Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197230 | XP_003628897.2 | 96.721 | 244 | 8 | 0 | 1 | 244 | 1 | 244 | 1.27e-173 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197230 | sp|Q8S8F9|NIC1_ARATH | 64.807 | 233 | 81 | 1 | 13 | 244 | 11 | 243 | 2.13e-116 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197230 | G7LIK7 | 96.721 | 244 | 8 | 0 | 1 | 244 | 1 | 244 | 6.09e-174 | 487 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042520 | Msa1197230 | -0.801949 | 7.074331e-49 | -8.615850e-47 |
| Msa0044700 | Msa1197230 | -0.811590 | 6.487341e-51 | -8.615850e-47 |
| Msa0050310 | Msa1197230 | -0.809398 | 1.930353e-50 | -8.615850e-47 |
| Msa0117650 | Msa1197230 | 0.805656 | 1.201397e-49 | -8.615850e-47 |
| Msa0603310 | Msa1197230 | 0.811875 | 5.624477e-51 | -8.615850e-47 |
| Msa0628200 | Msa1197230 | 0.813325 | 2.710790e-51 | -8.615850e-47 |
| Msa0637590 | Msa1197230 | 0.826418 | 2.742544e-54 | -8.615850e-47 |
| Msa0637700 | Msa1197230 | 0.811889 | 5.586980e-51 | -8.615850e-47 |
| Msa0644340 | Msa1197230 | 0.829992 | 3.773263e-55 | -8.615850e-47 |
| Msa0650550 | Msa1197230 | 0.814199 | 1.739575e-51 | -8.615850e-47 |
| Msa0669350 | Msa1197230 | 0.801527 | 8.632568e-49 | -8.615850e-47 |
| Msa0721260 | Msa1197230 | 0.803708 | 3.063755e-49 | -8.615850e-47 |
| Msa0829990 | Msa1197230 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
| Msa0831310 | Msa1197230 | 0.806632 | 7.486176e-50 | -8.615850e-47 |
| Msa0833980 | Msa1197230 | -0.819793 | 9.636523e-53 | -8.615850e-47 |
| Msa0161230 | Msa1197230 | 0.800123 | 1.670748e-48 | -8.615850e-47 |
| Msa0185040 | Msa1197230 | 0.824093 | 9.726036e-54 | -8.615850e-47 |
| Msa0186240 | Msa1197230 | 0.814928 | 1.199938e-51 | -8.615850e-47 |
| Msa0193950 | Msa1197230 | 0.822704 | 2.054682e-53 | -8.615850e-47 |
| Msa0369890 | Msa1197230 | 0.813218 | 2.860176e-51 | -8.615850e-47 |
| Msa0405200 | Msa1197230 | 0.853778 | 1.907734e-61 | -8.615850e-47 |
| Msa0410710 | Msa1197230 | -0.803396 | 3.556115e-49 | -8.615850e-47 |
| Msa0433090 | Msa1197230 | 0.822169 | 2.734352e-53 | -8.615850e-47 |
| Msa0434280 | Msa1197230 | -0.803743 | 3.014004e-49 | -8.615850e-47 |
| Msa0434300 | Msa1197230 | 0.808949 | 2.408782e-50 | -8.615850e-47 |
| Msa0444770 | Msa1197230 | -0.801565 | 8.480161e-49 | -8.615850e-47 |
| Msa0449500 | Msa1197230 | 0.848068 | 7.756434e-60 | -8.615850e-47 |
| Msa0464150 | Msa1197230 | 0.831762 | 1.389035e-55 | -8.615850e-47 |
| Msa0474290 | Msa1197230 | -0.804507 | 2.089454e-49 | -8.615850e-47 |
| Msa1001120 | Msa1197230 | 0.811591 | 6.485934e-51 | -8.615850e-47 |
| Msa1062060 | Msa1197230 | 0.827833 | 1.257562e-54 | -8.615850e-47 |
| Msa1074550 | Msa1197230 | 0.860053 | 2.700348e-63 | -8.615850e-47 |
| Msa1080130 | Msa1197230 | 0.841063 | 5.962583e-58 | -8.615850e-47 |
| Msa1080610 | Msa1197230 | -0.809158 | 2.172436e-50 | -8.615850e-47 |
| Msa1080680 | Msa1197230 | -0.811394 | 7.157358e-51 | -8.615850e-47 |
| Msa1085820 | Msa1197230 | 0.810250 | 1.265522e-50 | -8.615850e-47 |
| Msa0248320 | Msa1197230 | 0.800993 | 1.110298e-48 | -8.615850e-47 |
| Msa0267700 | Msa1197230 | 0.810488 | 1.124607e-50 | -8.615850e-47 |
| Msa0273400 | Msa1197230 | 0.818704 | 1.705678e-52 | -8.615850e-47 |
| Msa0313660 | Msa1197230 | 0.806795 | 6.914827e-50 | -8.615850e-47 |
| Msa0314240 | Msa1197230 | 0.825061 | 5.754303e-54 | -8.615850e-47 |
| Msa0324810 | Msa1197230 | 0.808786 | 2.610199e-50 | -8.615850e-47 |
| Msa0331580 | Msa1197230 | 0.834273 | 3.297421e-56 | -8.615850e-47 |
| Msa0345050 | Msa1197230 | 0.818854 | 1.577597e-52 | -8.615850e-47 |
| Msa1107220 | Msa1197230 | 0.836709 | 7.982021e-57 | -8.615850e-47 |
| Msa1107250 | Msa1197230 | 0.832772 | 7.809770e-56 | -8.615850e-47 |
| Msa1126320 | Msa1197230 | -0.819467 | 1.143893e-52 | -8.615850e-47 |
| Msa1150740 | Msa1197230 | 0.821571 | 3.761649e-53 | -8.615850e-47 |
| Msa1150760 | Msa1197230 | 0.836026 | 1.191105e-56 | -8.615850e-47 |
| Msa1162050 | Msa1197230 | 0.816442 | 5.519433e-52 | -8.615850e-47 |
| Msa1167150 | Msa1197230 | -0.809995 | 1.436527e-50 | -8.615850e-47 |
| Msa1167310 | Msa1197230 | 0.836146 | 1.110267e-56 | -8.615850e-47 |
| Msa1185270 | Msa1197230 | 0.810262 | 1.258269e-50 | -8.615850e-47 |
| Msa1197230 | Msa1200060 | -0.800452 | 1.432014e-48 | -8.615850e-47 |
| Msa1197230 | Msa1202110 | 0.827359 | 1.634524e-54 | -8.615850e-47 |
| Msa1197230 | Msa1202800 | 0.825455 | 4.645415e-54 | -8.615850e-47 |
| Msa1197230 | Msa1223710 | 0.806273 | 8.910556e-50 | -8.615850e-47 |
