AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1452070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1452070 MtrunA17_Chr4g0060191 97.977 1038 15 4 1 1032 1 1038 0.0 2088
Msa1452070 MtrunA17_Chr6g0461151 47.919 1081 443 22 15 1032 3 1026 0.0 964
Msa1452070 MtrunA17_Chr5g0397601 46.059 1053 480 20 18 1032 5 1007 0.0 894
Msa1452070 MtrunA17_Chr6g0460791 45.810 1050 489 19 15 1032 8 1009 0.0 882
Msa1452070 MtrunA17_Chr8g0349231 43.308 1046 515 20 18 1032 5 1003 0.0 832
Msa1452070 MtrunA17_Chr7g0258331 52.835 776 320 14 284 1032 19 775 0.0 806
Msa1452070 MtrunA17_Chr1g0174761 52.713 774 326 12 282 1032 18 774 0.0 801
Msa1452070 MtrunA17_Chr3g0087501 50.543 829 346 19 242 1032 20 822 0.0 793
Msa1452070 MtrunA17_Chr4g0010751 50.822 791 337 16 275 1032 423 1194 0.0 776
Msa1452070 MtrunA17_Chr4g0010751 42.336 137 76 2 18 154 2 135 2.00e-22 104
Msa1452070 MtrunA17_Chr4g0033151 52.493 762 312 15 297 1032 33 770 0.0 768
Msa1452070 MtrunA17_Chr1g0174581 50.522 766 332 15 297 1032 49 797 0.0 753
Msa1452070 MtrunA17_Chr4g0014711 49.542 765 335 17 297 1032 302 1044 0.0 727
Msa1452070 MtrunA17_Chr4g0014711 36.496 137 74 4 16 149 1 127 1.37e-15 82.0
Msa1452070 MtrunA17_Chr7g0247271 48.438 704 313 12 361 1032 281 966 0.0 670
Msa1452070 MtrunA17_Chr7g0247271 43.750 128 68 2 18 145 82 205 3.16e-23 106
Msa1452070 MtrunA17_Chr4g0028371 44.005 809 385 16 266 1032 1 783 0.0 615
Msa1452070 MtrunA17_Chr4g0035961 42.417 811 344 18 266 1032 1 732 0.0 583
Msa1452070 MtrunA17_Chr1g0151051 40.245 815 419 21 249 1026 9 792 7.46e-179 541
Msa1452070 MtrunA17_Chr5g0447321 36.856 776 452 15 276 1032 7 763 5.26e-155 478
Msa1452070 MtrunA17_Chr6g0461171 53.333 135 61 1 15 149 3 135 1.20e-39 146
Msa1452070 MtrunA17_Chr4g0010641 53.077 130 59 1 902 1031 1 128 1.70e-39 142
Msa1452070 MtrunA17_Chr4g0010701 37.037 108 46 1 900 1007 11 96 1.38e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1452070 AT1G74720.1 70.669 1091 249 14 3 1032 1 1081 0.0 1546
Msa1452070 AT3G03680.1 45.687 1055 496 22 14 1032 4 1017 0.0 876
Msa1452070 AT4G11610.1 44.182 1057 496 22 18 1032 7 1011 0.0 872
Msa1452070 AT4G11610.2 43.962 1060 490 22 18 1032 7 1007 0.0 872
Msa1452070 AT5G17980.1 55.200 750 306 12 297 1032 316 1049 0.0 837
Msa1452070 AT5G17980.1 56.934 137 55 3 15 149 3 137 3.21e-39 159
