Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422380 | sp|Q9M8L2|FBK30_ARATH | 47.709 | 371 | 170 | 6 | 1 | 364 | 1 | 354 | 8.83e-120 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422380 | G7II60 | 93.407 | 364 | 24 | 0 | 1 | 364 | 1 | 364 | 0.0 | 702 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1422380 | Msa1449580 | 0.803726 | 3.038540e-49 | -8.615850e-47 |
| Msa1422380 | Msa1452070 | -0.823174 | 1.596629e-53 | -8.615850e-47 |
| Msa1422380 | Msa1456490 | 0.832947 | 7.065993e-56 | -8.615850e-47 |
| Msa1422380 | Msa1459990 | 0.812338 | 4.458408e-51 | -8.615850e-47 |
| Msa0686350 | Msa1422380 | -0.821754 | 3.412042e-53 | -8.615850e-47 |
| Msa0783680 | Msa1422380 | 0.868632 | 5.650223e-66 | -8.615850e-47 |
| Msa0815650 | Msa1422380 | 0.804395 | 2.205149e-49 | -8.615850e-47 |
| Msa0225420 | Msa1422380 | 0.947656 | 4.401290e-106 | -8.615850e-47 |
| Msa0225720 | Msa1422380 | 0.952956 | 7.889199e-111 | -8.615850e-47 |
| Msa1269440 | Msa1422380 | 0.943685 | 7.703642e-103 | -8.615850e-47 |
| Msa0412820 | Msa1422380 | 0.830649 | 2.607909e-55 | -8.615850e-47 |
| Msa1038300 | Msa1422380 | 0.804979 | 1.665141e-49 | -8.615850e-47 |
| Msa0242720 | Msa1422380 | 0.801663 | 8.095237e-49 | -8.615850e-47 |
| Msa0294200 | Msa1422380 | 0.800373 | 1.485627e-48 | -8.615850e-47 |
| Msa0334300 | Msa1422380 | 0.806374 | 8.486744e-50 | -8.615850e-47 |
| Msa0573950 | Msa1422380 | 0.805537 | 1.272715e-49 | -8.615850e-47 |
| Msa0576560 | Msa1422380 | 0.828734 | 7.623751e-55 | -8.615850e-47 |
| Msa0856020 | Msa1422380 | 0.804319 | 2.287247e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422380 | MtrunA17_Chr2g0332031 | 93.407 | 364 | 24 | 0 | 1 | 364 | 1 | 364 | 0.0 | 702 |
| Msa1422380 | MtrunA17_Chr4g0004201 | 60.165 | 364 | 139 | 2 | 1 | 364 | 3 | 360 | 2.52e-161 | 456 |
| Msa1422380 | MtrunA17_Chr2g0332021 | 87.402 | 127 | 16 | 0 | 171 | 297 | 1 | 127 | 9.01e-77 | 233 |
| Msa1422380 | MtrunA17_Chr8g0378571 | 36.043 | 369 | 199 | 10 | 1 | 364 | 5 | 341 | 1.49e-59 | 195 |
| Msa1422380 | MtrunA17_Chr7g0260051 | 26.007 | 273 | 170 | 8 | 2 | 266 | 3 | 251 | 3.76e-19 | 87.4 |
| Msa1422380 | MtrunA17_Chr8g0378511 | 29.268 | 205 | 124 | 7 | 3 | 205 | 77 | 262 | 7.32e-14 | 72.4 |
| Msa1422380 | MtrunA17_Chr4g0060541 | 25.097 | 259 | 152 | 7 | 3 | 256 | 31 | 252 | 1.04e-13 | 71.6 |
| Msa1422380 | MtrunA17_Chr4g0011151 | 25.283 | 265 | 152 | 9 | 3 | 260 | 102 | 327 | 1.99e-13 | 71.2 |
| Msa1422380 | MtrunA17_Chr4g0011221 | 27.203 | 261 | 152 | 10 | 3 | 260 | 102 | 327 | 4.98e-13 | 70.1 |
| Msa1422380 | MtrunA17_Chr4g0011171 | 26.820 | 261 | 153 | 10 | 3 | 260 | 102 | 327 | 8.97e-13 | 69.3 |
| Msa1422380 | MtrunA17_Chr4g0063531 | 25.347 | 288 | 172 | 11 | 3 | 277 | 67 | 324 | 4.01e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422380 | AT1G80440.1 | 47.709 | 371 | 170 | 6 | 1 | 364 | 1 | 354 | 8.98e-121 | 353 |
| Msa1422380 | AT1G15670.1 | 48.501 | 367 | 178 | 5 | 1 | 364 | 1 | 359 | 3.04e-119 | 349 |
| Msa1422380 | AT2G44130.1 | 33.333 | 291 | 157 | 6 | 2 | 268 | 18 | 295 | 1.15e-41 | 150 |
| Msa1422380 | AT3G59940.1 | 29.177 | 401 | 228 | 10 | 2 | 353 | 14 | 407 | 1.93e-41 | 150 |
| Msa1422380 | AT3G63220.1 | 25.000 | 332 | 197 | 9 | 3 | 323 | 4 | 294 | 2.81e-18 | 85.5 |
| Msa1422380 | AT3G63220.3 | 25.000 | 332 | 197 | 9 | 3 | 323 | 11 | 301 | 3.27e-18 | 85.1 |
| Msa1422380 | AT3G63220.2 | 25.000 | 332 | 197 | 9 | 3 | 323 | 11 | 301 | 3.27e-18 | 85.1 |
| Msa1422380 | AT2G02870.2 | 24.727 | 275 | 169 | 9 | 3 | 276 | 117 | 354 | 4.08e-15 | 76.6 |
| Msa1422380 | AT2G02870.3 | 24.727 | 275 | 169 | 9 | 3 | 276 | 117 | 354 | 4.08e-15 | 76.6 |
| Msa1422380 | AT2G02870.1 | 24.727 | 275 | 169 | 9 | 3 | 276 | 117 | 354 | 4.08e-15 | 76.6 |
| Msa1422380 | AT1G14330.1 | 27.027 | 259 | 152 | 10 | 3 | 258 | 94 | 318 | 3.36e-14 | 73.9 |
| Msa1422380 | AT1G67480.3 | 28.696 | 230 | 138 | 6 | 3 | 230 | 39 | 244 | 2.71e-12 | 67.8 |
| Msa1422380 | AT1G67480.1 | 28.696 | 230 | 138 | 6 | 3 | 230 | 39 | 244 | 2.71e-12 | 67.8 |
| Msa1422380 | AT1G67480.2 | 28.696 | 230 | 138 | 6 | 3 | 230 | 39 | 244 | 2.71e-12 | 67.8 |
| Msa1422380 | AT2G24540.1 | 27.500 | 200 | 121 | 5 | 3 | 198 | 28 | 207 | 7.86e-11 | 63.5 |
Find 126 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACTATGGAGTTGATTTC+AGG | 0.182172 | tig0025379:+7660 | None:intergenic |
| GGGTAACCCTTCACTTAATT+CGG | 0.272688 | tig0025379:-7970 | None:intergenic |
| TATCTGCTACGTGGCGTTGC+GGG | 0.273171 | tig0025379:+8096 | Msa1422380:CDS |
| TGGAAACTGAAACAGGTATT+TGG | 0.276490 | tig0025379:+7928 | Msa1422380:CDS |
| TGGATTGGGTCTAGTGGGTT+TGG | 0.289853 | tig0025379:+8626 | Msa1422380:CDS |
| TTTGAAGCTTTCCATGAATC+AGG | 0.295391 | tig0025379:-8050 | None:intergenic |
| AGTTTCATACCAGGAATTTC+CGG | 0.301498 | tig0025379:+7719 | Msa1422380:CDS |