| Msa1197230 | Msa1239210 | 0.812072 | 5.094903e-51 | -8.615850e-47 |
| Msa1197230 | Msa1254870 | 0.828524 | 8.572421e-55 | -8.615850e-47 |
| Msa1197230 | Msa1255210 | 0.814286 | 1.664265e-51 | -8.615850e-47 |
| Msa1197230 | Msa1269200 | 0.831264 | 1.841950e-55 | -8.615850e-47 |
| Msa1197230 | Msa1292560 | 0.878217 | 3.357232e-69 | -8.615850e-47 |
| Msa1197230 | Msa1295650 | 0.807894 | 4.043867e-50 | -8.615850e-47 |
| Msa1197230 | Msa1303620 | -0.802827 | 4.663702e-49 | -8.615850e-47 |
| Msa1197230 | Msa1328430 | 0.828635 | 8.059334e-55 | -8.615850e-47 |
| Msa1197230 | Msa1398110 | 0.801802 | 7.583629e-49 | -8.615850e-47 |
| Msa1197230 | Msa1400800 | 0.831679 | 1.456294e-55 | -8.615850e-47 |
| Msa1197230 | Msa1437590 | 0.810973 | 8.831372e-51 | -8.615850e-47 |
| Msa1197230 | Msa1440990 | -0.804540 | 2.057088e-49 | -8.615850e-47 |
| Msa1197230 | Msa1450970 | 0.809575 | 1.768121e-50 | -8.615850e-47 |
| Msa0490320 | Msa1197230 | 0.820073 | 8.316565e-53 | -8.615850e-47 |
| Msa0497680 | Msa1197230 | 0.867346 | 1.464028e-65 | -8.615850e-47 |
| Msa0505640 | Msa1197230 | 0.801229 | 9.935761e-49 | -8.615850e-47 |
| Msa0509640 | Msa1197230 | 0.829978 | 3.802425e-55 | -8.615850e-47 |
| Msa0522140 | Msa1197230 | 0.818318 | 2.086781e-52 | -8.615850e-47 |
| Msa0522170 | Msa1197230 | 0.813966 | 1.958907e-51 | -8.615850e-47 |
| Msa0524710 | Msa1197230 | 0.809431 | 1.898414e-50 | -8.615850e-47 |
| Msa0531050 | Msa1197230 | 0.812405 | 4.309590e-51 | -8.615850e-47 |
| Msa0534610 | Msa1197230 | 0.808108 | 3.642171e-50 | -8.615850e-47 |
| Msa0548420 | Msa1197230 | 0.807741 | 4.358439e-50 | -8.615850e-47 |
| Msa0579520 | Msa1197230 | 0.809140 | 2.192151e-50 | -8.615850e-47 |
| Msa0583270 | Msa1197230 | -0.801086 | 1.062653e-48 | -8.615850e-47 |
| Msa0588040 | Msa1197230 | 0.831066 | 2.060449e-55 | -8.615850e-47 |
| Msa0590620 | Msa1197230 | -0.800613 | 1.327667e-48 | -8.615850e-47 |
| Msa0590810 | Msa1197230 | 0.813618 | 2.337088e-51 | -8.615850e-47 |
| Msa0597800 | Msa1197230 | 0.831068 | 2.058595e-55 | -8.615850e-47 |
| Msa0597820 | Msa1197230 | 0.827009 | 1.981884e-54 | -8.615850e-47 |
| Msa0873910 | Msa1197230 | 0.803539 | 3.321650e-49 | -8.615850e-47 |
| Msa0881880 | Msa1197230 | -0.811845 | 5.711094e-51 | -8.615850e-47 |
| Msa0901270 | Msa1197230 | 0.812509 | 4.089721e-51 | -8.615850e-47 |
| Msa0905570 | Msa1197230 | 0.815083 | 1.108476e-51 | -8.615850e-47 |
| Msa0925940 | Msa1197230 | 0.801322 | 9.510984e-49 | -8.615850e-47 |
| Msa0937160 | Msa1197230 | -0.819257 | 1.276891e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197230 | MtrunA17_Chr8g0367511 | 96.721 | 244 | 8 | 0 | 1 | 244 | 1 | 244 | 1.17e-177 | 487 |
| Msa1197230 | MtrunA17_Chr4g0049831 | 60.504 | 238 | 94 | 0 | 7 | 244 | 27 | 264 | 1.14e-114 | 329 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197230 | AT2G22570.1 | 64.807 | 233 | 81 | 1 | 13 | 244 | 11 | 243 | 2.17e-117 | 335 |
| Msa1197230 | AT2G22570.2 | 63.946 | 147 | 52 | 1 | 13 | 158 | 11 | 157 | 1.43e-69 | 211 |
Find 68 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCTCCTCATTGTCTTAT+TGG | 0.100923 | 8_1:-47464325 | Msa1197230:CDS |
| TTCTGTATTGATAATGTTAT+TGG | 0.121435 | 8_1:-47461269 | Msa1197230:three_prime_UTR |
| GTCCTCGTTGATCTTGTTAA+TGG | 0.182595 | 8_1:-47464638 | Msa1197230:CDS |
| CAAATCACGTAATTATTATA+AGG | 0.226279 | 8_1:+47464806 | None:intergenic |
| ATGACACCTTTGATGCTATC+TGG | 0.264551 | 8_1:+47461423 | None:intergenic |
| ATTCAGAGCCCATGTTGTTT+TGG | 0.286383 | 8_1:+47464750 | None:intergenic |
| CTTATAATAATTACGTGATT+TGG | 0.291854 | 8_1:-47464805 | Msa1197230:five_prime_UTR |
| GACTGCATTGATGGATTCAT+TGG | 0.318733 | 8_1:-47463350 | Msa1197230:CDS |
| CACCAGATCTTTGCTAGCTT+TGG | 0.323118 | 8_1:+47462519 | None:intergenic |
| TTGCTCCTGAGTGTTGCATT+TGG | 0.331157 | 8_1:+47463374 | None:intergenic |
| CTTATATACGAAAATTCTAT+AGG | 0.357175 | 8_1:+47461183 | None:intergenic |
| CTCTAATGTGTTTATTGATT+GGG | 0.358219 | 8_1:-47463309 | Msa1197230:CDS |
| GCTCTAATGTGTTTATTGAT+TGG | 0.369907 | 8_1:-47463310 | Msa1197230:CDS |
| TGAGGAGGATAAGGAGGTTC+AGG | 0.370110 | 8_1:+47464337 | None:intergenic |
| TCGCGGTTTCCTTTCTCCTC+TGG | 0.370388 | 8_1:-47462599 | Msa1197230:CDS |
| GTGTTGCGTTTAAAAGTCTT+TGG | 0.383188 | 8_1:-47461325 | Msa1197230:three_prime_UTR |
| TAAGGAGGTTCAGGAATATC+AGG | 0.390296 | 8_1:+47464346 | None:intergenic |
| TTATTGTTTAATAACATGTT+TGG | 0.402357 | 8_1:-47461347 | Msa1197230:three_prime_UTR |
| GAATCAAGATAAGCAAATAT+TGG | 0.405541 | 8_1:+47464376 | None:intergenic |
