Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337750 | XP_013465165.1 | 92.281 | 285 | 3 | 1 | 2 | 267 | 3 | 287 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337750 | sp|Q9ZNT7|PHB2_ARATH | 75.524 | 286 | 50 | 2 | 1 | 266 | 1 | 286 | 9.82e-148 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002430 | Msa0337750 | 0.805097 | 1.573849e-49 | -8.615850e-47 |
| Msa0136400 | Msa0337750 | 0.811496 | 6.801349e-51 | -8.615850e-47 |
| Msa0220950 | Msa0337750 | 0.852024 | 6.054849e-61 | -8.615850e-47 |
| Msa0262400 | Msa0337750 | 0.843698 | 1.194284e-58 | -8.615850e-47 |
| Msa0337750 | Msa0383690 | 0.815271 | 1.006828e-51 | -8.615850e-47 |
| Msa0337750 | Msa0943180 | 0.806319 | 8.713049e-50 | -8.615850e-47 |
| Msa0337750 | Msa1257450 | 0.815120 | 1.087754e-51 | -8.615850e-47 |
| Msa0337750 | Msa1332230 | 0.829554 | 4.824267e-55 | -8.615850e-47 |
| Msa0337750 | Msa1344160 | 0.814787 | 1.289689e-51 | -8.615850e-47 |
| Msa0337750 | Msa1344190 | 0.817097 | 3.935492e-52 | -8.615850e-47 |
| Msa0337750 | Msa1433910 | 0.879132 | 1.598493e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337750 | MtrunA17_Chr2g0325011 | 92.254 | 284 | 3 | 1 | 3 | 267 | 1 | 284 | 0.0 | 514 |
| Msa0337750 | MtrunA17_Chr4g0040101 | 78.521 | 284 | 42 | 1 | 3 | 267 | 1 | 284 | 1.13e-158 | 442 |
| Msa0337750 | MtrunA17_Chr8g0356051 | 49.802 | 253 | 105 | 3 | 25 | 255 | 20 | 272 | 7.88e-79 | 239 |
| Msa0337750 | MtrunA17_Chr3g0079011 | 47.500 | 280 | 120 | 5 | 10 | 266 | 3 | 278 | 4.41e-78 | 237 |
| Msa0337750 | MtrunA17_Chr5g0444361 | 29.282 | 181 | 94 | 4 | 3 | 163 | 12 | 178 | 9.66e-19 | 81.3 |
| Msa0337750 | MtrunA17_Chr6g0449171 | 33.333 | 144 | 58 | 1 | 77 | 220 | 2 | 107 | 1.57e-17 | 76.3 |
| Msa0337750 | MtrunA17_Chr5g0444371 | 27.215 | 158 | 75 | 3 | 25 | 163 | 18 | 154 | 1.07e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337750 | AT1G03860.1 | 75.524 | 286 | 50 | 2 | 1 | 266 | 1 | 286 | 9.99e-149 | 417 |
| Msa0337750 | AT1G03860.3 | 75.524 | 286 | 50 | 2 | 1 | 266 | 1 | 286 | 9.99e-149 | 417 |
| Msa0337750 | AT4G28510.1 | 80.000 | 285 | 38 | 1 | 2 | 267 | 3 | 287 | 1.69e-146 | 412 |
| Msa0337750 | AT2G20530.2 | 75.524 | 286 | 50 | 2 | 1 | 267 | 1 | 285 | 3.21e-146 | 411 |
| Msa0337750 | AT2G20530.1 | 75.524 | 286 | 50 | 2 | 1 | 267 | 1 | 285 | 3.21e-146 | 411 |
| Msa0337750 | AT5G44140.1 | 72.662 | 278 | 56 | 2 | 1 | 258 | 1 | 278 | 7.70e-141 | 397 |
| Msa0337750 | AT1G03860.2 | 79.638 | 221 | 26 | 1 | 65 | 266 | 1 | 221 | 1.25e-115 | 331 |
| Msa0337750 | AT3G27280.1 | 47.794 | 272 | 118 | 3 | 15 | 266 | 12 | 279 | 4.82e-79 | 240 |
| Msa0337750 | AT3G27280.2 | 47.794 | 272 | 118 | 3 | 15 | 266 | 12 | 279 | 4.82e-79 | 240 |
| Msa0337750 | AT5G40770.1 | 49.042 | 261 | 113 | 2 | 15 | 255 | 12 | 272 | 1.74e-78 | 239 |
| Msa0337750 | AT5G14300.1 | 46.256 | 227 | 108 | 5 | 33 | 255 | 22 | 238 | 9.44e-61 | 192 |
Find 103 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGACGGCCTTGTTAATT+TGG | 0.098580 | 2_4:+57812872 | Msa0337750:three_prime_UTR |
| CACACTTTACAGGTGAAAAT+TGG | 0.119569 | 2_4:+57811255 | Msa0337750:intron |
| TGCATCAACACTGGCGAAAT+TGG | 0.141061 | 2_4:+57809262 | Msa0337750:CDS |
| AAGAATGAAATGCAGTTAAA+AGG | 0.207619 | 2_4:-57808956 | None:intergenic |
| AACCGTACGGTTCGGGAATT+GGG | 0.234943 | 2_4:-57808883 | None:intergenic |
| CTGGCGAAATTGGGAATTAT+TGG | 0.260992 | 2_4:+57809272 | Msa0337750:CDS |
| AAACCGTACGGTTCGGGAAT+TGG | 0.269799 | 2_4:-57808884 | None:intergenic |
| TGCAACTTGGATCATTCGTT+TGG | 0.285467 | 2_4:-57812914 | None:intergenic |
| TTGGGAATTATTGGTGGAAT+TGG | 0.287106 | 2_4:+57809281 | Msa0337750:CDS |
| CATGACGGCCTTGTTAATTT+GGG | 0.289043 | 2_4:+57812873 | Msa0337750:three_prime_UTR |
| AAATCCAACGAACTTATTTC+AGG | 0.300261 | 2_4:-57812990 | None:intergenic |
| ACAAGAAAACCGTACGGTTC+GGG | 0.362606 | 2_4:-57808890 | None:intergenic |
| GCAAAAGATCACCTGCTTCC+AGG | 0.365181 | 2_4:-57812689 | None:intergenic |
| ATCACAAAATGTGTTCCTTC+AGG | 0.369702 | 2_4:-57809497 | None:intergenic |
| GTCCTTACTCGTCCTTTGCC+TGG | 0.375759 | 2_4:+57811285 | Msa0337750:CDS |
| TTCTTGTGCAGCCACCTGCT+TGG | 0.376184 | 2_4:-57811922 | None:intergenic |
| CCCTCTCAGTCAGAATCTTC+CGG | 0.382058 | 2_4:-57811818 | None:intergenic |
| AGAATGAAATGCAGTTAAAA+GGG | 0.385989 | 2_4:-57808955 | None:intergenic |
| CTACCTCCAGTTATTGAATC+TGG | 0.394577 | 2_4:+57812946 | Msa0337750:three_prime_UTR |
| TCAGGCAGCAAAATTAAATC+AGG | 0.394657 | 2_4:-57812972 | None:intergenic |
| AAAGTTTCATGTATGATTGA+AGG | 0.395524 | 2_4:-57811363 | None:intergenic |
| TAAGTTGGCTGGCATTGTAC+TGG | 0.400052 | 2_4:-57811401 | None:intergenic |
| CTCCTTCATCGCAATCTTCA+AGG | 0.400536 | 2_4:+57808985 | Msa0337750:five_prime_UTR |
