 3_1:+3284781 Msa0344530:CDS
TCAAGCTCTTCATCAGTCAA+AGG 0.608967 3_1:-3285170 None:intergenic
CCTTGCAAAGCACCAGGAGT+AGG 0.610768 3_1:-3285083 None:intergenic
AAGAACAACAGCAGAACCCA+AGG 0.611634 3_1:-3287703 None:intergenic
TAGACAATGCACTTAGAACT+GGG 0.611766 3_1:+3289245 Msa0344530:CDS
GTAGCATCAATAACTCTACC+AGG 0.612375 3_1:-3284774 None:intergenic
GTATATTGGTGAAATGGGAA+AGG 0.614596 3_1:+3287452 Msa0344530:CDS
ACTATGCCCGTGTTGAAGGG+AGG 0.615072 3_1:+3285741 Msa0344530:CDS
TCAATAACTCTACCAGGAGT+CGG 0.616410 3_1:-3284768 None:intergenic
GATATCAGTTCTAATATACT+CGG 0.616544 3_1:-3286389 None:intergenic
ATGAGAGCATCCTCAAGCAA+AGG 0.616768 3_1:-3287495 None:intergenic
CCCTGCCCGGAAAGTTAGGG+AGG 0.616795 3_1:+3287752 Msa0344530:CDS
AGATTTGTGGTACAATCAAG+TGG 0.616908 3_1:+3286776 Msa0344530:CDS
TGAGGATGCTCTCATGGACA+GGG 0.617031 3_1:+3287503 Msa0344530:CDS
ACGCCTGGTGGTGTTACACC+TGG 0.617245 3_1:+3284876 Msa0344530:CDS
TTATTTCCCTCCCTTCAACA+CGG 0.617901 3_1:-3285748 None:intergenic
TAGTTCATCCCATTGCTCAA+AGG 0.618037 3_1:-3289562 None:intergenic
GCCATAGAGATCTGTGTCGA+AGG 0.618745 3_1:-3284172 None:intergenic
CAGTGCTGGCAAAATTGTGA+AGG 0.621769 3_1:-3287358 None:intergenic
GCTACTCCTAAGCTTAGTGG+TGG 0.624941 3_1:+3284915 Msa0344530:CDS
GCTGTGATGGAAGCCATTGA+AGG 0.626195 3_1:+3287669 Msa0344530:CDS
AGATTTCTTACTCTGACAGA+CGG 0.626383 3_1:-3285930 None:intergenic
CTACTTTGGAGGACCAAGAG+AGG 0.627256 3_1:+3285606 Msa0344530:CDS
CCACCAACAGGAGTAACACC+AGG 0.627500 3_1:-3285044 None:intergenic
CTACTATGATTGCTGCCATG+AGG 0.628805 3_1:+3285801 Msa0344530:CDS
GGTTGCGCCGGAGAAGGAGA+AGG 0.632056 3_1:+3284596 Msa0344530:CDS
TGTCTCTGCAACAATAGCAA+TGG 0.633675 3_1:-3287328 None:intergenic
CTGTGATGGAAGCCATTGAA+GGG 0.634079 3_1:+3287670 Msa0344530:CDS
GGAAGCAAATCCTTAATAGG+TGG 0.634174 3_1:-3287015 None:intergenic
ACTCGGTGTTGAAGCCATTG+TGG 0.634246 3_1:+3286155 Msa0344530:CDS
GAGTGAACCTTACAGGCGAA+TGG 0.634771 3_1:+3286561 Msa0344530:CDS
AAACAGTGTGTGAGCACTGA+GGG 0.635126 3_1:+3286358 Msa0344530:CDS
CAAAGCACCAGGAGTAGGTG+TGG 0.636072 3_1:-3285078 None:intergenic
ATAATCTCAAGGTGCAGGAG+AGG 0.636931 3_1:+3287280 Msa0344530:CDS
TGATTCGAATGCAATGACAC+CGG 0.637185 3_1:+3284728 Msa0344530:CDS
AAAGTAGGCTGCATAAGCAA+CGG 0.637377 3_1:-3285590 None:intergenic
GTGTTGAAGCCATTGTGGAA+GGG 0.637421 3_1:+3286160 Msa0344530:CDS
TTCATGAAAGGTAAACCACC+AGG 0.637522 3_1:-3285362 None:intergenic
TATGACCGGTGTATGACGGA+AGG 0.638313 3_1:-3284281 None:intergenic
CCCTAACTTTCCGGGCAGGG+TGG 0.640804 3_1:-3287749 None:intergenic
TTCCACAAGAGATCTCAGAT+GGG 0.642677 3_1:-3286023 None:intergenic
ACAACAAGAGTGCAAAGGTG+AGG 0.643017 3_1:+3286806 Msa0344530:CDS
ATCGGCACATAAGAAGCTGG+AGG 0.647881 3_1:-3285230 None:intergenic
TGCAGCATACCCATCACTAG+AGG 0.648920 3_1:+3287827 Msa0344530:CDS
GTTTCTGCGAGGAATAACTT+CGG 0.652709 3_1:-3284259 None:intergenic
GACGGTTGAGATAGCAAACA+AGG 0.652931 3_1:+3286489 Msa0344530:CDS
GGCAGTATTCGGTTAAACAA+AGG 0.653268 3_1:-3285569 None:intergenic
TAGTCTTCATCAATCAAAAG+GGG 0.654336 3_1:-3285719 None:intergenic
TGCCTAATACCCTTCCACAA+TGG 0.654446 3_1:-3286169 None:intergenic
ATGAATTTGTTACGTCTCGG+AGG 0.654569 3_1:+3284358 Msa0344530:CDS
CTACTCCTAAGCTTAGTGGT+GGG 0.655445 3_1:+3284916 Msa0344530:CDS
ATGAGACACCGACGCCGGGG+AGG 0.656594 3_1:+3284820 Msa0344530:CDS
GTTAAACAACAAGAGTGCAA+AGG 0.657032 3_1:+3286801 Msa0344530:CDS
AGAAACCTTCCGTCATACAC+CGG 0.660879 3_1:+3284276 Msa0344530:CDS
TCATAACGTCGGTCATAACG+TGG 0.660936 3_1:+3284299 Msa0344530:CDS
TCCACAAGAGATCTCAGATG+GGG 0.662742 3_1:-3286022 None:intergenic
CTAGCGTGTGACCTAAAGCA+AGG 0.664920 3_1:-3289127 None:intergenic
TCGGCACATAAGAAGCTGGA+GGG 0.665180 3_1:-3285229 None:intergenic
GGGTAGGATTGCTGATCGTG+GGG 0.665788 3_1:+3287101 Msa0344530:CDS
AGAACGGCACGCCACCGCAG+AGG 0.666100 3_1:+3285495 Msa0344530:CDS
CAAGCAACTTGTGGAGACGA+CGG 0.666170 3_1:+3286471 Msa0344530:CDS
TGATAAAGTGGAGTCCCCAA+CGG 0.670541 3_1:-3285290 None:intergenic
ATGGGATGAGACACCGACGC+CGG 0.670705 3_1:+3284815 Msa0344530:CDS
GATCATCTGATATTGATGCA+AGG 0.673357 3_1:+3286620 Msa0344530:CDS
GGATCAGAATCAGAATCAGG+AGG 0.675250 3_1:+3284662 Msa0344530:CDS
TGCCGATTAGGACACCTGCA+AGG 0.675865 3_1:+3285246 Msa0344530:CDS
TCAGCATAAGACCTAACAGA+CGG 0.678144 3_1:-3284480 None:intergenic
TTTGTGGTACAATCAAGTGG+AGG 0.684064 3_1:+3286779 Msa0344530:CDS
CAGATTCCTGAAGAGAATCG+TGG 0.685997 3_1:+3285311 Msa0344530:CDS
AACAATAGCAATGGCCACAG+TGG 0.686867 3_1:-3287319 None:intergenic
AGAGTTGCCAGGACATCCTG+TGG 0.687187 3_1:-3287252 None:intergenic
TTGATTGTACCACAAATCTG+AGG 0.687976 3_1:-3286772 None:intergenic
TTTGAATGATGAGAATCAGA+AGG 0.688179 3_1:+3286060 Msa0344530:CDS
CCGGGTGGTGTAACGCCTGG+TGG 0.692520 3_1:+3284864 Msa0344530:CDS
CCTGGTGGTGTTACACCTGG+TGG 0.693980 3_1:+3284879 Msa0344530:CDS
GTTCCTAAAGAAGCTCCTGG+TGG 0.695657 3_1:+3285347 Msa0344530:CDS
AGACCTAACAGACGGATCCG+GGG 0.696018 3_1:-3284472 None:intergenic
GTTGAGATAGCAAACAAGGT+CGG 0.698379 3_1:+3286493 Msa0344530:CDS
AGTGCTGGCAAAATTGTGAA+GGG 0.702395 3_1:-3287357 None:intergenic
GGGATGAGACACCGACGCCG+GGG 0.702741 3_1:+3284817 Msa0344530:CDS
GATTCTGATGCTACACCGGG+TGG 0.710329 3_1:+3284849 Msa0344530:CDS
TTATTGATGCTACTCCTGGG+AGG 0.712647 3_1:+3284784 Msa0344530:CDS
ATACTTGAATGAAATTACAG+AGG 0.713243 3_1:-3289536 None:intergenic
GATCAGCAATCCTACCCACA+AGG 0.716041 3_1:-3287095 None:intergenic
ACGCAGCCAGCACCTTACCA+CGG 0.717063 3_1:-3286195 None:intergenic
GTGAAGATGATTACCGGAGA+CGG 0.717111 3_1:+3284391 Msa0344530:CDS
TCATACACCGGTCATAACGT+CGG 0.735656 3_1:+3284288 Msa0344530:CDS
TGTCATGAAGCAGTGCCATG+AGG 0.764533 3_1:+3286864 Msa0344530:CDS
GAAACAGTGTGTGAGCACTG+AGG 0.771981 3_1:+3286357 Msa0344530:CDS
GAATCGTGTGTGCACCACTG+TGG 0.784014 3_1:+3287305 Msa0344530:CDS
TATGACGGAAGGTTTCTGCG+AGG 0.791111 3_1:-3284270 None:intergenic
AAGGGTATTAGGCAACACCG+TGG 0.809985 3_1:+3286178 Msa0344530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCTAAATATAACAAACTA+AGG - chr3_1:3288316-3288335 None:intergenic 15.0%
!! TGATAGAGTTCTTTATAAAT+TGG + chr3_1:3285649-3285668 Msa0344530:CDS 20.0%
!! TCTTTATAAATTGGATGAAT+TGG + chr3_1:3285658-3285677 Msa0344530:CDS 20.0%