| GATGAAAGCAAATTAGTTCC+TGG | 0.413459 | 8_1:-47464298 | Msa1197230:intron |
| AGGAGCAAAGACTGCATTGA+TGG | 0.415455 | 8_1:-47463359 | Msa1197230:CDS |
| AAGAATAATTACGAAGTTGC+CGG | 0.420829 | 8_1:+47464598 | None:intergenic |
| TTATTGGAATGCGTTTATAC+TGG | 0.438197 | 8_1:-47461253 | Msa1197230:three_prime_UTR |
| GGTTTCTGCACCGTTGGATC+CGG | 0.450802 | 8_1:-47464617 | Msa1197230:CDS |
| AAATCACGTAATTATTATAA+GGG | 0.460495 | 8_1:+47464807 | None:intergenic |
| AGGAACTAATTTGCTTTCAT+CGG | 0.461633 | 8_1:+47464300 | None:intergenic |
| GTTAATGGTTTCTGCACCGT+TGG | 0.463955 | 8_1:-47464623 | Msa1197230:CDS |
| ATAAGACAATGAGGAGGATA+AGG | 0.464415 | 8_1:+47464328 | None:intergenic |
| TCTCGCAGACAAAACTGAAC+AGG | 0.475158 | 8_1:+47462624 | None:intergenic |
| CTATCAGATGACTTCAAAAC+CGG | 0.481486 | 8_1:-47464665 | Msa1197230:CDS |
| TACGAAGTTGCCGGATCCAA+CGG | 0.481544 | 8_1:+47464607 | None:intergenic |
| TGACACCTTTGATGCTATCT+GGG | 0.502158 | 8_1:+47461424 | None:intergenic |
| AGCCAAAGCTAGCAAAGATC+TGG | 0.505190 | 8_1:-47462521 | Msa1197230:CDS |
| CTAGCTTTGGCTACATGTAG+TGG | 0.506568 | 8_1:+47462532 | None:intergenic |
| CACTTTACATAGCCGTGGGA+AGG | 0.508305 | 8_1:-47461451 | Msa1197230:CDS |
| TCCTCTGGAAAATGTGATTG+TGG | 0.515877 | 8_1:-47462584 | Msa1197230:CDS |
| ATTGGTTCGTATGAGAAAGA+TGG | 0.517940 | 8_1:-47463332 | Msa1197230:CDS |
| TCTGAAATGAAGATCTCCTC+TGG | 0.528756 | 8_1:-47463409 | Msa1197230:intron |
| TGGTTTGGAGTTGACTGCTA+TGG | 0.529351 | 8_1:+47464770 | None:intergenic |
| CTTTACATAGCCGTGGGAAG+GGG | 0.535636 | 8_1:-47461449 | Msa1197230:CDS |
| TGGAATGCGTTTATACTGGT+TGG | 0.537139 | 8_1:-47461249 | Msa1197230:three_prime_UTR |
| ATGCACTGATATCTGCGTGC+TGG | 0.538194 | 8_1:-47462653 | Msa1197230:CDS |
| AAGTCATCTGATAGAAGAAG+AGG | 0.544683 | 8_1:+47464674 | None:intergenic |
| CGATGAGAAAATTAGTAAGA+TGG | 0.545937 | 8_1:-47464446 | Msa1197230:CDS |
| TGAGAAAATTAGTAAGATGG+TGG | 0.546145 | 8_1:-47464443 | Msa1197230:CDS |
| GATCATAAGTAGCACAAGCA+TGG | 0.546634 | 8_1:+47462557 | None:intergenic |
| CTCTGAATCTCAATCTCCGA+CGG | 0.551673 | 8_1:-47464735 | Msa1197230:CDS |
| TCCGACGGTGGAGCTTGTAA+AGG | 0.551838 | 8_1:-47464720 | Msa1197230:CDS |
| ACTTTACATAGCCGTGGGAA+GGG | 0.552368 | 8_1:-47461450 | Msa1197230:CDS |
| AGATCTGGTGTCACATCCAC+AGG | 0.561424 | 8_1:-47462506 | Msa1197230:intron |
| CATCTTGAGGCTAGTTAACA+CGG | 0.561753 | 8_1:+47461117 | None:intergenic |
| AAGCAGACATCGTTAAGTGT+TGG | 0.570890 | 8_1:-47461393 | Msa1197230:three_prime_UTR |
| TCCTTTACAAGCTCCACCGT+CGG | 0.571855 | 8_1:+47464719 | None:intergenic |
| TGAATCTCAATCTCCGACGG+TGG | 0.574215 | 8_1:-47464732 | Msa1197230:CDS |
| ATCATAAGTAGCACAAGCAT+GGG | 0.575362 | 8_1:+47462558 | None:intergenic |
| TGTTGCACTTTACATAGCCG+TGG | 0.579004 | 8_1:-47461456 | Msa1197230:CDS |
| GGGAGCCCAGATAGCATCAA+AGG | 0.586512 | 8_1:-47461429 | Msa1197230:CDS |
| AACTCCAAACCAAAACAACA+TGG | 0.595457 | 8_1:-47464759 | Msa1197230:exon |
| AAGATCAACGAGGACAAGAC+CGG | 0.605229 | 8_1:+47464646 | None:intergenic |
| GTTGCACTTTACATAGCCGT+GGG | 0.616215 | 8_1:-47461455 | Msa1197230:CDS |
| ATGATCCAAATGCAACACTC+AGG | 0.618760 | 8_1:-47463379 | Msa1197230:CDS |
| AGACAATGAGGAGGATAAGG+AGG | 0.632532 | 8_1:+47464331 | None:intergenic |
| ATAAGTAGCACAAGCATGGG+AGG | 0.633418 | 8_1:+47462561 | None:intergenic |
| TATCTGGGCTCCCCTTCCCA+CGG | 0.657861 | 8_1:+47461439 | None:intergenic |
| TCGGATCCAATAAGACAATG+AGG | 0.675598 | 8_1:+47464319 | None:intergenic |
| ACTCCAAACCAAAACAACAT+GGG | 0.686000 | 8_1:-47464758 | Msa1197230:exon |
| GATCCAATAAGACAATGAGG+AGG | 0.711794 | 8_1:+47464322 | None:intergenic |
| AACCATTAACAAGATCAACG+AGG | 0.806684 | 8_1:+47464636 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAAATTATATTT+AGG | + | chr8_1:47461461-47461480 | None:intergenic | 0.0% |
| !! | AAATCACGTAATTATTATAA+GGG | + | chr8_1:47461158-47461177 | None:intergenic | 15.0% |
| !!! | TTTTCTAAAATTTATGTTGA+AGG | - | chr8_1:47462293-47462312 | Msa1197230:intron | 15.0% |
| !! | GATAAACAAAATTAACATTT+GGG | + | chr8_1:47462353-47462372 | None:intergenic | 15.0% |
| !! | TGATAAACAAAATTAACATT+TGG | + | chr8_1:47462354-47462373 | None:intergenic | 15.0% |
| !! | AGCATTATTTCAATTATTAA+GGG | - | chr8_1:47462395-47462414 | Msa1197230:intron | 15.0% |
| !!! | ATTTTTACTAGTTTGAATTT+GGG | - | chr8_1:47462901-47462920 | Msa1197230:intron | 15.0% |
| !!! | TATTTGGTCAAATTAAATTT+TGG | - | chr8_1:47463479-47463498 | Msa1197230:intron | 15.0% |
