Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433910 | XP_013465165.1 | 92.281 | 285 | 3 | 1 | 2 | 267 | 3 | 287 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433910 | sp|Q9ZNT7|PHB2_ARATH | 75.524 | 286 | 50 | 2 | 1 | 266 | 1 | 286 | 9.82e-148 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433910 | A0A072VM16 | 92.281 | 285 | 3 | 1 | 2 | 267 | 3 | 287 | 0.0 | 516 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1433910 | Msa1465700 | 0.802370 | 5.794568e-49 | -8.615850e-47 |
| Msa0220950 | Msa1433910 | 0.962616 | 4.334763e-121 | -8.615850e-47 |
| Msa0979820 | Msa1433910 | 0.825959 | 3.526674e-54 | -8.615850e-47 |
| Msa0262400 | Msa1433910 | 0.802586 | 5.228468e-49 | -8.615850e-47 |
| Msa0337750 | Msa1433910 | 0.879132 | 1.598493e-69 | -8.615850e-47 |
| Msa1116940 | Msa1433910 | 0.810127 | 1.345153e-50 | -8.615850e-47 |
| Msa0877540 | Msa1433910 | 0.810712 | 1.005539e-50 | -8.615850e-47 |
| Msa0943180 | Msa1433910 | 0.867083 | 1.776839e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433910 | MtrunA17_Chr2g0325011 | 92.254 | 284 | 3 | 1 | 3 | 267 | 1 | 284 | 0.0 | 514 |
| Msa1433910 | MtrunA17_Chr4g0040101 | 78.521 | 284 | 42 | 1 | 3 | 267 | 1 | 284 | 1.13e-158 | 442 |
| Msa1433910 | MtrunA17_Chr8g0356051 | 49.802 | 253 | 105 | 3 | 25 | 255 | 20 | 272 | 7.88e-79 | 239 |
| Msa1433910 | MtrunA17_Chr3g0079011 | 47.500 | 280 | 120 | 5 | 10 | 266 | 3 | 278 | 4.41e-78 | 237 |
| Msa1433910 | MtrunA17_Chr5g0444361 | 29.282 | 181 | 94 | 4 | 3 | 163 | 12 | 178 | 9.66e-19 | 81.3 |
| Msa1433910 | MtrunA17_Chr6g0449171 | 33.333 | 144 | 58 | 1 | 77 | 220 | 2 | 107 | 1.57e-17 | 76.3 |
| Msa1433910 | MtrunA17_Chr5g0444371 | 27.215 | 158 | 75 | 3 | 25 | 163 | 18 | 154 | 1.07e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433910 | AT1G03860.1 | 75.524 | 286 | 50 | 2 | 1 | 266 | 1 | 286 | 9.99e-149 | 417 |
| Msa1433910 | AT1G03860.3 | 75.524 | 286 | 50 | 2 | 1 | 266 | 1 | 286 | 9.99e-149 | 417 |
| Msa1433910 | AT4G28510.1 | 80.000 | 285 | 38 | 1 | 2 | 267 | 3 | 287 | 1.69e-146 | 412 |
| Msa1433910 | AT2G20530.2 | 75.524 | 286 | 50 | 2 | 1 | 267 | 1 | 285 | 3.21e-146 | 411 |
| Msa1433910 | AT2G20530.1 | 75.524 | 286 | 50 | 2 | 1 | 267 | 1 | 285 | 3.21e-146 | 411 |
| Msa1433910 | AT5G44140.1 | 72.662 | 278 | 56 | 2 | 1 | 258 | 1 | 278 | 7.70e-141 | 397 |
| Msa1433910 | AT1G03860.2 | 79.638 | 221 | 26 | 1 | 65 | 266 | 1 | 221 | 1.25e-115 | 331 |
| Msa1433910 | AT3G27280.1 | 47.794 | 272 | 118 | 3 | 15 | 266 | 12 | 279 | 4.82e-79 | 240 |
| Msa1433910 | AT3G27280.2 | 47.794 | 272 | 118 | 3 | 15 | 266 | 12 | 279 | 4.82e-79 | 240 |
| Msa1433910 | AT5G40770.1 | 49.042 | 261 | 113 | 2 | 15 | 255 | 12 | 272 | 1.74e-78 | 239 |
| Msa1433910 | AT5G14300.1 | 46.256 | 227 | 108 | 5 | 33 | 255 | 22 | 238 | 9.44e-61 | 192 |
Find 103 sgRNAs with CRISPR-Local
Find 658 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGACGGCCTTGTTAATT+TGG | 0.098580 | tig0027435:+46712 | Msa1433910:three_prime_UTR |
| CACACTTTACAGGTGAAAAT+TGG | 0.119569 | tig0027435:+45095 | Msa1433910:intron |
| TGCATCAACACTGGCGAAAT+TGG | 0.141061 | tig0027435:+39919 | Msa1433910:CDS |
| AACCGTACGGTTCGGGAATT+GGG | 0.234943 | tig0027435:-39534 | None:intergenic |
| TCAGAAAGAAATGAGGTTAA+AGG | 0.238886 | tig0027435:-39604 | None:intergenic |
| CTGGCGAAATTGGGAATTAT+TGG | 0.260992 | tig0027435:+39929 | Msa1433910:CDS |
| AAACCGTACGGTTCGGGAAT+TGG | 0.269799 | tig0027435:-39535 | None:intergenic |
| TGCAACTTGGATCATTCGTT+TGG | 0.285467 | tig0027435:-46754 | None:intergenic |
| TTGGGAATTATTGGTGGAAT+TGG | 0.287106 | tig0027435:+39938 | Msa1433910:CDS |
| CATGACGGCCTTGTTAATTT+GGG | 0.289043 | tig0027435:+46713 | Msa1433910:three_prime_UTR |
| AAATCCAACGAACTTATTTC+AGG | 0.300261 | tig0027435:-46830 | None:intergenic |
| CAGAAAGAAATGAGGTTAAA+GGG | 0.355445 | tig0027435:-39603 | None:intergenic |
| ACAAGAAAACCGTACGGTTC+GGG | 0.362606 | tig0027435:-39541 | None:intergenic |
| GCAAAAGATCACCTGCTTCC+AGG | 0.365181 | tig0027435:-46529 | None:intergenic |
| GTCCTTACTCGTCCTTTGCC+TGG | 0.375759 | tig0027435:+45125 | Msa1433910:CDS |
| TTCTTGTGCAGCCACCTGCT+TGG | 0.376184 | tig0027435:-45762 | None:intergenic |
| ATCACAAAATGCGTTCCTTC+AGG | 0.381268 | tig0027435:-40154 | None:intergenic |
| CCCTCTCAGTCAGAATCTTC+CGG | 0.382058 | tig0027435:-45658 | None:intergenic |
| CTACCTCCAGTTATTGAATC+TGG | 0.394577 | tig0027435:+46786 | Msa1433910:three_prime_UTR |
| TCAGGCAGCAAAATTAAATC+AGG | 0.394657 | tig0027435:-46812 | None:intergenic |
| AAAGTTTCATGTATGATTGA+AGG | 0.395524 | tig0027435:-45203 | None:intergenic |
| TAAGTTGGCTGGCATTGTAC+TGG | 0.400052 | tig0027435:-45241 | None:intergenic |
| AGGATGCCAGATTCAATAAC+TGG | 0.402800 | tig0027435:-46792 | None:intergenic |
| GCCAGCTACCTACAGTTTAT+CGG | 0.406328 | tig0027435:+45147 | Msa1433910:CDS |
| AACAAGAAAACCGTACGGTT+CGG | 0.419480 | tig0027435:-39542 | None:intergenic |
| CAATGGCTTGTCCGATCAGT+TGG | 0.421036 | tig0027435:-46418 | None:intergenic |
| TGGAGAGAATTATAATGAAC+GGG | 0.425726 | tig0027435:+45175 | Msa1433910:CDS |
| GCAACTTGGATCATTCGTTT+GGG | 0.426029 | tig0027435:-46753 | None:intergenic |
| ACACTTTACAGGTGAAAATT+GGG | 0.431100 | tig0027435:+45096 | Msa1433910:intron |
| GCATCAACACTGGCGAAATT+GGG | 0.431369 | tig0027435:+39920 | Msa1433910:CDS |
| ATGACGGCCTTGTTAATTTG+GGG | 0.466313 | tig0027435:+46714 | Msa1433910:three_prime_UTR |
| TTCCTCAGTGTGATGAAAGC+TGG | 0.472587 | tig0027435:-46449 | None:intergenic |
| TTCATGAATTCTGACCTAGT+TGG | 0.477640 | tig0027435:+46674 | Msa1433910:three_prime_UTR |
| TCAATTACTAGTCTGACCTT+TGG | 0.487774 | tig0027435:+45713 | Msa1433910:CDS |
| TTCAGCAAACAAGGTTTACC+TGG | 0.493035 | tig0027435:+46511 | Msa1433910:CDS |
| TGCTGCAATTGAAGCCAAGC+AGG | 0.493081 | tig0027435:+45748 | Msa1433910:CDS |
| AACAGTCTTTACAATGTTGA+GGG | 0.493383 | tig0027435:+39977 | Msa1433910:CDS |
| GAATCTTCAGCGGATCAACT+TGG | 0.494004 | tig0027435:+46553 | Msa1433910:CDS |
| CTACTTCATCGCAATCTTCG+AGG | 0.494440 | tig0027435:+39633 | Msa1433910:five_prime_UTR |
| CCAAATTAACAAGGCCGTCA+TGG | 0.495219 | tig0027435:-46712 | None:intergenic |
| AAGTGCTGTAATTAGAGCAC+AGG | 0.500292 | tig0027435:+45832 | Msa1433910:CDS |
| GCGAAATTGGGAATTATTGG+TGG | 0.507313 | tig0027435:+39932 | Msa1433910:CDS |
| ATCAAGAGCAATGTTGAAGT+TGG | 0.509611 | tig0027435:-45684 | None:intergenic |
| CCTACGAAGATTCAGTCAAA+AGG | 0.509827 | tig0027435:+39484 | None:intergenic |
| TCCCCAATTCCCGAACCGTA+CGG | 0.511134 | tig0027435:+39532 | Msa1433910:five_prime_UTR |
| TGTGATGAAAGCTGGATTGT+TGG | 0.511259 | tig0027435:-46441 | None:intergenic |
| GCTGCCTGAAATAAGTTCGT+TGG | 0.513237 | tig0027435:+46826 | Msa1433910:three_prime_UTR |
| GTTGATGCAGCGCCACCACT+TGG | 0.517803 | tig0027435:-39905 | None:intergenic |
| CCTACAGTTTATCGGACCCT+TGG | 0.517966 | tig0027435:+45155 | Msa1433910:CDS |
| AGGCTGTTAGTCGTGAAATC+CGG | 0.519390 | tig0027435:+45639 | Msa1433910:intron |
| AATGGCTTGTCCGATCAGTT+GGG | 0.519729 | tig0027435:-46417 | None:intergenic |
| TAACAGTCTTTACAATGTTG+AGG | 0.522899 | tig0027435:+39976 | Msa1433910:CDS |
| GTTCATTATAATTCTCTCCA+AGG | 0.524825 | tig0027435:-45172 | None:intergenic |
| GGCCAGGCAAAGGACGAGTA+AGG | 0.525565 | tig0027435:-45127 | None:intergenic |
| ATCGTGTTTAACCGTCTCGT+TGG | 0.527718 | tig0027435:+40013 | Msa1433910:CDS |
| GTTGTGTAGGTTTATCCTGA+AGG | 0.531470 | tig0027435:+40139 | Msa1433910:intron |
| TGACGGCCTTGTTAATTTGG+GGG | 0.535142 | tig0027435:+46715 | Msa1433910:three_prime_UTR |
| TATTGCAAATTCAGCAAACA+AGG | 0.537639 | tig0027435:+46502 | Msa1433910:CDS |
| AACAAGGTTTACCTGGAAGC+AGG | 0.540987 | tig0027435:+46518 | Msa1433910:CDS |
| CCTCCCGCTGTGTAATAAGT+TGG | 0.543103 | tig0027435:-45256 | None:intergenic |
| TCCGATAAACTGTAGGTAGC+TGG | 0.544929 | tig0027435:-45148 | None:intergenic |
| TTGTGATTCCGTGGTTTGAG+AGG | 0.547203 | tig0027435:+40170 | Msa1433910:CDS |
| TTGGAGAGAATTATAATGAA+CGG | 0.549347 | tig0027435:+45174 | Msa1433910:CDS |
| CCGCTGTGTAATAAGTTGGC+TGG | 0.549719 | tig0027435:-45252 | None:intergenic |
| GTAGGTAGCTGGCCAGGCAA+AGG | 0.551902 | tig0027435:-45137 | None:intergenic |
| ATCACCGGCCTCTCAAACCA+CGG | 0.552231 | tig0027435:-40178 | None:intergenic |
| AAGTTGGCTGGCATTGTACT+GGG | 0.555741 | tig0027435:-45240 | None:intergenic |
| TTCATTATAATTCTCTCCAA+GGG | 0.556280 | tig0027435:-45171 | None:intergenic |
| TACTAGTCTGACCTTTGGCA+AGG | 0.569845 | tig0027435:+45718 | Msa1433910:CDS |
| GATTCCGTGGTTTGAGAGGC+CGG | 0.570682 | tig0027435:+40174 | Msa1433910:CDS |
| CAGCCAACTTATTACACAGC+GGG | 0.571868 | tig0027435:+45253 | Msa1433910:CDS |
| GGCTGCACAAGAAGCTGAGA+GGG | 0.572538 | tig0027435:+45772 | Msa1433910:CDS |
| TGGTGGCGCTGCATCAACAC+TGG | 0.572841 | tig0027435:+39910 | Msa1433910:CDS |
| GCTAAAAGTGCCCAACTGAT+CGG | 0.574265 | tig0027435:+46407 | Msa1433910:CDS |
| TAAACTGTAGGTAGCTGGCC+AGG | 0.578326 | tig0027435:-45143 | None:intergenic |
| GTTGTCTGTTCATTCCAACT+AGG | 0.578695 | tig0027435:-46688 | None:intergenic |
| TGAGAGGGCTAAATTTGTTG+TGG | 0.593905 | tig0027435:+45787 | Msa1433910:CDS |