| TGGGTTTGGAGAACCTTATA+TGG | 0.316034 | tig0025379:+8640 | Msa1422380:CDS |
| CACTCTCGTGCTATGTCTTC+TGG | 0.327599 | tig0025379:-7687 | None:intergenic |
| TCACGCTCCCTCGCCATATC+AGG | 0.334734 | tig0025379:-8269 | None:intergenic |
| AATACATTTAGTTTATAAAT+CGG | 0.342579 | tig0025379:-7906 | None:intergenic |
| TACTCCAAACACCATTCTTC+AGG | 0.353583 | tig0025379:-8676 | None:intergenic |
| TCCAACACAAAGCCCATATA+AGG | 0.360295 | tig0025379:-8653 | None:intergenic |
| AGGGTATGATCTAGTTGTTA+TGG | 0.362184 | tig0025379:+8016 | Msa1422380:CDS |
| CTTGGGCAGATGCATTGTTA+TGG | 0.371889 | tig0025379:+8606 | Msa1422380:CDS |
| TGGCTACCGCCGGAAATTCC+TGG | 0.381513 | tig0025379:-7728 | None:intergenic |
| CGCCGGAGTTTCGCCGTGTC+CGG | 0.389061 | tig0025379:+7784 | Msa1422380:CDS |
| GATTTATAAACTAAATGTAT+TGG | 0.393923 | tig0025379:+7908 | Msa1422380:CDS |
| AGACATAGCACGAGAGTGTT+TGG | 0.398695 | tig0025379:+7692 | Msa1422380:CDS |
| TTCACCGGCCACGTTCAATC+TGG | 0.407052 | tig0025379:+8719 | Msa1422380:CDS |
| TGTTGCTTGTGTGGGAGCTT+GGG | 0.410270 | tig0025379:+8589 | Msa1422380:CDS |
| GGGTATGATCTAGTTGTTAT+GGG | 0.418612 | tig0025379:+8017 | Msa1422380:CDS |
| GTGGATCCCGCTTCCTGATA+TGG | 0.419518 | tig0025379:+8256 | Msa1422380:CDS |
| GTGGAGGTGGGGTCCGGTCG+AGG | 0.421615 | tig0025379:+8415 | Msa1422380:CDS |
| GAGAAGAATGTACATGTGTA+AGG | 0.422768 | tig0025379:+8496 | Msa1422380:CDS |
| ATACATTTAGTTTATAAATC+GGG | 0.423905 | tig0025379:-7905 | None:intergenic |
| TCGATGTAGCCACGTGGAGG+TGG | 0.423970 | tig0025379:+8402 | Msa1422380:CDS |
| GGTAACCCTTCACTTAATTC+GGG | 0.425963 | tig0025379:-7969 | None:intergenic |
| AGGTGGTGGCGAAGGTGCCT+AGG | 0.429241 | tig0025379:+8555 | Msa1422380:CDS |
| GAGGATGGGACCCTGATTCA+TGG | 0.430085 | tig0025379:+8039 | Msa1422380:CDS |
| GATGATGTGGTGGCATTGGA+TGG | 0.436126 | tig0025379:+8521 | Msa1422380:CDS |
| TTGTGTGGATGGTTGTGAAT+TGG | 0.440798 | tig0025379:+8472 | Msa1422380:CDS |
| CAGATGCATTGTTATGGATT+GGG | 0.443791 | tig0025379:+8612 | Msa1422380:CDS |
| TTCATGGAAAGCTTCAAATT+CGG | 0.444403 | tig0025379:+8055 | Msa1422380:CDS |
| ACCTTATATGGGCTTTGTGT+TGG | 0.447831 | tig0025379:+8652 | Msa1422380:CDS |
| GCAGATGCATTGTTATGGAT+TGG | 0.454389 | tig0025379:+8611 | Msa1422380:CDS |
| AATGTATTGGAAACTGAAAC+AGG | 0.458468 | tig0025379:+7921 | Msa1422380:CDS |
| ATGTTGCTTGTGTGGGAGCT+TGG | 0.459885 | tig0025379:+8588 | Msa1422380:CDS |
| GCAGGGCCCACCAGGCATAT+CGG | 0.462663 | tig0025379:-8120 | None:intergenic |
| GGGTTTGGAGAACCTTATAT+GGG | 0.462959 | tig0025379:+8641 | Msa1422380:CDS |
| CGTTGCGGGGCCGATATGCC+TGG | 0.463058 | tig0025379:+8110 | Msa1422380:CDS |
| CGCCGTGTCCGGAGGAGTAC+AGG | 0.466611 | tig0025379:+7795 | Msa1422380:CDS |
| CAACCATCCACACAAGTCCT+TGG | 0.468884 | tig0025379:-8464 | None:intergenic |
| TGTTATGGATTGGGTCTAGT+GGG | 0.471404 | tig0025379:+8621 | Msa1422380:CDS |
| TGGACCTGAAGAATGGTGTT+TGG | 0.471703 | tig0025379:+8672 | Msa1422380:CDS |
| GGGTGATGATGTGGTGGCAT+TGG | 0.471752 | tig0025379:+8517 | Msa1422380:CDS |
| CGTGCCAGAGCCATTGTCTC+CGG | 0.476636 | tig0025379:-8315 | None:intergenic |
| CGATGTAGCCACGTGGAGGT+GGG | 0.477914 | tig0025379:+8403 | Msa1422380:CDS |
| AGCCACGTGGAGGTGGGGTC+CGG | 0.487081 | tig0025379:+8409 | Msa1422380:CDS |
| ATCTAGTTGTTATGGGAGGA+TGG | 0.491431 | tig0025379:+8024 | Msa1422380:CDS |
| TGTAGCTTTAGCCAATAAAC+CGG | 0.493397 | tig0025379:-7877 | None:intergenic |
| TTGCTCACGGTGGCTACCGC+CGG | 0.494147 | tig0025379:-7738 | None:intergenic |
| TTTGTCAAATTGCGGGTGTA+GGG | 0.495373 | tig0025379:+7997 | Msa1422380:CDS |
| CGAAGGTGCCTAGGGAGATA+AGG | 0.500530 | tig0025379:+8564 | Msa1422380:CDS |
| TGCATCAGATCATGAAAGAA+TGG | 0.501033 | tig0025379:+8157 | Msa1422380:CDS |
| TTTGTGTTGGACCTGAAGAA+TGG | 0.506335 | tig0025379:+8665 | Msa1422380:CDS |
| TGTTTGCCACCCTTTGCTCA+CGG | 0.517498 | tig0025379:-7751 | None:intergenic |
| GGTGGTGGCGAAGGTGCCTA+GGG | 0.518802 | tig0025379:+8556 | Msa1422380:CDS |
| GAAAGAATGGTCTATGTGGC+AGG | 0.519321 | tig0025379:+8170 | Msa1422380:CDS |
| ATCTGCTACGTGGCGTTGCG+GGG | 0.523853 | tig0025379:+8097 | Msa1422380:CDS |
| TCACTTAATTCGGGTCCCAT+TGG | 0.527061 | tig0025379:-7960 | None:intergenic |
| CGGTAGCCACCGTGAGCAAA+GGG | 0.527349 | tig0025379:+7742 | Msa1422380:CDS |
| CCCTCGCCATATCAGGAAGC+GGG | 0.530716 | tig0025379:-8262 | None:intergenic |
| TGTGCCGGAGACAATGGCTC+TGG | 0.531010 | tig0025379:+8311 | Msa1422380:CDS |
| GCGGTAGCCACCGTGAGCAA+AGG | 0.533392 | tig0025379:+7741 | Msa1422380:CDS |
| AGTTGTTGGTGGATATTGTA+CGG | 0.536411 | tig0025379:+8343 | Msa1422380:CDS |
| ATTTGGAGCGAGTTACCAAT+GGG | 0.540800 | tig0025379:+7945 | Msa1422380:CDS |
| TTGTTATGGATTGGGTCTAG+TGG | 0.542297 | tig0025379:+8620 | Msa1422380:CDS |
| TGGTGACACGTGGAAGGTGG+TGG | 0.543700 | tig0025379:+8541 | Msa1422380:CDS |
| GGCACGATCAAAGTTGTTGG+TGG | 0.544929 | tig0025379:+8332 | Msa1422380:CDS |