| !! | TTCAAAAAAATAAAATCAAG+TGG | + | chr8_1:47463784-47463803 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGAAAAAACATTG+AGG | - | chr8_1:47463793-47463812 | Msa1197230:intron | 15.0% |
| !! | TTATTGTTTAATAACATGTT+TGG | - | chr8_1:47464615-47464634 | Msa1197230:CDS | 15.0% |
| !! | CAAATCACGTAATTATTATA+AGG | + | chr8_1:47461159-47461178 | None:intergenic | 20.0% |
| !! | CTTATAATAATTACGTGATT+TGG | - | chr8_1:47461157-47461176 | Msa1197230:three_prime_UTR | 20.0% |
| !!! | TATTTTGTTGTTATTGTGAT+AGG | - | chr8_1:47461480-47461499 | Msa1197230:intron | 20.0% |
| !!! | AAAAATTTGCTGAGAAAAAT+TGG | - | chr8_1:47461563-47461582 | Msa1197230:intron | 20.0% |
| !!! | TTGAATGTAACTATATGTTT+TGG | - | chr8_1:47461797-47461816 | Msa1197230:intron | 20.0% |
| !! | AATAATGCTCAAAAGTTATT+GGG | + | chr8_1:47462384-47462403 | None:intergenic | 20.0% |
| !! | AAATAATGCTCAAAAGTTAT+TGG | + | chr8_1:47462385-47462404 | None:intergenic | 20.0% |
| !! | GAGCATTATTTCAATTATTA+AGG | - | chr8_1:47462394-47462413 | Msa1197230:intron | 20.0% |
| !! | ATACAAAGATATATGCTTAT+TGG | - | chr8_1:47462488-47462507 | Msa1197230:intron | 20.0% |
| !! | TACAAAGATATATGCTTATT+GGG | - | chr8_1:47462489-47462508 | Msa1197230:intron | 20.0% |
| !! | GAATAAAATAATAACAACAC+AGG | + | chr8_1:47462712-47462731 | None:intergenic | 20.0% |
| !!! | TTTTAGTTGATTTTTGAAAC+TGG | - | chr8_1:47462817-47462836 | Msa1197230:intron | 20.0% |
| !!! | GATTTTTACTAGTTTGAATT+TGG | - | chr8_1:47462900-47462919 | Msa1197230:intron | 20.0% |
| !! | AGTGTAAATATTATTCATCA+TGG | + | chr8_1:47462978-47462997 | None:intergenic | 20.0% |
| !! | AAAAAACAACTAAAGTTGAA+AGG | + | chr8_1:47463636-47463655 | None:intergenic | 20.0% |
| !! | AATCTCATTATTTAGATGTT+TGG | - | chr8_1:47463731-47463750 | Msa1197230:intron | 20.0% |
| !! | AATGTAGATGCAAAAAAAAT+TGG | + | chr8_1:47464211-47464230 | None:intergenic | 20.0% |
| !!! | TTCTGTATTGATAATGTTAT+TGG | - | chr8_1:47464693-47464712 | Msa1197230:CDS | 20.0% |
| !! | CTTATATACGAAAATTCTAT+AGG | + | chr8_1:47464782-47464801 | None:intergenic | 20.0% |
| ! | GAATCAAGATAAGCAAATAT+TGG | + | chr8_1:47461589-47461608 | None:intergenic | 25.0% |
| ! | GATAGAAAAGAAATAATACC+AGG | + | chr8_1:47461685-47461704 | None:intergenic | 25.0% |
| ! | GTAATTATATATGTCAGTGT+CGG | + | chr8_1:47461930-47461949 | None:intergenic | 25.0% |
| ! | CTATTAGATATTCTCAATGA+AGG | + | chr8_1:47462139-47462158 | None:intergenic | 25.0% |
| ! | TCAAATATGGAAACTCTAAA+AGG | - | chr8_1:47462200-47462219 | Msa1197230:intron | 25.0% |
| !! | CAAATATGGAAACTCTAAAA+GGG | - | chr8_1:47462201-47462220 | Msa1197230:intron | 25.0% |
| ! | TTCACCAATAAAATGACTTT+AGG | + | chr8_1:47462321-47462340 | None:intergenic | 25.0% |
| !! | CTCTAATGTGTTTATTGATT+GGG | - | chr8_1:47462653-47462672 | Msa1197230:CDS | 25.0% |
| !! | ATTTTATTCTCTGTTATTGC+AGG | - | chr8_1:47462723-47462742 | Msa1197230:intron | 25.0% |
| ! | TAAACTTTCTTGCTTAATGA+TGG | + | chr8_1:47462761-47462780 | None:intergenic | 25.0% |
| ! | TGAAAACATTAATCTTCACA+TGG | + | chr8_1:47463005-47463024 | None:intergenic | 25.0% |
| !! | AATGTTTTCACTTTCCTATA+TGG | - | chr8_1:47463015-47463034 | Msa1197230:intron | 25.0% |
| ! | ATACAAAGTCTTTACCATAA+CGG | - | chr8_1:47463108-47463127 | Msa1197230:intron | 25.0% |
| ! | AATAAAGAATCTGTCAATTG+AGG | + | chr8_1:47463203-47463222 | None:intergenic | 25.0% |
| !! | TTGTTTAGTTCATAGATTCT+TGG | - | chr8_1:47463233-47463252 | Msa1197230:intron | 25.0% |
| !! | ATTATTTAGATGTTTGGTGA+TGG | - | chr8_1:47463737-47463756 | Msa1197230:intron | 25.0% |
| !! | ACCAAATTTTCAAAATCAGA+CGG | + | chr8_1:47463917-47463936 | None:intergenic | 25.0% |
| ! | ACAAATGTCTACTTTATATC+TGG | - | chr8_1:47464240-47464259 | Msa1197230:intron | 25.0% |
| AAGAATAATTACGAAGTTGC+CGG | + | chr8_1:47461367-47461386 | None:intergenic | 30.0% | |
| AGATAACAGAGTAAGTTAAG+AGG | + | chr8_1:47461411-47461430 | None:intergenic | 30.0% | |
| CATGACAATGAAAAAGACAA+AGG | + | chr8_1:47461436-47461455 | None:intergenic | 30.0% | |
| ! | ATTTTCTCATCGTGTTCTTT+TGG | + | chr8_1:47461508-47461527 | None:intergenic | 30.0% |
| CGATGAGAAAATTAGTAAGA+TGG | - | chr8_1:47461516-47461535 | Msa1197230:intron | 30.0% | |
| TGAGAAAATTAGTAAGATGG+TGG | - | chr8_1:47461519-47461538 | Msa1197230:intron | 30.0% | |
| !! | AGGAACTAATTTGCTTTCAT+CGG | + | chr8_1:47461665-47461684 | None:intergenic | 30.0% |
| !! | CATCCATTTTTATTAAGCCA+TGG | - | chr8_1:47462072-47462091 | Msa1197230:intron | 30.0% |
| ATAGTACCAACTTCCTAATA+AGG | - | chr8_1:47462155-47462174 | Msa1197230:intron | 30.0% | |