| ACCGTACGGTTCGGGAATTG+GGG | 0.596022 | tig0027435:-39533 | None:intergenic |
| CCAAGGGTCCGATAAACTGT+AGG | 0.602094 | tig0027435:-45155 | None:intergenic |
| AACGCGAAAGTTCCAAGTGG+TGG | 0.602185 | tig0027435:+39893 | Msa1433910:CDS |
| TTCTGAACAAGAAAACCGTA+CGG | 0.603333 | tig0027435:-39547 | None:intergenic |
| GAGGAAGATAGAAGCCGCGA+GGG | 0.603991 | tig0027435:+46466 | Msa1433910:CDS |
| CCGGAAGATTCTGACTGAGA+GGG | 0.615174 | tig0027435:+45658 | Msa1433910:CDS |
| TCCGGAAGATTCTGACTGAG+AGG | 0.615920 | tig0027435:+45657 | Msa1433910:CDS |
| GTGTTTCTCAGAAAGAAATG+AGG | 0.617716 | tig0027435:-39611 | None:intergenic |
| TGTCTTTGACACCAACGAGA+CGG | 0.624230 | tig0027435:-40024 | None:intergenic |
| TGCAATTGAAGCCAAGCAGG+TGG | 0.632190 | tig0027435:+45751 | Msa1433910:CDS |
| GAAAGCTGGATTGTTGGCAA+TGG | 0.633552 | tig0027435:-46435 | None:intergenic |
| ACATGAAACTTTGAAAGCTG+TGG | 0.633777 | tig0027435:+45214 | Msa1433910:CDS |
| TGGCTGCACAAGAAGCTGAG+AGG | 0.639141 | tig0027435:+45771 | Msa1433910:CDS |
| GCACGAACATCATAGATCAC+CGG | 0.645792 | tig0027435:-40193 | None:intergenic |
| GACGGTTAAACACGATAGCA+CGG | 0.646783 | tig0027435:-40006 | None:intergenic |
| AGCAGTAAACTCCTTGCCAA+AGG | 0.656274 | tig0027435:-45729 | None:intergenic |
| AGTCTTTACAATGTTGAGGG+AGG | 0.662722 | tig0027435:+39980 | Msa1433910:CDS |
| ATGAACAGACAACTCCATGA+CGG | 0.673190 | tig0027435:+46698 | Msa1433910:three_prime_UTR |
| TCTCGTTGGTGTCAAAGACA+AGG | 0.674892 | tig0027435:+40027 | Msa1433910:CDS |
| CCAACTTATTACACAGCGGG+AGG | 0.682391 | tig0027435:+45256 | Msa1433910:CDS |
| ATGCCAGATTCAATAACTGG+AGG | 0.687656 | tig0027435:-46789 | None:intergenic |
| TGAGGAAGATAGAAGCCGCG+AGG | 0.696862 | tig0027435:+46465 | Msa1433910:CDS |
| AACATGTGCTATCTCCCTCG+CGG | 0.711001 | tig0027435:-46480 | None:intergenic |
| AAGAACGCGAAAGTTCCAAG+TGG | 0.742151 | tig0027435:+39890 | Msa1433910:CDS |
| ATCCAGCTTTCATCACACTG+AGG | 0.780168 | tig0027435:+46447 | Msa1433910:CDS |
| CCAGCCAACTTATTACACAG+CGG | 0.790079 | tig0027435:+45252 | Msa1433910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACATTTCTAAATTTAAA+GGG | - | tig0027435:41025-41044 | None:intergenic | 10.0% |
| !! | ATAAACATTTCTAAATTTAA+AGG | - | tig0027435:41026-41045 | None:intergenic | 10.0% |
| !!! | AGTTTTAATTAATAATTCAT+AGG | + | tig0027435:44957-44976 | Msa1433910:intron | 10.0% |
| !!! | AAAATGAAAATTGATTTCTA+AGG | - | tig0027435:39709-39728 | None:intergenic | 15.0% |
| !!! | TTTATTTTATCTTTAGCTAT+AGG | - | tig0027435:40361-40380 | None:intergenic | 15.0% |
| !! | ATATAAGCTATTTATAAAAC+TGG | - | tig0027435:40950-40969 | None:intergenic | 15.0% |
| !! | GAATATGATATATCAAAAAT+GGG | - | tig0027435:41136-41155 | None:intergenic | 15.0% |
| !! | TGAATATGATATATCAAAAA+TGG | - | tig0027435:41137-41156 | None:intergenic | 15.0% |
| !! | TTTGATATATCATATTCAAA+TGG | + | tig0027435:41139-41158 | Msa1433910:intron | 15.0% |
| !! | GTTAAATGTTTCTTATAAAT+AGG | - | tig0027435:41322-41341 | None:intergenic | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | tig0027435:43680-43699 | None:intergenic | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | tig0027435:43679-43698 | Msa1433910:intron | 15.0% |
| !!! | ATTATGTCTTCTAATATTTT+TGG | + | tig0027435:44920-44939 | Msa1433910:intron | 15.0% |
| !!! | TATGAAGATTTTTATGAGTA+GGG | - | tig0027435:39581-39600 | None:intergenic | 20.0% |
| !!! | TTATGAAGATTTTTATGAGT+AGG | - | tig0027435:39582-39601 | None:intergenic | 20.0% |
| !!! | TTCATTTTCGTTTTTGTTTA+GGG | + | tig0027435:39761-39780 | Msa1433910:intron | 20.0% |
| !!! | TTTTGTGAATTGAAATGATA+TGG | + | tig0027435:40105-40124 | Msa1433910:intron | 20.0% |
| !! | TTTGTGAATTGAAATGATAT+GGG | + | tig0027435:40106-40125 | Msa1433910:intron | 20.0% |
| !! | AAACATAATGAAACATATAG+AGG | - | tig0027435:40762-40781 | None:intergenic | 20.0% |
| !! | ATTCATGAAAATTATATCAC+TGG | - | tig0027435:40787-40806 | None:intergenic | 20.0% |
| !!! | AACTGTATTCAGATTTTAAA+AGG | + | tig0027435:40822-40841 | Msa1433910:intron | 20.0% |
| !!! | CGTTTTTACAAAGTTTATAT+TGG | + | tig0027435:40897-40916 | Msa1433910:intron | 20.0% |
| !! | GAGAAAAATCTAAATACTAA+CGG | - | tig0027435:41215-41234 | None:intergenic | 20.0% |
| !! | ATGTTTCTTATAAATAGGAA+AGG | - | tig0027435:41317-41336 | None:intergenic | 20.0% |
| !!! | GTCAACTTTTTCTTATAAAT+AGG | + | tig0027435:44605-44624 | Msa1433910:intron | 20.0% |
| !!! | TGATTTGAAATAGTTCTTAA+GGG | - | tig0027435:44687-44706 | None:intergenic | 20.0% |
| !! | AAATAATCTAACATAATGAC+AGG | - | tig0027435:45367-45386 | None:intergenic | 20.0% |
| !! | ATTTACACATAATACTTTCA+AGG | - | tig0027435:45441-45460 | None:intergenic | 20.0% |
| !! | ACATCCTACAATTTATTTAT+TGG | + | tig0027435:45504-45523 | Msa1433910:intron | 20.0% |
| !! | CAAACCAATAAATAAATTGT+AGG | - | tig0027435:45511-45530 | None:intergenic | 20.0% |
| !! | TTAATAGATCTATTCTTTGT+AGG | + | tig0027435:45619-45638 | Msa1433910:intron | 20.0% |
| !!! | ATTTTCATGTAGAATACATT+CGG | + | tig0027435:45924-45943 | Msa1433910:intron | 20.0% |
| !!! | TGGATTTTTATATTTTTCTC+AGG | + | tig0027435:46846-46865 | Msa1433910:three_prime_UTR | 20.0% |
| !!! | GGATTTTTATATTTTTCTCA+GGG | + | tig0027435:46847-46866 | Msa1433910:three_prime_UTR | 20.0% |
| !!! | TGCTAAAAGTTTTTGTTTAT+CGG | + | tig0027435:46905-46924 | Msa1433910:three_prime_UTR | 20.0% |
| ! | ATTGAAGAAAGAGAATATTG+AGG | - | tig0027435:39680-39699 | None:intergenic | 25.0% |
| !! | ATGAAAATTGATTTCTAAGG+TGG | - | tig0027435:39706-39725 | None:intergenic | 25.0% |
| !!! | GTTCATTTTCGTTTTTGTTT+AGG | + | tig0027435:39760-39779 | Msa1433910:intron | 25.0% |
| ! | CTTATGTATAAGTTTGCATA+AGG | + | tig0027435:40331-40350 | Msa1433910:intron | 25.0% |
| !! | TTATTTTCATAAGTTCTCCA+AGG | - | tig0027435:40428-40447 | None:intergenic | 25.0% |
| ! | TGAAAAAAGCTTATGCAAAA+TGG | + | tig0027435:40450-40469 | Msa1433910:intron | 25.0% |
| ! | TCTAAATAAAACTGGATTTC+AGG | - | tig0027435:40564-40583 | None:intergenic | 25.0% |
| !! | ATACATAATGATTTTCAGAC+AGG | - | tig0027435:40675-40694 | None:intergenic | 25.0% |
| ! | TATCATATTCAAATGGTGTA+AGG | + | tig0027435:41146-41165 | Msa1433910:intron | 25.0% |
| ! | TTCTTATAAATAGGAAAGGA+GGG | - | tig0027435:41313-41332 | None:intergenic | 25.0% |
| ! | TTTCTTATAAATAGGAAAGG+AGG | - | tig0027435:41314-41333 | None:intergenic | 25.0% |
| ! | CATTGCATAAATGATGTATT+TGG | + | tig0027435:41352-41371 | Msa1433910:intron | 25.0% |
| ! | ATGTAGTGAAAAATAAGCAA+GGG | + | tig0027435:41593-41612 | Msa1433910:intron | 25.0% |
| ! | AAGATATTGTGGATGTTAAA+AGG | + | tig0027435:41890-41909 | Msa1433910:intron | 25.0% |
| ! | ATAAACGCTAATTACGTTAA+AGG | - | tig0027435:41962-41981 | None:intergenic | 25.0% |
| !! | AACACCTTAAAGTAAAGTTT+TGG | + | tig0027435:42004-42023 | Msa1433910:intron | 25.0% |
| !! | ACACCTTAAAGTAAAGTTTT+GGG | + | tig0027435:42005-42024 | Msa1433910:intron | 25.0% |
| ! | TTAATTCAGGATATTCCATT+AGG | + | tig0027435:42042-42061 | Msa1433910:intron | 25.0% |
| !! | AGAAAAATCTTTTCTCCTAA+TGG | - | tig0027435:42060-42079 | None:intergenic | 25.0% |
| !! | TTAGGAGAAAAGATTTTTCT+AGG | + | tig0027435:42060-42079 | Msa1433910:intron | 25.0% |
| !! | TTCCATCTTAGATTTTTCAT+CGG | + | tig0027435:42176-42195 | Msa1433910:intron | 25.0% |
| ! | CTTATATTTATCCCAAGTTT+CGG | - | tig0027435:42709-42728 | None:intergenic | 25.0% |
| ! | TTCCACAACTTATTTAATGA+AGG | + | tig0027435:42954-42973 | Msa1433910:intron | 25.0% |
| ! | ATCCTTCATTAAATAAGTTG+TGG | - | tig0027435:42959-42978 | None:intergenic | 25.0% |
| ! | GTTCTTATAGATTGGAATTA+AGG | - | tig0027435:43234-43253 | None:intergenic | 25.0% |
| ! | AATTCCAATCTATAAGAACA+AGG | + | tig0027435:43235-43254 | Msa1433910:intron | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+GGG | + | tig0027435:43236-43255 | Msa1433910:intron | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | tig0027435:43672-43691 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | tig0027435:43673-43692 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | tig0027435:44281-44300 | Msa1433910:intron | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | - | tig0027435:44416-44435 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | tig0027435:44423-44442 | Msa1433910:intron | 25.0% |
| ! | GTTCTATCAAATACCATATT+TGG | - | tig0027435:44463-44482 | None:intergenic | 25.0% |
| ! | TGGTATTTGATAGAACATTA+TGG | + | tig0027435:44467-44486 | Msa1433910:intron | 25.0% |
| ! | TATTTGATAGAACATTATGG+CGG | + | tig0027435:44470-44489 | Msa1433910:intron | 25.0% |
| !! | CTTTTTCTTATAAATAGGAC+CGG | + | tig0027435:44610-44629 | Msa1433910:intron | 25.0% |
| !! | GATTTGAAATAGTTCTTAAG+GGG | - | tig0027435:44686-44705 | None:intergenic | 25.0% |
| !! | CTGATTTGAAATAGTTCTTA+AGG | - | tig0027435:44688-44707 | None:intergenic | 25.0% |
| ! | AATCTATAAACTTGAAGTAC+TGG | - | tig0027435:45016-45035 | None:intergenic | 25.0% |
| ! | TTCATTATAATTCTCTCCAA+GGG | - | tig0027435:45174-45193 | None:intergenic | 25.0% |