| AGGATGCCAGATTCAATAAC+TGG | 0.402800 | 2_4:-57812952 | None:intergenic |
| GCCAGCTACCTACAGTTTAT+CGG | 0.406328 | 2_4:+57811307 | Msa0337750:CDS |
| TACCTTGAAGATTGCGATGA+AGG | 0.416687 | 2_4:-57808987 | None:intergenic |
| AACAAGAAAACCGTACGGTT+CGG | 0.419480 | 2_4:-57808891 | None:intergenic |
| CAATGGCTTGTCCGATCAGT+TGG | 0.421036 | 2_4:-57812578 | None:intergenic |
| TGGAGAGAATTATAATGAAC+GGG | 0.425726 | 2_4:+57811335 | Msa0337750:CDS |
| GCAACTTGGATCATTCGTTT+GGG | 0.426029 | 2_4:-57812913 | None:intergenic |
| ACACTTTACAGGTGAAAATT+GGG | 0.431100 | 2_4:+57811256 | Msa0337750:intron |
| GCATCAACACTGGCGAAATT+GGG | 0.431369 | 2_4:+57809263 | Msa0337750:CDS |
| AACAGTCTTTACAATGTTGA+AGG | 0.452541 | 2_4:+57809320 | Msa0337750:CDS |
| GTATAAAACGATCGATTTGA+AGG | 0.460060 | 2_4:+57812790 | Msa0337750:three_prime_UTR |
| ATGACGGCCTTGTTAATTTG+GGG | 0.466313 | 2_4:+57812874 | Msa0337750:three_prime_UTR |
| TTCCTCAGTGTGATGAAAGC+TGG | 0.472587 | 2_4:-57812609 | None:intergenic |
| TTCATGAATTCTGACCTAGT+TGG | 0.477640 | 2_4:+57812834 | Msa0337750:three_prime_UTR |
| TCAATTACTAGTCTGACCTT+TGG | 0.487774 | 2_4:+57811873 | Msa0337750:CDS |
| TTCAGCAAACAAGGTTTACC+TGG | 0.493035 | 2_4:+57812671 | Msa0337750:CDS |
| TGCTGCAATTGAAGCCAAGC+AGG | 0.493081 | 2_4:+57811908 | Msa0337750:CDS |
| GAATCTTCAGCGGATCAACT+TGG | 0.494004 | 2_4:+57812713 | Msa0337750:CDS |
| CCAAATTAACAAGGCCGTCA+TGG | 0.495219 | 2_4:-57812872 | None:intergenic |
| AAGTGCTGTAATTAGAGCAC+AGG | 0.500292 | 2_4:+57811992 | Msa0337750:CDS |
| GCGAAATTGGGAATTATTGG+TGG | 0.507313 | 2_4:+57809275 | Msa0337750:CDS |
| ATCAAGAGCAATGTTGAAGT+TGG | 0.509611 | 2_4:-57811844 | None:intergenic |
| CCTACGAAGATTCAGTCAAA+AGG | 0.509827 | 2_4:+57808833 | None:intergenic |
| TCCCCAATTCCCGAACCGTA+CGG | 0.511134 | 2_4:+57808881 | Msa0337750:five_prime_UTR |
| TGTGATGAAAGCTGGATTGT+TGG | 0.511259 | 2_4:-57812601 | None:intergenic |
| GCTGCCTGAAATAAGTTCGT+TGG | 0.513237 | 2_4:+57812986 | Msa0337750:three_prime_UTR |
| GTTGATGCAGCGCCACCACT+TGG | 0.517803 | 2_4:-57809248 | None:intergenic |
| CCTACAGTTTATCGGACCCT+TGG | 0.517966 | 2_4:+57811315 | Msa0337750:CDS |
| AGGCTGTTAGTCGTGAAATC+CGG | 0.519390 | 2_4:+57811799 | Msa0337750:intron |
| AATGGCTTGTCCGATCAGTT+GGG | 0.519729 | 2_4:-57812577 | None:intergenic |
| GTTCATTATAATTCTCTCCA+AGG | 0.524825 | 2_4:-57811332 | None:intergenic |
| GGCCAGGCAAAGGACGAGTA+AGG | 0.525565 | 2_4:-57811287 | None:intergenic |
| ATCGTGTTTAACCGTCTCGT+TGG | 0.527718 | 2_4:+57809356 | Msa0337750:CDS |
| GTTGTGTAGGTTTATCCTGA+AGG | 0.531470 | 2_4:+57809482 | Msa0337750:intron |
| TGACGGCCTTGTTAATTTGG+GGG | 0.535142 | 2_4:+57812875 | Msa0337750:three_prime_UTR |
| TATTGCAAATTCAGCAAACA+AGG | 0.537639 | 2_4:+57812662 | Msa0337750:CDS |
| AACAAGGTTTACCTGGAAGC+AGG | 0.540987 | 2_4:+57812678 | Msa0337750:CDS |
| CCTCCCGCTGTGTAATAAGT+TGG | 0.543103 | 2_4:-57811416 | None:intergenic |
| TCCGATAAACTGTAGGTAGC+TGG | 0.544929 | 2_4:-57811308 | None:intergenic |
| TTGTGATTCCGTGGTTTGAG+AGG | 0.547203 | 2_4:+57809513 | Msa0337750:CDS |
| TTGGAGAGAATTATAATGAA+CGG | 0.549347 | 2_4:+57811334 | Msa0337750:CDS |
| CCGCTGTGTAATAAGTTGGC+TGG | 0.549719 | 2_4:-57811412 | None:intergenic |
| GTAGGTAGCTGGCCAGGCAA+AGG | 0.551902 | 2_4:-57811297 | None:intergenic |
| ATCACCGGCCTCTCAAACCA+CGG | 0.552231 | 2_4:-57809521 | None:intergenic |
| AAGTTGGCTGGCATTGTACT+GGG | 0.555741 | 2_4:-57811400 | None:intergenic |
| TTCATTATAATTCTCTCCAA+GGG | 0.556280 | 2_4:-57811331 | None:intergenic |
| TACTAGTCTGACCTTTGGCA+AGG | 0.569845 | 2_4:+57811878 | Msa0337750:CDS |
| GATTCCGTGGTTTGAGAGGC+CGG | 0.570682 | 2_4:+57809517 | Msa0337750:CDS |
| CAGCCAACTTATTACACAGC+GGG | 0.571868 | 2_4:+57811413 | Msa0337750:CDS |
| GGCTGCACAAGAAGCTGAGA+GGG | 0.572538 | 2_4:+57811932 | Msa0337750:CDS |
| TGGTGGCGCTGCATCAACAC+TGG | 0.572841 | 2_4:+57809253 | Msa0337750:CDS |
| GCTAAAAGTGCCCAACTGAT+CGG | 0.574265 | 2_4:+57812567 | Msa0337750:CDS |
| TAAACTGTAGGTAGCTGGCC+AGG | 0.578326 | 2_4:-57811303 | None:intergenic |
| GTTGTCTGTTCATTCCAACT+AGG | 0.578695 | 2_4:-57812848 | None:intergenic |
| TGAGAGGGCTAAATTTGTTG+TGG | 0.593905 | 2_4:+57811947 | Msa0337750:CDS |
| ACCGTACGGTTCGGGAATTG+GGG | 0.596022 | 2_4:-57808882 | None:intergenic |
| CCAAGGGTCCGATAAACTGT+AGG | 0.602094 | 2_4:-57811315 | None:intergenic |
| AACGCGAAAGTTCCAAGTGG+TGG | 0.602185 | 2_4:+57809236 | Msa0337750:CDS |
| TTCTGAACAAGAAAACCGTA+CGG | 0.603333 | 2_4:-57808896 | None:intergenic |
| GAGGAAGATAGAAGCCGCGA+GGG | 0.603991 | 2_4:+57812626 | Msa0337750:CDS |
| CCGGAAGATTCTGACTGAGA+GGG | 0.615174 | 2_4:+57811818 | Msa0337750:CDS |
| TCCGGAAGATTCTGACTGAG+AGG | 0.615920 | 2_4:+57811817 | Msa0337750:CDS |