| ! | TTATAGGGTACTTCCTTATT+AGG | + | chr8_1:47462171-47462190 | None:intergenic | 30.0% |
| ATTTGATGAGGGGATTTATA+GGG | + | chr8_1:47462186-47462205 | None:intergenic | 30.0% | |
| TATTTGATGAGGGGATTTAT+AGG | + | chr8_1:47462187-47462206 | None:intergenic | 30.0% | |
| ATAAATCCCCTCATCAAATA+TGG | - | chr8_1:47462187-47462206 | Msa1197230:intron | 30.0% | |
| AGAGTTTCCATATTTGATGA+GGG | + | chr8_1:47462197-47462216 | None:intergenic | 30.0% | |
| TAGAGTTTCCATATTTGATG+AGG | + | chr8_1:47462198-47462217 | None:intergenic | 30.0% | |
| ! | ACATGTCACTTCTATTTGTT+TGG | + | chr8_1:47462243-47462262 | None:intergenic | 30.0% |
| TGACATGTAAACCAAACTTT+AGG | - | chr8_1:47462255-47462274 | Msa1197230:intron | 30.0% | |
| AACTTACTTCTCCTAAAGTT+TGG | + | chr8_1:47462269-47462288 | None:intergenic | 30.0% | |
| !! | GGTTCCTAAAGTCATTTTAT+TGG | - | chr8_1:47462314-47462333 | Msa1197230:intron | 30.0% |
| AAGATATATGCTTATTGGGT+TGG | - | chr8_1:47462493-47462512 | Msa1197230:intron | 30.0% | |
| CCAAAACCAAAACCAAATTA+GGG | + | chr8_1:47462528-47462547 | None:intergenic | 30.0% | |
| ACCAAAACCAAAACCAAATT+AGG | + | chr8_1:47462529-47462548 | None:intergenic | 30.0% | |
| GCTCTAATGTGTTTATTGAT+TGG | - | chr8_1:47462652-47462671 | Msa1197230:CDS | 30.0% | |
| !!! | TAGTTGATTTTTGAAACTGG+TGG | - | chr8_1:47462820-47462839 | Msa1197230:intron | 30.0% |
| TTAAACATAGTAGCTTACAG+TGG | + | chr8_1:47462863-47462882 | None:intergenic | 30.0% | |
| ACTGTAAGCTACTATGTTTA+AGG | - | chr8_1:47462862-47462881 | Msa1197230:intron | 30.0% | |
| ! | TAAGCTACTATGTTTAAGGT+AGG | - | chr8_1:47462866-47462885 | Msa1197230:intron | 30.0% |
| ! | AAGCTACTATGTTTAAGGTA+GGG | - | chr8_1:47462867-47462886 | Msa1197230:intron | 30.0% |
| ! | TACTAGTTTGAATTTGGGAT+AGG | - | chr8_1:47462906-47462925 | Msa1197230:intron | 30.0% |
| !! | TTTGAATTTGGGATAGGTTT+TGG | - | chr8_1:47462912-47462931 | Msa1197230:intron | 30.0% |
| TTAAGGAACTATGAATGAGA+AGG | - | chr8_1:47462936-47462955 | Msa1197230:intron | 30.0% | |
| ATTCCAACAATCATTAGTTG+AGG | + | chr8_1:47463043-47463062 | None:intergenic | 30.0% | |
| !! | TTTTCACTTGTTACAGGTTT+TGG | - | chr8_1:47463276-47463295 | Msa1197230:intron | 30.0% |
| ! | TTAATTTGACCAAATACCTG+TGG | + | chr8_1:47463475-47463494 | None:intergenic | 30.0% |
| ! | CATGTTCTGACTTTGTATTT+TGG | - | chr8_1:47463864-47463883 | Msa1197230:intron | 30.0% |
| TTGGATCTAACATACAAAGT+TGG | - | chr8_1:47463883-47463902 | Msa1197230:intron | 30.0% | |
| !! | ACCGTCTGATTTTGAAAATT+TGG | - | chr8_1:47463913-47463932 | Msa1197230:intron | 30.0% |
| AAAATTTGGTCCAATTGTCT+GGG | - | chr8_1:47463927-47463946 | Msa1197230:intron | 30.0% | |
| AAAATTGGCAGCAAAAAACA+AGG | + | chr8_1:47464196-47464215 | None:intergenic | 30.0% | |
| TTTCATCCATAGCAATAGAA+GGG | - | chr8_1:47464268-47464287 | Msa1197230:intron | 30.0% | |
| TAAAATCCCTTCTATTGCTA+TGG | + | chr8_1:47464277-47464296 | None:intergenic | 30.0% | |
| !! | CAATAGAAGGGATTTTAAGA+TGG | - | chr8_1:47464280-47464299 | Msa1197230:intron | 30.0% |
| !!! | ATTCTTGTGCTGATTTTACA+TGG | - | chr8_1:47464388-47464407 | Msa1197230:CDS | 30.0% |
| CTGCAGCAAAACAATAATAA+TGG | + | chr8_1:47464472-47464491 | None:intergenic | 30.0% | |
| !! | CATTATTATTGTTTTGCTGC+AGG | - | chr8_1:47464470-47464489 | Msa1197230:intron | 30.0% |
| TTATTGGAATGCGTTTATAC+TGG | - | chr8_1:47464709-47464728 | Msa1197230:CDS | 30.0% | |
| AACTCCAAACCAAAACAACA+TGG | - | chr8_1:47461203-47461222 | Msa1197230:three_prime_UTR | 35.0% | |
| ACTCCAAACCAAAACAACAT+GGG | - | chr8_1:47461204-47461223 | Msa1197230:three_prime_UTR | 35.0% | |
| !!! | GAAGAGGTTGTTGTTTTACT+GGG | + | chr8_1:47461275-47461294 | None:intergenic | 35.0% |
| !!! | AGAAGAGGTTGTTGTTTTAC+TGG | + | chr8_1:47461276-47461295 | None:intergenic | 35.0% |
| AAGTCATCTGATAGAAGAAG+AGG | + | chr8_1:47461291-47461310 | None:intergenic | 35.0% | |
| CTATCAGATGACTTCAAAAC+CGG | - | chr8_1:47461297-47461316 | Msa1197230:three_prime_UTR | 35.0% | |
| AACCATTAACAAGATCAACG+AGG | + | chr8_1:47461329-47461348 | None:intergenic | 35.0% | |
| ATAAGACAATGAGGAGGATA+AGG | + | chr8_1:47461637-47461656 | None:intergenic | 35.0% | |
| TATCCTCCTCATTGTCTTAT+TGG | - | chr8_1:47461637-47461656 | Msa1197230:intron | 35.0% | |
| GATGAAAGCAAATTAGTTCC+TGG | - | chr8_1:47461664-47461683 | Msa1197230:intron | 35.0% | |
| !!! | TGTCTGCTATGTCATTTTGT+GGG | + | chr8_1:47462098-47462117 | None:intergenic | 35.0% |
| !!! | TTGTCTGCTATGTCATTTTG+TGG | + | chr8_1:47462099-47462118 | None:intergenic | 35.0% |