Msa1452070 AT5G48060.1 44.093 1075 497 26 18 1032 6 1036 0.0 833
Msa1452070 AT1G22610.1 43.611 1080 495 26 16 1032 1 1029 0.0 816
Msa1452070 AT3G57880.4 52.652 773 327 12 282 1032 18 773 0.0 806
Msa1452070 AT3G57880.2 52.652 773 327 12 282 1032 18 773 0.0 806
Msa1452070 AT3G57880.3 52.652 773 327 12 282 1032 18 773 0.0 806
Msa1452070 AT3G57880.1 52.652 773 327 12 282 1032 18 773 0.0 806
Msa1452070 AT1G51570.1 52.503 779 322 15 282 1032 18 776 0.0 799
Msa1452070 AT5G06850.1 51.876 773 326 14 289 1032 39 794 0.0 780
Msa1452070 AT5G12970.1 50.633 790 346 14 266 1032 1 769 0.0 778
Msa1452070 AT4G11610.3 47.192 837 382 15 237 1032 57 874 0.0 766
Msa1452070 AT4G00700.1 41.849 1049 529 23 18 1032 5 1006 0.0 744
Msa1452070 AT4G00700.2 41.849 1049 529 23 18 1032 5 1006 0.0 744
Msa1452070 AT1G04150.1 49.178 791 357 16 272 1032 237 1012 0.0 715
Msa1452070 AT1G04150.1 36.842 171 75 3 18 160 12 177 1.11e-22 105
Msa1452070 AT4G20080.1 48.939 754 349 14 297 1032 39 774 0.0 698
Msa1452070 AT3G61300.1 47.625 779 359 18 276 1032 221 972 0.0 695
Msa1452070 AT3G61300.1 30.814 172 108 4 18 184 6 171 1.08e-12 73.2
Msa1452070 AT3G61720.1 34.893 791 431 24 297 1032 34 795 3.14e-125 401
Msa1452070 AT5G03435.1 36.538 780 420 24 276 1026 7 740 1.15e-124 398
Msa1452070 AT5G03435.2 37.629 582 306 17 276 832 7 556 1.21e-99 325
Msa1452070 AT5G44760.1 39.459 370 180 10 297 658 31 364 2.46e-68 237
Msa1452070 AT5G44760.1 30.137 146 53 1 789 934 355 451 3.57e-14 77.0

Find 294 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTAGGGTTAAGCTTTA+TGG 0.105107 tig0033659:-32524 Msa1452070:CDS
GTTTATAATGATAAGAAATT+TGG 0.150072 tig0033659:-32575 Msa1452070:CDS
GGAACTTCCTTGACCATCTT+TGG 0.198935 tig0033659:+32742 None:intergenic
TCGAAACGGCTTGAAGAAAA+TGG 0.209811 tig0033659:-30629 Msa1452070:CDS
TGCAAGGGTGCAAACTGTTT+TGG 0.239098 tig0033659:-30002 Msa1452070:CDS
GGATGATGATACTGCATTTC+CGG 0.241192 tig0033659:+32107 None:intergenic
ATTAGAGTGAAGGTACAATT+AGG 0.242637 tig0033659:-31363 Msa1452070:CDS
ATTCTTGAACTTGGAATCTT+AGG 0.246117 tig0033659:-30973 Msa1452070:CDS
CGTTTCTGACCCGGAGAATA+TGG 0.261356 tig0033659:-32621 Msa1452070:CDS
AAAATGGTTGCTGTGGCTTT+AGG 0.266507 tig0033659:-29857 Msa1452070:CDS
GTTCCATTCCGGCGAGTCAT+TGG 0.269436 tig0033659:+31797 None:intergenic