!! ATAACATTGATGAATATGTT+AGG + chr3_1:3285834-3285853 Msa0344530:CDS 20.0%
!! ATATATAACTCTCTGTATAT+TGG + chr3_1:3287786-3287805 Msa0344530:CDS 20.0%
!! AAATCATCAATTAGTAGTTA+TGG + chr3_1:3288039-3288058 Msa0344530:intron 20.0%
!!! AATAACTTCATTTTGAGAAA+TGG + chr3_1:3288076-3288095 Msa0344530:intron 20.0%
!!! GAATTTAAAAAATGCTACTT+TGG + chr3_1:3288388-3288407 Msa0344530:intron 20.0%
!!! TTTGAAGATGAGTTTTAAAT+AGG - chr3_1:3288684-3288703 None:intergenic 20.0%
!!! ATAATGAATTTGTTACGTCT+CGG + chr3_1:3284355-3284374 Msa0344530:CDS 25.0%
!! CTGAAGATTATCAGTATTTT+GGG + chr3_1:3285387-3285406 Msa0344530:CDS 25.0%
!! TGAAGATTATCAGTATTTTG+GGG + chr3_1:3285388-3285407 Msa0344530:CDS 25.0%
! ATAAATTGGATGAATTGGTT+CGG + chr3_1:3285663-3285682 Msa0344530:CDS 25.0%
! TCAAAACTTTCAATACCATA+AGG - chr3_1:3286136-3286155 None:intergenic 25.0%
!!! GAAGAAAATTGTTTTGAAAG+TGG + chr3_1:3286333-3286352 Msa0344530:CDS 25.0%
!! GATATCAGTTCTAATATACT+CGG - chr3_1:3286392-3286411 None:intergenic 25.0%
! AACTCTATTGAATAATCTCA+AGG + chr3_1:3287269-3287288 Msa0344530:CDS 25.0%
! TTTGAGTATATTGGTGAAAT+GGG + chr3_1:3287447-3287466 Msa0344530:CDS 25.0%
! GATTTCAATCATCTATGTAT+TGG + chr3_1:3287899-3287918 Msa0344530:intron 25.0%
!! AAACTTTTCACACAAAAAAG+TGG - chr3_1:3287977-3287996 None:intergenic 25.0%
! ATCTCTACCAAAATAAAACA+CGG - chr3_1:3288008-3288027 None:intergenic 25.0%
!!! TGATGTTTTAGCGTTTTTAT+AGG + chr3_1:3288152-3288171 Msa0344530:intron 25.0%
! AAAATAGAGTCATATCTTCA+AGG - chr3_1:3288287-3288306 None:intergenic 25.0%
!!! AGATGAGTTTTAAATAGGAA+TGG - chr3_1:3288679-3288698 None:intergenic 25.0%
! TGTTAACAATTTATTTCACG+TGG + chr3_1:3288805-3288824 Msa0344530:intron 25.0%
! TTACAGAAGTTAAAAACCTA+GGG - chr3_1:3288913-3288932 None:intergenic 25.0%
! AGCTAAGATTTCTTAAATAG+TGG + chr3_1:3289018-3289037 Msa0344530:intron 25.0%
! AGCTAAGATTTCTTAAATAG+TGG + chr3_1:3289018-3289037 Msa0344530:intron 25.0%
! ATACTTGAATGAAATTACAG+AGG - chr3_1:3289539-3289558 None:intergenic 25.0%
AATTTCGAAGAAGAAGAAGA+AGG + chr3_1:3284554-3284573 Msa0344530:CDS 30.0%
CCAAAATACTGATAATCTTC+AGG - chr3_1:3285389-3285408 None:intergenic 30.0%
! CCTGAAGATTATCAGTATTT+TGG + chr3_1:3285386-3285405 Msa0344530:CDS 30.0%
! CTTTTGCTTAAAGTGAAGAA+CGG + chr3_1:3285479-3285498 Msa0344530:CDS 30.0%
ACAAGAATCTTATGCACATA+AGG - chr3_1:3285689-3285708 None:intergenic 30.0%
TAGTCTTCATCAATCAAAAG+GGG - chr3_1:3285722-3285741 None:intergenic 30.0%
GTAGTCTTCATCAATCAAAA+GGG - chr3_1:3285723-3285742 None:intergenic 30.0%
AGTAGTCTTCATCAATCAAA+AGG - chr3_1:3285724-3285743 None:intergenic 30.0%
TCATCAATGTTATCTATGTC+AGG - chr3_1:3285827-3285846 None:intergenic 30.0%
!!! CAGCAAATTGCTATTTTGAT+TGG + chr3_1:3285986-3286005 Msa0344530:CDS 30.0%
TTTGAATGATGAGAATCAGA+AGG + chr3_1:3286060-3286079 Msa0344530:CDS 30.0%
!!! TGGTATTGAAAGTTTTGACT+CGG + chr3_1:3286138-3286157 Msa0344530:CDS 30.0%
AGTATAATAGCTGGCATATA+AGG - chr3_1:3286260-3286279 None:intergenic 30.0%
GACTTCTTTAGTATAATAGC+TGG - chr3_1:3286269-3286288 None:intergenic 30.0%
AAGTCATGCTTATTCTGATT+CGG + chr3_1:3286284-3286303 Msa0344530:CDS 30.0%
! ATTTTCTTCATTTCTTCGTC+AGG - chr3_1:3286322-3286341 None:intergenic 30.0%
ATGCTAATGTGATGCTTAAT+GGG + chr3_1:3286701-3286720 Msa0344530:CDS 30.0%
AAATTGAACCTAGAACTTCT+GGG - chr3_1:3286945-3286964 None:intergenic 30.0%
AAAATTGAACCTAGAACTTC+TGG - chr3_1:3286946-3286965 None:intergenic 30.0%
!!! AGAAGTTCTAGGTTCAATTT+TGG + chr3_1:3286945-3286964 Msa0344530:CDS 30.0%
!!! GAAGTTCTAGGTTCAATTTT+GGG + chr3_1:3286946-3286965 Msa0344530:CDS 30.0%
AAGTCGATTGTCAATGTTAT+TGG + chr3_1:3286976-3286995 Msa0344530:CDS 30.0%
!! TGACTCCAATTTTGAAGAAT+AGG + chr3_1:3287043-3287062 Msa0344530:CDS 30.0%
TCATGCCTATTCTTCAAAAT+TGG - chr3_1:3287051-3287070 None:intergenic 30.0%
TCTTTCCTCTTTGAGTATAT+TGG + chr3_1:3287438-3287457 Msa0344530:CDS 30.0%
TTTCACCAATATACTCAAAG+AGG - chr3_1:3287446-3287465 None:intergenic 30.0%
CTTTGAGTATATTGGTGAAA+TGG + chr3_1:3287446-3287465 Msa0344530:CDS 30.0%
GGAGAAGTTTCAAATATGTT+TGG - chr3_1:3287636-3287655 None:intergenic 30.0%
! CTCTCTGAATTGTAGTATTT+TGG + chr3_1:3287928-3287947 Msa0344530:intron 30.0%
!!! TATTGCACCGTGTTTTATTT+TGG + chr3_1:3287998-3288017 Msa0344530:intron 30.0%
!!! TTGTTTTCTAAAGCAATGTG+TGG - chr3_1:3288105-3288124 None:intergenic 30.0%
TTTAGAAAACAATGTAGCGA+AGG + chr3_1:3288113-3288132 Msa0344530:intron 30.0%
TAAAAACGCTAAAACATCAC+AGG - chr3_1:3288151-3288170 None:intergenic 30.0%
CTACAACAGTTTATCTTAGA+TGG + chr3_1:3288175-3288194 Msa0344530:intron 30.0%
AAGACACTAGATTACGTTAT+CGG - chr3_1:3288234-3288253 None:intergenic 30.0%
!! TAAAAAATGCTACTTTGGTC+TGG + chr3_1:3288393-3288412 Msa0344530:intron 30.0%
!! AAAAAATGCTACTTTGGTCT+GGG + chr3_1:3288394-3288413 Msa0344530:intron 30.0%
! TACTCATAATTTGCCATTAG+AGG - chr3_1:3288480-3288499 None:intergenic 30.0%
GAGAGTAGTTTATGAAAACA+AGG + chr3_1:3288506-3288525 Msa0344530:intron 30.0%
!! ACACGCTTTAGAAATCTAAT+AGG - chr3_1:3288708-3288727 None:intergenic 30.0%
CTATAATAAGCAAAGCCAAA+TGG - chr3_1:3288879-3288898 None:intergenic 30.0%
GTTACAGAAGTTAAAAACCT+AGG - chr3_1:3288914-3288933 None:intergenic 30.0%
!!! GACCATGTTATTTTTCTGAT+TGG + chr3_1:3289075-3289094 Msa0344530:intron 30.0%
TGCCAATCAGAAAAATAACA+TGG - chr3_1:3289080-3289099 None:intergenic 30.0%
!!! ATGTTATTTTTCTGATTGGC+AGG + chr3_1:3289079-3289098 Msa0344530:intron 30.0%
!!! TGTTATTTTTCTGATTGGCA+GGG + chr3_1:3289080-3289099 Msa0344530:intron 30.0%
ATTGAATCAGATTCTTTCGC+CGG + chr3_1:3284416-3284435 Msa0344530:CDS 35.0%
AAAAGGCTAAGACTTCTGAT+TGG + chr3_1:3284697-3284716 Msa0344530:CDS 35.0%
AAAGGCTAAGACTTCTGATT+GGG + chr3_1:3284698-3284717 Msa0344530:CDS 35.0%
CATCTTGATCTTTGTCTCTT+CGG - chr3_1:3284954-3284973 None:intergenic 35.0%
GAAGAGACAAAGATCAAGAT+GGG + chr3_1:3284953-3284972 Msa0344530:CDS 35.0%
CTCAACAAATTATACTGCTC+CGG - chr3_1:3285119-3285138 None:intergenic 35.0%
!! AGCAGTATAATTTGTTGAGG+TGG + chr3_1:3285120-3285139 Msa0344530:CDS 35.0%
!! GCAGTATAATTTGTTGAGGT+GGG + chr3_1:3285121-3285140 Msa0344530:CDS 35.0%
ATGCTATGTTTCCACAAGAA+GGG + chr3_1:3285192-3285211 Msa0344530:CDS 35.0%