| TGTCTTTGACACCAACGAGA+CGG | 0.624230 | 2_4:-57809367 | None:intergenic |
| TGCAATTGAAGCCAAGCAGG+TGG | 0.632190 | 2_4:+57811911 | Msa0337750:CDS |
| GAAAGCTGGATTGTTGGCAA+TGG | 0.633552 | 2_4:-57812595 | None:intergenic |
| ACATGAAACTTTGAAAGCTG+TGG | 0.633777 | 2_4:+57811374 | Msa0337750:CDS |
| TGGCTGCACAAGAAGCTGAG+AGG | 0.639141 | 2_4:+57811931 | Msa0337750:CDS |
| GCACGAACATCATAGATCAC+CGG | 0.645792 | 2_4:-57809536 | None:intergenic |
| GACGGTTAAACACGATAGCA+CGG | 0.646783 | 2_4:-57809349 | None:intergenic |
| AGTCTTTACAATGTTGAAGG+AGG | 0.648302 | 2_4:+57809323 | Msa0337750:CDS |
| AGCAGTAAACTCCTTGCCAA+AGG | 0.656274 | 2_4:-57811889 | None:intergenic |
| ATGAACAGACAACTCCATGA+CGG | 0.673190 | 2_4:+57812858 | Msa0337750:three_prime_UTR |
| TCTCGTTGGTGTCAAAGACA+AGG | 0.674892 | 2_4:+57809370 | Msa0337750:CDS |
| CCAACTTATTACACAGCGGG+AGG | 0.682391 | 2_4:+57811416 | Msa0337750:CDS |
| ATGCCAGATTCAATAACTGG+AGG | 0.687656 | 2_4:-57812949 | None:intergenic |
| TGAGGAAGATAGAAGCCGCG+AGG | 0.696862 | 2_4:+57812625 | Msa0337750:CDS |
| AACATGTGCTATCTCCCTCG+CGG | 0.711001 | 2_4:-57812640 | None:intergenic |
| AAGAACGCGAAAGTTCCAAG+TGG | 0.742151 | 2_4:+57809233 | Msa0337750:CDS |
| ATCCAGCTTTCATCACACTG+AGG | 0.780168 | 2_4:+57812607 | Msa0337750:CDS |
| CCAGCCAACTTATTACACAG+CGG | 0.790079 | 2_4:+57811412 | Msa0337750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACATTTCTAAATTTAAA+GGG | - | chr2_4:57810369-57810388 | None:intergenic | 10.0% |
| !! | ATAAACATTTCTAAATTTAA+AGG | - | chr2_4:57810370-57810389 | None:intergenic | 10.0% |
| !!! | AGTTTTAATTAATAATTCAT+AGG | + | chr2_4:57811117-57811136 | Msa0337750:intron | 10.0% |
| !!! | GAAGATTTTTTTTTTGAATA+GGG | - | chr2_4:57808930-57808949 | None:intergenic | 15.0% |
| !!! | TGAAGATTTTTTTTTTGAAT+AGG | - | chr2_4:57808931-57808950 | None:intergenic | 15.0% |
| !!! | AAAATGAAAATTGATTTCTA+AGG | - | chr2_4:57809051-57809070 | None:intergenic | 15.0% |
| !!! | TTTATTTTATCTTTAGCTAT+AGG | - | chr2_4:57809704-57809723 | None:intergenic | 15.0% |
| !!! | AATTGTATTCAGATTTTAAA+AGG | + | chr2_4:57810166-57810185 | Msa0337750:intron | 15.0% |
| !! | ATATAAGCTATTTATAAAAC+TGG | - | chr2_4:57810294-57810313 | None:intergenic | 15.0% |
| !! | GAATATGATATATCAAAAAT+GGG | - | chr2_4:57810480-57810499 | None:intergenic | 15.0% |
| !! | TGAATATGATATATCAAAAA+TGG | - | chr2_4:57810481-57810500 | None:intergenic | 15.0% |
| !! | TTTGATATATCATATTCAAA+TGG | + | chr2_4:57810483-57810502 | Msa0337750:intron | 15.0% |
| !! | GTTAAATGTTTCTTATAAAT+AGG | - | chr2_4:57810666-57810685 | None:intergenic | 15.0% |
| !!! | ATTATGTCTTCTAATATTTT+TGG | + | chr2_4:57811080-57811099 | Msa0337750:intron | 15.0% |
| !!! | TTCATTTTCGTTTTTGTTTA+GGG | + | chr2_4:57809102-57809121 | Msa0337750:intron | 20.0% |
| !!! | TTTTGTGAATTGAAATGATA+TGG | + | chr2_4:57809448-57809467 | Msa0337750:intron | 20.0% |
| !! | TTTGTGAATTGAAATGATAT+GGG | + | chr2_4:57809449-57809468 | Msa0337750:intron | 20.0% |
| !! | AAACATAATGAAACATATAG+AGG | - | chr2_4:57810106-57810125 | None:intergenic | 20.0% |
| !! | ATTCATGAAAATTATATCAC+TGG | - | chr2_4:57810131-57810150 | None:intergenic | 20.0% |
| !!! | CGTTTTTACAAAGTTTATAT+TGG | + | chr2_4:57810241-57810260 | Msa0337750:intron | 20.0% |
| !! | GAGAAAAATCTAAATACTAA+CGG | - | chr2_4:57810559-57810578 | None:intergenic | 20.0% |
| !! | ATGTTTCTTATAAATAGGAA+AGG | - | chr2_4:57810661-57810680 | None:intergenic | 20.0% |
| !!! | GTCAACTTTTTCTTATAAAT+AGG | + | chr2_4:57810765-57810784 | Msa0337750:intron | 20.0% |
| !!! | TGATTTGAAATAGTTCTTAA+GGG | - | chr2_4:57810847-57810866 | None:intergenic | 20.0% |
| !! | AAATAATCTAACATAATGAC+AGG | - | chr2_4:57811527-57811546 | None:intergenic | 20.0% |
| !! | ATTTACACATAATACTTTCA+AGG | - | chr2_4:57811601-57811620 | None:intergenic | 20.0% |
| !! | ACATCCTACAATTTATTTAT+TGG | + | chr2_4:57811664-57811683 | Msa0337750:intron | 20.0% |
| !! | CAAACCAATAAATAAATTGT+AGG | - | chr2_4:57811671-57811690 | None:intergenic | 20.0% |
| !! | TTAATAGATCTATTCTTTGT+AGG | + | chr2_4:57811779-57811798 | Msa0337750:intron | 20.0% |
| !!! | ATTTTCATGTAGAATACATT+CGG | + | chr2_4:57812084-57812103 | Msa0337750:intron | 20.0% |
| !!! | TGGATTTTTATATTTTTCTC+AGG | + | chr2_4:57813006-57813025 | Msa0337750:three_prime_UTR | 20.0% |
| !!! | GGATTTTTATATTTTTCTCA+GGG | + | chr2_4:57813007-57813026 | Msa0337750:three_prime_UTR | 20.0% |
| !!! | TGCTAAAAGTTTTTGTTTAT+CGG | + | chr2_4:57813065-57813084 | Msa0337750:three_prime_UTR | 20.0% |
| !! | AAGCTAATGAGGATTTTATT+GGG | - | chr2_4:57808859-57808878 | None:intergenic | 25.0% |
| !! | AAAGCTAATGAGGATTTTAT+TGG | - | chr2_4:57808860-57808879 | None:intergenic | 25.0% |
| ! | AGAATGAAATGCAGTTAAAA+GGG | - | chr2_4:57808958-57808977 | None:intergenic | 25.0% |