CGCCAATCTTCTCACCGTTT+GGG 0.269793 tig0033659:+32796 None:intergenic
CTATTCAGTGCCTCCTAAAA+TGG 0.270464 tig0033659:-29873 Msa1452070:CDS
CCGCCAATCTTCTCACCGTT+TGG 0.293001 tig0033659:+32795 None:intergenic
GAAGCTATCCGTTACGGTTC+GGG 0.294645 tig0033659:+30855 None:intergenic
TAGCTCCAAACCACCTGATT+TGG 0.312359 tig0033659:-30059 Msa1452070:CDS
TACTTTACTTGGTCCTTGTT+TGG 0.312550 tig0033659:-30243 Msa1452070:CDS
CACAAGTTCATATCCATTAC+TGG 0.313298 tig0033659:-30659 Msa1452070:CDS
GCATCTGAACTCCATGCTTC+TGG 0.314338 tig0033659:+31513 None:intergenic
TTTATAATGATAAGAAATTT+GGG 0.320068 tig0033659:-32574 Msa1452070:CDS
TGAAGAGGGAAGAGTTTATC+AGG 0.320697 tig0033659:-32267 Msa1452070:CDS
TTCACCGCGAGTGGTGGTTT+TGG 0.325194 tig0033659:-32201 Msa1452070:CDS
GATCAAAGCCCGCGAGTTAT+AGG 0.327596 tig0033659:-31830 Msa1452070:CDS
GTCCCACCGCGAAATCTCTA+TGG 0.335869 tig0033659:-31011 Msa1452070:CDS
CGCTCTTCCTCCGGCGGCGG+TGG 0.336230 tig0033659:+32347 None:intergenic
CCAGTTGGAATTCTTGAACT+TGG 0.337278 tig0033659:-30982 Msa1452070:CDS
TGAAGCAAAACCGTTGTAAC+TGG 0.339352 tig0033659:+30268 None:intergenic
CATTGGCTCAACTAGATCAT+AGG 0.341441 tig0033659:+31947 None:intergenic
TTCTTCCCGGAGATATCTTT+CGG 0.343600 tig0033659:+31999 None:intergenic
CAAACCACCTGATTTGGTTC+GGG 0.345778 tig0033659:-30053 Msa1452070:CDS
TGATACTGCATTTCCGGTTC+CGG 0.346606 tig0033659:+32113 None:intergenic
TCCGAATCTACCACCGTTAA+CGG 0.347466 tig0033659:-31394 Msa1452070:CDS
CCAAACCACCTGATTTGGTT+CGG 0.347773 tig0033659:-30054 Msa1452070:CDS
CTTGACCATCTTTGGGAAGA+AGG 0.353604 tig0033659:+32750 None:intergenic
GACTTCCTAGTTTGTCTGAT+AGG 0.354170 tig0033659:-29766 Msa1452070:CDS
TTAGAGTGAAGGTACAATTA+GGG 0.357179 tig0033659:-31362 Msa1452070:CDS
TTCAAACTAGCCGGAGGCAT+TGG 0.363926 tig0033659:+29800 None:intergenic
GCGATATTCAGCTTTCTGTT+TGG 0.366513 tig0033659:-31563 Msa1452070:CDS
TCCATACCAGCTGGTATCTT+GGG 0.370566 tig0033659:+30148 None:intergenic
CGAAGCTATCCGTTACGGTT+CGG 0.376428 tig0033659:+30854 None:intergenic
GAACTTCCTTGACCATCTTT+GGG 0.376568 tig0033659:+32743 None:intergenic
CCGGGTTGAGTTCTTTGAAC+CGG 0.378404 tig0033659:+32669 None:intergenic
TCTTACTGTGTGGCCAAGTA+TGG 0.380462 tig0033659:-30895 Msa1452070:CDS
AATTCTTCATCTAATTCATC+TGG 0.381375 tig0033659:+30094 None:intergenic