AAAACCTTATACCCTTCTTG+TGG - chr3_1:3285206-3285225 None:intergenic 35.0%
!! ACAAGAAGGGTATAAGGTTT+TGG + chr3_1:3285205-3285224 Msa0344530:CDS 35.0%
TCTTCAGGAATCTGATAAAG+TGG - chr3_1:3285305-3285324 None:intergenic 35.0%
TAATCTTCAGGCTTCATGAA+AGG - chr3_1:3285377-3285396 None:intergenic 35.0%
GTTGAATGAAGAGAATGAAG+AGG + chr3_1:3285415-3285434 Msa0344530:CDS 35.0%
! TTTGAGGCAGTTAACTGATA+AGG + chr3_1:3285526-3285545 Msa0344530:CDS 35.0%
AGATTTCTTACTCTGACAGA+CGG - chr3_1:3285933-3285952 None:intergenic 35.0%
TCTGTCAGAGTAAGAAATCT+TGG + chr3_1:3285933-3285952 Msa0344530:CDS 35.0%
CTTGTGGAAATTATAGAGCA+TGG + chr3_1:3286037-3286056 Msa0344530:CDS 35.0%
!! CTGCGTTTTTGAAAGCAATT+GGG + chr3_1:3286212-3286231 Msa0344530:CDS 35.0%
TGGGTTTATTATTCCGTTGA+TGG + chr3_1:3286231-3286250 Msa0344530:CDS 35.0%
AGTCATGCTTATTCTGATTC+GGG + chr3_1:3286285-3286304 Msa0344530:CDS 35.0%
! CAGAAGTTTCTGAAAAACTC+GGG - chr3_1:3286418-3286437 None:intergenic 35.0%
! CCAGAAGTTTCTGAAAAACT+CGG - chr3_1:3286419-3286438 None:intergenic 35.0%
!! CGAGTTTTTCAGAAACTTCT+GGG + chr3_1:3286417-3286436 Msa0344530:CDS 35.0%
! TTTTCAGAAACTTCTGGGTT+AGG + chr3_1:3286422-3286441 Msa0344530:CDS 35.0%
AAGAAACTACAAGCAACTTG+TGG + chr3_1:3286462-3286481 Msa0344530:CDS 35.0%
GATCATCTGATATTGATGCA+AGG + chr3_1:3286620-3286639 Msa0344530:CDS 35.0%
ATCTGATATTGATGCAAGGT+TGG + chr3_1:3286624-3286643 Msa0344530:CDS 35.0%
!! TTGGAAGAGCTTTTGATTGA+CGG + chr3_1:3286643-3286662 Msa0344530:CDS 35.0%
GATGCTAATGTGATGCTTAA+TGG + chr3_1:3286700-3286719 Msa0344530:CDS 35.0%
!! AATGTGATGCTTAATGGGTT+CGG + chr3_1:3286706-3286725 Msa0344530:CDS 35.0%
TTGATTGTACCACAAATCTG+AGG - chr3_1:3286775-3286794 None:intergenic 35.0%
AGATTTGTGGTACAATCAAG+TGG + chr3_1:3286776-3286795 Msa0344530:CDS 35.0%
! GTTAAACAACAAGAGTGCAA+AGG + chr3_1:3286801-3286820 Msa0344530:CDS 35.0%
CAACAGCAATTCTTGAAATG+AGG - chr3_1:3286846-3286865 None:intergenic 35.0%
AAAGATGACTCCACCTATTA+AGG + chr3_1:3287005-3287024 Msa0344530:CDS 35.0%
TTCAAAATTGGAGTCAACCT+GGG - chr3_1:3287039-3287058 None:intergenic 35.0%
GATTATTCAATAGAGTTGCC+AGG - chr3_1:3287266-3287285 None:intergenic 35.0%
ATTGAATAATCTCAAGGTGC+AGG + chr3_1:3287275-3287294 Msa0344530:CDS 35.0%
! CCATTTTGCACATTAAGTTC+TGG - chr3_1:3287402-3287421 None:intergenic 35.0%
CCAGAACTTAATGTGCAAAA+TGG + chr3_1:3287399-3287418 Msa0344530:CDS 35.0%
GTATATTGGTGAAATGGGAA+AGG + chr3_1:3287452-3287471 Msa0344530:CDS 35.0%
ATCACAGCATTTATCACATG+TGG - chr3_1:3287657-3287676 None:intergenic 35.0%
ACATGTGATAAATGCTGTGA+TGG + chr3_1:3287656-3287675 Msa0344530:CDS 35.0%
GTTCTTAATTACTGTCTCCA+AGG + chr3_1:3287720-3287739 Msa0344530:CDS 35.0%
GTGGAACATGCATAAAAGTT+AGG - chr3_1:3287958-3287977 None:intergenic 35.0%
CAACAGTTTATCTTAGATGG+TGG + chr3_1:3288178-3288197 Msa0344530:intron 35.0%
AGACACTAGATTACGTTATC+GGG - chr3_1:3288233-3288252 None:intergenic 35.0%
ATCTTCAAGGTAGAGATAAC+TGG - chr3_1:3288274-3288293 None:intergenic 35.0%
ATGTTGGATATTCAGGTGAT+TGG - chr3_1:3288356-3288375 None:intergenic 35.0%
ATCACCTGAATATCCAACAT+TGG + chr3_1:3288356-3288375 Msa0344530:intron 35.0%
TCACCTGAATATCCAACATT+GGG + chr3_1:3288357-3288376 Msa0344530:intron 35.0%
GAGTAAAGAAGTGAAAAGTG+AGG - chr3_1:3288636-3288655 None:intergenic 35.0%
!! TCTTTGTTTCTTTTGCCTGA+TGG + chr3_1:3288970-3288989 Msa0344530:intron 35.0%
! AGGAATTGGGAGTTCTAATT+TGG + chr3_1:3288994-3289013 Msa0344530:intron 35.0%
AAGATCTTCTGTTAAACCTC+TGG - chr3_1:3289176-3289195 None:intergenic 35.0%
GATCTTGTTCGTATATCTGT+TGG + chr3_1:3289190-3289209 Msa0344530:CDS 35.0%
TCGTATATCTGTTGGTATTG+AGG + chr3_1:3289198-3289217 Msa0344530:CDS 35.0%
TAGACAATGCACTTAGAACT+GGG + chr3_1:3289245-3289264 Msa0344530:CDS 35.0%
AGCTGCCAAATTAATTACAG+AGG - chr3_1:3289271-3289290 None:intergenic 35.0%
AAGATCTTCTGTTAAACCTC+TGG - chr3_1:3289176-3289195 None:intergenic 35.0%
GATCTTGTTCGTATATCTGT+TGG + chr3_1:3289190-3289209 Msa0344530:CDS 35.0%
TCGTATATCTGTTGGTATTG+AGG + chr3_1:3289198-3289217 Msa0344530:CDS 35.0%
TCTAGACAATGCATTAGAAC+TGG + chr3_1:3289512-3289531 Msa0344530:CDS 35.0%
CTAGACAATGCATTAGAACT+GGG + chr3_1:3289513-3289532 Msa0344530:CDS 35.0%
CGTCTTCTCGATTTCATCAT+CGG - chr3_1:3284100-3284119 None:intergenic 40.0%
GCAAGAAGAACGCAAGAAAA+TGG + chr3_1:3284119-3284138 Msa0344530:CDS 40.0%
CATCAGTAGCAGGAATTGAA+GGG - chr3_1:3284221-3284240 None:intergenic 40.0%
TCATCAGTAGCAGGAATTGA+AGG - chr3_1:3284222-3284241 None:intergenic 40.0%
GTTTCTTCTTCATCAGTAGC+AGG - chr3_1:3284231-3284250 None:intergenic 40.0%
GTTTCTGCGAGGAATAACTT+CGG - chr3_1:3284262-3284281 None:intergenic 40.0%
GCGTCGTCAGAATTGTTAAT+CGG - chr3_1:3284330-3284349 None:intergenic 40.0%
ATTAACAATTCTGACGACGC+TGG + chr3_1:3284330-3284349 Msa0344530:CDS 40.0%
!! ATGAATTTGTTACGTCTCGG+AGG + chr3_1:3284358-3284377 Msa0344530:CDS 40.0%
TTGACCGTGAAGATGATTAC+CGG + chr3_1:3284385-3284404 Msa0344530:CDS 40.0%
TCAGCATAAGACCTAACAGA+CGG - chr3_1:3284483-3284502 None:intergenic 40.0%
GAAGAAGAAGAAGAAGGAAG+AGG + chr3_1:3284560-3284579 Msa0344530:CDS 40.0%
! GATTTTTCCTTCTCCTTCTC+CGG - chr3_1:3284606-3284625 None:intergenic 40.0%
ATGGGATCAGAATCAGAATC+AGG + chr3_1:3284659-3284678 Msa0344530:CDS 40.0%
AATCAGAATCAGGAGGAAGA+TGG + chr3_1:3284669-3284688 Msa0344530:CDS 40.0%
TGATTCGAATGCAATGACAC+CGG + chr3_1:3284728-3284747 Msa0344530:CDS 40.0%
TCAATAACTCTACCAGGAGT+CGG - chr3_1:3284771-3284790 None:intergenic 40.0%
GTAGCATCAATAACTCTACC+AGG - chr3_1:3284777-3284796 None:intergenic 40.0%
AGAGTTATTGATGCTACTCC+TGG + chr3_1:3284780-3284799 Msa0344530:CDS 40.0%
GAGTTATTGATGCTACTCCT+GGG + chr3_1:3284781-3284800 Msa0344530:CDS 40.0%
CGAAGAGACAAAGATCAAGA+TGG + chr3_1:3284952-3284971 Msa0344530:CDS 40.0%
GATGAAACACCTGCTACTAT+GGG + chr3_1:3284975-3284994 Msa0344530:CDS 40.0%
!! CGGAGCAGTATAATTTGTTG+AGG + chr3_1:3285117-3285136 Msa0344530:CDS 40.0%
!! ATAATTTGTTGAGGTGGGAG+AGG + chr3_1:3285126-3285145 Msa0344530:CDS 40.0%
!! TAATTTGTTGAGGTGGGAGA+GGG + chr3_1:3285127-3285146 Msa0344530:CDS 40.0%
GGGATATTGAAGAGAGGAAT+CGG + chr3_1:3285147-3285166 Msa0344530:CDS 40.0%
TCAAGCTCTTCATCAGTCAA+AGG - chr3_1:3285173-3285192 None:intergenic 40.0%