| ACAAAATGACATAGCAGACA+AGG | - | chr8_1:47462098-47462117 | Msa1197230:intron | 35.0% | |
| CAAAATGACATAGCAGACAA+GGG | - | chr8_1:47462099-47462118 | Msa1197230:intron | 35.0% | |
| GTACTTCCTTATTAGGAAGT+TGG | + | chr8_1:47462164-47462183 | None:intergenic | 35.0% | |
| GAGTTTCCATATTTGATGAG+GGG | + | chr8_1:47462196-47462215 | None:intergenic | 35.0% | |
| ! | TGGTATTTTCTGCCCTAATT+TGG | - | chr8_1:47462513-47462532 | Msa1197230:CDS | 35.0% |
| !! | TTTCTGCCCTAATTTGGTTT+TGG | - | chr8_1:47462519-47462538 | Msa1197230:CDS | 35.0% |
| !!! | CCCTAATTTGGTTTTGGTTT+TGG | - | chr8_1:47462525-47462544 | Msa1197230:CDS | 35.0% |
| !! | ATTGGTTCGTATGAGAAAGA+TGG | - | chr8_1:47462630-47462649 | Msa1197230:CDS | 35.0% |
| !! | CTATGTTTAAGGTAGGGTTT+TGG | - | chr8_1:47462873-47462892 | Msa1197230:intron | 35.0% |
| !!! | TTGGGATAGGTTTTGGTTTA+AGG | - | chr8_1:47462919-47462938 | Msa1197230:intron | 35.0% |
| !! | GAGACCATAGTTCTAAATTG+TGG | - | chr8_1:47463066-47463085 | Msa1197230:intron | 35.0% |
| !!! | TTGTTACAGGTTTTGGTTTG+TGG | - | chr8_1:47463283-47463302 | Msa1197230:intron | 35.0% |
| !!! | TGTTACAGGTTTTGGTTTGT+GGG | - | chr8_1:47463284-47463303 | Msa1197230:intron | 35.0% |
| ATCATAAGTAGCACAAGCAT+GGG | + | chr8_1:47463407-47463426 | None:intergenic | 35.0% | |
| ATAACCAACCAACACAAGAT+GGG | + | chr8_1:47463601-47463620 | None:intergenic | 35.0% | |
| TATAACCAACCAACACAAGA+TGG | + | chr8_1:47463602-47463621 | None:intergenic | 35.0% | |
| TGTTGGATCACAAGATTGAA+CGG | - | chr8_1:47463839-47463858 | Msa1197230:intron | 35.0% | |
| ! | TTTTCAAAATCAGACGGTTC+AGG | + | chr8_1:47463911-47463930 | None:intergenic | 35.0% |
| GAAAATTTGGTCCAATTGTC+TGG | - | chr8_1:47463926-47463945 | Msa1197230:intron | 35.0% | |
| AAATTTGGTCCAATTGTCTG+GGG | - | chr8_1:47463928-47463947 | Msa1197230:intron | 35.0% | |
| ! | TCCAATCTCTCTGAGAAATT+GGG | + | chr8_1:47463974-47463993 | None:intergenic | 35.0% |
| ! | ATCCAATCTCTCTGAGAAAT+TGG | + | chr8_1:47463975-47463994 | None:intergenic | 35.0% |
| TGATATTGATATTGAGCCAG+AGG | - | chr8_1:47464045-47464064 | Msa1197230:intron | 35.0% | |
| AAAATCCTTCCTTAACTGCA+TGG | - | chr8_1:47464088-47464107 | Msa1197230:intron | 35.0% | |
| ATCACAGTTTCGAACTAAAG+AGG | + | chr8_1:47464168-47464187 | None:intergenic | 35.0% | |
| CTTTCATCCATAGCAATAGA+AGG | - | chr8_1:47464267-47464286 | Msa1197230:intron | 35.0% | |
| TCACAGATTCACAATTCACA+TGG | + | chr8_1:47464351-47464370 | None:intergenic | 35.0% | |
| GTGTTGCGTTTAAAAGTCTT+TGG | - | chr8_1:47464637-47464656 | Msa1197230:CDS | 35.0% | |
| !! | ATTCAGAGCCCATGTTGTTT+TGG | + | chr8_1:47461215-47461234 | None:intergenic | 40.0% |
| GTCCTCGTTGATCTTGTTAA+TGG | - | chr8_1:47461324-47461343 | Msa1197230:three_prime_UTR | 40.0% | |
| TAAGGAGGTTCAGGAATATC+AGG | + | chr8_1:47461619-47461638 | None:intergenic | 40.0% | |
| GATCCAATAAGACAATGAGG+AGG | + | chr8_1:47461643-47461662 | None:intergenic | 40.0% | |
| TCGGATCCAATAAGACAATG+AGG | + | chr8_1:47461646-47461665 | None:intergenic | 40.0% | |
| TATGAAGCACAGACACTACT+CGG | - | chr8_1:47461874-47461893 | Msa1197230:intron | 40.0% | |
| !! | ATATATGTCAGTGTCGGTGT+CGG | + | chr8_1:47461924-47461943 | None:intergenic | 40.0% |
| GGGCCATGGCTTAATAAAAA+TGG | + | chr8_1:47462078-47462097 | None:intergenic | 40.0% | |
| AGAGGAGATCTTCATTTCAG+AGG | + | chr8_1:47462554-47462573 | None:intergenic | 40.0% | |
| ! | TCTGAAATGAAGATCTCCTC+TGG | - | chr8_1:47462553-47462572 | Msa1197230:CDS | 40.0% |
| !! | TTGGATCATTTTCTAGCCAG+AGG | + | chr8_1:47462572-47462591 | None:intergenic | 40.0% |
| ATGATCCAAATGCAACACTC+AGG | - | chr8_1:47462583-47462602 | Msa1197230:CDS | 40.0% | |
| !! | GACTGCATTGATGGATTCAT+TGG | - | chr8_1:47462612-47462631 | Msa1197230:CDS | 40.0% |
| CATTAGTTGAGGAGCCATAT+AGG | + | chr8_1:47463032-47463051 | None:intergenic | 40.0% | |
| GCTCCTCAACTAATGATTGT+TGG | - | chr8_1:47463037-47463056 | Msa1197230:intron | 40.0% | |
| ! | CGGACCACAATTTAGAACTA+TGG | + | chr8_1:47463073-47463092 | None:intergenic | 40.0% |
| CTTTGTATTGCAGTCGCAAT+TGG | + | chr8_1:47463096-47463115 | None:intergenic | 40.0% | |
| CAAACTTGCAATTGCCGTTA+TGG | + | chr8_1:47463125-47463144 | None:intergenic | 40.0% | |
| GAATCTGTCAATTGAGGTTG+TGG | + | chr8_1:47463197-47463216 | None:intergenic | 40.0% | |
| GATTCTTGGTTGAGATTCTG+AGG | - | chr8_1:47463247-47463266 | Msa1197230:intron | 40.0% | |
| !!! | TGCTGGTTTTCACTTGTTAC+AGG | - | chr8_1:47463270-47463289 | Msa1197230:intron | 40.0% |
| ! | TCACATTTTCCAGAGGAGAA+AGG | + | chr8_1:47463375-47463394 | None:intergenic | 40.0% |