CCAGATTTAATTGTTCCAAC+CGG 0.383775 tig0033659:-30217 Msa1452070:CDS
ATCTTCGTCATCCAATGTTT+AGG 0.384224 tig0033659:-29826 Msa1452070:CDS
CGGCGAGTCATTGGGTTCGT+TGG 0.386763 tig0033659:+31806 None:intergenic
TGTGGAGCAAGAGGACTATC+TGG 0.387121 tig0033659:+31639 None:intergenic
ATCCATACCAGCTGGTATCT+TGG 0.392091 tig0033659:+30147 None:intergenic
CTAATCTCCGGCGCCGTTAA+CGG 0.392366 tig0033659:+31381 None:intergenic
GCCAAATGGTTCCCGTTAGA+AGG 0.393717 tig0033659:-31126 Msa1452070:CDS
TCAAAGAACTCAACCCGGTT+TGG 0.395220 tig0033659:-32664 Msa1452070:CDS
TACGTTGGAGATTTCCGTTT+GGG 0.396619 tig0033659:-31730 Msa1452070:CDS
TCCACTTGGTGTGGCCCAAC+AGG 0.398673 tig0033659:-30506 Msa1452070:CDS
TTCCATTCCGGCGAGTCATT+GGG 0.402135 tig0033659:+31798 None:intergenic
GTAGATTCGGAGTTAGATTC+AGG 0.403572 tig0033659:+31406 None:intergenic
CCGGTTGGAACAATTAAATC+TGG 0.406243 tig0033659:+30217 None:intergenic
TTTATCAATCACCGAAGCTT+TGG 0.407372 tig0033659:-31461 Msa1452070:CDS
AGAGCTACAAAATTGTTCAT+TGG 0.408099 tig0033659:-29923 Msa1452070:CDS
TCACCATTACCGTTACCATT+AGG 0.411334 tig0033659:+32029 None:intergenic
CCGAACCAAATCAGGTGGTT+TGG 0.414261 tig0033659:+30054 None:intergenic
GGGTTCAAGCATTGGTTAGT+TGG 0.416297 tig0033659:-29955 Msa1452070:CDS
GAATTGTGGCAGTGTTAGCT+TGG 0.418307 tig0033659:-30339 Msa1452070:CDS
GGCGAGTCATTGGGTTCGTT+GGG 0.418426 tig0033659:+31807 None:intergenic
TTTGCTTCATATACTTTACT+TGG 0.418669 tig0033659:-30254 Msa1452070:CDS
CACCTACGCCTCTGTTTAGA+AGG 0.419906 tig0033659:-31081 Msa1452070:CDS
GCGGTTCGGTTCGCTTGCCC+CGG 0.422998 tig0033659:-30592 Msa1452070:CDS
CCGTAGGTGTATTTGACAAC+TGG 0.423400 tig0033659:-30774 Msa1452070:CDS
AGGTTCGAACCTTCACAAAC+GGG 0.425099 tig0033659:+31868 None:intergenic
AAATCCAAGGGTCCAGGAAA+AGG 0.425305 tig0033659:-30928 Msa1452070:CDS
ACCTTCTAACGGGAACCATT+TGG 0.426014 tig0033659:+31125 None:intergenic
TTGTAGAGGTGAAGAAGCTT+TGG 0.428883 tig0033659:-32489 Msa1452070:CDS
TAACGAACCCGAACCAAATC+AGG 0.429394 tig0033659:+30046 None:intergenic
TCGAAGTCCGCCACCACGTA+AGG 0.430336 tig0033659:+32716 None:intergenic
CGCGGTGAAGGAGGACCGTC+AGG 0.430588 tig0033659:+32215 None:intergenic
TCAAGCAACTCGTTCCAAAC+CGG 0.432570 tig0033659:+32650 None:intergenic
GAGGTTCGAACCTTCACAAA+CGG 0.432902 tig0033659:+31867 None:intergenic
GCCGTTAACGGTGGTAGATT+CGG 0.433227 tig0033659:+31393 None:intergenic