| TATTTGGAGCGAGTTACCAA+TGG | 0.546070 | tig0025379:+7944 | Msa1422380:CDS |
| TTATCTGCTACGTGGCGTTG+CGG | 0.546414 | tig0025379:+8095 | Msa1422380:CDS |
| ACCCGCAATTTGACAAAACA+AGG | 0.548302 | tig0025379:-7991 | None:intergenic |
| GCAACCAGATTGAACGTGGC+CGG | 0.553033 | tig0025379:-8723 | None:intergenic |
| TCCCTCGCCATATCAGGAAG+CGG | 0.557334 | tig0025379:-8263 | None:intergenic |
| CGGAGTTTCGCCGTGTCCGG+AGG | 0.560636 | tig0025379:+7787 | Msa1422380:CDS |
| CACGTGGAAGGTGGTGGCGA+AGG | 0.560862 | tig0025379:+8547 | Msa1422380:CDS |
| GAGCATGACCTGTACTCCTC+CGG | 0.561000 | tig0025379:-7803 | None:intergenic |
| TCCCGCTTCCTGATATGGCG+AGG | 0.561759 | tig0025379:+8261 | Msa1422380:CDS |
| TTGAAGCTTTCCATGAATCA+GGG | 0.562384 | tig0025379:-8049 | None:intergenic |
| GATAAGGAATGTTGCTTGTG+TGG | 0.563323 | tig0025379:+8580 | Msa1422380:CDS |
| CTCCGGACACGGCGAAACTC+CGG | 0.563978 | tig0025379:-7786 | None:intergenic |
| TCTGGCACGATCAAAGTTGT+TGG | 0.564275 | tig0025379:+8329 | Msa1422380:CDS |
| ATTTGGACTGAACCGTGACT+AGG | 0.569932 | tig0025379:-7833 | None:intergenic |
| TGGATGATGCCACATGTCCA+AGG | 0.571672 | tig0025379:+8447 | Msa1422380:CDS |
| GATGTAGCCACGTGGAGGTG+GGG | 0.572404 | tig0025379:+8404 | Msa1422380:CDS |
| AGAAGAATGTACATGTGTAA+GGG | 0.581931 | tig0025379:+8497 | Msa1422380:CDS |
| TCTAGTTGTTATGGGAGGAT+GGG | 0.587902 | tig0025379:+8025 | Msa1422380:CDS |
| GCAACATTCCTTATCTCCCT+AGG | 0.592170 | tig0025379:-8572 | None:intergenic |
| GCGGGGCCGATATGCCTGGT+GGG | 0.592603 | tig0025379:+8114 | Msa1422380:CDS |
| GGATATTGTACGGAGATGCA+AGG | 0.594849 | tig0025379:+8353 | Msa1422380:CDS |
| CACACAAGTCCTTGGACATG+TGG | 0.595115 | tig0025379:-8456 | None:intergenic |
| TGCGGGGCCGATATGCCTGG+TGG | 0.595490 | tig0025379:+8113 | Msa1422380:CDS |
| TGCTCAGAAAATCCTAGTCA+CGG | 0.599471 | tig0025379:+7821 | Msa1422380:CDS |
| CCCGCTTCCTGATATGGCGA+GGG | 0.599930 | tig0025379:+8262 | Msa1422380:CDS |
| TGTCCAAGGACTTGTGTGGA+TGG | 0.600952 | tig0025379:+8461 | Msa1422380:CDS |
| GAAAACCCAGAAAATTTCAC+CGG | 0.601148 | tig0025379:+8704 | Msa1422380:CDS |
| GACCTGTACTCCTCCGGACA+CGG | 0.612366 | tig0025379:-7797 | None:intergenic |
| ATTGGATGGTGACACGTGGA+AGG | 0.617577 | tig0025379:+8535 | Msa1422380:CDS |
| GAGGTGGGGTCCGGTCGAGG+AGG | 0.618236 | tig0025379:+8418 | Msa1422380:CDS |
| ATGGGACCCGAATTAAGTGA+AGG | 0.619213 | tig0025379:+7963 | Msa1422380:CDS |
| ATAAGGAATGTTGCTTGTGT+GGG | 0.622737 | tig0025379:+8581 | Msa1422380:CDS |
| TCATGAAAGAATGGTCTATG+TGG | 0.631561 | tig0025379:+8166 | Msa1422380:CDS |
| GATATTGTACGGAGATGCAA+GGG | 0.633940 | tig0025379:+8354 | Msa1422380:CDS |
| GGATGGTGACACGTGGAAGG+TGG | 0.634958 | tig0025379:+8538 | Msa1422380:CDS |
| TATGATCTAGTTGTTATGGG+AGG | 0.636400 | tig0025379:+8020 | Msa1422380:CDS |
| GCAAACAGAGATTCAAACGC+CGG | 0.637123 | tig0025379:+7767 | Msa1422380:CDS |
| TGGGACCCGAATTAAGTGAA+GGG | 0.640598 | tig0025379:+7964 | Msa1422380:CDS |
| CATGTGTAAGGGTGATGATG+TGG | 0.641473 | tig0025379:+8508 | Msa1422380:CDS |
| GTCAGCATTTGCTTACGATG+TGG | 0.642705 | tig0025379:+8223 | Msa1422380:CDS |
| TAGCCACCGTGAGCAAAGGG+TGG | 0.650702 | tig0025379:+7745 | Msa1422380:CDS |
| TTTGGTTCGAGTTTCATACC+AGG | 0.651758 | tig0025379:+7710 | Msa1422380:CDS |
| GACCGGACCCCACCTCCACG+TGG | 0.662176 | tig0025379:-8411 | None:intergenic |
| GCGATTCGAACGTAGTGCTG+AGG | 0.664187 | tig0025379:+8376 | Msa1422380:CDS |
| ACGATGTGGCAAATGATGTG+TGG | 0.666045 | tig0025379:+8237 | Msa1422380:CDS |
| AAAAGCAACCAGATTGAACG+TGG | 0.667532 | tig0025379:-8727 | None:intergenic |
| GTGTAAGGGTGATGATGTGG+TGG | 0.677538 | tig0025379:+8511 | Msa1422380:CDS |
| AGAATGGTCTATGTGGCAGG+AGG | 0.679340 | tig0025379:+8173 | Msa1422380:CDS |
| CCCGCAATTTGACAAAACAA+GGG | 0.679482 | tig0025379:-7990 | None:intergenic |
| TTGCCACCCTTTGCTCACGG+TGG | 0.683953 | tig0025379:-7748 | None:intergenic |
| AGTTCGATGTAGCCACGTGG+AGG | 0.685810 | tig0025379:+8399 | Msa1422380:CDS |
| TTCATACCAGGAATTTCCGG+CGG | 0.694230 | tig0025379:+7722 | Msa1422380:CDS |
| TGGCATTGGATGGTGACACG+TGG | 0.697013 | tig0025379:+8531 | Msa1422380:CDS |
| TGTGGCAGGAGGACATGACG+AGG | 0.708701 | tig0025379:+8184 | Msa1422380:CDS |
| AGGAGTTCGATGTAGCCACG+TGG | 0.736829 | tig0025379:+8396 | Msa1422380:CDS |
| CACATGTCCAAGGACTTGTG+TGG | 0.739846 | tig0025379:+8457 | Msa1422380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATACATTTAGTTTATAAAT+CGG | - | tig0025379:7909-7928 | None:intergenic | 10.0% |
| !!! | AATACATTTAGTTTATAAAT+CGG | - | tig0025379:7909-7928 | None:intergenic | 10.0% |
| !!! | ATACATTTAGTTTATAAATC+GGG | - | tig0025379:7908-7927 | None:intergenic | 15.0% |
| !! | GATTTATAAACTAAATGTAT+TGG | + | tig0025379:7908-7927 | Msa1422380:CDS | 15.0% |
| !!! | ATACATTTAGTTTATAAATC+GGG | - | tig0025379:7908-7927 | None:intergenic | 15.0% |