| ! | AAGAATGAAATGCAGTTAAA+AGG | - | chr2_4:57808959-57808978 | None:intergenic | 25.0% |
| !! | AGAAAATTGAAGTAATGGAA+AGG | - | chr2_4:57809020-57809039 | None:intergenic | 25.0% |
| !!! | TGAAAATTGATTTCTAAGGT+GGG | - | chr2_4:57809047-57809066 | None:intergenic | 25.0% |
| !! | ATGAAAATTGATTTCTAAGG+TGG | - | chr2_4:57809048-57809067 | None:intergenic | 25.0% |
| !!! | GTTCATTTTCGTTTTTGTTT+AGG | + | chr2_4:57809101-57809120 | Msa0337750:intron | 25.0% |
| !!! | AAAGACAAGGTCATTTTTTA+GGG | + | chr2_4:57809383-57809402 | Msa0337750:intron | 25.0% |
| ! | CTTGATTTCGTTGAATTTAT+CGG | + | chr2_4:57809425-57809444 | Msa0337750:intron | 25.0% |
| ! | CTTATGTATAAGTTTGCATA+AGG | + | chr2_4:57809674-57809693 | Msa0337750:intron | 25.0% |
| !! | TTATTTTCATAAGTTCTCCA+AGG | - | chr2_4:57809771-57809790 | None:intergenic | 25.0% |
| ! | TGAAAAAAGCTTATGCAAAA+TGG | + | chr2_4:57809793-57809812 | Msa0337750:intron | 25.0% |
| ! | TCTAAATAAAACTGGATTTC+AGG | - | chr2_4:57809907-57809926 | None:intergenic | 25.0% |
| !! | ATACATAATGATTTTCAGAC+AGG | - | chr2_4:57810019-57810038 | None:intergenic | 25.0% |
| ! | TATCATATTCAAATGGTGTA+AGG | + | chr2_4:57810490-57810509 | Msa0337750:intron | 25.0% |
| ! | TTCTTATAAATAGGAAAGGA+GGG | - | chr2_4:57810657-57810676 | None:intergenic | 25.0% |
| ! | TTTCTTATAAATAGGAAAGG+AGG | - | chr2_4:57810658-57810677 | None:intergenic | 25.0% |
| ! | CATTGCATAAATGATGTATT+TGG | + | chr2_4:57810696-57810715 | Msa0337750:intron | 25.0% |
| !! | CTTTTTCTTATAAATAGGAC+CGG | + | chr2_4:57810770-57810789 | Msa0337750:intron | 25.0% |
| !! | GATTTGAAATAGTTCTTAAG+GGG | - | chr2_4:57810846-57810865 | None:intergenic | 25.0% |
| !! | CTGATTTGAAATAGTTCTTA+AGG | - | chr2_4:57810848-57810867 | None:intergenic | 25.0% |
| !!! | ATATTTTTGGATGTCAATGT+TGG | + | chr2_4:57811093-57811112 | Msa0337750:intron | 25.0% |
| ! | AATCTATAAACTTGAAGTAC+TGG | - | chr2_4:57811176-57811195 | None:intergenic | 25.0% |
| ! | TTCATTATAATTCTCTCCAA+GGG | - | chr2_4:57811334-57811353 | None:intergenic | 25.0% |
| ! | TTGGAGAGAATTATAATGAA+CGG | + | chr2_4:57811334-57811353 | Msa0337750:CDS | 25.0% |
| ! | AAAGTTTCATGTATGATTGA+AGG | - | chr2_4:57811366-57811385 | None:intergenic | 25.0% |
| ! | TTCATAAAACATATGCTACT+GGG | - | chr2_4:57811635-57811654 | None:intergenic | 25.0% |
| ! | TTTCATAAAACATATGCTAC+TGG | - | chr2_4:57811636-57811655 | None:intergenic | 25.0% |
| !! | TGGTTTGAATTCATTTTAAG+TGG | + | chr2_4:57811684-57811703 | Msa0337750:intron | 25.0% |
| !!! | GGTTTGAATTCATTTTAAGT+GGG | + | chr2_4:57811685-57811704 | Msa0337750:intron | 25.0% |
| !!! | TCTTTTGTTTCCTTAAACAA+TGG | - | chr2_4:57812288-57812307 | None:intergenic | 25.0% |
| ! | TTTCTTAAACAATGACCTTA+GGG | + | chr2_4:57812386-57812405 | Msa0337750:intron | 25.0% |
| ! | TATTGATCAACATTGAATGT+TGG | + | chr2_4:57812480-57812499 | Msa0337750:intron | 25.0% |
| GAGAGAGAAAATTGAAGTAA+TGG | - | chr2_4:57809025-57809044 | None:intergenic | 30.0% | |
| AACAGTCTTTACAATGTTGA+AGG | + | chr2_4:57809320-57809339 | Msa0337750:CDS | 30.0% | |
| !!! | CAAAGACAAGGTCATTTTTT+AGG | + | chr2_4:57809382-57809401 | Msa0337750:intron | 30.0% |
| !!! | AAGGTCATTTTTTAGGGTTT+AGG | + | chr2_4:57809389-57809408 | Msa0337750:intron | 30.0% |
| !!! | AGGTCATTTTTTAGGGTTTA+GGG | + | chr2_4:57809390-57809409 | Msa0337750:intron | 30.0% |
| ATAAGTTGTTCATCCAAACA+GGG | - | chr2_4:57809617-57809636 | None:intergenic | 30.0% | |
| AATAAGTTGTTCATCCAAAC+AGG | - | chr2_4:57809618-57809637 | None:intergenic | 30.0% | |
| CATGCAAGTCTAAATAAAAC+TGG | - | chr2_4:57809915-57809934 | None:intergenic | 30.0% | |
| ATACCATCACAAAGAATAGA+GGG | - | chr2_4:57809995-57810014 | None:intergenic | 30.0% | |
| TATACCATCACAAAGAATAG+AGG | - | chr2_4:57809996-57810015 | None:intergenic | 30.0% | |
| AGTATGAATGATGCACATAA+CGG | - | chr2_4:57810046-57810065 | None:intergenic | 30.0% | |
| ACATTACTTTGTTAACTAGG+GGG | - | chr2_4:57810076-57810095 | None:intergenic | 30.0% | |
| GACATTACTTTGTTAACTAG+GGG | - | chr2_4:57810077-57810096 | None:intergenic | 30.0% | |
| GGACATTACTTTGTTAACTA+GGG | - | chr2_4:57810078-57810097 | None:intergenic | 30.0% | |
| AGGACATTACTTTGTTAACT+AGG | - | chr2_4:57810079-57810098 | None:intergenic | 30.0% | |
| ATGAAACATATAGAGGATTG+AGG | - | chr2_4:57810099-57810118 | None:intergenic | 30.0% | |
| !!! | TTCCACATGAATTTGTTTTG+AGG | + | chr2_4:57810200-57810219 | Msa0337750:intron | 30.0% |
| ATTGGAGTTTACCTTTGTTA+AGG | + | chr2_4:57810259-57810278 | Msa0337750:intron | 30.0% | |
| AGCTATTTATAAAACTGGAG+AGG | - | chr2_4:57810289-57810308 | None:intergenic | 30.0% | |
| ! | TCAACAATGATTTTGCAATC+AGG | - | chr2_4:57810409-57810428 | None:intergenic | 30.0% |