GATGCTATGTTTCCACAAGA+AGG + chr3_1:3285191-3285210 Msa0344530:CDS 40.0%
! GTTTCCACAAGAAGGGTATA+AGG + chr3_1:3285199-3285218 Msa0344530:CDS 40.0%
TTCATGAAAGGTAAACCACC+AGG - chr3_1:3285365-3285384 None:intergenic 40.0%
ACTGATAAGGCTCGTGAATT+TGG + chr3_1:3285539-3285558 Msa0344530:CDS 40.0%
GGCAGTATTCGGTTAAACAA+AGG - chr3_1:3285572-3285591 None:intergenic 40.0%
AAAGTAGGCTGCATAAGCAA+CGG - chr3_1:3285593-3285612 None:intergenic 40.0%
TAACCAAAAGATGCCTCTCT+TGG - chr3_1:3285622-3285641 None:intergenic 40.0%
!!! AGAGAGGCATCTTTTGGTTA+AGG + chr3_1:3285622-3285641 Msa0344530:CDS 40.0%
TTATTTCCCTCCCTTCAACA+CGG - chr3_1:3285751-3285770 None:intergenic 40.0%
TCTAATCTCAGTAAAGCTGC+TGG + chr3_1:3285773-3285792 Msa0344530:CDS 40.0%
CTAATCTCAGTAAAGCTGCT+GGG + chr3_1:3285774-3285793 Msa0344530:CDS 40.0%
TTCAAGAAGGGCAATAAAGC+AGG - chr3_1:3285908-3285927 None:intergenic 40.0%
! TGCTTTATTGCCCTTCTTGA+AGG + chr3_1:3285907-3285926 Msa0344530:CDS 40.0%
GTAAGAAATCTTGGCAAGCT+CGG + chr3_1:3285942-3285961 Msa0344530:CDS 40.0%
TTGCTGCACAATCTTAATCC+CGG - chr3_1:3285972-3285991 None:intergenic 40.0%
TTCCACAAGAGATCTCAGAT+GGG - chr3_1:3286026-3286045 None:intergenic 40.0%
TTTCCACAAGAGATCTCAGA+TGG - chr3_1:3286027-3286046 None:intergenic 40.0%
!! GCTGCGTTTTTGAAAGCAAT+TGG + chr3_1:3286211-3286230 Msa0344530:CDS 40.0%
GCATATAAGGCTTCCATCAA+CGG - chr3_1:3286247-3286266 None:intergenic 40.0%
! AGTTTCTGAAAAACTCGGGA+AGG - chr3_1:3286414-3286433 None:intergenic 40.0%
!! CCGAGTTTTTCAGAAACTTC+TGG + chr3_1:3286416-3286435 Msa0344530:CDS 40.0%
GTTGAGATAGCAAACAAGGT+CGG + chr3_1:3286493-3286512 Msa0344530:CDS 40.0%
AAGATGAGAGTGAACCTTAC+AGG + chr3_1:3286554-3286573 Msa0344530:CDS 40.0%
GGTCATGGAAACTATTGAGA+AGG + chr3_1:3286582-3286601 Msa0344530:CDS 40.0%
CATGGAAACTATTGAGAAGG+TGG + chr3_1:3286585-3286604 Msa0344530:CDS 40.0%
CCACAAATCTGAGGAAGATA+TGG - chr3_1:3286766-3286785 None:intergenic 40.0%
CCATATCTTCCTCAGATTTG+TGG + chr3_1:3286763-3286782 Msa0344530:CDS 40.0%
TTTGTGGTACAATCAAGTGG+AGG + chr3_1:3286779-3286798 Msa0344530:CDS 40.0%
TGCCATGAGGAACAATTGAT+GGG + chr3_1:3286877-3286896 Msa0344530:CDS 40.0%
! GAACAATTGATGGGTCATCT+TGG + chr3_1:3286886-3286905 Msa0344530:CDS 40.0%
GTTGTCCTGTATGAGTATCT+TGG + chr3_1:3286910-3286929 Msa0344530:CDS 40.0%
CTTCTCCAAGATACTCATAC+AGG - chr3_1:3286918-3286937 None:intergenic 40.0%
GGAAGCAAATCCTTAATAGG+TGG - chr3_1:3287018-3287037 None:intergenic 40.0%
CTGGGAAGCAAATCCTTAAT+AGG - chr3_1:3287021-3287040 None:intergenic 40.0%
! CTATTAAGGATTTGCTTCCC+AGG + chr3_1:3287019-3287038 Msa0344530:CDS 40.0%
CTTCAAAATTGGAGTCAACC+TGG - chr3_1:3287040-3287059 None:intergenic 40.0%
! GAGAACTGTATTGACCTTGT+GGG + chr3_1:3287081-3287100 Msa0344530:CDS 40.0%
TGAGCTTCTTGAGATGCTTA+AGG + chr3_1:3287164-3287183 Msa0344530:CDS 40.0%
ATGCTTAAGGCACACAAGAA+GGG + chr3_1:3287177-3287196 Msa0344530:CDS 40.0%
AGAGCTACTGTGAACACTTT+CGG + chr3_1:3287207-3287226 Msa0344530:CDS 40.0%
GGATATATTGCGAAAGCCAT+CGG + chr3_1:3287228-3287247 Msa0344530:CDS 40.0%
TGTCTCTGCAACAATAGCAA+TGG - chr3_1:3287331-3287350 None:intergenic 40.0%
!! AGTGCTGGCAAAATTGTGAA+GGG - chr3_1:3287360-3287379 None:intergenic 40.0%
! TCCATTTGCTGAACTATGTC+TGG + chr3_1:3287610-3287629 Msa0344530:CDS 40.0%
AACAATGTAGCGAAGGTTTG+CGG + chr3_1:3288120-3288139 Msa0344530:intron 40.0%
AAACGCTAAAACATCACAGG+AGG - chr3_1:3288148-3288167 None:intergenic 40.0%
TCAAGGTAGAGATAACTGGT+GGG - chr3_1:3288270-3288289 None:intergenic 40.0%
TTCAAGGTAGAGATAACTGG+TGG - chr3_1:3288271-3288290 None:intergenic 40.0%
AGTCCCAATGTTGGATATTC+AGG - chr3_1:3288363-3288382 None:intergenic 40.0%
TATCCAACATTGGGACTGAA+CGG + chr3_1:3288366-3288385 Msa0344530:intron 40.0%
CTTTCAAGACTACACTTGCT+TGG + chr3_1:3288566-3288585 Msa0344530:intron 40.0%
AAAGTGATCGATTGCATGCT+TGG - chr3_1:3288598-3288617 None:intergenic 40.0%
TTACTCCATGCACAAAACCA+CGG + chr3_1:3288650-3288669 Msa0344530:intron 40.0%
ACACTCCAAGATATTTCACG+TGG + chr3_1:3288778-3288797 Msa0344530:intron 40.0%
CACTCCAAGATATTTCACGT+GGG + chr3_1:3288779-3288798 Msa0344530:intron 40.0%
ACTTCCCACGTGAAATATCT+TGG - chr3_1:3288786-3288805 None:intergenic 40.0%
TTTCACGTGGTGAAAGATAG+TGG + chr3_1:3288818-3288837 Msa0344530:intron 40.0%
AGTTAAAAACCTAGGGAGGA+TGG - chr3_1:3288906-3288925 None:intergenic 40.0%
CAGAAGTTAAAAACCTAGGG+AGG - chr3_1:3288910-3288929 None:intergenic 40.0%
! TGTTTCTTTTGCCTGATGGT+AGG + chr3_1:3288974-3288993 Msa0344530:intron 40.0%
! TTTTGCCTGATGGTAGGAAT+TGG + chr3_1:3288980-3288999 Msa0344530:intron 40.0%
TTTGCCTGATGGTAGGAATT+GGG + chr3_1:3288981-3289000 Msa0344530:intron 40.0%
AAAGCAAGGTAGGCTGATTA+GGG - chr3_1:3289116-3289135 None:intergenic 40.0%
TAAAGCAAGGTAGGCTGATT+AGG - chr3_1:3289117-3289136 None:intergenic 40.0%
TAATCAGCCTACCTTGCTTT+AGG + chr3_1:3289116-3289135 Msa0344530:CDS 40.0%
! ATCTGTTGGTATTGAGGATG+TGG + chr3_1:3289204-3289223 Msa0344530:CDS 40.0%
CTAGACAATGCACTTAGAAC+TGG + chr3_1:3289244-3289263 Msa0344530:CDS 40.0%
CTGGGCCTCTGTAATTAATT+TGG + chr3_1:3289263-3289282 Msa0344530:intron 40.0%
! GTCAGCAGAAAAGCATATAG+AGG - chr3_1:3289327-3289346 None:intergenic 40.0%
AAAGCAAGGTAGGCTGATTA+GGG - chr3_1:3289116-3289135 None:intergenic 40.0%
TAAAGCAAGGTAGGCTGATT+AGG - chr3_1:3289117-3289136 None:intergenic 40.0%
! ATCTGTTGGTATTGAGGATG+TGG + chr3_1:3289204-3289223 Msa0344530:CDS 40.0%
!! AAGTATCGACCTTTGAGCAA+TGG + chr3_1:3289553-3289572 Msa0344530:CDS 40.0%
!! AGTATCGACCTTTGAGCAAT+GGG + chr3_1:3289554-3289573 Msa0344530:CDS 40.0%
TAGTTCATCCCATTGCTCAA+AGG - chr3_1:3289565-3289584 None:intergenic 40.0%
ACCTTCGACACAGATCTCTA+TGG + chr3_1:3284171-3284190 Msa0344530:CDS 45.0%
AGAAACCTTCCGTCATACAC+CGG + chr3_1:3284276-3284295 Msa0344530:CDS 45.0%
ACGTTATGACCGGTGTATGA+CGG - chr3_1:3284288-3284307 None:intergenic 45.0%
TCATACACCGGTCATAACGT+CGG + chr3_1:3284288-3284307 Msa0344530:CDS 45.0%
GTTATGACCGACGTTATGAC+CGG - chr3_1:3284298-3284317 None:intergenic 45.0%
TCATAACGTCGGTCATAACG+TGG + chr3_1:3284299-3284318 Msa0344530:CDS 45.0%
GTCTCCGGTAATCATCTTCA+CGG - chr3_1:3284392-3284411 None:intergenic 45.0%