| ! | TTGGAGAGAATTATAATGAA+CGG | + | tig0027435:45174-45193 | Msa1433910:CDS | 25.0% |
| ! | AAAGTTTCATGTATGATTGA+AGG | - | tig0027435:45206-45225 | None:intergenic | 25.0% |
| ! | TTCATAAAACATATGCTACT+GGG | - | tig0027435:45475-45494 | None:intergenic | 25.0% |
| ! | TTTCATAAAACATATGCTAC+TGG | - | tig0027435:45476-45495 | None:intergenic | 25.0% |
| !! | TGGTTTGAATTCATTTTAAG+TGG | + | tig0027435:45524-45543 | Msa1433910:intron | 25.0% |
| !!! | GGTTTGAATTCATTTTAAGT+GGG | + | tig0027435:45525-45544 | Msa1433910:intron | 25.0% |
| !!! | TCTTTTGATTCCTTAAACAA+TGG | - | tig0027435:46128-46147 | None:intergenic | 25.0% |
| ! | TTTCTTAAACAATGACCTTA+GGG | + | tig0027435:46226-46245 | Msa1433910:intron | 25.0% |
| ! | TATTGATCAACATTGAATGT+TGG | + | tig0027435:46320-46339 | Msa1433910:intron | 25.0% |
| ! | AAGCTAGTGAGGATTTTATT+GGG | - | tig0027435:39510-39529 | None:intergenic | 30.0% |
| ! | AAAGCTAGTGAGGATTTTAT+TGG | - | tig0027435:39511-39530 | None:intergenic | 30.0% |
| CAGAAAGAAATGAGGTTAAA+GGG | - | tig0027435:39606-39625 | None:intergenic | 30.0% | |
| TCAGAAAGAAATGAGGTTAA+AGG | - | tig0027435:39607-39626 | None:intergenic | 30.0% | |
| GAAAGAGAATATTGAGGAAA+TGG | - | tig0027435:39674-39693 | None:intergenic | 30.0% | |
| TAACAGTCTTTACAATGTTG+AGG | + | tig0027435:39976-39995 | Msa1433910:CDS | 30.0% | |
| AACAGTCTTTACAATGTTGA+GGG | + | tig0027435:39977-39996 | Msa1433910:CDS | 30.0% | |
| !! | AAAGACAAGGTCATTTTCTA+GGG | + | tig0027435:40040-40059 | Msa1433910:intron | 30.0% |
| CTTGATTTCGTTGAATTCAT+CGG | + | tig0027435:40082-40101 | Msa1433910:intron | 30.0% | |
| ATAAGTTGTTCATCCAAACA+GGG | - | tig0027435:40274-40293 | None:intergenic | 30.0% | |
| AATAAGTTGTTCATCCAAAC+AGG | - | tig0027435:40275-40294 | None:intergenic | 30.0% | |
| CATGCAAGTCTAAATAAAAC+TGG | - | tig0027435:40572-40591 | None:intergenic | 30.0% | |
| ATACCATCACAAAGAATAGA+GGG | - | tig0027435:40651-40670 | None:intergenic | 30.0% | |
| TATACCATCACAAAGAATAG+AGG | - | tig0027435:40652-40671 | None:intergenic | 30.0% | |
| AGTATGAATGATGCACATAA+CGG | - | tig0027435:40702-40721 | None:intergenic | 30.0% | |
| ACATTACTTTGTTAACTAGG+GGG | - | tig0027435:40732-40751 | None:intergenic | 30.0% | |
| GACATTACTTTGTTAACTAG+GGG | - | tig0027435:40733-40752 | None:intergenic | 30.0% | |
| GGACATTACTTTGTTAACTA+GGG | - | tig0027435:40734-40753 | None:intergenic | 30.0% | |
| AGGACATTACTTTGTTAACT+AGG | - | tig0027435:40735-40754 | None:intergenic | 30.0% | |
| ATGAAACATATAGAGGATTG+AGG | - | tig0027435:40755-40774 | None:intergenic | 30.0% | |
| !!! | TTCCACATGAATTTGTTTTG+AGG | + | tig0027435:40856-40875 | Msa1433910:intron | 30.0% |
| ATTGGAGTTTACCTTTGTTA+AGG | + | tig0027435:40915-40934 | Msa1433910:intron | 30.0% | |
| AGCTATTTATAAAACTGGAG+AGG | - | tig0027435:40945-40964 | None:intergenic | 30.0% | |
| ! | TCAACAATGATTTTGCAATC+AGG | - | tig0027435:41065-41084 | None:intergenic | 30.0% |
| CATTCACACTATTTCGTATT+TGG | - | tig0027435:41492-41511 | None:intergenic | 30.0% | |
| GATGTAGTGAAAAATAAGCA+AGG | + | tig0027435:41592-41611 | Msa1433910:intron | 30.0% | |
| TTGGAATATAGGTACTCTTA+CGG | + | tig0027435:41684-41703 | Msa1433910:intron | 30.0% | |
| ATAGTTCAGGATTTAAGCTT+TGG | + | tig0027435:41806-41825 | Msa1433910:intron | 30.0% | |
| ATTGTGGATGTTAAAAGGAT+AGG | + | tig0027435:41895-41914 | Msa1433910:intron | 30.0% | |
| ATGTTAAAAGGATAGGAGAT+CGG | + | tig0027435:41902-41921 | Msa1433910:intron | 30.0% | |
| !! | GAGAAAAGATTTTTCTAGGA+GGG | + | tig0027435:42064-42083 | Msa1433910:intron | 30.0% |
| !! | AGAAAAGATTTTTCTAGGAG+GGG | + | tig0027435:42065-42084 | Msa1433910:intron | 30.0% |
| ! | CTATAGCAAATACGTGTTTT+AGG | + | tig0027435:42211-42230 | Msa1433910:intron | 30.0% |
| ! | AGATCGATTTCTTTCTCATT+AGG | + | tig0027435:42283-42302 | Msa1433910:intron | 30.0% |
| ATTTAAAGGGTGACAAACAA+AGG | + | tig0027435:42454-42473 | Msa1433910:intron | 30.0% | |
| ATTCCAACACAAGATATTAG+AGG | + | tig0027435:42479-42498 | Msa1433910:intron | 30.0% | |
| TTCCAACACAAGATATTAGA+GGG | + | tig0027435:42480-42499 | Msa1433910:intron | 30.0% | |
| !!! | AGAGAGATTGTTTTAGAGAT+TGG | + | tig0027435:42667-42686 | Msa1433910:intron | 30.0% |
| GGGATAAATATAAGATAGCT+AGG | + | tig0027435:42715-42734 | Msa1433910:intron | 30.0% | |
| ATATAAGATAGCTAGGAAAG+AGG | + | tig0027435:42722-42741 | Msa1433910:intron | 30.0% | |
| GAAGGATTATACCAATCTTT+AGG | + | tig0027435:42783-42802 | Msa1433910:intron | 30.0% | |
| AAGTGTATTAAGGATGAAGA+GGG | + | tig0027435:42882-42901 | Msa1433910:intron | 30.0% | |
| GACGATAATAGTTATAGTTC+CGG | - | tig0027435:43028-43047 | None:intergenic | 30.0% | |
| GGAACTATAACTATTATCGT+CGG | + | tig0027435:43027-43046 | Msa1433910:intron | 30.0% | |
| ! | AACTTTTCAACGAGATTATG+AGG | + | tig0027435:43174-43193 | Msa1433910:intron | 30.0% |
| TTCCAATCTATAAGAACAAG+GGG | + | tig0027435:43237-43256 | Msa1433910:intron | 30.0% | |
| !! | GCACTTAGTTTTCATTGATT+TGG | + | tig0027435:43466-43485 | Msa1433910:intron | 30.0% |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | tig0027435:43472-43491 | Msa1433910:intron | 30.0% |
| TATTGTTATGGGAAAATCTC+CGG | - | tig0027435:43630-43649 | None:intergenic | 30.0% | |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | + | tig0027435:43691-43710 | Msa1433910:intron | 30.0% |
| TGGAATGTAACTTCAGTAAA+AGG | + | tig0027435:43870-43889 | Msa1433910:intron | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | tig0027435:43942-43961 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | + | tig0027435:43945-43964 | Msa1433910:intron | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | tig0027435:44277-44296 | None:intergenic | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | tig0027435:44406-44425 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | tig0027435:44428-44447 | None:intergenic | 30.0% |
| CATTGAGTAACTAATGTACT+TGG | - | tig0027435:44575-44594 | None:intergenic | 30.0% | |
| TTCAGAGGCTAAACATAAAA+GGG | - | tig0027435:44828-44847 | None:intergenic | 30.0% | |
| ATTCAGAGGCTAAACATAAA+AGG | - | tig0027435:44829-44848 | None:intergenic | 30.0% | |
| !! | AAACTTGAAGTACTGGAAAT+TGG | - | tig0027435:45009-45028 | None:intergenic | 30.0% |
| ACACTTTACAGGTGAAAATT+GGG | + | tig0027435:45096-45115 | Msa1433910:intron | 30.0% | |
| GTTCATTATAATTCTCTCCA+AGG | - | tig0027435:45175-45194 | None:intergenic | 30.0% | |
| TGGAGAGAATTATAATGAAC+GGG | + | tig0027435:45175-45194 | Msa1433910:CDS | 30.0% | |
| !! | ATTTTTCAAACCATGTTGCT+TGG | + | tig0027435:45319-45338 | Msa1433910:intron | 30.0% |
| !! | TTTTTCAAACCATGTTGCTT+GGG | + | tig0027435:45320-45339 | Msa1433910:intron | 30.0% |
| AGTAACTGCATAAGAATTCA+CGG | - | tig0027435:45868-45887 | None:intergenic | 30.0% | |
| AAACAACAAAAACATGTACC+AGG | - | tig0027435:45900-45919 | None:intergenic | 30.0% | |
| AAATCTGGTTGTGTTTAATG+TGG | + | tig0027435:46065-46084 | Msa1433910:intron | 30.0% | |
| AATCTGGTTGTGTTTAATGT+GGG | + | tig0027435:46066-46085 | Msa1433910:intron | 30.0% | |
| GTCATTGTTTAAGAAACTCA+AGG | - | tig0027435:46222-46241 | None:intergenic | 30.0% | |
| GTTTCTTAAACAATGACCTT+AGG | + | tig0027435:46225-46244 | Msa1433910:intron | 30.0% | |
| AATTGACTGAGATGTAAAAC+TGG | - | tig0027435:46301-46320 | None:intergenic | 30.0% | |
| TTGATGTGTAAAAAAGGTCA+GGG | - | tig0027435:46378-46397 | None:intergenic | 30.0% | |
| !!! | ACCTTTTTTACACATCAACA+GGG | + | tig0027435:46380-46399 | Msa1433910:intron | 30.0% |
| TATTGCAAATTCAGCAAACA+AGG | + | tig0027435:46502-46521 | Msa1433910:CDS | 30.0% | |
| ! | GTAGTTCATTTTATGCAACT+TGG | - | tig0027435:46770-46789 | None:intergenic | 30.0% |
| AAATCCAACGAACTTATTTC+AGG | - | tig0027435:46833-46852 | None:intergenic | 30.0% | |
| TTCTGAACAAGAAAACCGTA+CGG | - | tig0027435:39550-39569 | None:intergenic | 35.0% | |
| GTGTTTCTCAGAAAGAAATG+AGG | - | tig0027435:39614-39633 | None:intergenic | 35.0% | |
| AGAATATTGAGGAAATGGAG+AGG | - | tig0027435:39669-39688 | None:intergenic | 35.0% | |
| TTGGGAATTATTGGTGGAAT+TGG | + | tig0027435:39938-39957 | Msa1433910:CDS | 35.0% | |
| !! | CAAAGACAAGGTCATTTTCT+AGG | + | tig0027435:40039-40058 | Msa1433910:intron | 35.0% |
| !!! | AAGGTCATTTTCTAGGGTTT+AGG | + | tig0027435:40046-40065 | Msa1433910:intron | 35.0% |
| !!! | AGGTCATTTTCTAGGGTTTA+GGG | + | tig0027435:40047-40066 | Msa1433910:intron | 35.0% |
| !! | ATTTGGTTGAGAGTACTTCT+GGG | + | tig0027435:40224-40243 | Msa1433910:intron | 35.0% |
| TTGAGCTAATCTCTTGACAT+AGG | - | tig0027435:40518-40537 | None:intergenic | 35.0% | |
| TAGACTTGCATGTCATCATT+AGG | + | tig0027435:40580-40599 | Msa1433910:intron | 35.0% | |
| TTTCCCTCTATTCTTTGTGA+TGG | + | tig0027435:40645-40664 | Msa1433910:intron | 35.0% | |
| GTTATGTGCATCATTCATAC+TGG | + | tig0027435:40701-40720 | Msa1433910:intron | 35.0% | |
| CATTACTTTGTTAACTAGGG+GGG | - | tig0027435:40731-40750 | None:intergenic | 35.0% | |
| CTCCTCAAAACAAATTCATG+TGG | - | tig0027435:40861-40880 | None:intergenic | 35.0% | |
| ! | GAAGTATTTGAACAACTGCT+AGG | + | tig0027435:41083-41102 | Msa1433910:intron | 35.0% |