| !! | GATTTATAAACTAAATGTAT+TGG | + | tig0025379:7908-7927 | Msa1422380:CDS | 15.0% |
| !!! | GCTTTTTTCTGAATCAAATT+TGG | - | tig0025379:7853-7872 | None:intergenic | 25.0% |
| !!! | ATAATTTTTTATCTGCTACG+TGG | + | tig0025379:8087-8106 | Msa1422380:CDS | 25.0% |
| !!! | GCTTTTTTCTGAATCAAATT+TGG | - | tig0025379:7853-7872 | None:intergenic | 25.0% |
| !!! | ATAATTTTTTATCTGCTACG+TGG | + | tig0025379:8087-8106 | Msa1422380:CDS | 25.0% |
| GATTCAGAAAAAAGCAAAAC+CGG | + | tig0025379:7858-7877 | Msa1422380:CDS | 30.0% | |
| ! | AAAAAGCAAAACCGGTTTAT+TGG | + | tig0025379:7866-7885 | Msa1422380:CDS | 30.0% |
| AATGTATTGGAAACTGAAAC+AGG | + | tig0025379:7921-7940 | Msa1422380:CDS | 30.0% | |
| TTCATGGAAAGCTTCAAATT+CGG | + | tig0025379:8055-8074 | Msa1422380:CDS | 30.0% | |
| AGAAGAATGTACATGTGTAA+GGG | + | tig0025379:8497-8516 | Msa1422380:CDS | 30.0% | |
| GATTCAGAAAAAAGCAAAAC+CGG | + | tig0025379:7858-7877 | Msa1422380:CDS | 30.0% | |
| ! | AAAAAGCAAAACCGGTTTAT+TGG | + | tig0025379:7866-7885 | Msa1422380:CDS | 30.0% |
| AATGTATTGGAAACTGAAAC+AGG | + | tig0025379:7921-7940 | Msa1422380:CDS | 30.0% | |
| TTCATGGAAAGCTTCAAATT+CGG | + | tig0025379:8055-8074 | Msa1422380:CDS | 30.0% | |
| AGAAGAATGTACATGTGTAA+GGG | + | tig0025379:8497-8516 | Msa1422380:CDS | 30.0% | |
| AGTTTCATACCAGGAATTTC+CGG | + | tig0025379:7719-7738 | Msa1422380:CDS | 35.0% | |
| !! | TGTAGCTTTAGCCAATAAAC+CGG | - | tig0025379:7880-7899 | None:intergenic | 35.0% |
| TGGAAACTGAAACAGGTATT+TGG | + | tig0025379:7928-7947 | Msa1422380:CDS | 35.0% | |
| !!! | ACCCTTGTTTTGTCAAATTG+CGG | + | tig0025379:7989-8008 | Msa1422380:CDS | 35.0% |
| AGGGTATGATCTAGTTGTTA+TGG | + | tig0025379:8016-8035 | Msa1422380:CDS | 35.0% | |
| GGGTATGATCTAGTTGTTAT+GGG | + | tig0025379:8017-8036 | Msa1422380:CDS | 35.0% | |
| TATGATCTAGTTGTTATGGG+AGG | + | tig0025379:8020-8039 | Msa1422380:CDS | 35.0% | |
| TTGAAGCTTTCCATGAATCA+GGG | - | tig0025379:8052-8071 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTTTCCATGAATC+AGG | - | tig0025379:8053-8072 | None:intergenic | 35.0% |
| TGCATCAGATCATGAAAGAA+TGG | + | tig0025379:8157-8176 | Msa1422380:CDS | 35.0% | |
| TCATGAAAGAATGGTCTATG+TGG | + | tig0025379:8166-8185 | Msa1422380:CDS | 35.0% | |
| ! | TGTAAGATAGTGTTTTGTGC+CGG | + | tig0025379:8296-8315 | Msa1422380:CDS | 35.0% |
| ! | AGTTGTTGGTGGATATTGTA+CGG | + | tig0025379:8343-8362 | Msa1422380:CDS | 35.0% |
| GAGAAGAATGTACATGTGTA+AGG | + | tig0025379:8496-8515 | Msa1422380:CDS | 35.0% | |
| ! | ATAAGGAATGTTGCTTGTGT+GGG | + | tig0025379:8581-8600 | Msa1422380:CDS | 35.0% |
| CAGATGCATTGTTATGGATT+GGG | + | tig0025379:8612-8631 | Msa1422380:CDS | 35.0% | |
| GAAAACCCAGAAAATTTCAC+CGG | + | tig0025379:8704-8723 | Msa1422380:CDS | 35.0% | |
| AGTTTCATACCAGGAATTTC+CGG | + | tig0025379:7719-7738 | Msa1422380:CDS | 35.0% | |
| !! | TGTAGCTTTAGCCAATAAAC+CGG | - | tig0025379:7880-7899 | None:intergenic | 35.0% |
| TGGAAACTGAAACAGGTATT+TGG | + | tig0025379:7928-7947 | Msa1422380:CDS | 35.0% | |
| !!! | ACCCTTGTTTTGTCAAATTG+CGG | + | tig0025379:7989-8008 | Msa1422380:CDS | 35.0% |
| AGGGTATGATCTAGTTGTTA+TGG | + | tig0025379:8016-8035 | Msa1422380:CDS | 35.0% | |
| GGGTATGATCTAGTTGTTAT+GGG | + | tig0025379:8017-8036 | Msa1422380:CDS | 35.0% | |
| TATGATCTAGTTGTTATGGG+AGG | + | tig0025379:8020-8039 | Msa1422380:CDS | 35.0% | |
| TTGAAGCTTTCCATGAATCA+GGG | - | tig0025379:8052-8071 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTTTCCATGAATC+AGG | - | tig0025379:8053-8072 | None:intergenic | 35.0% |
| TGCATCAGATCATGAAAGAA+TGG | + | tig0025379:8157-8176 | Msa1422380:CDS | 35.0% | |
| TCATGAAAGAATGGTCTATG+TGG | + | tig0025379:8166-8185 | Msa1422380:CDS | 35.0% | |
| ! | TGTAAGATAGTGTTTTGTGC+CGG | + | tig0025379:8296-8315 | Msa1422380:CDS | 35.0% |
| ! | AGTTGTTGGTGGATATTGTA+CGG | + | tig0025379:8343-8362 | Msa1422380:CDS | 35.0% |
| GAGAAGAATGTACATGTGTA+AGG | + | tig0025379:8496-8515 | Msa1422380:CDS | 35.0% | |
| ! | ATAAGGAATGTTGCTTGTGT+GGG | + | tig0025379:8581-8600 | Msa1422380:CDS | 35.0% |
| CAGATGCATTGTTATGGATT+GGG | + | tig0025379:8612-8631 | Msa1422380:CDS | 35.0% | |
| GAAAACCCAGAAAATTTCAC+CGG | + | tig0025379:8704-8723 | Msa1422380:CDS | 35.0% | |
| ! | TTTGGTTCGAGTTTCATACC+AGG | + | tig0025379:7710-7729 | Msa1422380:CDS | 40.0% |
| TGCTCAGAAAATCCTAGTCA+CGG | + | tig0025379:7821-7840 | Msa1422380:CDS | 40.0% | |
| ! | TATTTGGAGCGAGTTACCAA+TGG | + | tig0025379:7944-7963 | Msa1422380:CDS | 40.0% |
| ! | ATTTGGAGCGAGTTACCAAT+GGG | + | tig0025379:7945-7964 | Msa1422380:CDS | 40.0% |
| GGTAACCCTTCACTTAATTC+GGG | - | tig0025379:7972-7991 | None:intergenic | 40.0% | |
| GGGTAACCCTTCACTTAATT+CGG | - | tig0025379:7973-7992 | None:intergenic | 40.0% | |
| CCCGCAATTTGACAAAACAA+GGG | - | tig0025379:7993-8012 | None:intergenic | 40.0% | |
| !!! | CCCTTGTTTTGTCAAATTGC+GGG | + | tig0025379:7990-8009 | Msa1422380:CDS | 40.0% |