GTGAAGATGATTACCGGAGA+CGG + chr3_1:3284391-3284410 Msa0344530:CDS 45.0%
TCTGATTCAATCTCCGTCTC+CGG - chr3_1:3284407-3284426 None:intergenic 45.0%
!! GCAAAAGCATCATGTCGATC+CGG - chr3_1:3284438-3284457 None:intergenic 45.0%
TAAGACCTAACAGACGGATC+CGG - chr3_1:3284477-3284496 None:intergenic 45.0%
!! TGAGAGATGAAGCGTTGAAG+AGG + chr3_1:3284508-3284527 Msa0344530:CDS 45.0%
!! GAGAGATGAAGCGTTGAAGA+GGG + chr3_1:3284509-3284528 Msa0344530:CDS 45.0%
GGGAGAGAGAGGAAACAATT+AGG + chr3_1:3284529-3284548 Msa0344530:CDS 45.0%
AAGAAGGAAGAGGAAGAAGC+TGG + chr3_1:3284570-3284589 Msa0344530:CDS 45.0%
AGCAGAATCAACAGCAGAAG+AGG + chr3_1:3284628-3284647 Msa0344530:CDS 45.0%
AGAATCAACAGCAGAAGAGG+AGG + chr3_1:3284631-3284650 Msa0344530:CDS 45.0%
AGCAGAAGAGGAGGAATAGA+TGG + chr3_1:3284640-3284659 Msa0344530:CDS 45.0%
GCAGAAGAGGAGGAATAGAT+GGG + chr3_1:3284641-3284660 Msa0344530:CDS 45.0%
GGATCAGAATCAGAATCAGG+AGG + chr3_1:3284662-3284681 Msa0344530:CDS 45.0%
GGAGGAAGATGGTGTGAAAA+AGG + chr3_1:3284680-3284699 Msa0344530:CDS 45.0%
!! GGTGTCATTGCATTCGAATC+AGG - chr3_1:3284729-3284748 None:intergenic 45.0%
GATTCGAATGCAATGACACC+GGG + chr3_1:3284729-3284748 Msa0344530:CDS 45.0%
ATGCAATGACACCGGGAATA+TGG + chr3_1:3284736-3284755 Msa0344530:CDS 45.0%
TGCAATGACACCGGGAATAT+GGG + chr3_1:3284737-3284756 Msa0344530:CDS 45.0%
TTATTGATGCTACTCCTGGG+AGG + chr3_1:3284784-3284803 Msa0344530:CDS 45.0%
! GGTTGATTCTGATGCTACAC+CGG + chr3_1:3284845-3284864 Msa0344530:CDS 45.0%
! GTTGATTCTGATGCTACACC+GGG + chr3_1:3284846-3284865 Msa0344530:CDS 45.0%
GATGCTACTCCTAAGCTTAG+TGG + chr3_1:3284912-3284931 Msa0344530:CDS 45.0%
CTACTCCTAAGCTTAGTGGT+GGG + chr3_1:3284916-3284935 Msa0344530:CDS 45.0%
GTAATCCCACCACTAAGCTT+AGG - chr3_1:3284924-3284943 None:intergenic 45.0%
GATCTTTGTCTCTTCGGAGT+CGG - chr3_1:3284948-3284967 None:intergenic 45.0%
GGATGAAACACCTGCTACTA+TGG + chr3_1:3284974-3284993 Msa0344530:CDS 45.0%
!! TCCTGTTGGTGGTGTTGAAT+TGG + chr3_1:3285055-3285074 Msa0344530:CDS 45.0%
CTAATCGGCACATAAGAAGC+TGG - chr3_1:3285236-3285255 None:intergenic 45.0%
!! CAGCTTCTTATGTGCCGATT+AGG + chr3_1:3285234-3285253 Msa0344530:CDS 45.0%
TTCCTTGCAGGTGTCCTAAT+CGG - chr3_1:3285251-3285270 None:intergenic 45.0%
TGATAAAGTGGAGTCCCCAA+CGG - chr3_1:3285293-3285312 None:intergenic 45.0%
CAGATTCCTGAAGAGAATCG+TGG + chr3_1:3285311-3285330 Msa0344530:CDS 45.0%
GATGTTCCTAAAGAAGCTCC+TGG + chr3_1:3285344-3285363 Msa0344530:CDS 45.0%
AAACCACCAGGAGCTTCTTT+AGG - chr3_1:3285353-3285372 None:intergenic 45.0%
GAATGAAGAGGAGTTGTCTC+CGG + chr3_1:3285427-3285446 Msa0344530:CDS 45.0%
TTCCTCTCTTTCTGCTCATC+CGG - chr3_1:3285449-3285468 None:intergenic 45.0%
! CTCAAAGCAGTTTTCCTCTG+CGG - chr3_1:3285512-3285531 None:intergenic 45.0%
GCATAAGCAACGGCAGTATT+CGG - chr3_1:3285583-3285602 None:intergenic 45.0%
GTTGCTTATGCAGCCTACTT+TGG + chr3_1:3285592-3285611 Msa0344530:CDS 45.0%
ACTACTATGCCCGTGTTGAA+GGG + chr3_1:3285738-3285757 Msa0344530:CDS 45.0%
TATTTCCCTCCCTTCAACAC+GGG - chr3_1:3285750-3285769 None:intergenic 45.0%
CTACTATGATTGCTGCCATG+AGG + chr3_1:3285801-3285820 Msa0344530:CDS 45.0%
GTTATCTATGTCAGGCCTCA+TGG - chr3_1:3285819-3285838 None:intergenic 45.0%
TCCACAAGAGATCTCAGATG+GGG - chr3_1:3286025-3286044 None:intergenic 45.0%
GTGTTGAAGCCATTGTGGAA+GGG + chr3_1:3286160-3286179 Msa0344530:CDS 45.0%
!! AGCCATTGTGGAAGGGTATT+AGG + chr3_1:3286167-3286186 Msa0344530:CDS 45.0%
TGCCTAATACCCTTCCACAA+TGG - chr3_1:3286172-3286191 None:intergenic 45.0%
TATTAGGCAACACCGTGGTA+AGG + chr3_1:3286183-3286202 Msa0344530:CDS 45.0%
!! AAACAGTGTGTGAGCACTGA+GGG + chr3_1:3286358-3286377 Msa0344530:CDS 45.0%
! TCAGAAACTTCTGGGTTAGG+AGG + chr3_1:3286425-3286444 Msa0344530:CDS 45.0%
! AAACTTCTGGGTTAGGAGGA+TGG + chr3_1:3286429-3286448 Msa0344530:CDS 45.0%
GACGGTTGAGATAGCAAACA+AGG + chr3_1:3286489-3286508 Msa0344530:CDS 45.0%
!! GTCGGTGTTGCTGATATTGT+TGG + chr3_1:3286511-3286530 Msa0344530:CDS 45.0%
TGAGAAGGTGGTCACTAACT+TGG + chr3_1:3286597-3286616 Msa0344530:CDS 45.0%
GAGAAGGTGGTCACTAACTT+GGG + chr3_1:3286598-3286617 Msa0344530:CDS 45.0%
! ATCACTAGTCTGCTCTTGGA+AGG - chr3_1:3286680-3286699 None:intergenic 45.0%
! CATCATCACTAGTCTGCTCT+TGG - chr3_1:3286684-3286703 None:intergenic 45.0%
! ACAACAAGAGTGCAAAGGTG+AGG + chr3_1:3286806-3286825 Msa0344530:CDS 45.0%
GTGCCATGAGGAACAATTGA+TGG + chr3_1:3286876-3286895 Msa0344530:CDS 45.0%
GACCCATCAATTGTTCCTCA+TGG - chr3_1:3286882-3286901 None:intergenic 45.0%
!! GAAGAGTACCCAGAAGTTCT+AGG + chr3_1:3286934-3286953 Msa0344530:CDS 45.0%
GAATAGGCATGAGAAAGTCC+AGG + chr3_1:3287059-3287078 Msa0344530:CDS 45.0%
CAAGGTCAATACAGTTCTCC+TGG - chr3_1:3287080-3287099 None:intergenic 45.0%
! GGAGAACTGTATTGACCTTG+TGG + chr3_1:3287080-3287099 Msa0344530:CDS 45.0%
! ACTGTATTGACCTTGTGGGT+AGG + chr3_1:3287085-3287104 Msa0344530:CDS 45.0%
AGTTTGTACCTGCCAGAGAA+TGG + chr3_1:3287127-3287146 Msa0344530:CDS 45.0%
ACAGATCCTCATCCATTCTC+TGG - chr3_1:3287142-3287161 None:intergenic 45.0%
GATGCTTAAGGCACACAAGA+AGG + chr3_1:3287176-3287195 Msa0344530:CDS 45.0%
ATAATCTCAAGGTGCAGGAG+AGG + chr3_1:3287280-3287299 Msa0344530:CDS 45.0%
AACAATAGCAATGGCCACAG+TGG - chr3_1:3287322-3287341 None:intergenic 45.0%
!! CAGTGCTGGCAAAATTGTGA+AGG - chr3_1:3287361-3287380 None:intergenic 45.0%
CGATACTCATTCATCAGTGC+TGG - chr3_1:3287375-3287394 None:intergenic 45.0%
!! ATGAGAGCATCCTCAAGCAA+AGG - chr3_1:3287498-3287517 None:intergenic 45.0%
TTTGCTTGAGGATGCTCTCA+TGG + chr3_1:3287497-3287516 Msa0344530:CDS 45.0%
! TGGACAGGGATTTGGTTCAT+AGG + chr3_1:3287517-3287536 Msa0344530:CDS 45.0%
GCCAGACATAGTTCAGCAAA+TGG - chr3_1:3287614-3287633 None:intergenic 45.0%
! CTGTGATGGAAGCCATTGAA+GGG + chr3_1:3287670-3287689 Msa0344530:CDS 45.0%
AAGAACAACAGCAGAACCCA+AGG - chr3_1:3287706-3287725 None:intergenic 45.0%
AGTACACCTCCCTAACTTTC+CGG - chr3_1:3287761-3287780 None:intergenic 45.0%
CTCTCTGTATATTGGAGCTC+AGG + chr3_1:3287794-3287813 Msa0344530:CDS 45.0%
TGTGCTCATCCTCTAGTGAT+GGG - chr3_1:3287839-3287858 None:intergenic 45.0%
TTGTGCTCATCCTCTAGTGA+TGG - chr3_1:3287840-3287859 None:intergenic 45.0%
ATTCCGTTCAGTCCCAATGT+TGG - chr3_1:3288372-3288391 None:intergenic 45.0%