| CATTGAGTAACTAATGTACT+TGG | - | chr2_4:57810735-57810754 | None:intergenic | 30.0% | |
| TTCAGAGGCTAAACATAAAA+GGG | - | chr2_4:57810988-57811007 | None:intergenic | 30.0% | |
| ATTCAGAGGCTAAACATAAA+AGG | - | chr2_4:57810989-57811008 | None:intergenic | 30.0% | |
| !! | AAACTTGAAGTACTGGAAAT+TGG | - | chr2_4:57811169-57811188 | None:intergenic | 30.0% |
| ACACTTTACAGGTGAAAATT+GGG | + | chr2_4:57811256-57811275 | Msa0337750:intron | 30.0% | |
| GTTCATTATAATTCTCTCCA+AGG | - | chr2_4:57811335-57811354 | None:intergenic | 30.0% | |
| TGGAGAGAATTATAATGAAC+GGG | + | chr2_4:57811335-57811354 | Msa0337750:CDS | 30.0% | |
| !! | ATTTTTCAAACCATGTTGCT+TGG | + | chr2_4:57811479-57811498 | Msa0337750:intron | 30.0% |
| !! | TTTTTCAAACCATGTTGCTT+GGG | + | chr2_4:57811480-57811499 | Msa0337750:intron | 30.0% |
| AGTAACTGCATAAGAATTCA+CGG | - | chr2_4:57812028-57812047 | None:intergenic | 30.0% | |
| AAACAACAAAAACATGTACC+AGG | - | chr2_4:57812060-57812079 | None:intergenic | 30.0% | |
| AAATCTGGTTGTGTTTAATG+TGG | + | chr2_4:57812225-57812244 | Msa0337750:intron | 30.0% | |
| AATCTGGTTGTGTTTAATGT+GGG | + | chr2_4:57812226-57812245 | Msa0337750:intron | 30.0% | |
| GTCATTGTTTAAGAAACTCA+AGG | - | chr2_4:57812382-57812401 | None:intergenic | 30.0% | |
| GTTTCTTAAACAATGACCTT+AGG | + | chr2_4:57812385-57812404 | Msa0337750:intron | 30.0% | |
| AATTGACTGAGATGTAAAAC+TGG | - | chr2_4:57812461-57812480 | None:intergenic | 30.0% | |
| TTGATGTGTAAAAAAGGTCA+GGG | - | chr2_4:57812538-57812557 | None:intergenic | 30.0% | |
| !!! | ACCTTTTTTACACATCAACA+GGG | + | chr2_4:57812540-57812559 | Msa0337750:intron | 30.0% |
| TATTGCAAATTCAGCAAACA+AGG | + | chr2_4:57812662-57812681 | Msa0337750:CDS | 30.0% | |
| !! | GTATAAAACGATCGATTTGA+AGG | + | chr2_4:57812790-57812809 | Msa0337750:three_prime_UTR | 30.0% |
| ! | GTAGTTCATTTTATGCAACT+TGG | - | chr2_4:57812930-57812949 | None:intergenic | 30.0% |
| AAATCCAACGAACTTATTTC+AGG | - | chr2_4:57812993-57813012 | None:intergenic | 30.0% | |
| AATTGGGGAAAAAGCTAATG+AGG | - | chr2_4:57808870-57808889 | None:intergenic | 35.0% | |
| TTCTGAACAAGAAAACCGTA+CGG | - | chr2_4:57808899-57808918 | None:intergenic | 35.0% | |
| TTGGGAATTATTGGTGGAAT+TGG | + | chr2_4:57809281-57809300 | Msa0337750:CDS | 35.0% | |
| AGTCTTTACAATGTTGAAGG+AGG | + | chr2_4:57809323-57809342 | Msa0337750:CDS | 35.0% | |
| !!! | GGTCATTTTTTAGGGTTTAG+GGG | + | chr2_4:57809391-57809410 | Msa0337750:intron | 35.0% |
| ATCACAAAATGTGTTCCTTC+AGG | - | chr2_4:57809500-57809519 | None:intergenic | 35.0% | |
| !! | ATTTGGTTGAGAGTACTTCT+GGG | + | chr2_4:57809567-57809586 | Msa0337750:intron | 35.0% |
| TTGAGCTAATCTCTTGACAT+AGG | - | chr2_4:57809861-57809880 | None:intergenic | 35.0% | |
| TAGACTTGCATGTCATCATT+AGG | + | chr2_4:57809923-57809942 | Msa0337750:intron | 35.0% | |
| TTTCCCTCTATTCTTTGTGA+TGG | + | chr2_4:57809989-57810008 | Msa0337750:intron | 35.0% | |
| GTTATGTGCATCATTCATAC+TGG | + | chr2_4:57810045-57810064 | Msa0337750:intron | 35.0% | |
| CATTACTTTGTTAACTAGGG+GGG | - | chr2_4:57810075-57810094 | None:intergenic | 35.0% | |
| CTCCTCAAAACAAATTCATG+TGG | - | chr2_4:57810205-57810224 | None:intergenic | 35.0% | |
| ! | GAAGTATTTGAACAACTGCT+AGG | + | chr2_4:57810427-57810446 | Msa0337750:intron | 35.0% |
| ACATTTCAATCTTGTGATCC+TGG | + | chr2_4:57810590-57810609 | Msa0337750:intron | 35.0% | |
| TATAGTTAAGTCCAAATGCC+AGG | - | chr2_4:57810611-57810630 | None:intergenic | 35.0% | |
| AGGGAGTAGACAATAATCAT+CGG | - | chr2_4:57810638-57810657 | None:intergenic | 35.0% | |
| TTTCTTATAAATAGGACCGG+AGG | + | chr2_4:57810773-57810792 | Msa0337750:intron | 35.0% | |
| TTCTTATAAATAGGACCGGA+GGG | + | chr2_4:57810774-57810793 | Msa0337750:intron | 35.0% | |
| CAACAATTAAATACTCCCTC+CGG | - | chr2_4:57810792-57810811 | None:intergenic | 35.0% | |
| TTAAATCACCACACAGACAA+CGG | - | chr2_4:57810899-57810918 | None:intergenic | 35.0% | |
| GTCTGTGTGGTGATTTAAAA+TGG | + | chr2_4:57810901-57810920 | Msa0337750:intron | 35.0% | |
| ! | TTTTGATGCCGTTAAACATC+TGG | + | chr2_4:57810938-57810957 | Msa0337750:intron | 35.0% |
| AAAGGGAAATTCAGACTACA+AGG | - | chr2_4:57810971-57810990 | None:intergenic | 35.0% | |
| AGAGTATGATGCAAATTCAG+AGG | - | chr2_4:57811003-57811022 | None:intergenic | 35.0% | |
| TCATAGGTAGCAAAGATGTT+TGG | + | chr2_4:57811133-57811152 | Msa0337750:intron | 35.0% | |
| CACACTTTACAGGTGAAAAT+TGG | + | chr2_4:57811255-57811274 | Msa0337750:intron | 35.0% | |
| ! | ACATGAAACTTTGAAAGCTG+TGG | + | chr2_4:57811374-57811393 | Msa0337750:CDS | 35.0% |
| ATCAAGAGCAATGTTGAAGT+TGG | - | chr2_4:57811847-57811866 | None:intergenic | 35.0% | |
| ! | TCAATTACTAGTCTGACCTT+TGG | + | chr2_4:57811873-57811892 | Msa0337750:CDS | 35.0% |