| ACATTTCAATCTTGTGATCC+TGG | + | tig0027435:41246-41265 | Msa1433910:intron | 35.0% | |
| TATAGTTAAGTCCAAATGCC+AGG | - | tig0027435:41267-41286 | None:intergenic | 35.0% | |
| AGGGAGTAGACAATAATCAT+CGG | - | tig0027435:41294-41313 | None:intergenic | 35.0% | |
| ! | GATTCGACAAAGTTTTACGT+TGG | - | tig0027435:41456-41475 | None:intergenic | 35.0% |
| TTTGTCGAATCTCTATGACA+TGG | + | tig0027435:41465-41484 | Msa1433910:intron | 35.0% | |
| TACGAAATAGTGTGAATGCT+AGG | + | tig0027435:41494-41513 | Msa1433910:intron | 35.0% | |
| ! | TATTTTTCACTACATCCAGG+CGG | - | tig0027435:41588-41607 | None:intergenic | 35.0% |
| !! | GCTTATTTTTCACTACATCC+AGG | - | tig0027435:41591-41610 | None:intergenic | 35.0% |
| !!! | CGTTTTGGAACTTGGAATAT+AGG | + | tig0027435:41673-41692 | Msa1433910:intron | 35.0% |
| TGGAATATAGGTACTCTTAC+GGG | + | tig0027435:41685-41704 | Msa1433910:intron | 35.0% | |
| TACTCTTACGGGTAAATCTA+TGG | + | tig0027435:41696-41715 | Msa1433910:intron | 35.0% | |
| AAGTAGTAGACACTATGACT+AGG | + | tig0027435:41719-41738 | Msa1433910:intron | 35.0% | |
| ! | AGGATTTAAGCTTTGGTACA+CGG | + | tig0027435:41813-41832 | Msa1433910:intron | 35.0% |
| GCGAAGTTAGATCAAGAAAT+GGG | + | tig0027435:41836-41855 | Msa1433910:intron | 35.0% | |
| CGAAGTTAGATCAAGAAATG+GGG | + | tig0027435:41837-41856 | Msa1433910:intron | 35.0% | |
| ! | TATAGCCTTAAAGTGTGTAG+TGG | + | tig0027435:41927-41946 | Msa1433910:intron | 35.0% |
| TTGTTCCACTACACACTTTA+AGG | - | tig0027435:41935-41954 | None:intergenic | 35.0% | |
| CCTCCCAAAACTTTACTTTA+AGG | - | tig0027435:42011-42030 | None:intergenic | 35.0% | |
| !!! | CCTTAAAGTAAAGTTTTGGG+AGG | + | tig0027435:42008-42027 | Msa1433910:intron | 35.0% |
| ! | GGAGAAAAGATTTTTCTAGG+AGG | + | tig0027435:42063-42082 | Msa1433910:intron | 35.0% |
| AGCCGATGAAAAATCTAAGA+TGG | - | tig0027435:42181-42200 | None:intergenic | 35.0% | |
| !!! | TACGTGTTTTAGGAAAAGAG+AGG | + | tig0027435:42221-42240 | Msa1433910:intron | 35.0% |
| ATCTCATCACTTACAAGAGT+GGG | + | tig0027435:42247-42266 | Msa1433910:intron | 35.0% | |
| TTCTCATTAGGAAAACAGAC+AGG | + | tig0027435:42295-42314 | Msa1433910:intron | 35.0% | |
| TTAGACTGTAAAGTCATACC+TGG | + | tig0027435:42327-42346 | Msa1433910:intron | 35.0% | |
| AACTACCCAACATAGAGTAA+TGG | + | tig0027435:42359-42378 | Msa1433910:intron | 35.0% | |
| CATCACCATTACTCTATGTT+GGG | - | tig0027435:42367-42386 | None:intergenic | 35.0% | |
| !! | AGTAATGGTGATGGATGTAA+GGG | + | tig0027435:42374-42393 | Msa1433910:intron | 35.0% |
| AATCAAGTGGTGGCATTTAA+AGG | + | tig0027435:42440-42459 | Msa1433910:intron | 35.0% | |
| ATCAAGTGGTGGCATTTAAA+GGG | + | tig0027435:42441-42460 | Msa1433910:intron | 35.0% | |
| ACAGTGTTCAGAGTAAAGTT+CGG | + | tig0027435:42640-42659 | Msa1433910:intron | 35.0% | |
| AGTGTAAAAATGCCGAAACT+TGG | + | tig0027435:42694-42713 | Msa1433910:intron | 35.0% | |
| GTGTAAAAATGCCGAAACTT+GGG | + | tig0027435:42695-42714 | Msa1433910:intron | 35.0% | |
| ATACCAATCTTTAGGTACCA+AGG | + | tig0027435:42791-42810 | Msa1433910:intron | 35.0% | |
| ATCTATATACAAGCTTGCGA+AGG | + | tig0027435:42824-42843 | Msa1433910:intron | 35.0% | |
| TCTATATACAAGCTTGCGAA+GGG | + | tig0027435:42825-42844 | Msa1433910:intron | 35.0% | |
| CATCCTTAATACACTTCACT+TGG | - | tig0027435:42878-42897 | None:intergenic | 35.0% | |
| GAAGTGTATTAAGGATGAAG+AGG | + | tig0027435:42881-42900 | Msa1433910:intron | 35.0% | |
| AGAGAGATATTAAGGATCGA+TGG | + | tig0027435:42922-42941 | Msa1433910:intron | 35.0% | |
| TAACTATTATCGTCGGATTC+AGG | + | tig0027435:43034-43053 | Msa1433910:intron | 35.0% | |
| TCCAATCTATAAGAACAAGG+GGG | + | tig0027435:43238-43257 | Msa1433910:intron | 35.0% | |
| TACAAGATTGCGCGAATTAT+AGG | + | tig0027435:43264-43283 | Msa1433910:intron | 35.0% | |
| ACAAGATTGCGCGAATTATA+GGG | + | tig0027435:43265-43284 | Msa1433910:intron | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | + | tig0027435:43300-43319 | Msa1433910:intron | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | + | tig0027435:43301-43320 | Msa1433910:intron | 35.0% | |
| AAGAAAAGAGACTCACGTTA+CGG | + | tig0027435:43346-43365 | Msa1433910:intron | 35.0% | |
| !!! | AACCAATTTGGTTTTATGCC+TGG | + | tig0027435:43371-43390 | Msa1433910:intron | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+GGG | + | tig0027435:43372-43391 | Msa1433910:intron | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | tig0027435:43561-43580 | None:intergenic | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | + | tig0027435:43629-43648 | Msa1433910:intron | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | tig0027435:43737-43756 | None:intergenic | 35.0% |
| TAGAAACAAGACGGAGTATA+TGG | + | tig0027435:43850-43869 | Msa1433910:intron | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | + | tig0027435:43878-43897 | Msa1433910:intron | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | + | tig0027435:43879-43898 | Msa1433910:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | tig0027435:43930-43949 | Msa1433910:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | tig0027435:43941-43960 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | tig0027435:43943-43962 | None:intergenic | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | + | tig0027435:43944-43963 | Msa1433910:intron | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | tig0027435:43972-43991 | None:intergenic | 35.0% |
| TACATCATCGTATTCAAGCT+GGG | + | tig0027435:44005-44024 | Msa1433910:intron | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | - | tig0027435:44079-44098 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | tig0027435:44083-44102 | Msa1433910:intron | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | + | tig0027435:44218-44237 | Msa1433910:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | tig0027435:44270-44289 | Msa1433910:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | tig0027435:44290-44309 | Msa1433910:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | tig0027435:44295-44314 | Msa1433910:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | tig0027435:44347-44366 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | tig0027435:44348-44367 | Msa1433910:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | tig0027435:44351-44370 | Msa1433910:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | tig0027435:44435-44454 | Msa1433910:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | tig0027435:44447-44466 | Msa1433910:intron | 35.0% |
| TTTCTTATAAATAGGACCGG+AGG | + | tig0027435:44613-44632 | Msa1433910:intron | 35.0% | |
| TTCTTATAAATAGGACCGGA+GGG | + | tig0027435:44614-44633 | Msa1433910:intron | 35.0% | |
| CAACAATTAAATACTCCCTC+CGG | - | tig0027435:44632-44651 | None:intergenic | 35.0% | |
| TTAAATCACCACACAGACAA+CGG | - | tig0027435:44739-44758 | None:intergenic | 35.0% | |
| GTCTGTGTGGTGATTTAAAA+TGG | + | tig0027435:44741-44760 | Msa1433910:intron | 35.0% | |
| ! | TTTTGATGCCGTTAAACATC+TGG | + | tig0027435:44778-44797 | Msa1433910:intron | 35.0% |
| AAAGGGAAATTCAGACTACA+AGG | - | tig0027435:44811-44830 | None:intergenic | 35.0% | |
| AGAGTATGATGCAAATTCAG+AGG | - | tig0027435:44843-44862 | None:intergenic | 35.0% | |
| TCATAGGTAGCAAAGATGTT+TGG | + | tig0027435:44973-44992 | Msa1433910:intron | 35.0% | |
| CACACTTTACAGGTGAAAAT+TGG | + | tig0027435:45095-45114 | Msa1433910:intron | 35.0% | |
| ! | ACATGAAACTTTGAAAGCTG+TGG | + | tig0027435:45214-45233 | Msa1433910:CDS | 35.0% |
| ATCAAGAGCAATGTTGAAGT+TGG | - | tig0027435:45687-45706 | None:intergenic | 35.0% | |
| ! | TCAATTACTAGTCTGACCTT+TGG | + | tig0027435:45713-45732 | Msa1433910:CDS | 35.0% |
| !!! | ATAAGACAGTGCTAGTTTTG+GGG | - | tig0027435:45978-45997 | None:intergenic | 35.0% |
| !!! | GATAAGACAGTGCTAGTTTT+GGG | - | tig0027435:45979-45998 | None:intergenic | 35.0% |
| !! | AGATAAGACAGTGCTAGTTT+TGG | - | tig0027435:45980-45999 | None:intergenic | 35.0% |
| TGTTCTCTTGATCATGATGT+TGG | + | tig0027435:46003-46022 | Msa1433910:intron | 35.0% | |
| CATGATGTTGGATACATCTT+TGG | + | tig0027435:46015-46034 | Msa1433910:intron | 35.0% | |
| ACTGTCTTTGTTCACAAATC+TGG | + | tig0027435:46050-46069 | Msa1433910:intron | 35.0% | |
| AAATACTAACAAGTGCCCTT+AGG | + | tig0027435:46102-46121 | Msa1433910:intron | 35.0% | |
| TTCCTTAAACAATGGCCTAA+GGG | - | tig0027435:46120-46139 | None:intergenic | 35.0% | |
| ATTCCTTAAACAATGGCCTA+AGG | - | tig0027435:46121-46140 | None:intergenic | 35.0% | |
| AACTCAAGGAAACTTTGTCT+AGG | - | tig0027435:46208-46227 | None:intergenic | 35.0% | |
| TGATGTGTAAAAAAGGTCAG+GGG | - | tig0027435:46377-46396 | None:intergenic | 35.0% | |
| GTTGATGTGTAAAAAAGGTC+AGG | - | tig0027435:46379-46398 | None:intergenic | 35.0% | |
| !!! | GACCTTTTTTACACATCAAC+AGG | + | tig0027435:46379-46398 | Msa1433910:intron | 35.0% |
| ACCCTGTTGATGTGTAAAAA+AGG | - | tig0027435:46384-46403 | None:intergenic | 35.0% | |
| ! | ATCTTTTGCTGAATCTTCAG+CGG | + | tig0027435:46543-46562 | Msa1433910:CDS | 35.0% |
| !!! | TAACCAGCTCATTTTTTGCT+AGG | - | tig0027435:46581-46600 | None:intergenic | 35.0% |