TTAAATAGGAATGGCTGCCG+TGG - chr3_1:3288670-3288689 None:intergenic 45.0%
TGTAGATGTCGATGGACAGT+GGG - chr3_1:3288761-3288780 None:intergenic 45.0%
TCTTGGAGTGTAGATGTCGA+TGG - chr3_1:3288769-3288788 None:intergenic 45.0%
GTGACTCTTCAGCACTATAG+AGG + chr3_1:3288840-3288859 Msa0344530:intron 45.0%
! GGAGTACTTGCTAAGCCATT+TGG + chr3_1:3288861-3288880 Msa0344530:intron 45.0%
AAAAACCTAGGGAGGATGGT+AGG - chr3_1:3288902-3288921 None:intergenic 45.0%
AACTCCCAATTCCTACCATC+AGG - chr3_1:3288988-3289007 None:intergenic 45.0%
! GTCAGCGGAAAAGCATATAG+AGG - chr3_1:3289058-3289077 None:intergenic 45.0%
CGTGTGACATAAAGCAAGGT+AGG - chr3_1:3289395-3289414 None:intergenic 45.0%
CTAGCGTGTGACATAAAGCA+AGG - chr3_1:3289399-3289418 None:intergenic 45.0%
GCCATAGAGATCTGTGTCGA+AGG - chr3_1:3284175-3284194 None:intergenic 50.0%
! TATGACGGAAGGTTTCTGCG+AGG - chr3_1:3284273-3284292 None:intergenic 50.0%
! TATGACCGGTGTATGACGGA+AGG - chr3_1:3284284-3284303 None:intergenic 50.0%
! CGACATGATGCTTTTGCTGC+TGG + chr3_1:3284441-3284460 Msa0344530:CDS 50.0%
AAGACCTAACAGACGGATCC+GGG - chr3_1:3284476-3284495 None:intergenic 50.0%
GGAAGAGGAAGAAGCTGGTA+AGG + chr3_1:3284575-3284594 Msa0344530:CDS 50.0%
GGTGTAGCATCCCATATTCC+CGG - chr3_1:3284750-3284769 None:intergenic 50.0%
TCCTGGGAGGAGGAATAGAT+GGG + chr3_1:3284797-3284816 Msa0344530:CDS 50.0%
TCAGAATCAACCAACCTCCC+CGG - chr3_1:3284837-3284856 None:intergenic 50.0%
!! TTACACCTGGTGGTGCTACT+TGG + chr3_1:3284889-3284908 Msa0344530:CDS 50.0%
!! TACACCTGGTGGTGCTACTT+GGG + chr3_1:3284890-3284909 Msa0344530:CDS 50.0%
GCTACTCCTAAGCTTAGTGG+TGG + chr3_1:3284915-3284934 Msa0344530:CDS 50.0%
GTTGCACTTCCCATAGTAGC+AGG - chr3_1:3284987-3285006 None:intergenic 50.0%
! GGAAGTGCAACTCCATTACC+TGG + chr3_1:3284996-3285015 Msa0344530:CDS 50.0%
!! ACACCTGGTGTTACTCCTGT+TGG + chr3_1:3285041-3285060 Msa0344530:CDS 50.0%
GCCAATTCAACACCACCAAC+AGG - chr3_1:3285059-3285078 None:intergenic 50.0%
CTACTCCTGGTGCTTTGCAA+GGG + chr3_1:3285084-3285103 Msa0344530:CDS 50.0%
TTTGCAAGGGTCGTTTACGC+CGG + chr3_1:3285097-3285116 Msa0344530:CDS 50.0%
GGGAGAGGGATATTGAAGAG+AGG + chr3_1:3285141-3285160 Msa0344530:CDS 50.0%
TCGGCACATAAGAAGCTGGA+GGG - chr3_1:3285232-3285251 None:intergenic 50.0%
ATCGGCACATAAGAAGCTGG+AGG - chr3_1:3285233-3285252 None:intergenic 50.0%
GTAGCAAGAAGCTTCCTTGC+AGG - chr3_1:3285263-3285282 None:intergenic 50.0%
TGCTGACCACGATTCTCTTC+AGG - chr3_1:3285320-3285339 None:intergenic 50.0%
GTTCCTAAAGAAGCTCCTGG+TGG + chr3_1:3285347-3285366 Msa0344530:CDS 50.0%
! AAAGCAGTTTTCCTCTGCGG+TGG - chr3_1:3285509-3285528 None:intergenic 50.0%
CGCAGAGGAAAACTGCTTTG+AGG + chr3_1:3285510-3285529 Msa0344530:CDS 50.0%
!! AAGGCTCGTGAATTTGGTGC+TGG + chr3_1:3285545-3285564 Msa0344530:CDS 50.0%
GCTTATGCAGCCTACTTTGG+AGG + chr3_1:3285595-3285614 Msa0344530:CDS 50.0%
CTCTCTTGGTCCTCCAAAGT+AGG - chr3_1:3285608-3285627 None:intergenic 50.0%
! CTACTTTGGAGGACCAAGAG+AGG + chr3_1:3285606-3285625 Msa0344530:CDS 50.0%
!!! GGACCAAGAGAGGCATCTTT+TGG + chr3_1:3285616-3285635 Msa0344530:CDS 50.0%
GACTACTATGCCCGTGTTGA+AGG + chr3_1:3285737-3285756 Msa0344530:CDS 50.0%
TCTCAGTAAAGCTGCTGGGT+TGG + chr3_1:3285778-3285797 Msa0344530:CDS 50.0%
! AGTGTCGTTGCATCTGCTCT+CGG + chr3_1:3285878-3285897 Msa0344530:CDS 50.0%
TGACAGACGGCCTTCAAGAA+GGG - chr3_1:3285920-3285939 None:intergenic 50.0%
!! ACTCGGTGTTGAAGCCATTG+TGG + chr3_1:3286155-3286174 Msa0344530:CDS 50.0%
! GGTGTTGAAGCCATTGTGGA+AGG + chr3_1:3286159-3286178 Msa0344530:CDS 50.0%
!! AAGGGTATTAGGCAACACCG+TGG + chr3_1:3286178-3286197 Msa0344530:CDS 50.0%
! GAAACAGTGTGTGAGCACTG+AGG + chr3_1:3286357-3286376 Msa0344530:CDS 50.0%
CAAGCAACTTGTGGAGACGA+CGG + chr3_1:3286471-3286490 Msa0344530:CDS 50.0%
GAGTGAACCTTACAGGCGAA+TGG + chr3_1:3286561-3286580 Msa0344530:CDS 50.0%
ACCTTACAGGCGAATGGTCA+TGG + chr3_1:3286567-3286586 Msa0344530:CDS 50.0%
TCCATGACCATTCGCCTGTA+AGG - chr3_1:3286571-3286590 None:intergenic 50.0%
TGTCATGAAGCAGTGCCATG+AGG + chr3_1:3286864-3286883 Msa0344530:CDS 50.0%
GATCAGCAATCCTACCCACA+AGG - chr3_1:3287098-3287117 None:intergenic 50.0%
TGGGTAGGATTGCTGATCGT+GGG + chr3_1:3287100-3287119 Msa0344530:CDS 50.0%
TACCTGCCAGAGAATGGATG+AGG + chr3_1:3287133-3287152 Msa0344530:CDS 50.0%
ATCCTCATCCATTCTCTGGC+AGG - chr3_1:3287138-3287157 None:intergenic 50.0%
TGCTGTGACTCCTTTGCTTG+AGG + chr3_1:3287485-3287504 Msa0344530:CDS 50.0%
TTGAGGATGCTCTCATGGAC+AGG + chr3_1:3287502-3287521 Msa0344530:CDS 50.0%
TGAGGATGCTCTCATGGACA+GGG + chr3_1:3287503-3287522 Msa0344530:CDS 50.0%
TGCTCTCATGGACAGGGATT+TGG + chr3_1:3287509-3287528 Msa0344530:CDS 50.0%
! GCTGTGATGGAAGCCATTGA+AGG + chr3_1:3287669-3287688 Msa0344530:CDS 50.0%
TGGAAGCCATTGAAGGGATG+AGG + chr3_1:3287676-3287695 Msa0344530:CDS 50.0%
GGAAGCCATTGAAGGGATGA+GGG + chr3_1:3287677-3287696 Msa0344530:CDS 50.0%
GTACACCTCCCTAACTTTCC+GGG - chr3_1:3287760-3287779 None:intergenic 50.0%
! GGAAAGTTAGGGAGGTGTAC+TGG + chr3_1:3287760-3287779 Msa0344530:CDS 50.0%
TGCAGCATACCCATCACTAG+AGG + chr3_1:3287827-3287846 Msa0344530:CDS 50.0%
GACAGTCTGCGACTAAGTCA+AGG - chr3_1:3288455-3288474 None:intergenic 50.0%
CGCAGACTGTCAACCTCTAA+TGG + chr3_1:3288464-3288483 Msa0344530:intron 50.0%
GTGATCGATTGCATGCTTGG+AGG - chr3_1:3288595-3288614 None:intergenic 50.0%
TCGATGGACAGTGGGTACTT+GGG - chr3_1:3288753-3288772 None:intergenic 50.0%
GTGTAGATGTCGATGGACAG+TGG - chr3_1:3288762-3288781 None:intergenic 50.0%
TATAGCCTACCATCCTCCCT+AGG + chr3_1:3288894-3288913 Msa0344530:intron 50.0%
CGTGTGACCTAAAGCAAGGT+AGG - chr3_1:3289126-3289145 None:intergenic 50.0%
CTAGCGTGTGACCTAAAGCA+AGG - chr3_1:3289130-3289149 None:intergenic 50.0%
CTGTTAAACCTCTGGTCTCG+CGG - chr3_1:3289168-3289187 None:intergenic 50.0%
CTGTTAAACCTCTGGTCTCG+CGG - chr3_1:3289168-3289187 None:intergenic 50.0%
TGCTGCTGGTGAGAAAACCC+CGG + chr3_1:3284455-3284474 Msa0344530:CDS 55.0%
AAACCCCGGATCCGTCTGTT+AGG + chr3_1:3284469-3284488 Msa0344530:CDS 55.0%
AGACCTAACAGACGGATCCG+GGG - chr3_1:3284475-3284494 None:intergenic 55.0%
! AGCGTTGAAGAGGGAGAGAG+AGG + chr3_1:3284518-3284537 Msa0344530:CDS 55.0%
AGAAGCTGGTAAGGTTGCGC+CGG + chr3_1:3284584-3284603 Msa0344530:CDS 55.0%