| !!! | ATAAGACAGTGCTAGTTTTG+GGG | - | chr2_4:57812138-57812157 | None:intergenic | 35.0% |
| !!! | GATAAGACAGTGCTAGTTTT+GGG | - | chr2_4:57812139-57812158 | None:intergenic | 35.0% |
| !! | AGATAAGACAGTGCTAGTTT+TGG | - | chr2_4:57812140-57812159 | None:intergenic | 35.0% |
| TGTTCTCTTGATCATGATGT+TGG | + | chr2_4:57812163-57812182 | Msa0337750:intron | 35.0% | |
| CATGATGTTGGATACATCTT+TGG | + | chr2_4:57812175-57812194 | Msa0337750:intron | 35.0% | |
| ACTGTCTTTGTTCACAAATC+TGG | + | chr2_4:57812210-57812229 | Msa0337750:intron | 35.0% | |
| AAATACTAACAAGTGCCCTT+AGG | + | chr2_4:57812262-57812281 | Msa0337750:intron | 35.0% | |
| TTCCTTAAACAATGGCCTAA+GGG | - | chr2_4:57812280-57812299 | None:intergenic | 35.0% | |
| TTTCCTTAAACAATGGCCTA+AGG | - | chr2_4:57812281-57812300 | None:intergenic | 35.0% | |
| AACTCAAGGAAACTTTGTCT+AGG | - | chr2_4:57812368-57812387 | None:intergenic | 35.0% | |
| TGATGTGTAAAAAAGGTCAG+GGG | - | chr2_4:57812537-57812556 | None:intergenic | 35.0% | |
| GTTGATGTGTAAAAAAGGTC+AGG | - | chr2_4:57812539-57812558 | None:intergenic | 35.0% | |
| !!! | GACCTTTTTTACACATCAAC+AGG | + | chr2_4:57812539-57812558 | Msa0337750:intron | 35.0% |
| ACCCTGTTGATGTGTAAAAA+AGG | - | chr2_4:57812544-57812563 | None:intergenic | 35.0% | |
| ! | ATCTTTTGCTGAATCTTCAG+CGG | + | chr2_4:57812703-57812722 | Msa0337750:CDS | 35.0% |
| !!! | TAACCAGCTCATTTTTTGCT+AGG | - | chr2_4:57812741-57812760 | None:intergenic | 35.0% |
| TTCATGAATTCTGACCTAGT+TGG | + | chr2_4:57812834-57812853 | Msa0337750:three_prime_UTR | 35.0% | |
| TCAGGCAGCAAAATTAAATC+AGG | - | chr2_4:57812975-57812994 | None:intergenic | 35.0% | |
| AACAAGAAAACCGTACGGTT+CGG | - | chr2_4:57808894-57808913 | None:intergenic | 40.0% | |
| TACCTTGAAGATTGCGATGA+AGG | - | chr2_4:57808990-57809009 | None:intergenic | 40.0% | |
| CTGGCGAAATTGGGAATTAT+TGG | + | chr2_4:57809272-57809291 | Msa0337750:CDS | 40.0% | |
| GCGAAATTGGGAATTATTGG+TGG | + | chr2_4:57809275-57809294 | Msa0337750:CDS | 40.0% | |
| GTTGTGTAGGTTTATCCTGA+AGG | + | chr2_4:57809482-57809501 | Msa0337750:intron | 40.0% | |
| ! | GAACACATTTTGTGATTCCG+TGG | + | chr2_4:57809504-57809523 | Msa0337750:CDS | 40.0% |
| ! | GAAGTACTCTCAACCAAATG+AGG | - | chr2_4:57809566-57809585 | None:intergenic | 40.0% |
| !! | CATTTGGTTGAGAGTACTTC+TGG | + | chr2_4:57809566-57809585 | Msa0337750:intron | 40.0% |
| !! | GCTGTTTTCATAAGCTACCT+TGG | + | chr2_4:57809751-57809770 | Msa0337750:intron | 40.0% |
| ! | CTCTTGACATAGGTATTGTG+AGG | - | chr2_4:57809851-57809870 | None:intergenic | 40.0% |
| GATTTCAGGCATGTTTGGAT+TGG | - | chr2_4:57809893-57809912 | None:intergenic | 40.0% | |
| AACTGGATTTCAGGCATGTT+TGG | - | chr2_4:57809898-57809917 | None:intergenic | 40.0% | |
| GTATTTGAACAACTGCTAGG+TGG | + | chr2_4:57810430-57810449 | Msa0337750:intron | 40.0% | |
| AATCTTGTGATCCTGGCATT+TGG | + | chr2_4:57810597-57810616 | Msa0337750:intron | 40.0% | |
| GCCAATCACCAGATGTTTAA+CGG | - | chr2_4:57810949-57810968 | None:intergenic | 40.0% | |
| TCAAACAACCCTGTGAAAGT+GGG | - | chr2_4:57811054-57811073 | None:intergenic | 40.0% | |
| ATCAAACAACCCTGTGAAAG+TGG | - | chr2_4:57811055-57811074 | None:intergenic | 40.0% | |
| ACCTGTAAAGTGTGTACATG+CGG | - | chr2_4:57811249-57811268 | None:intergenic | 40.0% | |
| !! | TGAGAGGGCTAAATTTGTTG+TGG | + | chr2_4:57811947-57811966 | Msa0337750:CDS | 40.0% |
| ! | AAGTGCTGTAATTAGAGCAC+AGG | + | chr2_4:57811992-57812011 | Msa0337750:CDS | 40.0% |
| TTCTTATGCAGTTACTGCTG+TGG | + | chr2_4:57812032-57812051 | Msa0337750:intron | 40.0% | |
| ATGTGTAAAAAAGGTCAGGG+GGG | - | chr2_4:57812535-57812554 | None:intergenic | 40.0% | |
| GATGTGTAAAAAAGGTCAGG+GGG | - | chr2_4:57812536-57812555 | None:intergenic | 40.0% | |
| ! | TTTTACACATCAACAGGGTG+AGG | + | chr2_4:57812545-57812564 | Msa0337750:intron | 40.0% |
| TGTGATGAAAGCTGGATTGT+TGG | - | chr2_4:57812604-57812623 | None:intergenic | 40.0% | |
| TTCAGCAAACAAGGTTTACC+TGG | + | chr2_4:57812671-57812690 | Msa0337750:CDS | 40.0% | |
| GATCCTAGCAAAAAATGAGC+TGG | + | chr2_4:57812735-57812754 | Msa0337750:exon | 40.0% | |
| GTTGTCTGTTCATTCCAACT+AGG | - | chr2_4:57812851-57812870 | None:intergenic | 40.0% | |
| ATGAACAGACAACTCCATGA+CGG | + | chr2_4:57812858-57812877 | Msa0337750:three_prime_UTR | 40.0% | |
| !! | CATGACGGCCTTGTTAATTT+GGG | + | chr2_4:57812873-57812892 | Msa0337750:three_prime_UTR | 40.0% |
| !! | ATGACGGCCTTGTTAATTTG+GGG | + | chr2_4:57812874-57812893 | Msa0337750:three_prime_UTR | 40.0% |
| GCAACTTGGATCATTCGTTT+GGG | - | chr2_4:57812916-57812935 | None:intergenic | 40.0% | |
| TGCAACTTGGATCATTCGTT+TGG | - | chr2_4:57812917-57812936 | None:intergenic | 40.0% | |