| TTCATGAATTCTGACCTAGT+TGG | + | tig0027435:46674-46693 | Msa1433910:three_prime_UTR | 35.0% | |
| TCAGGCAGCAAAATTAAATC+AGG | - | tig0027435:46815-46834 | None:intergenic | 35.0% | |
| AATTGGGGAAAAAGCTAGTG+AGG | - | tig0027435:39521-39540 | None:intergenic | 40.0% | |
| AACAAGAAAACCGTACGGTT+CGG | - | tig0027435:39545-39564 | None:intergenic | 40.0% | |
| CTGGCGAAATTGGGAATTAT+TGG | + | tig0027435:39929-39948 | Msa1433910:CDS | 40.0% | |
| GCGAAATTGGGAATTATTGG+TGG | + | tig0027435:39932-39951 | Msa1433910:CDS | 40.0% | |
| AGTCTTTACAATGTTGAGGG+AGG | + | tig0027435:39980-39999 | Msa1433910:CDS | 40.0% | |
| !!! | GGTCATTTTCTAGGGTTTAG+GGG | + | tig0027435:40048-40067 | Msa1433910:intron | 40.0% |
| GTTGTGTAGGTTTATCCTGA+AGG | + | tig0027435:40139-40158 | Msa1433910:intron | 40.0% | |
| ATCACAAAATGCGTTCCTTC+AGG | - | tig0027435:40157-40176 | None:intergenic | 40.0% | |
| ! | GAAGTACTCTCAACCAAATG+AGG | - | tig0027435:40223-40242 | None:intergenic | 40.0% |
| !! | CATTTGGTTGAGAGTACTTC+TGG | + | tig0027435:40223-40242 | Msa1433910:intron | 40.0% |
| !! | GCTGTTTTCATAAGCTACCT+TGG | + | tig0027435:40408-40427 | Msa1433910:intron | 40.0% |
| ! | CTCTTGACATAGGTATTGTG+AGG | - | tig0027435:40508-40527 | None:intergenic | 40.0% |
| GATTTCAGGCATGTTTGGAT+TGG | - | tig0027435:40550-40569 | None:intergenic | 40.0% | |
| AACTGGATTTCAGGCATGTT+TGG | - | tig0027435:40555-40574 | None:intergenic | 40.0% | |
| GTATTTGAACAACTGCTAGG+TGG | + | tig0027435:41086-41105 | Msa1433910:intron | 40.0% | |
| AATCTTGTGATCCTGGCATT+TGG | + | tig0027435:41253-41272 | Msa1433910:intron | 40.0% | |
| ATTCTATACCAATCCTGCCA+AGG | + | tig0027435:41380-41399 | Msa1433910:intron | 40.0% | |
| AAAATGGAGAGGGTTGTGTT+AGG | + | tig0027435:41421-41440 | Msa1433910:intron | 40.0% | |
| AGTACAGTGTCAAATGAGCA+AGG | + | tig0027435:41550-41569 | Msa1433910:intron | 40.0% | |
| GTACAGTGTCAAATGAGCAA+GGG | + | tig0027435:41551-41570 | Msa1433910:intron | 40.0% | |
| AGAAGCTAGTTCATGAGAGT+AGG | + | tig0027435:41647-41666 | Msa1433910:intron | 40.0% | |
| ! | CATGAGAGTAGGATTCGTTT+TGG | + | tig0027435:41658-41677 | Msa1433910:intron | 40.0% |
| !!! | GTAGGATTCGTTTTGGAACT+TGG | + | tig0027435:41665-41684 | Msa1433910:intron | 40.0% |
| TAGTAGACACTATGACTAGG+AGG | + | tig0027435:41722-41741 | Msa1433910:intron | 40.0% | |
| TGTGCCTACAAGAAACTAAG+TGG | + | tig0027435:41758-41777 | Msa1433910:intron | 40.0% | |
| GTGCCTACAAGAAACTAAGT+GGG | + | tig0027435:41759-41778 | Msa1433910:intron | 40.0% | |
| CTACAAGAAACTAAGTGGGT+GGG | + | tig0027435:41763-41782 | Msa1433910:intron | 40.0% | |
| TACAAGAAACTAAGTGGGTG+GGG | + | tig0027435:41764-41783 | Msa1433910:intron | 40.0% | |
| GCGAGAGAATTAGATAGTTC+AGG | + | tig0027435:41793-41812 | Msa1433910:intron | 40.0% | |
| ! | GGATTTAAGCTTTGGTACAC+GGG | + | tig0027435:41814-41833 | Msa1433910:intron | 40.0% |
| GGCGAAGTTAGATCAAGAAA+TGG | + | tig0027435:41835-41854 | Msa1433910:intron | 40.0% | |
| GTTAGATCAAGAAATGGGGT+AGG | + | tig0027435:41841-41860 | Msa1433910:intron | 40.0% | |
| GGAGTGGAAGAAAGATATTG+TGG | + | tig0027435:41879-41898 | Msa1433910:intron | 40.0% | |
| AATTAGCGTTTATGCACCTC+AGG | + | tig0027435:41969-41988 | Msa1433910:intron | 40.0% | |
| TGTTCTTCTAATCCTACCTG+AGG | - | tig0027435:41988-42007 | None:intergenic | 40.0% | |
| GGAGCTAGAAGGATTAATTC+AGG | + | tig0027435:42029-42048 | Msa1433910:intron | 40.0% | |
| ! | TTTCTAGGAGGGGATTTGAA+TGG | + | tig0027435:42075-42094 | Msa1433910:intron | 40.0% |
| ! | TTCTAGGAGGGGATTTGAAT+GGG | + | tig0027435:42076-42095 | Msa1433910:intron | 40.0% |
| CATCTCATCACTTACAAGAG+TGG | + | tig0027435:42246-42265 | Msa1433910:intron | 40.0% | |
| TCTCATCACTTACAAGAGTG+GGG | + | tig0027435:42248-42267 | Msa1433910:intron | 40.0% | |
| GAAATCGATCTGAGAACAAG+AGG | - | tig0027435:42274-42293 | None:intergenic | 40.0% | |
| TGTAAAGTCATACCTGGAGA+GGG | + | tig0027435:42333-42352 | Msa1433910:intron | 40.0% | |
| CCATCACCATTACTCTATGT+TGG | - | tig0027435:42368-42387 | None:intergenic | 40.0% | |
| CCAACATAGAGTAATGGTGA+TGG | + | tig0027435:42365-42384 | Msa1433910:intron | 40.0% | |
| !! | GAGTAATGGTGATGGATGTA+AGG | + | tig0027435:42373-42392 | Msa1433910:intron | 40.0% |
| ! | TGATGGATGTAAGGGTTAAG+AGG | + | tig0027435:42382-42401 | Msa1433910:intron | 40.0% |
| CTCCCTCTAATATCTTGTGT+TGG | - | tig0027435:42485-42504 | None:intergenic | 40.0% | |
| CAACACAAGATATTAGAGGG+AGG | + | tig0027435:42483-42502 | Msa1433910:intron | 40.0% | |
| AGATATTAGAGGGAGGTTTC+AGG | + | tig0027435:42490-42509 | Msa1433910:intron | 40.0% | |
| ATATCATTAGCGCTTCCATG+TGG | - | tig0027435:42519-42538 | None:intergenic | 40.0% | |
| !! | ATGGAAGCGCTAATGATATG+TGG | + | tig0027435:42520-42539 | Msa1433910:intron | 40.0% |
| !! | TGGAAGCGCTAATGATATGT+GGG | + | tig0027435:42521-42540 | Msa1433910:intron | 40.0% |
| GATGGCTCATGAGATTAAGA+AGG | + | tig0027435:42548-42567 | Msa1433910:intron | 40.0% | |
| ! | TTGGGAGAATCTAGAGGTTT+TGG | + | tig0027435:42585-42604 | Msa1433910:intron | 40.0% |
| !!! | AATCTAGAGGTTTTGGACCT+AGG | + | tig0027435:42592-42611 | Msa1433910:intron | 40.0% |
| !!! | ATCTAGAGGTTTTGGACCTA+GGG | + | tig0027435:42593-42612 | Msa1433910:intron | 40.0% |
| CAATCTTTAGGTACCAAGGA+GGG | + | tig0027435:42795-42814 | Msa1433910:intron | 40.0% | |
| AATCTTTAGGTACCAAGGAG+GGG | + | tig0027435:42796-42815 | Msa1433910:intron | 40.0% | |
| TAATACACTTCACTTGGTCC+AGG | - | tig0027435:42872-42891 | None:intergenic | 40.0% | |
| GGACCAAGTGAAGTGTATTA+AGG | + | tig0027435:42872-42891 | Msa1433910:intron | 40.0% | |
| GGTGCAAGAGAGAGATATTA+AGG | + | tig0027435:42914-42933 | Msa1433910:intron | 40.0% | |
| AGATCTTACCAGACTCTAAC+AGG | + | tig0027435:42982-43001 | Msa1433910:intron | 40.0% | |
| ATGTCTAACCTGTTAGAGTC+TGG | - | tig0027435:42993-43012 | None:intergenic | 40.0% | |
| TAACAGGTTAGACATCAGAG+AGG | + | tig0027435:42998-43017 | Msa1433910:intron | 40.0% | |
| !! | AGGTGAAAGAAGCGTTGAAA+AGG | + | tig0027435:43063-43082 | Msa1433910:intron | 40.0% |
| GCGTTGAAAAGGATGAGTAA+TGG | + | tig0027435:43074-43093 | Msa1433910:intron | 40.0% | |
| GAAAAGGATGAGTAATGGCA+AGG | + | tig0027435:43079-43098 | Msa1433910:intron | 40.0% | |
| ACTTCGATAGGTATGTTGTC+CGG | - | tig0027435:43113-43132 | None:intergenic | 40.0% | |
| ACAACATACCTATCGAAGTG+TGG | + | tig0027435:43114-43133 | Msa1433910:intron | 40.0% | |
| ! | AGACTTTTCCACACTTCGAT+AGG | - | tig0027435:43125-43144 | None:intergenic | 40.0% |
| ATCGAAGTGTGGAAAAGTCT+TGG | + | tig0027435:43125-43144 | Msa1433910:intron | 40.0% | |
| TCCCCCTTGTTCTTATAGAT+TGG | - | tig0027435:43242-43261 | None:intergenic | 40.0% | |
| CAAGATTGCGCGAATTATAG+GGG | + | tig0027435:43266-43285 | Msa1433910:intron | 40.0% | |
| ATACCATGAAGTTATGGGAG+AGG | + | tig0027435:43306-43325 | Msa1433910:intron | 40.0% | |
| TACCATGAAGTTATGGGAGA+GGG | + | tig0027435:43307-43326 | Msa1433910:intron | 40.0% | |
| CACGTTACGGATAACCAATT+TGG | + | tig0027435:43359-43378 | Msa1433910:intron | 40.0% | |
| TCCCAGGCATAAAACCAAAT+TGG | - | tig0027435:43376-43395 | None:intergenic | 40.0% | |
| !!! | AATTTGGTTTTATGCCTGGG+AGG | + | tig0027435:43375-43394 | Msa1433910:intron | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | tig0027435:43504-43523 | Msa1433910:intron | 40.0% |
| GCTTTCCACAAAATCTCTCT+AGG | - | tig0027435:43512-43531 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | tig0027435:43556-43575 | Msa1433910:intron | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | + | tig0027435:43568-43587 | Msa1433910:intron | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | + | tig0027435:43569-43588 | Msa1433910:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | tig0027435:43641-43660 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | tig0027435:43642-43661 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | tig0027435:43641-43660 | Msa1433910:intron | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | + | tig0027435:43642-43661 | Msa1433910:intron | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | + | tig0027435:43902-43921 | Msa1433910:intron | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | - | tig0027435:43909-43928 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | tig0027435:43965-43984 | Msa1433910:intron | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | + | tig0027435:44004-44023 | Msa1433910:intron | 40.0% | |
| ! | AAGGTACCACTTAAGCTGAA+AGG | + | tig0027435:44070-44089 | Msa1433910:intron | 40.0% |
| GTGGTAAGACTAGACATGAT+AGG | + | tig0027435:44212-44231 | Msa1433910:intron | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | + | tig0027435:44243-44262 | Msa1433910:intron | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | + | tig0027435:44244-44263 | Msa1433910:intron | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | + | tig0027435:44245-44264 | Msa1433910:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | tig0027435:44376-44395 | Msa1433910:intron | 40.0% | |
| GCCAATCACCAGATGTTTAA+CGG | - | tig0027435:44789-44808 | None:intergenic | 40.0% | |