TTGATGCTACTCCTGGGAGG+AGG + chr3_1:3284787-3284806 Msa0344530:CDS 55.0%
CTCCTGGGAGGAGGAATAGA+TGG + chr3_1:3284796-3284815 Msa0344530:CDS 55.0%
TCCCATCTATTCCTCCTCCC+AGG - chr3_1:3284801-3284820 None:intergenic 55.0%
GATTCTGATGCTACACCGGG+TGG + chr3_1:3284849-3284868 Msa0344530:CDS 55.0%
GCAGGTGTAGCACCAGGTAA+TGG - chr3_1:3285011-3285030 None:intergenic 55.0%
CCAGGTGTATAAGCAGCAGC+AGG - chr3_1:3285029-3285048 None:intergenic 55.0%
! CCTGCTGCTGCTTATACACC+TGG + chr3_1:3285026-3285045 Msa0344530:CDS 55.0%
CCACCAACAGGAGTAACACC+AGG - chr3_1:3285047-3285066 None:intergenic 55.0%
!! CCTGGTGTTACTCCTGTTGG+TGG + chr3_1:3285044-3285063 Msa0344530:CDS 55.0%
GAATTGGCCACACCTACTCC+TGG + chr3_1:3285071-3285090 Msa0344530:CDS 55.0%
! CAAAGCACCAGGAGTAGGTG+TGG - chr3_1:3285081-3285100 None:intergenic 55.0%
! CCTTGCAAAGCACCAGGAGT+AGG - chr3_1:3285086-3285105 None:intergenic 55.0%
CCTACTCCTGGTGCTTTGCA+AGG + chr3_1:3285083-3285102 Msa0344530:CDS 55.0%
! AACGACCCTTGCAAAGCACC+AGG - chr3_1:3285092-3285111 None:intergenic 55.0%
! TGCCGATTAGGACACCTGCA+AGG + chr3_1:3285246-3285265 Msa0344530:CDS 55.0%
TCTTGCTACACCTACGCCGT+TGG + chr3_1:3285274-3285293 Msa0344530:CDS 55.0%
CTTGCTACACCTACGCCGTT+GGG + chr3_1:3285275-3285294 Msa0344530:CDS 55.0%
TTGCTACACCTACGCCGTTG+GGG + chr3_1:3285276-3285295 Msa0344530:CDS 55.0%
CTCCGGATGAGCAGAAAGAG+AGG + chr3_1:3285444-3285463 Msa0344530:CDS 55.0%
ACTATGCCCGTGTTGAAGGG+AGG + chr3_1:3285741-3285760 Msa0344530:CDS 55.0%
CTATGCCCGTGTTGAAGGGA+GGG + chr3_1:3285742-3285761 Msa0344530:CDS 55.0%
CTGACAGACGGCCTTCAAGA+AGG - chr3_1:3285921-3285940 None:intergenic 55.0%
! GCCCCATCTGAGATCTCTTG+TGG + chr3_1:3286021-3286040 Msa0344530:CDS 55.0%
AGCAGCAGCTTCAGCAAGTG+CGG - chr3_1:3286113-3286132 None:intergenic 55.0%
GCTGAAGCTGCTGCTCCTTA+TGG + chr3_1:3286118-3286137 Msa0344530:CDS 55.0%
! CTGGGTTAGGAGGATGGCTT+TGG + chr3_1:3286435-3286454 Msa0344530:CDS 55.0%
GGCGCAGTTGTAAACTCGCT+CGG + chr3_1:3286727-3286746 Msa0344530:CDS 55.0%
GCGCAGTTGTAAACTCGCTC+GGG + chr3_1:3286728-3286747 Msa0344530:CDS 55.0%
GTGGGTAGGATTGCTGATCG+TGG + chr3_1:3287099-3287118 Msa0344530:CDS 55.0%
GGGTAGGATTGCTGATCGTG+GGG + chr3_1:3287101-3287120 Msa0344530:CDS 55.0%
AGAGTTGCCAGGACATCCTG+TGG - chr3_1:3287255-3287274 None:intergenic 55.0%
GAATCGTGTGTGCACCACTG+TGG + chr3_1:3287305-3287324 Msa0344530:CDS 55.0%
TGCATCTGCCGTGAAGCACA+TGG + chr3_1:3287548-3287567 Msa0344530:CDS 55.0%
TCCCAGTGCCATGTGCTTCA+CGG - chr3_1:3287559-3287578 None:intergenic 55.0%
GGCTACCCTCATCCCTTCAA+TGG - chr3_1:3287685-3287704 None:intergenic 55.0%
TGAAGGGATGAGGGTAGCCT+TGG + chr3_1:3287686-3287705 Msa0344530:CDS 55.0%
GAAGGGATGAGGGTAGCCTT+GGG + chr3_1:3287687-3287706 Msa0344530:CDS 55.0%
GTCGATGGACAGTGGGTACT+TGG - chr3_1:3288754-3288773 None:intergenic 55.0%
TGGTAAGGTTGCGCCGGAGA+AGG + chr3_1:3284590-3284609 Msa0344530:CDS 60.0%
!! TGGGATGCTACACCGACTCC+TGG + chr3_1:3284756-3284775 Msa0344530:CDS 60.0%
ATGGGATGAGACACCGACGC+CGG + chr3_1:3284815-3284834 Msa0344530:CDS 60.0%
!! ACGCCTGGTGGTGTTACACC+TGG + chr3_1:3284876-3284895 Msa0344530:CDS 60.0%
CCACCAGGTGTAACACCACC+AGG - chr3_1:3284882-3284901 None:intergenic 60.0%
!! CCTGGTGGTGTTACACCTGG+TGG + chr3_1:3284879-3284898 Msa0344530:CDS 60.0%
GCATCCCAAGTAGCACCACC+AGG - chr3_1:3284897-3284916 None:intergenic 60.0%
TCTTGGCAAGCTCGGCACAC+CGG + chr3_1:3285950-3285969 Msa0344530:CDS 60.0%
GCAACACCGTGGTAAGGTGC+TGG + chr3_1:3286189-3286208 Msa0344530:CDS 60.0%
ACGCAGCCAGCACCTTACCA+CGG - chr3_1:3286198-3286217 None:intergenic 60.0%
!! GTGTGTGAGCACTGAGGGTG+TGG + chr3_1:3286363-3286382 Msa0344530:CDS 60.0%
TGCGAAAGCCATCGGACCAC+AGG + chr3_1:3287236-3287255 Msa0344530:CDS 60.0%
CAGGACATCCTGTGGTCCGA+TGG - chr3_1:3287247-3287266 None:intergenic 60.0%
CATCGGACCACAGGATGTCC+TGG + chr3_1:3287245-3287264 Msa0344530:CDS 60.0%
TGCCGTGAAGCACATGGCAC+TGG + chr3_1:3287554-3287573 Msa0344530:CDS 60.0%
GCCGTGAAGCACATGGCACT+GGG + chr3_1:3287555-3287574 Msa0344530:CDS 60.0%
! GAAGCACATGGCACTGGGAG+TGG + chr3_1:3287560-3287579 Msa0344530:CDS 60.0%
!! GCACTGGGAGTGGCTGGTTT+GGG + chr3_1:3287570-3287589 Msa0344530:CDS 60.0%
!! AGTGGCTGGTTTGGGTTGCG+AGG + chr3_1:3287578-3287597 Msa0344530:CDS 60.0%
!! TTTGGGTTGCGAGGATGCGC+TGG + chr3_1:3287587-3287606 Msa0344530:CDS 60.0%
AAGGACTGTTCCACCCTGCC+CGG + chr3_1:3287739-3287758 Msa0344530:CDS 60.0%
TCCACCCTGCCCGGAAAGTT+AGG + chr3_1:3287748-3287767 Msa0344530:CDS 60.0%
CCACCCTGCCCGGAAAGTTA+GGG + chr3_1:3287749-3287768 Msa0344530:CDS 60.0%
CCTCCCTAACTTTCCGGGCA+GGG - chr3_1:3287755-3287774 None:intergenic 60.0%
ACCTCCCTAACTTTCCGGGC+AGG - chr3_1:3287756-3287775 None:intergenic 60.0%
!!! GGCTGCCGTGGTTTTGTGCA+TGG - chr3_1:3288658-3288677 None:intergenic 60.0%
GGTTGCGCCGGAGAAGGAGA+AGG + chr3_1:3284596-3284615 Msa0344530:CDS 65.0%
TGGGATGAGACACCGACGCC+GGG + chr3_1:3284816-3284835 Msa0344530:CDS 65.0%
TCAACCAACCTCCCCGGCGT+CGG - chr3_1:3284831-3284850 None:intergenic 65.0%
ACACCGGGTGGTGTAACGCC+TGG + chr3_1:3284861-3284880 Msa0344530:CDS 65.0%
CCACCAGGCGTTACACCACC+CGG - chr3_1:3284867-3284886 None:intergenic 65.0%
GCAGCAGCAGGTGTAGCACC+AGG - chr3_1:3285017-3285036 None:intergenic 65.0%
AGTGGAGTCCCCAACGGCGT+AGG - chr3_1:3285287-3285306 None:intergenic 65.0%
CTTGGCAAGCTCGGCACACC+GGG + chr3_1:3285951-3285970 Msa0344530:CDS 65.0%
! CACATGGCACTGGGAGTGGC+TGG + chr3_1:3287564-3287583 Msa0344530:CDS 65.0%
! GGCACTGGGAGTGGCTGGTT+TGG + chr3_1:3287569-3287588 Msa0344530:CDS 65.0%
GGGCAGGGTGGAACAGTCCT+TGG - chr3_1:3287740-3287759 None:intergenic 65.0%
CCCTAACTTTCCGGGCAGGG+TGG - chr3_1:3287752-3287771 None:intergenic 65.0%
CCCTGCCCGGAAAGTTAGGG+AGG + chr3_1:3287752-3287771 Msa0344530:CDS 65.0%
GGGATGAGACACCGACGCCG+GGG + chr3_1:3284817-3284836 Msa0344530:CDS 70.0%
ATGAGACACCGACGCCGGGG+AGG + chr3_1:3284820-3284839 Msa0344530:CDS 70.0%
CCGGGTGGTGTAACGCCTGG+TGG + chr3_1:3284864-3284883 Msa0344530:CDS 70.0%
AGAACGGCACGCCACCGCAG+AGG + chr3_1:3285495-3285514 Msa0344530:CDS 70.0%
! CTGGTCTCGCGGACTGCAGC+AGG - chr3_1:3289157-3289176 None:intergenic 70.0%
GCTGCAGTCCGCGAGACCAG+AGG + chr3_1:3289157-3289176 Msa0344530:CDS 70.0%