| CTACCTCCAGTTATTGAATC+TGG | + | chr2_4:57812946-57812965 | Msa0337750:three_prime_UTR | 40.0% | |
| ATGCCAGATTCAATAACTGG+AGG | - | chr2_4:57812952-57812971 | None:intergenic | 40.0% | |
| AGGATGCCAGATTCAATAAC+TGG | - | chr2_4:57812955-57812974 | None:intergenic | 40.0% | |
| ACAAGAAAACCGTACGGTTC+GGG | - | chr2_4:57808893-57808912 | None:intergenic | 45.0% | |
| CTCCTTCATCGCAATCTTCA+AGG | + | chr2_4:57808985-57809004 | Msa0337750:five_prime_UTR | 45.0% | |
| AAGAACGCGAAAGTTCCAAG+TGG | + | chr2_4:57809233-57809252 | Msa0337750:CDS | 45.0% | |
| TGCATCAACACTGGCGAAAT+TGG | + | chr2_4:57809262-57809281 | Msa0337750:CDS | 45.0% | |
| GCATCAACACTGGCGAAATT+GGG | + | chr2_4:57809263-57809282 | Msa0337750:CDS | 45.0% | |
| GACGGTTAAACACGATAGCA+CGG | - | chr2_4:57809352-57809371 | None:intergenic | 45.0% | |
| ATCGTGTTTAACCGTCTCGT+TGG | + | chr2_4:57809356-57809375 | Msa0337750:CDS | 45.0% | |
| TGTCTTTGACACCAACGAGA+CGG | - | chr2_4:57809370-57809389 | None:intergenic | 45.0% | |
| !! | TCTCGTTGGTGTCAAAGACA+AGG | + | chr2_4:57809370-57809389 | Msa0337750:CDS | 45.0% |
| !! | GGGTGTGTTGTTTGTTGTGT+AGG | + | chr2_4:57809469-57809488 | Msa0337750:intron | 45.0% |
| TTGTGATTCCGTGGTTTGAG+AGG | + | chr2_4:57809513-57809532 | Msa0337750:CDS | 45.0% | |
| GCACGAACATCATAGATCAC+CGG | - | chr2_4:57809539-57809558 | None:intergenic | 45.0% | |
| TACTTTGTTAACTAGGGGGG+TGG | - | chr2_4:57810072-57810091 | None:intergenic | 45.0% | |
| GGAGAGGCAATCCTTAACAA+AGG | - | chr2_4:57810273-57810292 | None:intergenic | 45.0% | |
| GATCATTTCCGTTGTCTGTG+TGG | + | chr2_4:57810888-57810907 | Msa0337750:intron | 45.0% | |
| GCCGTTAAACATCTGGTGAT+TGG | + | chr2_4:57810945-57810964 | Msa0337750:intron | 45.0% | |
| TCCTTTCTCCCACTTTCACA+GGG | + | chr2_4:57811043-57811062 | Msa0337750:intron | 45.0% | |
| ACCGCATGTACACACTTTAC+AGG | + | chr2_4:57811245-57811264 | Msa0337750:intron | 45.0% | |
| GCCAGCTACCTACAGTTTAT+CGG | + | chr2_4:57811307-57811326 | Msa0337750:CDS | 45.0% | |
| TCCGATAAACTGTAGGTAGC+TGG | - | chr2_4:57811311-57811330 | None:intergenic | 45.0% | |
| AAGTTGGCTGGCATTGTACT+GGG | - | chr2_4:57811403-57811422 | None:intergenic | 45.0% | |
| ! | TAAGTTGGCTGGCATTGTAC+TGG | - | chr2_4:57811404-57811423 | None:intergenic | 45.0% |
| CCAGCCAACTTATTACACAG+CGG | + | chr2_4:57811412-57811431 | Msa0337750:CDS | 45.0% | |
| CAGCCAACTTATTACACAGC+GGG | + | chr2_4:57811413-57811432 | Msa0337750:CDS | 45.0% | |
| AGGCTGTTAGTCGTGAAATC+CGG | + | chr2_4:57811799-57811818 | Msa0337750:intron | 45.0% | |
| ! | TACTAGTCTGACCTTTGGCA+AGG | + | chr2_4:57811878-57811897 | Msa0337750:CDS | 45.0% |
| AGCAGTAAACTCCTTGCCAA+AGG | - | chr2_4:57811892-57811911 | None:intergenic | 45.0% | |
| TGCCCTTAGGCCATTGTTTA+AGG | + | chr2_4:57812275-57812294 | Msa0337750:intron | 45.0% | |
| AACACGTCATGCTAACCCTA+AGG | - | chr2_4:57812404-57812423 | None:intergenic | 45.0% | |
| !! | GCTAAAAGTGCCCAACTGAT+CGG | + | chr2_4:57812567-57812586 | Msa0337750:CDS | 45.0% |
| ! | AATGGCTTGTCCGATCAGTT+GGG | - | chr2_4:57812580-57812599 | None:intergenic | 45.0% |
| GAAAGCTGGATTGTTGGCAA+TGG | - | chr2_4:57812598-57812617 | None:intergenic | 45.0% | |
| ATCCAGCTTTCATCACACTG+AGG | + | chr2_4:57812607-57812626 | Msa0337750:CDS | 45.0% | |
| TTCCTCAGTGTGATGAAAGC+TGG | - | chr2_4:57812612-57812631 | None:intergenic | 45.0% | |
| AACAAGGTTTACCTGGAAGC+AGG | + | chr2_4:57812678-57812697 | Msa0337750:CDS | 45.0% | |
| GAATCTTCAGCGGATCAACT+TGG | + | chr2_4:57812713-57812732 | Msa0337750:CDS | 45.0% | |
| CCAAATTAACAAGGCCGTCA+TGG | - | chr2_4:57812875-57812894 | None:intergenic | 45.0% | |
| !! | CCATGACGGCCTTGTTAATT+TGG | + | chr2_4:57812872-57812891 | Msa0337750:three_prime_UTR | 45.0% |
| !! | TGACGGCCTTGTTAATTTGG+GGG | + | chr2_4:57812875-57812894 | Msa0337750:three_prime_UTR | 45.0% |
| ATCCCTCCCCCAAATTAACA+AGG | - | chr2_4:57812884-57812903 | None:intergenic | 45.0% | |
| GCTGCCTGAAATAAGTTCGT+TGG | + | chr2_4:57812986-57813005 | Msa0337750:three_prime_UTR | 45.0% | |
| ! | AACCGTACGGTTCGGGAATT+GGG | - | chr2_4:57808886-57808905 | None:intergenic | 50.0% |
| ! | AAACCGTACGGTTCGGGAAT+TGG | - | chr2_4:57808887-57808906 | None:intergenic | 50.0% |
| AACGCGAAAGTTCCAAGTGG+TGG | + | chr2_4:57809236-57809255 | Msa0337750:CDS | 50.0% | |
| TGTTCGTGCACGTCCTCATT+TGG | + | chr2_4:57809550-57809569 | Msa0337750:intron | 50.0% | |
| GCAGATGGTAAGTCCCTGTT+TGG | + | chr2_4:57809601-57809620 | Msa0337750:intron | 50.0% | |
| GTCCTTTCTCCCACTTTCAC+AGG | + | chr2_4:57811042-57811061 | Msa0337750:intron | 50.0% | |
| ACCCTGTGAAAGTGGGAGAA+AGG | - | chr2_4:57811047-57811066 | None:intergenic | 50.0% | |
| TAAACTGTAGGTAGCTGGCC+AGG | - | chr2_4:57811306-57811325 | None:intergenic | 50.0% | |