GTTTGAAGAGCTTGAAGTTG+AGG 0.433946 tig0033659:-32597 Msa1452070:CDS
GCGGGAGATGTACGCTCAAC+CGG 0.439542 tig0033659:-32132 Msa1452070:CDS
CCACTGAGCTACCATCTTAG+TGG 0.440567 tig0033659:+30465 None:intergenic
CTACGTTGGAGATTTCCGTT+TGG 0.447066 tig0033659:-31731 Msa1452070:CDS
TGCCACAATTCTAAACCAAT+TGG 0.447859 tig0033659:+30351 None:intergenic
TTCACCGTTAGGTTTCTTCC+CGG 0.448220 tig0033659:+31986 None:intergenic
CGGGTTGAGTTCTTTGAACC+GGG 0.451300 tig0033659:+32670 None:intergenic
AGTTGGATTAGAGGTGAAAT+CGG 0.452238 tig0033659:-32434 Msa1452070:CDS
GCAGTGTTAGCTTGGGCTGT+TGG 0.454236 tig0033659:-30331 Msa1452070:CDS
AAGATTATGAAAAGACCTAA+TGG 0.454725 tig0033659:-32044 Msa1452070:CDS
TGGGGCGGTCCTTGTTGAAA+CGG 0.456111 tig0033659:+32815 None:intergenic
GATGTACGCTCAACCGGAAC+CGG 0.457522 tig0033659:-32126 Msa1452070:CDS
CAGTCACAGGCATCCGATGA+TGG 0.462725 tig0033659:-32291 Msa1452070:CDS
AAATCAGGTGGTTTGGAGCT+AGG 0.462960 tig0033659:+30061 None:intergenic
TCAAACTAGCCGGAGGCATT+GGG 0.463156 tig0033659:+29801 None:intergenic
TCAACAAGATCCACCGTTGC+GGG 0.465205 tig0033659:-32150 Msa1452070:CDS
ACCCAAGATACCAGCTGGTA+TGG 0.466006 tig0033659:-30149 Msa1452070:CDS
TGATAAACCGCACATGTGTC+AGG 0.466189 tig0033659:+30562 None:intergenic
ATCCTCTCAGTTTCACCGTT+AGG 0.468825 tig0033659:+31975 None:intergenic
GTCCGCCACCACGTAAGGGC+TGG 0.472594 tig0033659:+32721 None:intergenic
AGCCAATTGGTTTAGAATTG+TGG 0.473301 tig0033659:-30353 Msa1452070:CDS
GCAAGAACAACCACCGCCGC+CGG 0.473843 tig0033659:-32357 Msa1452070:CDS
CAAAACGCCGGTAGAGTCTC+CGG 0.474134 tig0033659:-31585 Msa1452070:CDS
TGAGGAAAAGTAAAGCCAAT+TGG 0.477748 tig0033659:-30366 Msa1452070:CDS
TGCCGCTCTTCCTCCGGCGG+CGG 0.477763 tig0033659:+32344 None:intergenic
CTGGTATCTTGGGTCTAAAA+CGG 0.482340 tig0033659:+30158 None:intergenic
TTTGGAAGAATCACCTTCTC+CGG 0.482881 tig0033659:-32183 Msa1452070:CDS
AATTGTGGCAGTGTTAGCTT+GGG 0.483059 tig0033659:-30338 Msa1452070:CDS
ACAAACGGGCTTTCAGTTGG+AGG 0.483162 tig0033659:+31882 None:intergenic
CGCAACCTTCTTCCCAAAGA+TGG 0.483543 tig0033659:-32755 Msa1452070:CDS
TTATGACAGGTTAAGAATGT+TGG 0.484006 tig0033659:-30026 Msa1452070:CDS
AGTATCATCATCCTGAGGTT+AGG 0.486647 tig0033659:-32097 Msa1452070:CDS
AAGAAATTTGGGAATGGTAG+TGG 0.487221 tig0033659:-32563 Msa1452070:CDS