| ACCCGCAATTTGACAAAACA+AGG | - | tig0025379:7994-8013 | None:intergenic | 40.0% | |
| ! | TTTTGTCAAATTGCGGGTGT+AGG | + | tig0025379:7996-8015 | Msa1422380:CDS | 40.0% |
| TTTGTCAAATTGCGGGTGTA+GGG | + | tig0025379:7997-8016 | Msa1422380:CDS | 40.0% | |
| ATCTAGTTGTTATGGGAGGA+TGG | + | tig0025379:8024-8043 | Msa1422380:CDS | 40.0% | |
| TCTAGTTGTTATGGGAGGAT+GGG | + | tig0025379:8025-8044 | Msa1422380:CDS | 40.0% | |
| GCACAAGAGAAAAATGTGCA+GGG | - | tig0025379:8140-8159 | None:intergenic | 40.0% | |
| TGCACAAGAGAAAAATGTGC+AGG | - | tig0025379:8141-8160 | None:intergenic | 40.0% | |
| GATATTGTACGGAGATGCAA+GGG | + | tig0025379:8354-8373 | Msa1422380:CDS | 40.0% | |
| TTGTGTGGATGGTTGTGAAT+TGG | + | tig0025379:8472-8491 | Msa1422380:CDS | 40.0% | |
| ! | GATAAGGAATGTTGCTTGTG+TGG | + | tig0025379:8580-8599 | Msa1422380:CDS | 40.0% |
| GCAGATGCATTGTTATGGAT+TGG | + | tig0025379:8611-8630 | Msa1422380:CDS | 40.0% | |
| !! | TTGTTATGGATTGGGTCTAG+TGG | + | tig0025379:8620-8639 | Msa1422380:CDS | 40.0% |
| !! | TGTTATGGATTGGGTCTAGT+GGG | + | tig0025379:8621-8640 | Msa1422380:CDS | 40.0% |
| TGGGTTTGGAGAACCTTATA+TGG | + | tig0025379:8640-8659 | Msa1422380:CDS | 40.0% | |
| GGGTTTGGAGAACCTTATAT+GGG | + | tig0025379:8641-8660 | Msa1422380:CDS | 40.0% | |
| ! | ACCTTATATGGGCTTTGTGT+TGG | + | tig0025379:8652-8671 | Msa1422380:CDS | 40.0% |
| TCCAACACAAAGCCCATATA+AGG | - | tig0025379:8656-8675 | None:intergenic | 40.0% | |
| TTTGTGTTGGACCTGAAGAA+TGG | + | tig0025379:8665-8684 | Msa1422380:CDS | 40.0% | |
| TACTCCAAACACCATTCTTC+AGG | - | tig0025379:8679-8698 | None:intergenic | 40.0% | |
| AAAAGCAACCAGATTGAACG+TGG | - | tig0025379:8730-8749 | None:intergenic | 40.0% | |
| !!! | CGTTCAATCTGGTTGCTTTT+TGG | + | tig0025379:8730-8749 | Msa1422380:CDS | 40.0% |
| ! | TTTGGTTCGAGTTTCATACC+AGG | + | tig0025379:7710-7729 | Msa1422380:CDS | 40.0% |
| TGCTCAGAAAATCCTAGTCA+CGG | + | tig0025379:7821-7840 | Msa1422380:CDS | 40.0% | |
| ! | TATTTGGAGCGAGTTACCAA+TGG | + | tig0025379:7944-7963 | Msa1422380:CDS | 40.0% |
| ! | ATTTGGAGCGAGTTACCAAT+GGG | + | tig0025379:7945-7964 | Msa1422380:CDS | 40.0% |
| GGTAACCCTTCACTTAATTC+GGG | - | tig0025379:7972-7991 | None:intergenic | 40.0% | |
| GGGTAACCCTTCACTTAATT+CGG | - | tig0025379:7973-7992 | None:intergenic | 40.0% | |
| CCCGCAATTTGACAAAACAA+GGG | - | tig0025379:7993-8012 | None:intergenic | 40.0% | |
| !!! | CCCTTGTTTTGTCAAATTGC+GGG | + | tig0025379:7990-8009 | Msa1422380:CDS | 40.0% |
| ACCCGCAATTTGACAAAACA+AGG | - | tig0025379:7994-8013 | None:intergenic | 40.0% | |
| ! | TTTTGTCAAATTGCGGGTGT+AGG | + | tig0025379:7996-8015 | Msa1422380:CDS | 40.0% |
| TTTGTCAAATTGCGGGTGTA+GGG | + | tig0025379:7997-8016 | Msa1422380:CDS | 40.0% | |
| ATCTAGTTGTTATGGGAGGA+TGG | + | tig0025379:8024-8043 | Msa1422380:CDS | 40.0% | |
| TCTAGTTGTTATGGGAGGAT+GGG | + | tig0025379:8025-8044 | Msa1422380:CDS | 40.0% | |
| GCACAAGAGAAAAATGTGCA+GGG | - | tig0025379:8140-8159 | None:intergenic | 40.0% | |
| TGCACAAGAGAAAAATGTGC+AGG | - | tig0025379:8141-8160 | None:intergenic | 40.0% | |
| GATATTGTACGGAGATGCAA+GGG | + | tig0025379:8354-8373 | Msa1422380:CDS | 40.0% | |
| TTGTGTGGATGGTTGTGAAT+TGG | + | tig0025379:8472-8491 | Msa1422380:CDS | 40.0% | |
| ! | GATAAGGAATGTTGCTTGTG+TGG | + | tig0025379:8580-8599 | Msa1422380:CDS | 40.0% |
| GCAGATGCATTGTTATGGAT+TGG | + | tig0025379:8611-8630 | Msa1422380:CDS | 40.0% | |
| !! | TTGTTATGGATTGGGTCTAG+TGG | + | tig0025379:8620-8639 | Msa1422380:CDS | 40.0% |
| !! | TGTTATGGATTGGGTCTAGT+GGG | + | tig0025379:8621-8640 | Msa1422380:CDS | 40.0% |
| TGGGTTTGGAGAACCTTATA+TGG | + | tig0025379:8640-8659 | Msa1422380:CDS | 40.0% | |
| GGGTTTGGAGAACCTTATAT+GGG | + | tig0025379:8641-8660 | Msa1422380:CDS | 40.0% | |
| ! | ACCTTATATGGGCTTTGTGT+TGG | + | tig0025379:8652-8671 | Msa1422380:CDS | 40.0% |
| TCCAACACAAAGCCCATATA+AGG | - | tig0025379:8656-8675 | None:intergenic | 40.0% | |
| TTTGTGTTGGACCTGAAGAA+TGG | + | tig0025379:8665-8684 | Msa1422380:CDS | 40.0% | |
| TACTCCAAACACCATTCTTC+AGG | - | tig0025379:8679-8698 | None:intergenic | 40.0% | |
| AAAAGCAACCAGATTGAACG+TGG | - | tig0025379:8730-8749 | None:intergenic | 40.0% | |
| !!! | CGTTCAATCTGGTTGCTTTT+TGG | + | tig0025379:8730-8749 | Msa1422380:CDS | 40.0% |
| !! | AGACATAGCACGAGAGTGTT+TGG | + | tig0025379:7692-7711 | Msa1422380:CDS | 45.0% |
| TTCATACCAGGAATTTCCGG+CGG | + | tig0025379:7722-7741 | Msa1422380:CDS | 45.0% | |
| GCAAACAGAGATTCAAACGC+CGG | + | tig0025379:7767-7786 | Msa1422380:CDS | 45.0% | |
| ATTTGGACTGAACCGTGACT+AGG | - | tig0025379:7836-7855 | None:intergenic | 45.0% | |
| TCACTTAATTCGGGTCCCAT+TGG | - | tig0025379:7963-7982 | None:intergenic | 45.0% | |
| ATGGGACCCGAATTAAGTGA+AGG | + | tig0025379:7963-7982 | Msa1422380:CDS | 45.0% | |
| TGGGACCCGAATTAAGTGAA+GGG | + | tig0025379:7964-7983 | Msa1422380:CDS | 45.0% | |