| ! | TCCTCTGGAAAATGTGATTG+TGG | - | chr8_1:47463378-47463397 | Msa1197230:CDS | 40.0% |
| GATCATAAGTAGCACAAGCA+TGG | + | chr8_1:47463408-47463427 | None:intergenic | 40.0% | |
| !! | GCTTTAAGACACACTGTAAC+TGG | - | chr8_1:47463689-47463708 | Msa1197230:intron | 40.0% |
| TGTGATCCAACATACCAGAT+TGG | + | chr8_1:47463831-47463850 | None:intergenic | 40.0% | |
| AATTTGGTCCAATTGTCTGG+GGG | - | chr8_1:47463929-47463948 | Msa1197230:intron | 40.0% | |
| TCCCAATTTCTCAGAGAGAT+TGG | - | chr8_1:47463970-47463989 | Msa1197230:intron | 40.0% | |
| CAATTCCATGCAGTTAAGGA+AGG | + | chr8_1:47464096-47464115 | None:intergenic | 40.0% | |
| GAGTCAATTCCATGCAGTTA+AGG | + | chr8_1:47464100-47464119 | None:intergenic | 40.0% | |
| ! | ACCGTATGATAACGAACACT+TGG | - | chr8_1:47464138-47464157 | Msa1197230:intron | 40.0% |
| GCCAAGTGTTCGTTATCATA+CGG | + | chr8_1:47464142-47464161 | None:intergenic | 40.0% | |
| TGACACCTTTGATGCTATCT+GGG | + | chr8_1:47464541-47464560 | None:intergenic | 40.0% | |
| ATGACACCTTTGATGCTATC+TGG | + | chr8_1:47464542-47464561 | None:intergenic | 40.0% | |
| AAGCAGACATCGTTAAGTGT+TGG | - | chr8_1:47464569-47464588 | Msa1197230:intron | 40.0% | |
| TGGAATGCGTTTATACTGGT+TGG | - | chr8_1:47464713-47464732 | Msa1197230:CDS | 40.0% | |
| ! | TGGTTTGGAGTTGACTGCTA+TGG | + | chr8_1:47461195-47461214 | None:intergenic | 45.0% |
| !!! | GAGCCCATGTTGTTTTGGTT+TGG | + | chr8_1:47461210-47461229 | None:intergenic | 45.0% |
| CTCTGAATCTCAATCTCCGA+CGG | - | chr8_1:47461227-47461246 | Msa1197230:three_prime_UTR | 45.0% | |
| AAGATCAACGAGGACAAGAC+CGG | + | chr8_1:47461319-47461338 | None:intergenic | 45.0% | |
| GTTAATGGTTTCTGCACCGT+TGG | - | chr8_1:47461339-47461358 | Msa1197230:three_prime_UTR | 45.0% | |
| AGACAATGAGGAGGATAAGG+AGG | + | chr8_1:47461634-47461653 | None:intergenic | 45.0% | |
| TTGAAGACGTGTTCACTGTC+CGG | + | chr8_1:47461846-47461865 | None:intergenic | 45.0% | |
| GTGTCTGTGCTTCATAGCTT+TGG | + | chr8_1:47461870-47461889 | None:intergenic | 45.0% | |
| ! | TACTCGGATTAGGTGTGTCT+TGG | - | chr8_1:47461890-47461909 | Msa1197230:intron | 45.0% |
| ! | GGATCTATGAAGCTCTGACA+CGG | + | chr8_1:47462001-47462020 | None:intergenic | 45.0% |
| TCAGAGCTTCATAGATCCGA+AGG | - | chr8_1:47462003-47462022 | Msa1197230:intron | 45.0% | |
| CAGAGCTTCATAGATCCGAA+GGG | - | chr8_1:47462004-47462023 | Msa1197230:intron | 45.0% | |
| !!! | CTATGTCATTTTGTGGGCCA+TGG | + | chr8_1:47462092-47462111 | None:intergenic | 45.0% |
| ! | TTGCTCCTGAGTGTTGCATT+TGG | + | chr8_1:47462591-47462610 | None:intergenic | 45.0% |
| AGGAGCAAAGACTGCATTGA+TGG | - | chr8_1:47462603-47462622 | Msa1197230:CDS | 45.0% | |
| TGTATTGCAGTCGCAATTGG+CGG | + | chr8_1:47463093-47463112 | None:intergenic | 45.0% | |
| ATATTGCAGACGCAGCAATG+CGG | + | chr8_1:47463151-47463170 | None:intergenic | 45.0% | |
| GTCAATTGAGGTTGTGGTCA+CGG | + | chr8_1:47463191-47463210 | None:intergenic | 45.0% | |
| TCTCGCAGACAAAACTGAAC+AGG | + | chr8_1:47463341-47463360 | None:intergenic | 45.0% | |
| ! | GTTTTGTCTGCGAGAAATCG+CGG | - | chr8_1:47463346-47463365 | Msa1197230:CDS | 45.0% |
| ! | GCCACAATCACATTTTCCAG+AGG | + | chr8_1:47463382-47463401 | None:intergenic | 45.0% |
| ATAAGTAGCACAAGCATGGG+AGG | + | chr8_1:47463404-47463423 | None:intergenic | 45.0% | |
| !! | CTAGCTTTGGCTACATGTAG+TGG | + | chr8_1:47463433-47463452 | None:intergenic | 45.0% |
| AGCCAAAGCTAGCAAAGATC+TGG | - | chr8_1:47463441-47463460 | Msa1197230:intron | 45.0% | |
| ! | CACCAGATCTTTGCTAGCTT+TGG | + | chr8_1:47463446-47463465 | None:intergenic | 45.0% |
| GTGTCACATCCACAGGTATT+TGG | - | chr8_1:47463463-47463482 | Msa1197230:intron | 45.0% | |
| CAACCAACACAAGATGGGAA+AGG | + | chr8_1:47463596-47463615 | None:intergenic | 45.0% | |
| ! | CTTTCCCATCTTGTGTTGGT+TGG | - | chr8_1:47463594-47463613 | Msa1197230:intron | 45.0% |
| GGTAATCACAGTCACCAATC+TGG | - | chr8_1:47463814-47463833 | Msa1197230:intron | 45.0% | |
| CAGTCACCAATCTGGTATGT+TGG | - | chr8_1:47463822-47463841 | Msa1197230:intron | 45.0% | |
| TGGGAATCATGCATTTGACG+TGG | + | chr8_1:47463955-47463974 | None:intergenic | 45.0% | |
| AGAGATTGGATCGTCTGTAG+CGG | - | chr8_1:47463984-47464003 | Msa1197230:intron | 45.0% | |
| TGTTGCACTTTACATAGCCG+TGG | - | chr8_1:47464506-47464525 | Msa1197230:intron | 45.0% | |
| GTTGCACTTTACATAGCCGT+GGG | - | chr8_1:47464507-47464526 | Msa1197230:intron | 45.0% | |
| ACTTTACATAGCCGTGGGAA+GGG | - | chr8_1:47464512-47464531 | Msa1197230:intron | 45.0% | |