CTATCTGGAGAATCACGAAT+AGG 0.489424 tig0033659:+31654 None:intergenic
CTGGCGTATGTTTGCTGATG+TGG 0.491272 tig0033659:-30755 Msa1452070:CDS
AGTAGGACCCACCTTCTAAC+GGG 0.492134 tig0033659:+31115 None:intergenic
ACTCACATGCTTGGAGTATG+AGG 0.492503 tig0033659:-30384 Msa1452070:CDS
CCAAGTTCAAGAATTCCAAC+TGG 0.494458 tig0033659:+30982 None:intergenic
AGACCTAATGGTAACGGTAA+TGG 0.494922 tig0033659:-32032 Msa1452070:CDS
GCCCCAAACGGTGAGAAGAT+TGG 0.495143 tig0033659:-32798 Msa1452070:CDS
TCTTCAAACTCCATATTCTC+CGG 0.496145 tig0033659:+32611 None:intergenic
TACAGCAAAACCGATGCAAC+CGG 0.497708 tig0033659:-31756 Msa1452070:CDS
CGAAACGGCTTGAAGAAAAT+GGG 0.497923 tig0033659:-30628 Msa1452070:CDS
TCACCTACAGAGCAATTTCT+CGG 0.498901 tig0033659:-31705 Msa1452070:CDS
GAGTTCTTTGAACCGGGTGG+TGG 0.498996 tig0033659:+32676 None:intergenic
CCTGGACCCTTGGATTTCAT+CGG 0.499593 tig0033659:+30934 None:intergenic
GGCATTGGGTTCCTAAACAT+TGG 0.499655 tig0033659:+29815 None:intergenic
CACCGCCGCCGGAGGAAGAG+CGG 0.500632 tig0033659:-32346 Msa1452070:CDS
ACCGCCACGTGCCAGCCAAA+TGG 0.504191 tig0033659:-31140 Msa1452070:CDS
GAGTAACGCCGCTTCCTTGG+TGG 0.505058 tig0033659:+31209 None:intergenic
TTCACAAACGGGCTTTCAGT+TGG 0.506939 tig0033659:+31879 None:intergenic
TGAGTTCATCGTTTCTGACC+CGG 0.506939 tig0033659:-32630 Msa1452070:CDS
GTTAAGAATGTTGGCTGCAA+GGG 0.506997 tig0033659:-30017 Msa1452070:CDS
CGGTTCGGTTCGCTTGCCCC+GGG 0.508247 tig0033659:-30591 Msa1452070:CDS
TTACTGGTTCTGACTCGAAA+CGG 0.508290 tig0033659:-30643 Msa1452070:CDS
GGGCTGTTGGATTAGCTAAG+TGG 0.510508 tig0033659:-30318 Msa1452070:CDS
CTTCGGTGATTGATAAACCT+TGG 0.511460 tig0033659:+31467 None:intergenic
AATCCAAGGGTCCAGGAAAA+GGG 0.514447 tig0033659:-30927 Msa1452070:CDS
AGGTGAGAGGGTTCAAGCAT+TGG 0.514905 tig0033659:-29963 Msa1452070:CDS
AACCCAATGACTCGCCGGAA+TGG 0.515956 tig0033659:-31800 Msa1452070:CDS
AGTTTATCAGGTTGAACAGA+TGG 0.517807 tig0033659:-32255 Msa1452070:CDS
CAGATTTAATTGTTCCAACC+GGG 0.519192 tig0033659:-30216 Msa1452070:CDS
CTCTGTAGGTGAATCCCAAA+CGG 0.519575 tig0033659:+31716 None:intergenic
ATTCAGCTTTCTGTTTGGAT+CGG 0.520990 tig0033659:-31558 Msa1452070:CDS
TCACCGTGCCGCTCTTCCTC+CGG 0.523528 tig0033659:+32338 None:intergenic
GTTTAGGAACCCAATGCCTC+CGG 0.524667 tig0033659:-29810 Msa1452070:CDS
TGCTTCTGGAAAAGCGTCGT+CGG 0.525056 tig0033659:+31527 None:intergenic