| CCAAGGGTCCGATAAACTGT+AGG | - | chr2_4:57811318-57811337 | None:intergenic | 50.0% | |
| CCTACAGTTTATCGGACCCT+TGG | + | chr2_4:57811315-57811334 | Msa0337750:CDS | 50.0% | |
| ! | CCGCTGTGTAATAAGTTGGC+TGG | - | chr2_4:57811415-57811434 | None:intergenic | 50.0% |
| CCTCCCGCTGTGTAATAAGT+TGG | - | chr2_4:57811419-57811438 | None:intergenic | 50.0% | |
| CCAACTTATTACACAGCGGG+AGG | + | chr2_4:57811416-57811435 | Msa0337750:CDS | 50.0% | |
| ! | CAAACCATGTTGCTTGGGTG+AGG | + | chr2_4:57811485-57811504 | Msa0337750:intron | 50.0% |
| GATACCTCACCCAAGCAACA+TGG | - | chr2_4:57811492-57811511 | None:intergenic | 50.0% | |
| TCCGGAAGATTCTGACTGAG+AGG | + | chr2_4:57811817-57811836 | Msa0337750:CDS | 50.0% | |
| CCCTCTCAGTCAGAATCTTC+CGG | - | chr2_4:57811821-57811840 | None:intergenic | 50.0% | |
| CCGGAAGATTCTGACTGAGA+GGG | + | chr2_4:57811818-57811837 | Msa0337750:CDS | 50.0% | |
| TGCTGCAATTGAAGCCAAGC+AGG | + | chr2_4:57811908-57811927 | Msa0337750:CDS | 50.0% | |
| TGCAATTGAAGCCAAGCAGG+TGG | + | chr2_4:57811911-57811930 | Msa0337750:CDS | 50.0% | |
| ! | CAATGGCTTGTCCGATCAGT+TGG | - | chr2_4:57812581-57812600 | None:intergenic | 50.0% |
| AACATGTGCTATCTCCCTCG+CGG | - | chr2_4:57812643-57812662 | None:intergenic | 50.0% | |
| GCAAAAGATCACCTGCTTCC+AGG | - | chr2_4:57812692-57812711 | None:intergenic | 50.0% | |
| !! | GGCCTTGTTAATTTGGGGGA+GGG | + | chr2_4:57812879-57812898 | Msa0337750:three_prime_UTR | 50.0% |
| TCCCCAATTCCCGAACCGTA+CGG | + | chr2_4:57808881-57808900 | Msa0337750:five_prime_UTR | 55.0% | |
| ! | ACCGTACGGTTCGGGAATTG+GGG | - | chr2_4:57808885-57808904 | None:intergenic | 55.0% |
| GATTCCGTGGTTTGAGAGGC+CGG | + | chr2_4:57809517-57809536 | Msa0337750:CDS | 55.0% | |
| ATCACCGGCCTCTCAAACCA+CGG | - | chr2_4:57809524-57809543 | None:intergenic | 55.0% | |
| TGGGAGTCGTGATCTGCAGA+TGG | + | chr2_4:57809586-57809605 | Msa0337750:intron | 55.0% | |
| GTCCTTACTCGTCCTTTGCC+TGG | + | chr2_4:57811285-57811304 | Msa0337750:CDS | 55.0% | |
| TTCTTGTGCAGCCACCTGCT+TGG | - | chr2_4:57811925-57811944 | None:intergenic | 55.0% | |
| TGGCTGCACAAGAAGCTGAG+AGG | + | chr2_4:57811931-57811950 | Msa0337750:CDS | 55.0% | |
| GGCTGCACAAGAAGCTGAGA+GGG | + | chr2_4:57811932-57811951 | Msa0337750:CDS | 55.0% | |
| TGAGGAAGATAGAAGCCGCG+AGG | + | chr2_4:57812625-57812644 | Msa0337750:CDS | 55.0% | |
| GAGGAAGATAGAAGCCGCGA+GGG | + | chr2_4:57812626-57812645 | Msa0337750:CDS | 55.0% | |
| !! | CGGCCTTGTTAATTTGGGGG+AGG | + | chr2_4:57812878-57812897 | Msa0337750:three_prime_UTR | 55.0% |
| GTTGATGCAGCGCCACCACT+TGG | - | chr2_4:57809251-57809270 | None:intergenic | 60.0% | |
| ! | TGGTGGCGCTGCATCAACAC+TGG | + | chr2_4:57809253-57809272 | Msa0337750:CDS | 60.0% |
| GGCCAGGCAAAGGACGAGTA+AGG | - | chr2_4:57811290-57811309 | None:intergenic | 60.0% | |
| GTAGGTAGCTGGCCAGGCAA+AGG | - | chr2_4:57811300-57811319 | None:intergenic | 60.0% | |
| GCAGTTACTGCTGTGGTGCC+TGG | + | chr2_4:57812039-57812058 | Msa0337750:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 57808844 | 57813110 | 57808844 | ID=Msa0337750;Name=Msa0337750 |
| chr2_4 | mRNA | 57808844 | 57813110 | 57808844 | ID=Msa0337750-mRNA-1;Parent=Msa0337750;Name=Msa0337750-mRNA-1;_AED=0.11;_eAED=0.11;_QI=163|0.8|0.83|1|0.8|0.83|6|358|267 |
| chr2_4 | exon | 57808844 | 57809006 | 57808844 | ID=Msa0337750-mRNA-1:exon:17632;Parent=Msa0337750-mRNA-1 |
| chr2_4 | exon | 57809224 | 57809391 | 57809224 | ID=Msa0337750-mRNA-1:exon:17633;Parent=Msa0337750-mRNA-1 |
| chr2_4 | exon | 57809491 | 57809550 | 57809491 | ID=Msa0337750-mRNA-1:exon:17634;Parent=Msa0337750-mRNA-1 |
| chr2_4 | exon | 57811267 | 57811437 | 57811267 | ID=Msa0337750-mRNA-1:exon:17635;Parent=Msa0337750-mRNA-1 |
| chr2_4 | exon | 57811801 | 57812013 | 57811801 | ID=Msa0337750-mRNA-1:exon:17636;Parent=Msa0337750-mRNA-1 |
| chr2_4 | exon | 57812561 | 57813110 | 57812561 | ID=Msa0337750-mRNA-1:exon:17637;Parent=Msa0337750-mRNA-1 |
| chr2_4 | five_prime_UTR | 57808844 | 57809006 | 57808844 | ID=Msa0337750-mRNA-1:five_prime_utr;Parent=Msa0337750-mRNA-1 |
| chr2_4 | CDS | 57809224 | 57809391 | 57809224 | ID=Msa0337750-mRNA-1:cds;Parent=Msa0337750-mRNA-1 |
| chr2_4 | CDS | 57809491 | 57809550 | 57809491 | ID=Msa0337750-mRNA-1:cds;Parent=Msa0337750-mRNA-1 |
| chr2_4 | CDS | 57811267 | 57811437 | 57811267 | ID=Msa0337750-mRNA-1:cds;Parent=Msa0337750-mRNA-1 |
| chr2_4 | CDS | 57811801 | 57812013 | 57811801 | ID=Msa0337750-mRNA-1:cds;Parent=Msa0337750-mRNA-1 |
| chr2_4 | CDS | 57812561 | 57812752 | 57812561 | ID=Msa0337750-mRNA-1:cds;Parent=Msa0337750-mRNA-1 |
| chr2_4 | three_prime_UTR | 57812753 | 57813110 | 57812753 | ID=Msa0337750-mRNA-1:three_prime_utr;Parent=Msa0337750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