| !! | ATAAATCAAATAATATTATA+TGG | - | chr8_1:47461713-47461732 | Msa1197230:intron | 5.0% |
| TGAATCTCAATCTCCGACGG+TGG | - | chr8_1:47461230-47461249 | Msa1197230:three_prime_UTR | 50.0% | |
| TCCTTTACAAGCTCCACCGT+CGG | + | chr8_1:47461246-47461265 | None:intergenic | 50.0% | |
| TACGAAGTTGCCGGATCCAA+CGG | + | chr8_1:47461358-47461377 | None:intergenic | 50.0% | |
| TGAGGAGGATAAGGAGGTTC+AGG | + | chr8_1:47461628-47461647 | None:intergenic | 50.0% | |
| ! | GTGTTACTATCAAACCCCGC+CGG | - | chr8_1:47461824-47461843 | Msa1197230:intron | 50.0% |
| GCACAGACACTACTCGGATT+AGG | - | chr8_1:47461880-47461899 | Msa1197230:intron | 50.0% | |
| GCTTCATAGATCCGAAGGGT+TGG | - | chr8_1:47462008-47462027 | Msa1197230:intron | 50.0% | |
| TGCTAGGTGCTAGTGCTTCA+TGG | - | chr8_1:47462031-47462050 | Msa1197230:intron | 50.0% | |
| !! | TGGTTGAGATTCTGAGGTGC+TGG | - | chr8_1:47463253-47463272 | Msa1197230:intron | 50.0% |
| ! | ATGCACTGATATCTGCGTGC+TGG | - | chr8_1:47463309-47463328 | Msa1197230:CDS | 50.0% |
| !! | AGATCTGGTGTCACATCCAC+AGG | - | chr8_1:47463456-47463475 | Msa1197230:intron | 50.0% |
| CTGCCTTTCCCATCTTGTGT+TGG | - | chr8_1:47463590-47463609 | Msa1197230:intron | 50.0% | |
| CACTTTACATAGCCGTGGGA+AGG | - | chr8_1:47464511-47464530 | Msa1197230:intron | 50.0% | |
| CTTTACATAGCCGTGGGAAG+GGG | - | chr8_1:47464513-47464532 | Msa1197230:intron | 50.0% | |
| TCCGACGGTGGAGCTTGTAA+AGG | - | chr8_1:47461242-47461261 | Msa1197230:three_prime_UTR | 55.0% | |
| GGTTTCTGCACCGTTGGATC+CGG | - | chr8_1:47461345-47461364 | Msa1197230:three_prime_UTR | 55.0% | |
| AAGACGTGTTCACTGTCCGG+CGG | + | chr8_1:47461843-47461862 | None:intergenic | 55.0% | |
| ! | TGAAGCTCTGACACGGACAC+TGG | + | chr8_1:47461994-47462013 | None:intergenic | 55.0% |
| !! | AGATCCGAAGGGTTGGTGCT+AGG | - | chr8_1:47462015-47462034 | Msa1197230:intron | 55.0% |
| AGCACCTAGCACCAACCCTT+CGG | + | chr8_1:47462022-47462041 | None:intergenic | 55.0% | |
| TCGCGGTTTCCTTTCTCCTC+TGG | - | chr8_1:47463363-47463382 | Msa1197230:CDS | 55.0% | |
| CGTCTGTAGCGGCTGCAAAA+CGG | - | chr8_1:47463995-47464014 | Msa1197230:intron | 55.0% | |
| TGTAGCGGCTGCAAAACGGT+TGG | - | chr8_1:47463999-47464018 | Msa1197230:intron | 55.0% | |
| CTTCCACTGCAAAGAGCCTC+TGG | + | chr8_1:47464064-47464083 | None:intergenic | 55.0% | |
| CAGAGGCTCTTTGCAGTGGA+AGG | - | chr8_1:47464062-47464081 | Msa1197230:intron | 55.0% | |
| GGGAGCCCAGATAGCATCAA+AGG | - | chr8_1:47464533-47464552 | Msa1197230:intron | 55.0% | |
| AGACGTGTTCACTGTCCGGC+GGG | + | chr8_1:47461842-47461861 | None:intergenic | 60.0% | |
| TGACGTGGCCCCCAGACAAT+TGG | + | chr8_1:47463940-47463959 | None:intergenic | 60.0% | |
| GAGCCAGAGGCTCTTTGCAG+TGG | - | chr8_1:47464058-47464077 | Msa1197230:intron | 60.0% | |
| TATCTGGGCTCCCCTTCCCA+CGG | + | chr8_1:47464526-47464545 | None:intergenic | 60.0% | |
| GACGTGTTCACTGTCCGGCG+GGG | + | chr8_1:47461841-47461860 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 47461125 | 47464859 | 47461125 | ID=Msa1197230;Name=Msa1197230 |
| chr8_1 | mRNA | 47461125 | 47464859 | 47461125 | ID=Msa1197230-mRNA-1;Parent=Msa1197230;Name=Msa1197230-mRNA-1;_AED=0.07;_eAED=0.07;_QI=97|1|1|1|1|1|5|290|244 |
| chr8_1 | exon | 47461125 | 47461492 | 47461125 | ID=Msa1197230-mRNA-1:exon:15016;Parent=Msa1197230-mRNA-1 |
| chr8_1 | exon | 47462507 | 47462692 | 47462507 | ID=Msa1197230-mRNA-1:exon:15015;Parent=Msa1197230-mRNA-1 |
| chr8_1 | exon | 47463286 | 47463419 | 47463286 | ID=Msa1197230-mRNA-1:exon:15014;Parent=Msa1197230-mRNA-1 |
| chr8_1 | exon | 47464299 | 47464482 | 47464299 | ID=Msa1197230-mRNA-1:exon:15013;Parent=Msa1197230-mRNA-1 |
| chr8_1 | exon | 47464610 | 47464859 | 47464610 | ID=Msa1197230-mRNA-1:exon:15012;Parent=Msa1197230-mRNA-1 |
| chr8_1 | five_prime_UTR | 47464763 | 47464859 | 47464763 | ID=Msa1197230-mRNA-1:five_prime_utr;Parent=Msa1197230-mRNA-1 |
| chr8_1 | CDS | 47464610 | 47464762 | 47464610 | ID=Msa1197230-mRNA-1:cds;Parent=Msa1197230-mRNA-1 |
| chr8_1 | CDS | 47464299 | 47464482 | 47464299 | ID=Msa1197230-mRNA-1:cds;Parent=Msa1197230-mRNA-1 |
| chr8_1 | CDS | 47463286 | 47463419 | 47463286 | ID=Msa1197230-mRNA-1:cds;Parent=Msa1197230-mRNA-1 |
| chr8_1 | CDS | 47462507 | 47462692 | 47462507 | ID=Msa1197230-mRNA-1:cds;Parent=Msa1197230-mRNA-1 |
| chr8_1 | CDS | 47461415 | 47461492 | 47461415 | ID=Msa1197230-mRNA-1:cds;Parent=Msa1197230-mRNA-1 |
| chr8_1 | three_prime_UTR | 47461125 | 47461414 | 47461125 | ID=Msa1197230-mRNA-1:three_prime_utr;Parent=Msa1197230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