| GAAAGAATGGTCTATGTGGC+AGG | + | tig0025379:8170-8189 | Msa1422380:CDS | 45.0% | |
| GTCAGCATTTGCTTACGATG+TGG | + | tig0025379:8223-8242 | Msa1422380:CDS | 45.0% | |
| ACGATGTGGCAAATGATGTG+TGG | + | tig0025379:8237-8256 | Msa1422380:CDS | 45.0% | |
| TCTGGCACGATCAAAGTTGT+TGG | + | tig0025379:8329-8348 | Msa1422380:CDS | 45.0% | |
| GGATATTGTACGGAGATGCA+AGG | + | tig0025379:8353-8372 | Msa1422380:CDS | 45.0% | |
| ! | CATGTGTAAGGGTGATGATG+TGG | + | tig0025379:8508-8527 | Msa1422380:CDS | 45.0% |
| GCAACATTCCTTATCTCCCT+AGG | - | tig0025379:8575-8594 | None:intergenic | 45.0% | |
| CTTGGGCAGATGCATTGTTA+TGG | + | tig0025379:8606-8625 | Msa1422380:CDS | 45.0% | |
| TGGACCTGAAGAATGGTGTT+TGG | + | tig0025379:8672-8691 | Msa1422380:CDS | 45.0% | |
| !! | AGACATAGCACGAGAGTGTT+TGG | + | tig0025379:7692-7711 | Msa1422380:CDS | 45.0% |
| TTCATACCAGGAATTTCCGG+CGG | + | tig0025379:7722-7741 | Msa1422380:CDS | 45.0% | |
| GCAAACAGAGATTCAAACGC+CGG | + | tig0025379:7767-7786 | Msa1422380:CDS | 45.0% | |
| ATTTGGACTGAACCGTGACT+AGG | - | tig0025379:7836-7855 | None:intergenic | 45.0% | |
| TCACTTAATTCGGGTCCCAT+TGG | - | tig0025379:7963-7982 | None:intergenic | 45.0% | |
| ATGGGACCCGAATTAAGTGA+AGG | + | tig0025379:7963-7982 | Msa1422380:CDS | 45.0% | |
| TGGGACCCGAATTAAGTGAA+GGG | + | tig0025379:7964-7983 | Msa1422380:CDS | 45.0% | |
| GAAAGAATGGTCTATGTGGC+AGG | + | tig0025379:8170-8189 | Msa1422380:CDS | 45.0% | |
| GTCAGCATTTGCTTACGATG+TGG | + | tig0025379:8223-8242 | Msa1422380:CDS | 45.0% | |
| ACGATGTGGCAAATGATGTG+TGG | + | tig0025379:8237-8256 | Msa1422380:CDS | 45.0% | |
| TCTGGCACGATCAAAGTTGT+TGG | + | tig0025379:8329-8348 | Msa1422380:CDS | 45.0% | |
| GGATATTGTACGGAGATGCA+AGG | + | tig0025379:8353-8372 | Msa1422380:CDS | 45.0% | |
| ! | CATGTGTAAGGGTGATGATG+TGG | + | tig0025379:8508-8527 | Msa1422380:CDS | 45.0% |
| GCAACATTCCTTATCTCCCT+AGG | - | tig0025379:8575-8594 | None:intergenic | 45.0% | |
| CTTGGGCAGATGCATTGTTA+TGG | + | tig0025379:8606-8625 | Msa1422380:CDS | 45.0% | |
| TGGACCTGAAGAATGGTGTT+TGG | + | tig0025379:8672-8691 | Msa1422380:CDS | 45.0% | |
| CACTCTCGTGCTATGTCTTC+TGG | - | tig0025379:7690-7709 | None:intergenic | 50.0% | |
| TGTTTGCCACCCTTTGCTCA+CGG | - | tig0025379:7754-7773 | None:intergenic | 50.0% | |
| TTATCTGCTACGTGGCGTTG+CGG | + | tig0025379:8095-8114 | Msa1422380:CDS | 50.0% | |
| AGAATGGTCTATGTGGCAGG+AGG | + | tig0025379:8173-8192 | Msa1422380:CDS | 50.0% | |
| ! | GTGTTTTGTGCCGGAGACAA+TGG | + | tig0025379:8305-8324 | Msa1422380:CDS | 50.0% |
| GGCACGATCAAAGTTGTTGG+TGG | + | tig0025379:8332-8351 | Msa1422380:CDS | 50.0% | |
| TCCAAAAACTCCTCCTCGAC+CGG | - | tig0025379:8431-8450 | None:intergenic | 50.0% | |
| TGGATGATGCCACATGTCCA+AGG | + | tig0025379:8447-8466 | Msa1422380:CDS | 50.0% | |
| CACACAAGTCCTTGGACATG+TGG | - | tig0025379:8459-8478 | None:intergenic | 50.0% | |
| CACATGTCCAAGGACTTGTG+TGG | + | tig0025379:8457-8476 | Msa1422380:CDS | 50.0% | |
| TGTCCAAGGACTTGTGTGGA+TGG | + | tig0025379:8461-8480 | Msa1422380:CDS | 50.0% | |
| CAACCATCCACACAAGTCCT+TGG | - | tig0025379:8467-8486 | None:intergenic | 50.0% | |
| ! | GTGTAAGGGTGATGATGTGG+TGG | + | tig0025379:8511-8530 | Msa1422380:CDS | 50.0% |
| ! | GATGATGTGGTGGCATTGGA+TGG | + | tig0025379:8521-8540 | Msa1422380:CDS | 50.0% |
| ATTGGATGGTGACACGTGGA+AGG | + | tig0025379:8535-8554 | Msa1422380:CDS | 50.0% | |
| ! | ATGTTGCTTGTGTGGGAGCT+TGG | + | tig0025379:8588-8607 | Msa1422380:CDS | 50.0% |
| ! | TGTTGCTTGTGTGGGAGCTT+GGG | + | tig0025379:8589-8608 | Msa1422380:CDS | 50.0% |
| !! | TGGATTGGGTCTAGTGGGTT+TGG | + | tig0025379:8626-8645 | Msa1422380:CDS | 50.0% |
| ! | CGTGGCCGGTGAAATTTTCT+GGG | - | tig0025379:8712-8731 | None:intergenic | 50.0% |
| ! | ACGTGGCCGGTGAAATTTTC+TGG | - | tig0025379:8713-8732 | None:intergenic | 50.0% |
| CACTCTCGTGCTATGTCTTC+TGG | - | tig0025379:7690-7709 | None:intergenic | 50.0% | |
| TGTTTGCCACCCTTTGCTCA+CGG | - | tig0025379:7754-7773 | None:intergenic | 50.0% | |
| TTATCTGCTACGTGGCGTTG+CGG | + | tig0025379:8095-8114 | Msa1422380:CDS | 50.0% | |
| AGAATGGTCTATGTGGCAGG+AGG | + | tig0025379:8173-8192 | Msa1422380:CDS | 50.0% | |
| ! | GTGTTTTGTGCCGGAGACAA+TGG | + | tig0025379:8305-8324 | Msa1422380:CDS | 50.0% |
| GGCACGATCAAAGTTGTTGG+TGG | + | tig0025379:8332-8351 | Msa1422380:CDS | 50.0% | |
| TCCAAAAACTCCTCCTCGAC+CGG | - | tig0025379:8431-8450 | None:intergenic | 50.0% | |
| TGGATGATGCCACATGTCCA+AGG | + | tig0025379:8447-8466 | Msa1422380:CDS | 50.0% | |
| CACACAAGTCCTTGGACATG+TGG | - | tig0025379:8459-8478 | None:intergenic | 50.0% | |
| CACATGTCCAAGGACTTGTG+TGG | + | tig0025379:8457-8476 | Msa1422380:CDS | 50.0% | |
| TGTCCAAGGACTTGTGTGGA+TGG | + | tig0025379:8461-8480 | Msa1422380:CDS | 50.0% | |
| CAACCATCCACACAAGTCCT+TGG | - | tig0025379:8467-8486 | None:intergenic | 50.0% | |