! CTGGTCTCGCGGACTGCAGC+AGG - chr3_1:3289157-3289176 None:intergenic 70.0%
GCTGCAGTCCGCGAGACCAG+AGG + chr3_1:3289157-3289176 Msa0344530:CDS 70.0%
GACACCGACGCCGGGGAGGT+TGG + chr3_1:3284824-3284843 Msa0344530:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 3284090 3289602 3284090 ID=Msa0344530;Name=Msa0344530
chr3_1 mRNA 3284090 3289602 3284090 ID=Msa0344530-mRNA-1;Parent=Msa0344530;Name=Msa0344530-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|3|0|1378
chr3_1 exon 3284090 3287870 3284090 ID=Msa0344530-mRNA-1:exon:1026;Parent=Msa0344530-mRNA-1
chr3_1 exon 3289101 3289272 3289101 ID=Msa0344530-mRNA-1:exon:1027;Parent=Msa0344530-mRNA-1
chr3_1 exon 3289419 3289602 3289419 ID=Msa0344530-mRNA-1:exon:1028;Parent=Msa0344530-mRNA-1
chr3_1 CDS 3284090 3287870 3284090 ID=Msa0344530-mRNA-1:cds;Parent=Msa0344530-mRNA-1
chr3_1 CDS 3289101 3289272 3289101 ID=Msa0344530-mRNA-1:cds;Parent=Msa0344530-mRNA-1
chr3_1 CDS 3289419 3289602 3289419 ID=Msa0344530-mRNA-1:cds;Parent=Msa0344530-mRNA-1
Gene Sequence

>Msa0344530

ATGGCTTCCGATGATGAAATCGAGAAGACGCAAGAAGAACGCAAGAAAATGGAAAAACAACTCGCATCTCTCACTGAACTCACCTTCGACACAGATCTCTATGGCGATAGCGATAAAGCTTCATACTTCCCTTCAATTCCTGCTACTGATGAAGAAGAAACTCACGATTCCGAAGTTATTCCTCGCAGAAACCTTCCGTCATACACCGGTCATAACGTCGGTCATAACGTGGCTGTTCCGATTAACAATTCTGACGACGCTGGAGATAATGAATTTGTTACGTCTCGGAGGATAATTGACCGTGAAGATGATTACCGGAGACGGAGATTGAATCAGATTCTTTCGCCGGATCGACATGATGCTTTTGCTGCTGGTGAGAAAACCCCGGATCCGTCTGTTAGGTCTTATGCTGATATTATGAGAGATGAAGCGTTGAAGAGGGAGAGAGAGGAAACAATTAGGTTAATTTCGAAGAAGAAGAAGAAGGAAGAGGAAGAAGCTGGTAAGGTTGCGCCGGAGAAGGAGAAGGAAAAATCTCAGCAGAATCAACAGCAGAAGAGGAGGAATAGATGGGATCAGAATCAGAATCAGGAGGAAGATGGTGTGAAAAAGGCTAAGACTTCTGATTGGGATGCACCTGATTCGAATGCAATGACACCGGGAATATGGGATGCTACACCGACTCCTGGTAGAGTTATTGATGCTACTCCTGGGAGGAGGAATAGATGGGATGAGACACCGACGCCGGGGAGGTTGGTTGATTCTGATGCTACACCGGGTGGTGTAACGCCTGGTGGTGTTACACCTGGTGGTGCTACTTGGGATGCTACTCCTAAGCTTAGTGGTGGGATTACTCCGACTCCGAAGAGACAAAGATCAAGATGGGATGAAACACCTGCTACTATGGGAAGTGCAACTCCATTACCTGGTGCTACACCTGCTGCTGCTTATACACCTGGTGTTACTCCTGTTGGTGGTGTTGAATTGGCCACACCTACTCCTGGTGCTTTGCAAGGGTCGTTTACGCCGGAGCAGTATAATTTGTTGAGGTGGGAGAGGGATATTGAAGAGAGGAATCGGCCTTTGACTGATGAAGAGCTTGATGCTATGTTTCCACAAGAAGGGTATAAGGTTTTGGACCCTCCAGCTTCTTATGTGCCGATTAGGACACCTGCAAGGAAGCTTCTTGCTACACCTACGCCGTTGGGGACTCCACTTTATCAGATTCCTGAAGAGAATCGTGGTCAGCAGTTTGATGTTCCTAAAGAAGCTCCTGGTGGTTTACCTTTCATGAAGCCTGAAGATTATCAGTATTTTGGGGCTTTGTTGAATGAAGAGAATGAAGAGGAGTTGTCTCCGGATGAGCAGAAAGAGAGGAAGATTATGAAGCTTTTGCTTAAAGTGAAGAACGGCACGCCACCGCAGAGGAAAACTGCTTTGAGGCAGTTAACTGATAAGGCTCGTGAATTTGGTGCTGGTCCTTTGTTTAACCGAATACTGCCGTTGCTTATGCAGCCTACTTTGGAGGACCAAGAGAGGCATCTTTTGGTTAAGGTAATTGATAGAGTTCTTTATAAATTGGATGAATTGGTTCGGCCTTATGTGCATAAGATTCTTGTTGTTATTGAGCCCCTTTTGATTGATGAAGACTACTATGCCCGTGTTGAAGGGAGGGAAATAATATCTAATCTCAGTAAAGCTGCTGGGTTGGCTACTATGATTGCTGCCATGAGGCCTGACATAGATAACATTGATGAATATGTTAGGAATACTACTGCTAGAGCTTTTAGTGTCGTTGCATCTGCTCTCGGTATTCCTGCTTTATTGCCCTTCTTGAAGGCCGTCTGTCAGAGTAAGAAATCTTGGCAAGCTCGGCACACCGGGATTAAGATTGTGCAGCAAATTGCTATTTTGATTGGTTGTGCTGTGTTGCCCCATCTGAGATCTCTTGTGGAAATTATAGAGCATGGTTTGAATGATGAGAATCAGAAGGTGAGAACGATTACTGCTTTGTCTCTTGCCGCACTTGCTGAAGCTGCTGCTCCTTATGGTATTGAAAGTTTTGACTCGGTGTTGAAGCCATTGTGGAAGGGTATTAGGCAACACCGTGGTAAGGTGCTGGCTGCGTTTTTGAAAGCAATTGGGTTTATTATTCCGTTGATGGAAGCCTTATATGCCAGCTATTATACTAAAGAAGTCATGCTTATTCTGATTCGGGAGTTTCAGTCACCTGACGAAGAAATGAAGAAAATTGTTTTGAAAGTGGTGAAACAGTGTGTGAGCACTGAGGGTGTGGAAGCCGAGTATATTAGAACTGATATCCTTCCCGAGTTTTTCAGAAACTTCTGGGTTAGGAGGATGGCTTTGGATAGAAGAAACTACAAGCAACTTGTGGAGACGACGGTTGAGATAGCAAACAAGGTCGGTGTTGCTGATATTGTTGGAAGAATTGTTGAAGATCTTAAAGATGAGAGTGAACCTTACAGGCGAATGGTCATGGAAACTATTGAGAAGGTGGTCACTAACTTGGGATCATCTGATATTGATGCAAGGTTGGAAGAGCTTTTGATTGACGGTATTCTTTATGCCTTCCAAGAGCAGACTAGTGATGATGCTAATGTGATGCTTAATGGGTTCGGCGCAGTTGTAAACTCGCTCGGGCAGAGAGTAAAACCATATCTTCCTCAGATTTGTGGTACAATCAAGTGGAGGTTAAACAACAAGAGTGCAAAGGTGAGGCAGCAAGCAGCAGACCTCATTTCAAGAATTGCTGTTGTCATGAAGCAGTGCCATGAGGAACAATTGATGGGTCATCTTGGTGTTGTCCTGTATGAGTATCTTGGAGAAGAGTACCCAGAAGTTCTAGGTTCAATTTTGGGTGCTCTCAAGTCGATTGTCAATGTTATTGGTATGACAAAGATGACTCCACCTATTAAGGATTTGCTTCCCAGGTTGACTCCAATTTTGAAGAATAGGCATGAGAAAGTCCAGGAGAACTGTATTGACCTTGTGGGTAGGATTGCTGATCGTGGGGCTGAGTTTGTACCTGCCAGAGAATGGATGAGGATCTGTTTTGAGCTTCTTGAGATGCTTAAGGCACACAAGAAGGGAATTCGTAGAGCTACTGTGAACACTTTCGGATATATTGCGAAAGCCATCGGACCACAGGATGTCCTGGCAACTCTATTGAATAATCTCAAGGTGCAGGAGAGGCAGAATCGTGTGTGCACCACTGTGGCCATTGCTATTGTTGCAGAGACATGTTCACCCTTCACAATTTTGCCAGCACTGATGAATGAGTATCGTGTGCCAGAACTTAATGTGCAAAATGGTGTGCTCAAGTCTCTCTCTTTCCTCTTTGAGTATATTGGTGAAATGGGAAAGGACTACATCTATGCTGTGACTCCTTTGCTTGAGGATGCTCTCATGGACAGGGATTTGGTTCATAGGCAGACAGCTGCATCTGCCGTGAAGCACATGGCACTGGGAGTGGCTGGTTTGGGTTGCGAGGATGCGCTGGTCCATTTGCTGAACTATGTCTGGCCAAACATATTTGAAACTTCTCCACATGTGATAAATGCTGTGATGGAAGCCATTGAAGGGATGAGGGTAGCCTTGGGTTCTGCTGTTGTTCTTAATTACTGTCTCCAAGGACTGTTCCACCCTGCCCGGAAAGTTAGGGAGGTGTACTGGAAGATATATAACTCTCTGTATATTGGAGCTCAGGATGCTCTTGTTGCAGCATACCCATCACTAGAGGATGAGCACAACAATGTTTACAGGAGTGTAAAATCCCTAATCAGCCTACCTTGCTTTAGGTCACACGCTAGCATACCTGCTGCAGTCCGCGAGACCAGAGGTTTAACAGAAGATCTTGTTCGTATATCTGTTGGTATTGAGGATGTGGATGATCTGATTGCTGATCTAGACAATGCACTTAGAACTGGGCCTCTCATACCTGCTGCAGTCCGCGAGACCAGAGGTTTAACAGAAGATCTTGTTCGTATATCTGTTGGTATTGAGGATGTGGATGATCTGATTGCTGATCTAGACAATGCATTAGAACTGGGCCTCTGTAATTTCATTCAAGTATCGACCTTTGAGCAATGGGATGAACTATATGCTTGTTTTAAATGA
Protein sequence

>Msa0344530

MASDDEIEKTQEERKKMEKQLASLTELTFDTDLYGDSDKASYFPSIPATDEEETHDSEVIPRRNLPSYTGHNVGHNVAVPINNSDDAGDNEFVTSRRIIDREDDYRRRRLNQILSPDRHDAFAAGEKTPDPSVRSYADIMRDEALKREREETIRLISKKKKKEEEEAGKVAPEKEKEKSQQNQQQKRRNRWDQNQNQEEDGVKKAKTSDWDAPDSNAMTPGIWDATPTPGRVIDATPGRRNRWDETPTPGRLVDSDATPGGVTPGGVTPGGATWDATPKLSGGITPTPKRQRSRWDETPATMGSATPLPGATPAAAYTPGVTPVGGVELATPTPGALQGSFTPEQYNLLRWERDIEERNRPLTDEELDAMFPQEGYKVLDPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRTDILPEFFRNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGSSDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTILPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGSAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDEHNNVYRSVKSLISLPCFRSHASIPAAVRETRGLTEDLVRISVGIEDVDDLIADLDNALRTGPLIPAAVRETRGLTEDLVRISVGIEDVDDLIADLDNALELGLCNFIQVSTFEQWDELYACFK*