| TCAAACAACCCTGTGAAAGT+GGG | - | tig0027435:44894-44913 | None:intergenic | 40.0% | |
| ATCAAACAACCCTGTGAAAG+TGG | - | tig0027435:44895-44914 | None:intergenic | 40.0% | |
| ACCTGTAAAGTGTGTACATG+CGG | - | tig0027435:45089-45108 | None:intergenic | 40.0% | |
| !! | TGAGAGGGCTAAATTTGTTG+TGG | + | tig0027435:45787-45806 | Msa1433910:CDS | 40.0% |
| ! | AAGTGCTGTAATTAGAGCAC+AGG | + | tig0027435:45832-45851 | Msa1433910:CDS | 40.0% |
| TTCTTATGCAGTTACTGCTG+TGG | + | tig0027435:45872-45891 | Msa1433910:intron | 40.0% | |
| ATGTGTAAAAAAGGTCAGGG+GGG | - | tig0027435:46375-46394 | None:intergenic | 40.0% | |
| GATGTGTAAAAAAGGTCAGG+GGG | - | tig0027435:46376-46395 | None:intergenic | 40.0% | |
| ! | TTTTACACATCAACAGGGTG+AGG | + | tig0027435:46385-46404 | Msa1433910:intron | 40.0% |
| TGTGATGAAAGCTGGATTGT+TGG | - | tig0027435:46444-46463 | None:intergenic | 40.0% | |
| TTCAGCAAACAAGGTTTACC+TGG | + | tig0027435:46511-46530 | Msa1433910:CDS | 40.0% | |
| GATCCTAGCAAAAAATGAGC+TGG | + | tig0027435:46575-46594 | Msa1433910:exon | 40.0% | |
| GTTGTCTGTTCATTCCAACT+AGG | - | tig0027435:46691-46710 | None:intergenic | 40.0% | |
| ATGAACAGACAACTCCATGA+CGG | + | tig0027435:46698-46717 | Msa1433910:three_prime_UTR | 40.0% | |
| !! | CATGACGGCCTTGTTAATTT+GGG | + | tig0027435:46713-46732 | Msa1433910:three_prime_UTR | 40.0% |
| !! | ATGACGGCCTTGTTAATTTG+GGG | + | tig0027435:46714-46733 | Msa1433910:three_prime_UTR | 40.0% |
| GCAACTTGGATCATTCGTTT+GGG | - | tig0027435:46756-46775 | None:intergenic | 40.0% | |
| TGCAACTTGGATCATTCGTT+TGG | - | tig0027435:46757-46776 | None:intergenic | 40.0% | |
| CTACCTCCAGTTATTGAATC+TGG | + | tig0027435:46786-46805 | Msa1433910:three_prime_UTR | 40.0% | |
| ATGCCAGATTCAATAACTGG+AGG | - | tig0027435:46792-46811 | None:intergenic | 40.0% | |
| AGGATGCCAGATTCAATAAC+TGG | - | tig0027435:46795-46814 | None:intergenic | 40.0% | |
| ACAAGAAAACCGTACGGTTC+GGG | - | tig0027435:39544-39563 | None:intergenic | 45.0% | |
| CTACTTCATCGCAATCTTCG+AGG | + | tig0027435:39633-39652 | Msa1433910:five_prime_UTR | 45.0% | |
| AAGAACGCGAAAGTTCCAAG+TGG | + | tig0027435:39890-39909 | Msa1433910:CDS | 45.0% | |
| TGCATCAACACTGGCGAAAT+TGG | + | tig0027435:39919-39938 | Msa1433910:CDS | 45.0% | |
| GCATCAACACTGGCGAAATT+GGG | + | tig0027435:39920-39939 | Msa1433910:CDS | 45.0% | |
| GACGGTTAAACACGATAGCA+CGG | - | tig0027435:40009-40028 | None:intergenic | 45.0% | |
| ATCGTGTTTAACCGTCTCGT+TGG | + | tig0027435:40013-40032 | Msa1433910:CDS | 45.0% | |
| TGTCTTTGACACCAACGAGA+CGG | - | tig0027435:40027-40046 | None:intergenic | 45.0% | |
| !! | TCTCGTTGGTGTCAAAGACA+AGG | + | tig0027435:40027-40046 | Msa1433910:CDS | 45.0% |
| ! | GAACGCATTTTGTGATTCCG+TGG | + | tig0027435:40161-40180 | Msa1433910:CDS | 45.0% |
| TTGTGATTCCGTGGTTTGAG+AGG | + | tig0027435:40170-40189 | Msa1433910:CDS | 45.0% | |
| GCACGAACATCATAGATCAC+CGG | - | tig0027435:40196-40215 | None:intergenic | 45.0% | |
| TACTTTGTTAACTAGGGGGG+TGG | - | tig0027435:40728-40747 | None:intergenic | 45.0% | |
| GGAGAGGCAATCCTTAACAA+AGG | - | tig0027435:40929-40948 | None:intergenic | 45.0% | |
| ! | ACAACCCTCTCCATTTTACC+CGG | - | tig0027435:41418-41437 | None:intergenic | 45.0% |
| !! | AAGTTTTACGTTGGCTGTCG+AGG | - | tig0027435:41447-41466 | None:intergenic | 45.0% |
| TAGACACTATGACTAGGAGG+AGG | + | tig0027435:41725-41744 | Msa1433910:intron | 45.0% | |
| CCACCCACTTAGTTTCTTGT+AGG | - | tig0027435:41765-41784 | None:intergenic | 45.0% | |
| CCTACAAGAAACTAAGTGGG+TGG | + | tig0027435:41762-41781 | Msa1433910:intron | 45.0% | |
| AACTAAGTGGGTGGGGAAAA+AGG | + | tig0027435:41771-41790 | Msa1433910:intron | 45.0% | |
| AAATGGGGTAGGCATCATTG+TGG | + | tig0027435:41852-41871 | Msa1433910:intron | 45.0% | |
| GGTAGGCATCATTGTGGATA+AGG | + | tig0027435:41858-41877 | Msa1433910:intron | 45.0% | |
| GCATCATTGTGGATAAGGAG+TGG | + | tig0027435:41863-41882 | Msa1433910:intron | 45.0% | |
| !!! | AAGTTTTGGGAGGAGCTAGA+AGG | + | tig0027435:42018-42037 | Msa1433910:intron | 45.0% |
| GGGATTTGAATGGGCATGTA+GGG | + | tig0027435:42085-42104 | Msa1433910:intron | 45.0% | |
| ATTTGAATGGGCATGTAGGG+AGG | + | tig0027435:42088-42107 | Msa1433910:intron | 45.0% | |
| TTTGAATGGGCATGTAGGGA+GGG | + | tig0027435:42089-42108 | Msa1433910:intron | 45.0% | |
| CTGTAAAGTCATACCTGGAG+AGG | + | tig0027435:42332-42351 | Msa1433910:intron | 45.0% | |
| TGGATGTAAGGGTTAAGAGG+AGG | + | tig0027435:42385-42404 | Msa1433910:intron | 45.0% | |
| GGATGTAAGGGTTAAGAGGA+GGG | + | tig0027435:42386-42405 | Msa1433910:intron | 45.0% | |
| ! | AAATGCCACCACTTGATTCG+CGG | - | tig0027435:42438-42457 | None:intergenic | 45.0% |
| !! | GGAAGCGCTAATGATATGTG+GGG | + | tig0027435:42522-42541 | Msa1433910:intron | 45.0% |
| ! | GAAGCGCTAATGATATGTGG+GGG | + | tig0027435:42523-42542 | Msa1433910:intron | 45.0% |
| TAATGATATGTGGGGGAGGA+TGG | + | tig0027435:42530-42549 | Msa1433910:intron | 45.0% | |
| GGCTCATGAGATTAAGAAGG+TGG | + | tig0027435:42551-42570 | Msa1433910:intron | 45.0% | |
| AAGGTGGCAAAAGAGACGTT+GGG | + | tig0027435:42567-42586 | Msa1433910:intron | 45.0% | |
| !!! | TCTAGAGGTTTTGGACCTAG+GGG | + | tig0027435:42594-42613 | Msa1433910:intron | 45.0% |
| GACCTAGGGGTAAAGAATCT+TGG | + | tig0027435:42607-42626 | Msa1433910:intron | 45.0% | |
| CACCAAGATTCTTTACCCCT+AGG | - | tig0027435:42612-42631 | None:intergenic | 45.0% | |
| CTAGGGGTAAAGAATCTTGG+TGG | + | tig0027435:42610-42629 | Msa1433910:intron | 45.0% | |
| AGCTAGGAAAGAGGCTAAGA+AGG | + | tig0027435:42731-42750 | Msa1433910:intron | 45.0% | |
| TAGGAAAGAGGCTAAGAAGG+CGG | + | tig0027435:42734-42753 | Msa1433910:intron | 45.0% | |
| GCGAGAACTCAAGCATTTGA+AGG | + | tig0027435:42765-42784 | Msa1433910:intron | 45.0% | |
| CCTCCTTGGTACCTAAAGAT+TGG | - | tig0027435:42797-42816 | None:intergenic | 45.0% | |
| CCAATCTTTAGGTACCAAGG+AGG | + | tig0027435:42794-42813 | Msa1433910:intron | 45.0% | |
| ATCTTTAGGTACCAAGGAGG+GGG | + | tig0027435:42797-42816 | Msa1433910:intron | 45.0% | |
| TATAGATTTCTCCCCCTCCT+TGG | - | tig0027435:42811-42830 | None:intergenic | 45.0% | |
| AGAACGAAAGACAAGAGACC+TGG | + | tig0027435:42851-42870 | Msa1433910:intron | 45.0% | |
| ! | GGATGAAGAGGGTAGAGTTT+TGG | + | tig0027435:42893-42912 | Msa1433910:intron | 45.0% |
| ATGAGTAATGGCAAGGCAGT+TGG | + | tig0027435:43086-43105 | Msa1433910:intron | 45.0% | |
| TGAGTAATGGCAAGGCAGTT+GGG | + | tig0027435:43087-43106 | Msa1433910:intron | 45.0% | |
| TGGAAAAGTCTTGGCGATAG+AGG | + | tig0027435:43134-43153 | Msa1433910:intron | 45.0% | |
| TACCCTCTCCCATAACTTCA+TGG | - | tig0027435:43312-43331 | None:intergenic | 45.0% | |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | tig0027435:43514-43533 | Msa1433910:intron | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | - | tig0027435:43724-43743 | None:intergenic | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | tig0027435:43752-43771 | Msa1433910:intron | 45.0% |
| AGTCGAGGGAGGAGTTAAAT+GGG | + | tig0027435:43777-43796 | Msa1433910:intron | 45.0% | |
| TAAATGGGAGGCTAGAGACT+TGG | + | tig0027435:43792-43811 | Msa1433910:intron | 45.0% | |
| !! | ACTCCGTCTTGTTTCTACTC+AGG | - | tig0027435:43847-43866 | None:intergenic | 45.0% |
| ATCATCGTATTCAAGCTGGG+TGG | + | tig0027435:44008-44027 | Msa1433910:intron | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | tig0027435:44017-44036 | Msa1433910:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | tig0027435:44031-44050 | Msa1433910:intron | 45.0% | |
| AGGTGTGTTGTGCGATAAGA+AGG | + | tig0027435:44051-44070 | Msa1433910:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | tig0027435:44117-44136 | Msa1433910:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | tig0027435:44121-44140 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | tig0027435:44125-44144 | Msa1433910:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | tig0027435:44126-44145 | Msa1433910:intron | 45.0% |
| CGCTTACTTTACTCTCGTGT+TGG | - | tig0027435:44162-44181 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | tig0027435:44165-44184 | Msa1433910:intron | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | + | tig0027435:44246-44265 | Msa1433910:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | tig0027435:44360-44379 | Msa1433910:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | tig0027435:44370-44389 | Msa1433910:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | tig0027435:44516-44535 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | tig0027435:44517-44536 | None:intergenic | 45.0% |
| ! | TGGTTGTTGGTTGTGTTGGT+TGG | + | tig0027435:44535-44554 | Msa1433910:intron | 45.0% |
| !! | GGTTGTTGGTTGTGTTGGTT+GGG | + | tig0027435:44536-44555 | Msa1433910:intron | 45.0% |
| GATCATTTCCGTTGTCTGTG+TGG | + | tig0027435:44728-44747 | Msa1433910:intron | 45.0% | |
| GCCGTTAAACATCTGGTGAT+TGG | + | tig0027435:44785-44804 | Msa1433910:intron | 45.0% | |
| TCCTTTCTCCCACTTTCACA+GGG | + | tig0027435:44883-44902 | Msa1433910:intron | 45.0% | |
| ACCGCATGTACACACTTTAC+AGG | + | tig0027435:45085-45104 | Msa1433910:intron | 45.0% | |