| ! | GTGTAAGGGTGATGATGTGG+TGG | + | tig0025379:8511-8530 | Msa1422380:CDS | 50.0% |
| ! | GATGATGTGGTGGCATTGGA+TGG | + | tig0025379:8521-8540 | Msa1422380:CDS | 50.0% |
| ATTGGATGGTGACACGTGGA+AGG | + | tig0025379:8535-8554 | Msa1422380:CDS | 50.0% | |
| ! | ATGTTGCTTGTGTGGGAGCT+TGG | + | tig0025379:8588-8607 | Msa1422380:CDS | 50.0% |
| ! | TGTTGCTTGTGTGGGAGCTT+GGG | + | tig0025379:8589-8608 | Msa1422380:CDS | 50.0% |
| !! | TGGATTGGGTCTAGTGGGTT+TGG | + | tig0025379:8626-8645 | Msa1422380:CDS | 50.0% |
| ! | CGTGGCCGGTGAAATTTTCT+GGG | - | tig0025379:8712-8731 | None:intergenic | 50.0% |
| ! | ACGTGGCCGGTGAAATTTTC+TGG | - | tig0025379:8713-8732 | None:intergenic | 50.0% |
| GAGCATGACCTGTACTCCTC+CGG | - | tig0025379:7806-7825 | None:intergenic | 55.0% | |
| GAGGATGGGACCCTGATTCA+TGG | + | tig0025379:8039-8058 | Msa1422380:CDS | 55.0% | |
| TATCTGCTACGTGGCGTTGC+GGG | + | tig0025379:8096-8115 | Msa1422380:CDS | 55.0% | |
| AAAAATGTGCAGGGCCCACC+AGG | - | tig0025379:8131-8150 | None:intergenic | 55.0% | |
| GTGGATCCCGCTTCCTGATA+TGG | + | tig0025379:8256-8275 | Msa1422380:CDS | 55.0% | |
| TCCCTCGCCATATCAGGAAG+CGG | - | tig0025379:8266-8285 | None:intergenic | 55.0% | |
| GCGATTCGAACGTAGTGCTG+AGG | + | tig0025379:8376-8395 | Msa1422380:CDS | 55.0% | |
| AGGAGTTCGATGTAGCCACG+TGG | + | tig0025379:8396-8415 | Msa1422380:CDS | 55.0% | |
| AGTTCGATGTAGCCACGTGG+AGG | + | tig0025379:8399-8418 | Msa1422380:CDS | 55.0% | |
| ! | TCCGGTCGAGGAGGAGTTTT+TGG | + | tig0025379:8427-8446 | Msa1422380:CDS | 55.0% |
| ! | GGGTGATGATGTGGTGGCAT+TGG | + | tig0025379:8517-8536 | Msa1422380:CDS | 55.0% |
| ! | TGGCATTGGATGGTGACACG+TGG | + | tig0025379:8531-8550 | Msa1422380:CDS | 55.0% |
| !! | CGAAGGTGCCTAGGGAGATA+AGG | + | tig0025379:8564-8583 | Msa1422380:CDS | 55.0% |
| TTCACCGGCCACGTTCAATC+TGG | + | tig0025379:8719-8738 | Msa1422380:CDS | 55.0% | |
| GCAACCAGATTGAACGTGGC+CGG | - | tig0025379:8726-8745 | None:intergenic | 55.0% | |
| GAGCATGACCTGTACTCCTC+CGG | - | tig0025379:7806-7825 | None:intergenic | 55.0% | |
| GAGGATGGGACCCTGATTCA+TGG | + | tig0025379:8039-8058 | Msa1422380:CDS | 55.0% | |
| TATCTGCTACGTGGCGTTGC+GGG | + | tig0025379:8096-8115 | Msa1422380:CDS | 55.0% | |
| AAAAATGTGCAGGGCCCACC+AGG | - | tig0025379:8131-8150 | None:intergenic | 55.0% | |
| GTGGATCCCGCTTCCTGATA+TGG | + | tig0025379:8256-8275 | Msa1422380:CDS | 55.0% | |
| TCCCTCGCCATATCAGGAAG+CGG | - | tig0025379:8266-8285 | None:intergenic | 55.0% | |
| GCGATTCGAACGTAGTGCTG+AGG | + | tig0025379:8376-8395 | Msa1422380:CDS | 55.0% | |
| AGGAGTTCGATGTAGCCACG+TGG | + | tig0025379:8396-8415 | Msa1422380:CDS | 55.0% | |
| AGTTCGATGTAGCCACGTGG+AGG | + | tig0025379:8399-8418 | Msa1422380:CDS | 55.0% | |
| ! | TCCGGTCGAGGAGGAGTTTT+TGG | + | tig0025379:8427-8446 | Msa1422380:CDS | 55.0% |
| ! | GGGTGATGATGTGGTGGCAT+TGG | + | tig0025379:8517-8536 | Msa1422380:CDS | 55.0% |
| ! | TGGCATTGGATGGTGACACG+TGG | + | tig0025379:8531-8550 | Msa1422380:CDS | 55.0% |
| !! | CGAAGGTGCCTAGGGAGATA+AGG | + | tig0025379:8564-8583 | Msa1422380:CDS | 55.0% |
| TTCACCGGCCACGTTCAATC+TGG | + | tig0025379:8719-8738 | Msa1422380:CDS | 55.0% | |
| GCAACCAGATTGAACGTGGC+CGG | - | tig0025379:8726-8745 | None:intergenic | 55.0% | |
| TGGCTACCGCCGGAAATTCC+TGG | - | tig0025379:7731-7750 | None:intergenic | 60.0% | |
| CGGTAGCCACCGTGAGCAAA+GGG | + | tig0025379:7742-7761 | Msa1422380:CDS | 60.0% | |
| TAGCCACCGTGAGCAAAGGG+TGG | + | tig0025379:7745-7764 | Msa1422380:CDS | 60.0% | |
| TTGCCACCCTTTGCTCACGG+TGG | - | tig0025379:7751-7770 | None:intergenic | 60.0% | |
| GACCTGTACTCCTCCGGACA+CGG | - | tig0025379:7800-7819 | None:intergenic | 60.0% | |
| ATCTGCTACGTGGCGTTGCG+GGG | + | tig0025379:8097-8116 | Msa1422380:CDS | 60.0% | |
| TGTGGCAGGAGGACATGACG+AGG | + | tig0025379:8184-8203 | Msa1422380:CDS | 60.0% | |
| TCCCGCTTCCTGATATGGCG+AGG | + | tig0025379:8261-8280 | Msa1422380:CDS | 60.0% | |
| CCCTCGCCATATCAGGAAGC+GGG | - | tig0025379:8265-8284 | None:intergenic | 60.0% | |
| CCCGCTTCCTGATATGGCGA+GGG | + | tig0025379:8262-8281 | Msa1422380:CDS | 60.0% | |
| TCACGCTCCCTCGCCATATC+AGG | - | tig0025379:8272-8291 | None:intergenic | 60.0% | |
| TGTGCCGGAGACAATGGCTC+TGG | + | tig0025379:8311-8330 | Msa1422380:CDS | 60.0% | |
| CGTGCCAGAGCCATTGTCTC+CGG | - | tig0025379:8318-8337 | None:intergenic | 60.0% | |
| TCGATGTAGCCACGTGGAGG+TGG | + | tig0025379:8402-8421 | Msa1422380:CDS | 60.0% | |
| CGATGTAGCCACGTGGAGGT+GGG | + | tig0025379:8403-8422 | Msa1422380:CDS | 60.0% | |
| GATGTAGCCACGTGGAGGTG+GGG | + | tig0025379:8404-8423 | Msa1422380:CDS | 60.0% | |
| GGATGGTGACACGTGGAAGG+TGG | + | tig0025379:8538-8557 | Msa1422380:CDS | 60.0% | |
| TGGTGACACGTGGAAGGTGG+TGG | + | tig0025379:8541-8560 | Msa1422380:CDS | 60.0% | |
| TGGCTACCGCCGGAAATTCC+TGG | - | tig0025379:7731-7750 | None:intergenic | 60.0% | |
| CGGTAGCCACCGTGAGCAAA+GGG | + | tig0025379:7742-7761 | Msa1422380:CDS | 60.0% | |
| TAGCCACCGTGAGCAAAGGG+TGG | + | tig0025379:7745-7764 | Msa1422380:CDS | 60.0% | |
| TTGCCACCCTTTGCTCACGG+TGG | - | tig0025379:7751-7770 | None:intergenic | 60.0% | |
| GACCTGTACTCCTCCGGACA+CGG | - | tig0025379:7800-7819 | None:intergenic | 60.0% | |
| ATCTGCTACGTGGCGTTGCG+GGG | + | tig0025379:8097-8116 | Msa1422380:CDS | 60.0% | |
| TGTGGCAGGAGGACATGACG+AGG | + | tig0025379:8184-8203 | Msa1422380:CDS | 60.0% | |
| TCCCGCTTCCTGATATGGCG+AGG | + | tig0025379:8261-8280 | Msa1422380:CDS | 60.0% | |
| CCCTCGCCATATCAGGAAGC+GGG | - | tig0025379:8265-8284 | None:intergenic | 60.0% | |
| CCCGCTTCCTGATATGGCGA+GGG | + | tig0025379:8262-8281 | Msa1422380:CDS | 60.0% | |
| TCACGCTCCCTCGCCATATC+AGG | - | tig0025379:8272-8291 | None:intergenic | 60.0% | |
| TGTGCCGGAGACAATGGCTC+TGG | + | tig0025379:8311-8330 | Msa1422380:CDS | 60.0% | |
| CGTGCCAGAGCCATTGTCTC+CGG | - | tig0025379:8318-8337 | None:intergenic | 60.0% | |
| TCGATGTAGCCACGTGGAGG+TGG | + | tig0025379:8402-8421 | Msa1422380:CDS | 60.0% | |
| CGATGTAGCCACGTGGAGGT+GGG | + | tig0025379:8403-8422 | Msa1422380:CDS | 60.0% | |
| GATGTAGCCACGTGGAGGTG+GGG | + | tig0025379:8404-8423 | Msa1422380:CDS | 60.0% | |
| GGATGGTGACACGTGGAAGG+TGG | + | tig0025379:8538-8557 | Msa1422380:CDS | 60.0% | |
| TGGTGACACGTGGAAGGTGG+TGG | + | tig0025379:8541-8560 | Msa1422380:CDS | 60.0% | |
| TTGCTCACGGTGGCTACCGC+CGG | - | tig0025379:7741-7760 | None:intergenic | 65.0% | |
| GCGGTAGCCACCGTGAGCAA+AGG | + | tig0025379:7741-7760 | Msa1422380:CDS | 65.0% | |
| CTCCGGACACGGCGAAACTC+CGG | - | tig0025379:7789-7808 | None:intergenic | 65.0% | |
| GCAGGGCCCACCAGGCATAT+CGG | - | tig0025379:8123-8142 | None:intergenic | 65.0% | |
| ! | CACGTGGAAGGTGGTGGCGA+AGG | + | tig0025379:8547-8566 | Msa1422380:CDS | 65.0% |
| !! | AGGTGGTGGCGAAGGTGCCT+AGG | + | tig0025379:8555-8574 | Msa1422380:CDS | 65.0% |
| !! | GGTGGTGGCGAAGGTGCCTA+GGG | + | tig0025379:8556-8575 | Msa1422380:CDS | 65.0% |
| TTGCTCACGGTGGCTACCGC+CGG | - | tig0025379:7741-7760 | None:intergenic | 65.0% | |
| GCGGTAGCCACCGTGAGCAA+AGG | + | tig0025379:7741-7760 | Msa1422380:CDS | 65.0% | |
| CTCCGGACACGGCGAAACTC+CGG | - | tig0025379:7789-7808 | None:intergenic | 65.0% | |
| GCAGGGCCCACCAGGCATAT+CGG | - | tig0025379:8123-8142 | None:intergenic | 65.0% | |
| ! | CACGTGGAAGGTGGTGGCGA+AGG | + | tig0025379:8547-8566 | Msa1422380:CDS | 65.0% |
| !! | AGGTGGTGGCGAAGGTGCCT+AGG | + | tig0025379:8555-8574 | Msa1422380:CDS | 65.0% |
| !! | GGTGGTGGCGAAGGTGCCTA+GGG | + | tig0025379:8556-8575 | Msa1422380:CDS | 65.0% |
| CGCCGGAGTTTCGCCGTGTC+CGG | + | tig0025379:7784-7803 | Msa1422380:CDS | 70.0% | |
| CGGAGTTTCGCCGTGTCCGG+AGG | + | tig0025379:7787-7806 | Msa1422380:CDS | 70.0% | |
| ! | CGCCGTGTCCGGAGGAGTAC+AGG | + | tig0025379:7795-7814 | Msa1422380:CDS | 70.0% |
| CGTTGCGGGGCCGATATGCC+TGG | + | tig0025379:8110-8129 | Msa1422380:CDS | 70.0% | |
| TGCGGGGCCGATATGCCTGG+TGG | + | tig0025379:8113-8132 | Msa1422380:CDS | 70.0% | |
| GCGGGGCCGATATGCCTGGT+GGG | + | tig0025379:8114-8133 | Msa1422380:CDS | 70.0% | |
| AGCCACGTGGAGGTGGGGTC+CGG | + | tig0025379:8409-8428 | Msa1422380:CDS | 70.0% | |
| CGCCGGAGTTTCGCCGTGTC+CGG | + | tig0025379:7784-7803 | Msa1422380:CDS | 70.0% | |
| CGGAGTTTCGCCGTGTCCGG+AGG | + | tig0025379:7787-7806 | Msa1422380:CDS | 70.0% | |
| ! | CGCCGTGTCCGGAGGAGTAC+AGG | + | tig0025379:7795-7814 | Msa1422380:CDS | 70.0% |
| CGTTGCGGGGCCGATATGCC+TGG | + | tig0025379:8110-8129 | Msa1422380:CDS | 70.0% | |
| TGCGGGGCCGATATGCCTGG+TGG | + | tig0025379:8113-8132 | Msa1422380:CDS | 70.0% | |
| GCGGGGCCGATATGCCTGGT+GGG | + | tig0025379:8114-8133 | Msa1422380:CDS | 70.0% | |
| AGCCACGTGGAGGTGGGGTC+CGG | + | tig0025379:8409-8428 | Msa1422380:CDS | 70.0% | |
| GACCGGACCCCACCTCCACG+TGG | - | tig0025379:8414-8433 | None:intergenic | 75.0% | |
| GTGGAGGTGGGGTCCGGTCG+AGG | + | tig0025379:8415-8434 | Msa1422380:CDS | 75.0% | |
| GAGGTGGGGTCCGGTCGAGG+AGG | + | tig0025379:8418-8437 | Msa1422380:CDS | 75.0% | |
| GACCGGACCCCACCTCCACG+TGG | - | tig0025379:8414-8433 | None:intergenic | 75.0% | |
| GTGGAGGTGGGGTCCGGTCG+AGG | + | tig0025379:8415-8434 | Msa1422380:CDS | 75.0% | |
| GAGGTGGGGTCCGGTCGAGG+AGG | + | tig0025379:8418-8437 | Msa1422380:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025379 | gene | 7666 | 8760 | 7666 | ID=Msa1422380;Name=Msa1422380 |
| tig0025379 | mRNA | 7666 | 8760 | 7666 | ID=Msa1422380-mRNA-1;Parent=Msa1422380;Name=Msa1422380-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|364 |
| tig0025379 | exon | 7666 | 8760 | 7666 | ID=Msa1422380-mRNA-1:exon:2554;Parent=Msa1422380-mRNA-1 |
| tig0025379 | CDS | 7666 | 8760 | 7666 | ID=Msa1422380-mRNA-1:cds;Parent=Msa1422380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