| GCCAGCTACCTACAGTTTAT+CGG | + | tig0027435:45147-45166 | Msa1433910:CDS | 45.0% | |
| TCCGATAAACTGTAGGTAGC+TGG | - | tig0027435:45151-45170 | None:intergenic | 45.0% | |
| AAGTTGGCTGGCATTGTACT+GGG | - | tig0027435:45243-45262 | None:intergenic | 45.0% | |
| ! | TAAGTTGGCTGGCATTGTAC+TGG | - | tig0027435:45244-45263 | None:intergenic | 45.0% |
| CCAGCCAACTTATTACACAG+CGG | + | tig0027435:45252-45271 | Msa1433910:CDS | 45.0% | |
| CAGCCAACTTATTACACAGC+GGG | + | tig0027435:45253-45272 | Msa1433910:CDS | 45.0% | |
| AGGCTGTTAGTCGTGAAATC+CGG | + | tig0027435:45639-45658 | Msa1433910:intron | 45.0% | |
| ! | TACTAGTCTGACCTTTGGCA+AGG | + | tig0027435:45718-45737 | Msa1433910:CDS | 45.0% |
| AGCAGTAAACTCCTTGCCAA+AGG | - | tig0027435:45732-45751 | None:intergenic | 45.0% | |
| TGCCCTTAGGCCATTGTTTA+AGG | + | tig0027435:46115-46134 | Msa1433910:intron | 45.0% | |
| AACACGTCATGCTAACCCTA+AGG | - | tig0027435:46244-46263 | None:intergenic | 45.0% | |
| !! | GCTAAAAGTGCCCAACTGAT+CGG | + | tig0027435:46407-46426 | Msa1433910:CDS | 45.0% |
| ! | AATGGCTTGTCCGATCAGTT+GGG | - | tig0027435:46420-46439 | None:intergenic | 45.0% |
| GAAAGCTGGATTGTTGGCAA+TGG | - | tig0027435:46438-46457 | None:intergenic | 45.0% | |
| ATCCAGCTTTCATCACACTG+AGG | + | tig0027435:46447-46466 | Msa1433910:CDS | 45.0% | |
| TTCCTCAGTGTGATGAAAGC+TGG | - | tig0027435:46452-46471 | None:intergenic | 45.0% | |
| AACAAGGTTTACCTGGAAGC+AGG | + | tig0027435:46518-46537 | Msa1433910:CDS | 45.0% | |
| GAATCTTCAGCGGATCAACT+TGG | + | tig0027435:46553-46572 | Msa1433910:CDS | 45.0% | |
| CCAAATTAACAAGGCCGTCA+TGG | - | tig0027435:46715-46734 | None:intergenic | 45.0% | |
| !! | CCATGACGGCCTTGTTAATT+TGG | + | tig0027435:46712-46731 | Msa1433910:three_prime_UTR | 45.0% |
| !! | TGACGGCCTTGTTAATTTGG+GGG | + | tig0027435:46715-46734 | Msa1433910:three_prime_UTR | 45.0% |
| ATCCCTCCCCCAAATTAACA+AGG | - | tig0027435:46724-46743 | None:intergenic | 45.0% | |
| GCTGCCTGAAATAAGTTCGT+TGG | + | tig0027435:46826-46845 | Msa1433910:three_prime_UTR | 45.0% | |
| ! | AACCGTACGGTTCGGGAATT+GGG | - | tig0027435:39537-39556 | None:intergenic | 50.0% |
| ! | AAACCGTACGGTTCGGGAAT+TGG | - | tig0027435:39538-39557 | None:intergenic | 50.0% |
| AACGCGAAAGTTCCAAGTGG+TGG | + | tig0027435:39893-39912 | Msa1433910:CDS | 50.0% | |
| !! | GGGTGCGTTGTTTGTTGTGT+AGG | + | tig0027435:40126-40145 | Msa1433910:intron | 50.0% |
| TGTTCGTGCACGTCCTCATT+TGG | + | tig0027435:40207-40226 | Msa1433910:intron | 50.0% | |
| GCAGATGGTAAGTCCCTGTT+TGG | + | tig0027435:40258-40277 | Msa1433910:intron | 50.0% | |
| TATACCAATCCTGCCAAGGC+CGG | + | tig0027435:41384-41403 | Msa1433910:intron | 50.0% | |
| ! | TCTCCATTTTACCCGGGCTT+GGG | - | tig0027435:41411-41430 | None:intergenic | 50.0% |
| AAGCCCGGGTAAAATGGAGA+GGG | + | tig0027435:41411-41430 | Msa1433910:intron | 50.0% | |
| ! | CAACCCTCTCCATTTTACCC+GGG | - | tig0027435:41417-41436 | None:intergenic | 50.0% |
| GGTTCCCACATCTTCGTGAA+CGG | + | tig0027435:41614-41633 | Msa1433910:intron | 50.0% | |
| GTTCCCACATCTTCGTGAAC+GGG | + | tig0027435:41615-41634 | Msa1433910:intron | 50.0% | |
| AGCGTTTATGCACCTCAGGT+AGG | + | tig0027435:41973-41992 | Msa1433910:intron | 50.0% | |
| GGGGATTTGAATGGGCATGT+AGG | + | tig0027435:42084-42103 | Msa1433910:intron | 50.0% | |
| AGGGTTTCGAGAGGTTTCGA+GGG | + | tig0027435:42108-42127 | Msa1433910:intron | 50.0% | |
| GGCAAAGAGAAGAGACCGTA+GGG | + | tig0027435:42407-42426 | Msa1433910:intron | 50.0% | |
| GCAAAGAGAAGAGACCGTAG+GGG | + | tig0027435:42408-42427 | Msa1433910:intron | 50.0% | |
| CAAAGAGAAGAGACCGTAGG+GGG | + | tig0027435:42409-42428 | Msa1433910:intron | 50.0% | |
| AAAGAGAAGAGACCGTAGGG+GGG | + | tig0027435:42410-42429 | Msa1433910:intron | 50.0% | |
| ! | AATGCCACCACTTGATTCGC+GGG | - | tig0027435:42437-42456 | None:intergenic | 50.0% |
| GAAGGTGGCAAAAGAGACGT+TGG | + | tig0027435:42566-42585 | Msa1433910:intron | 50.0% | |
| GAGACGTTGGGAGAATCTAG+AGG | + | tig0027435:42579-42598 | Msa1433910:intron | 50.0% | |
| GGGGTAAAGAATCTTGGTGG+TGG | + | tig0027435:42613-42632 | Msa1433910:intron | 50.0% | |
| CAGGTTAGACATCAGAGAGG+AGG | + | tig0027435:43001-43020 | Msa1433910:intron | 50.0% | |
| TAGACATCAGAGAGGAGGAC+CGG | + | tig0027435:43006-43025 | Msa1433910:intron | 50.0% | |
| AGTCTTGGCGATAGAGGAGT+TGG | + | tig0027435:43140-43159 | Msa1433910:intron | 50.0% | |
| GTCTTGGCGATAGAGGAGTT+GGG | + | tig0027435:43141-43160 | Msa1433910:intron | 50.0% | |
| CGAAGAAAATGCCAGACGAG+TGG | + | tig0027435:43198-43217 | Msa1433910:intron | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | + | tig0027435:43415-43434 | Msa1433910:intron | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | + | tig0027435:43524-43543 | Msa1433910:intron | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | + | tig0027435:43525-43544 | Msa1433910:intron | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | + | tig0027435:43526-43545 | Msa1433910:intron | 50.0% | |
| AAGCGCCCTCATACATATCC+TGG | - | tig0027435:43577-43596 | None:intergenic | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | - | tig0027435:43661-43680 | None:intergenic | 50.0% | |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | tig0027435:43762-43781 | Msa1433910:intron | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | tig0027435:43763-43782 | Msa1433910:intron | 50.0% |
| GAGTCGAGGGAGGAGTTAAA+TGG | + | tig0027435:43776-43795 | Msa1433910:intron | 50.0% | |
| ! | AGGCAAGCCTTAGAAGCGTA+TGG | + | tig0027435:43815-43834 | Msa1433910:intron | 50.0% |
| GCGGAAACCATACGCTTCTA+AGG | - | tig0027435:43825-43844 | None:intergenic | 50.0% | |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | - | tig0027435:43844-43863 | None:intergenic | 50.0% |
| CCGCCTGAGTAGAAACAAGA+CGG | + | tig0027435:43841-43860 | Msa1433910:intron | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | + | tig0027435:43892-43911 | Msa1433910:intron | 50.0% | |
| CTTATCGCACAACACACCTG+AGG | - | tig0027435:44050-44069 | None:intergenic | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | + | tig0027435:44112-44131 | Msa1433910:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | tig0027435:44173-44192 | Msa1433910:intron | 50.0% |
| AGGATGTTGCGTTGGATGAG+TGG | + | tig0027435:44193-44212 | Msa1433910:intron | 50.0% | |
| CTTCTTACCACGGCGTCTAT+TGG | - | tig0027435:44337-44356 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | tig0027435:44512-44531 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | tig0027435:44518-44537 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | tig0027435:44515-44534 | Msa1433910:intron | 50.0% | |
| ! | GTGGGATAAGGCTTGGTTGT+TGG | + | tig0027435:44522-44541 | Msa1433910:intron | 50.0% |
| ! | GGCTTGGTTGTTGGTTGTGT+TGG | + | tig0027435:44531-44550 | Msa1433910:intron | 50.0% |
| GTCCTTTCTCCCACTTTCAC+AGG | + | tig0027435:44882-44901 | Msa1433910:intron | 50.0% | |
| ACCCTGTGAAAGTGGGAGAA+AGG | - | tig0027435:44887-44906 | None:intergenic | 50.0% | |
| TAAACTGTAGGTAGCTGGCC+AGG | - | tig0027435:45146-45165 | None:intergenic | 50.0% | |
| CCAAGGGTCCGATAAACTGT+AGG | - | tig0027435:45158-45177 | None:intergenic | 50.0% | |
| CCTACAGTTTATCGGACCCT+TGG | + | tig0027435:45155-45174 | Msa1433910:CDS | 50.0% | |
| ! | CCGCTGTGTAATAAGTTGGC+TGG | - | tig0027435:45255-45274 | None:intergenic | 50.0% |
| CCTCCCGCTGTGTAATAAGT+TGG | - | tig0027435:45259-45278 | None:intergenic | 50.0% | |
| CCAACTTATTACACAGCGGG+AGG | + | tig0027435:45256-45275 | Msa1433910:CDS | 50.0% | |
| ! | CAAACCATGTTGCTTGGGTG+AGG | + | tig0027435:45325-45344 | Msa1433910:intron | 50.0% |
| GATACCTCACCCAAGCAACA+TGG | - | tig0027435:45332-45351 | None:intergenic | 50.0% | |
| TCCGGAAGATTCTGACTGAG+AGG | + | tig0027435:45657-45676 | Msa1433910:CDS | 50.0% | |
| CCCTCTCAGTCAGAATCTTC+CGG | - | tig0027435:45661-45680 | None:intergenic | 50.0% | |
| CCGGAAGATTCTGACTGAGA+GGG | + | tig0027435:45658-45677 | Msa1433910:CDS | 50.0% | |
| TGCTGCAATTGAAGCCAAGC+AGG | + | tig0027435:45748-45767 | Msa1433910:CDS | 50.0% | |
| TGCAATTGAAGCCAAGCAGG+TGG | + | tig0027435:45751-45770 | Msa1433910:CDS | 50.0% | |
| ! | CAATGGCTTGTCCGATCAGT+TGG | - | tig0027435:46421-46440 | None:intergenic | 50.0% |
| AACATGTGCTATCTCCCTCG+CGG | - | tig0027435:46483-46502 | None:intergenic | 50.0% | |
| GCAAAAGATCACCTGCTTCC+AGG | - | tig0027435:46532-46551 | None:intergenic | 50.0% | |
| !! | GGCCTTGTTAATTTGGGGGA+GGG | + | tig0027435:46719-46738 | Msa1433910:three_prime_UTR | 50.0% |
| TCCCCAATTCCCGAACCGTA+CGG | + | tig0027435:39532-39551 | Msa1433910:five_prime_UTR | 55.0% | |
| ! | ACCGTACGGTTCGGGAATTG+GGG | - | tig0027435:39536-39555 | None:intergenic | 55.0% |
| GATTCCGTGGTTTGAGAGGC+CGG | + | tig0027435:40174-40193 | Msa1433910:CDS | 55.0% | |
| ATCACCGGCCTCTCAAACCA+CGG | - | tig0027435:40181-40200 | None:intergenic | 55.0% | |
| TGGGAGTCGTGATCTGCAGA+TGG | + | tig0027435:40243-40262 | Msa1433910:intron | 55.0% | |
| ! | ATTTTACCCGGGCTTGGGAC+CGG | - | tig0027435:41406-41425 | None:intergenic | 55.0% |
| ! | CTCTCCATTTTACCCGGGCT+TGG | - | tig0027435:41412-41431 | None:intergenic | 55.0% |
| CAAGCCCGGGTAAAATGGAG+AGG | + | tig0027435:41410-41429 | Msa1433910:intron | 55.0% | |
| GTGAATGCTAGGTCGTTGCC+CGG | + | tig0027435:41505-41524 | Msa1433910:intron | 55.0% | |
| GCACCCGTTCACGAAGATGT+GGG | - | tig0027435:41621-41640 | None:intergenic | 55.0% | |
| CACATCTTCGTGAACGGGTG+CGG | + | tig0027435:41620-41639 | Msa1433910:intron | 55.0% | |
| ACATCTTCGTGAACGGGTGC+GGG | + | tig0027435:41621-41640 | Msa1433910:intron | 55.0% | |
| CATGTAGGGAGGGTTTCGAG+AGG | + | tig0027435:42099-42118 | Msa1433910:intron | 55.0% | |
| GAGGGTTTCGAGAGGTTTCG+AGG | + | tig0027435:42107-42126 | Msa1433910:intron | 55.0% | |
| ! | AGAGGTTTCGAGGGTGTGCA+TGG | + | tig0027435:42117-42136 | Msa1433910:intron | 55.0% |
| ! | GAGGTTTCGAGGGTGTGCAT+GGG | + | tig0027435:42118-42137 | Msa1433910:intron | 55.0% |
| ! | AGGTTTCGAGGGTGTGCATG+GGG | + | tig0027435:42119-42138 | Msa1433910:intron | 55.0% |
| TGGTCTCGGGGAGGTAAATG+CGG | + | tig0027435:42146-42165 | Msa1433910:intron | 55.0% | |
| TGGGTAGTTAAGCCCTCTCC+AGG | - | tig0027435:42348-42367 | None:intergenic | 55.0% | |
| GGGCAAAGAGAAGAGACCGT+AGG | + | tig0027435:42406-42425 | Msa1433910:intron | 55.0% | |
| ! | ATGCCACCACTTGATTCGCG+GGG | - | tig0027435:42436-42455 | None:intergenic | 55.0% |
| GGAGGTTTCAGGCAACCACA+TGG | + | tig0027435:42501-42520 | Msa1433910:intron | 55.0% | |
| GCGCTAATGATATGTGGGGG+AGG | + | tig0027435:42526-42545 | Msa1433910:intron | 55.0% | |
| TAATGGCAAGGCAGTTGGGC+CGG | + | tig0027435:43091-43110 | Msa1433910:intron | 55.0% | |
| TTGGCGATAGAGGAGTTGGG+TGG | + | tig0027435:43144-43163 | Msa1433910:intron | 55.0% | |
| GTGCTTCTTCTCCACTCGTC+TGG | - | tig0027435:43212-43231 | None:intergenic | 55.0% | |
| TATGCCTGGGAGGTCGACTA+TGG | + | tig0027435:43385-43404 | Msa1433910:intron | 55.0% | |
| ! | GACGCGTGATGGAGCGATAT+CGG | + | tig0027435:43426-43445 | Msa1433910:intron | 55.0% |
| ! | CGTGATGGAGCGATATCGGA+CGG | + | tig0027435:43430-43449 | Msa1433910:intron | 55.0% |
| CCTCACCCCTTTCTTCTCCA+GGG | - | tig0027435:43534-43553 | None:intergenic | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | - | tig0027435:43535-43554 | None:intergenic | 55.0% | |
| TTCGACTAGTGTGAGGACGC+AGG | + | tig0027435:43595-43614 | Msa1433910:intron | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | + | tig0027435:43599-43618 | Msa1433910:intron | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | + | tig0027435:43600-43619 | Msa1433910:intron | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | + | tig0027435:43601-43620 | Msa1433910:intron | 55.0% | |
| CGAGGGAGGAGTTAAATGGG+AGG | + | tig0027435:43780-43799 | Msa1433910:intron | 55.0% | |
| ATGGGAGGCTAGAGACTTGG+AGG | + | tig0027435:43795-43814 | Msa1433910:intron | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | + | tig0027435:44099-44118 | Msa1433910:intron | 55.0% | |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | tig0027435:44129-44148 | Msa1433910:intron | 55.0% |
| CGGAGATGAGGATGTTGCGT+TGG | + | tig0027435:44185-44204 | Msa1433910:intron | 55.0% | |
| GAGAAGACCAATAGACGCCG+TGG | + | tig0027435:44327-44346 | Msa1433910:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | tig0027435:44504-44523 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | tig0027435:44503-44522 | Msa1433910:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | tig0027435:44504-44523 | Msa1433910:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | tig0027435:44510-44529 | Msa1433910:intron | 55.0% | |
| GTCCTTACTCGTCCTTTGCC+TGG | + | tig0027435:45125-45144 | Msa1433910:CDS | 55.0% | |
| TTCTTGTGCAGCCACCTGCT+TGG | - | tig0027435:45765-45784 | None:intergenic | 55.0% | |
| TGGCTGCACAAGAAGCTGAG+AGG | + | tig0027435:45771-45790 | Msa1433910:CDS | 55.0% | |
| GGCTGCACAAGAAGCTGAGA+GGG | + | tig0027435:45772-45791 | Msa1433910:CDS | 55.0% | |
| TGAGGAAGATAGAAGCCGCG+AGG | + | tig0027435:46465-46484 | Msa1433910:CDS | 55.0% | |
| GAGGAAGATAGAAGCCGCGA+GGG | + | tig0027435:46466-46485 | Msa1433910:CDS | 55.0% | |
| !! | CGGCCTTGTTAATTTGGGGG+AGG | + | tig0027435:46718-46737 | Msa1433910:three_prime_UTR | 55.0% |
| GTTGATGCAGCGCCACCACT+TGG | - | tig0027435:39908-39927 | None:intergenic | 60.0% | |
| ! | TGGTGGCGCTGCATCAACAC+TGG | + | tig0027435:39910-39929 | Msa1433910:CDS | 60.0% |
| GGTCCCAAGCCCGGGTAAAA+TGG | + | tig0027435:41405-41424 | Msa1433910:intron | 60.0% | |
| CCATACAGCGCGTTGCTTCC+GGG | - | tig0027435:41526-41545 | None:intergenic | 60.0% | |
| GCCATACAGCGCGTTGCTTC+CGG | - | tig0027435:41527-41546 | None:intergenic | 60.0% | |
| CGCACCCGTTCACGAAGATG+TGG | - | tig0027435:41622-41641 | None:intergenic | 60.0% | |
| ! | GGTTTCGAGGGTGTGCATGG+GGG | + | tig0027435:42120-42139 | Msa1433910:intron | 60.0% |
| ! | GTTTCGAGGGTGTGCATGGG+GGG | + | tig0027435:42121-42140 | Msa1433910:intron | 60.0% |
| ! | GTGCATGGGGGGTATGGTCT+CGG | + | tig0027435:42132-42151 | Msa1433910:intron | 60.0% |
| ! | TGCATGGGGGGTATGGTCTC+GGG | + | tig0027435:42133-42152 | Msa1433910:intron | 60.0% |
| TCTCGGGGAGGTAAATGCGG+AGG | + | tig0027435:42149-42168 | Msa1433910:intron | 60.0% | |
| CTCGGGGAGGTAAATGCGGA+GGG | + | tig0027435:42150-42169 | Msa1433910:intron | 60.0% | |
| ! | TCGTCGGATTCAGGAGCACG+AGG | + | tig0027435:43043-43062 | Msa1433910:intron | 60.0% |
| GCTTCCATAGTCGACCTCCC+AGG | - | tig0027435:43392-43411 | None:intergenic | 60.0% | |
| CCCTGGAGAAGAAAGGGGTG+AGG | + | tig0027435:43531-43550 | Msa1433910:intron | 60.0% | |
| ! | AGGGCGCTTCGACTAGTGTG+AGG | + | tig0027435:43588-43607 | Msa1433910:intron | 60.0% |
| AGGACGCAGGATGGGGATAC+CGG | + | tig0027435:43608-43627 | Msa1433910:intron | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | tig0027435:43766-43785 | Msa1433910:intron | 60.0% |
| GGCCAGGCAAAGGACGAGTA+AGG | - | tig0027435:45130-45149 | None:intergenic | 60.0% | |
| GTAGGTAGCTGGCCAGGCAA+AGG | - | tig0027435:45140-45159 | None:intergenic | 60.0% | |
| GCAGTTACTGCTGTGGTGCC+TGG | + | tig0027435:45879-45898 | Msa1433910:intron | 60.0% | |
| CCCGGAAGCAACGCGCTGTA+TGG | + | tig0027435:41523-41542 | Msa1433910:intron | 65.0% | |
| ACATCCAGGCGGCGATGCAG+CGG | - | tig0027435:41577-41596 | None:intergenic | 65.0% | |
| ! | GAGGGTGTGCATGGGGGGTA+TGG | + | tig0027435:42126-42145 | Msa1433910:intron | 65.0% |
| ! | GCATGGGGGGTATGGTCTCG+GGG | + | tig0027435:42134-42153 | Msa1433910:intron | 65.0% |
| GGGACCGGCCTTGGCAGGAT+TGG | - | tig0027435:41391-41410 | None:intergenic | 70.0% | |
| ! | TGGGGGGTATGGTCTCGGGG+AGG | + | tig0027435:42137-42156 | Msa1433910:intron | 70.0% |
| TGATTCGCGGGGCCCCCCTA+CGG | - | tig0027435:42425-42444 | None:intergenic | 70.0% | |
| GGGCCCCGCGAATCAAGTGG+TGG | + | tig0027435:42430-42449 | Msa1433910:intron | 70.0% | |
| GGCTTGGGACCGGCCTTGGC+AGG | - | tig0027435:41396-41415 | None:intergenic | 75.0% | |
| GCCAAGGCCGGTCCCAAGCC+CGG | + | tig0027435:41396-41415 | Msa1433910:intron | 75.0% | |
| CCAAGGCCGGTCCCAAGCCC+GGG | + | tig0027435:41397-41416 | Msa1433910:intron | 75.0% | |
| GGGGGGCCCCGCGAATCAAG+TGG | + | tig0027435:42427-42446 | Msa1433910:intron | 75.0% | |
| ! | CCCGGGCTTGGGACCGGCCT+TGG | - | tig0027435:41400-41419 | None:intergenic | 80.0% |
| ! | AGGGCCGCTGCATCGCCGCC+TGG | + | tig0027435:41570-41589 | Msa1433910:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027435 | gene | 39495 | 46950 | 39495 | ID=Msa1433910;Name=Msa1433910 |
| tig0027435 | mRNA | 39495 | 46950 | 39495 | ID=Msa1433910-mRNA-1;Parent=Msa1433910;Name=Msa1433910-mRNA-1;_AED=0.11;_eAED=0.11;_QI=160|0.8|0.83|1|0.8|0.83|6|358|267 |
| tig0027435 | exon | 39495 | 39654 | 39495 | ID=Msa1433910-mRNA-1:exon:8891;Parent=Msa1433910-mRNA-1 |
| tig0027435 | exon | 39881 | 40048 | 39881 | ID=Msa1433910-mRNA-1:exon:8892;Parent=Msa1433910-mRNA-1 |
| tig0027435 | exon | 40148 | 40207 | 40148 | ID=Msa1433910-mRNA-1:exon:8893;Parent=Msa1433910-mRNA-1 |
| tig0027435 | exon | 45107 | 45277 | 45107 | ID=Msa1433910-mRNA-1:exon:8894;Parent=Msa1433910-mRNA-1 |
| tig0027435 | exon | 45641 | 45853 | 45641 | ID=Msa1433910-mRNA-1:exon:8895;Parent=Msa1433910-mRNA-1 |
| tig0027435 | exon | 46401 | 46950 | 46401 | ID=Msa1433910-mRNA-1:exon:8896;Parent=Msa1433910-mRNA-1 |
| tig0027435 | five_prime_UTR | 39495 | 39654 | 39495 | ID=Msa1433910-mRNA-1:five_prime_utr;Parent=Msa1433910-mRNA-1 |
| tig0027435 | CDS | 39881 | 40048 | 39881 | ID=Msa1433910-mRNA-1:cds;Parent=Msa1433910-mRNA-1 |
| tig0027435 | CDS | 40148 | 40207 | 40148 | ID=Msa1433910-mRNA-1:cds;Parent=Msa1433910-mRNA-1 |
| tig0027435 | CDS | 45107 | 45277 | 45107 | ID=Msa1433910-mRNA-1:cds;Parent=Msa1433910-mRNA-1 |
| tig0027435 | CDS | 45641 | 45853 | 45641 | ID=Msa1433910-mRNA-1:cds;Parent=Msa1433910-mRNA-1 |
| tig0027435 | CDS | 46401 | 46592 | 46401 | ID=Msa1433910-mRNA-1:cds;Parent=Msa1433910-mRNA-1 |
| tig0027435 | three_prime_UTR | 46593 | 46950 | 46593 | ID=Msa1433910-mRNA-1:three_prime_utr;Parent=Msa1433910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