TTCCAGCCCTTACGTGGTGG+CGG 0.525448 tig0033659:-32723 Msa1452070:CDS
TCCTCCTTCACCGCGAGTGG+TGG 0.527371 tig0033659:-32207 Msa1452070:CDS
TGGTTCGGGTTCGTTATGAC+AGG 0.530679 tig0033659:-30039 Msa1452070:CDS
CAACGTAGCACCGGTTGCAT+CGG 0.530953 tig0033659:+31746 None:intergenic
ACTTGGTGTGGCCCAACAGG+AGG 0.534698 tig0033659:-30503 Msa1452070:CDS
AACTGAAAGCCCGTTTGTGA+AGG 0.535146 tig0033659:-31877 Msa1452070:CDS
TGATCTGACGTAGTGACTTG+AGG 0.535682 tig0033659:+31848 None:intergenic
CAAGCAACTCGTTCCAAACC+GGG 0.536644 tig0033659:+32651 None:intergenic
ACTCTCAGATACCAAAGCTT+CGG 0.537168 tig0033659:+31450 None:intergenic
TGGATGCTGACTCACATGCT+TGG 0.537691 tig0033659:-30393 Msa1452070:CDS
TCAACAAGGACCGCCCCAAA+CGG 0.540444 tig0033659:-32810 Msa1452070:CDS
GAAGGAGGACCGTCAGGAAG+TGG 0.540621 tig0033659:+32221 None:intergenic
CCGATGAAATCCAAGGGTCC+AGG 0.541851 tig0033659:-30934 Msa1452070:CDS
CCGCCGAGAAATTGCTCTGT+AGG 0.542679 tig0033659:+31702 None:intergenic
ACCACAGCATGTCGTTTCAC+TGG 0.543586 tig0033659:-31302 Msa1452070:CDS
GTTAGAATCGTGAAAGTTCG+CGG 0.544298 tig0033659:-31912 Msa1452070:CDS
GCCTCCTAAAATGGTTGCTG+TGG 0.544475 tig0033659:-29864 Msa1452070:CDS
CTTGGAATCTTAGGCGCTCG+TGG 0.546490 tig0033659:-30964 Msa1452070:CDS
TCTTGTTGAACACGAACTAC+CGG 0.547815 tig0033659:+32164 None:intergenic
AGGTTTCCATAGAGATTTCG+CGG 0.548210 tig0033659:+31005 None:intergenic
AACGGTGAGAAGATTGGCGG+TGG 0.548470 tig0033659:-32792 Msa1452070:CDS
CTTCCCTCTTCACCCATCAT+CGG 0.549244 tig0033659:+32278 None:intergenic
TATGCTCCGAAAGATATCTC+CGG 0.549809 tig0033659:-32005 Msa1452070:CDS
TTCGTTGGGCCTATAACTCG+CGG 0.549831 tig0033659:+31821 None:intergenic
GCCCAACAGGAGGCTTTACG+CGG 0.551222 tig0033659:-30493 Msa1452070:CDS
CTTCTAAACAGAGGCGTAGG+TGG 0.551291 tig0033659:+31082 None:intergenic
TCTCTATGGAAACCTCCAGT+TGG 0.551296 tig0033659:-30997 Msa1452070:CDS
GGTTAAGAATGTTGGCTGCA+AGG 0.551608 tig0033659:-30018 Msa1452070:CDS
CGAGGTTGTTCGATACATGT+TGG 0.551957 tig0033659:-30413 Msa1452070:CDS
CTTCAAACTCCATATTCTCC+GGG 0.552338 tig0033659:+32612 None:intergenic
TTTCGAGTCAGAACCAGTAA+TGG 0.553602 tig0033659:+30646 None:intergenic
ATGCACTACATTCGTCCACT+TGG 0.553610 tig0033659:-30520 Msa1452070:CDS
ATTGGCTCAACTAGATCATA+GGG 0.554019 tig0033659:+31948 None:intergenic
AGAACAACCACCGCCGCCGG+AGG 0.554031 tig0033659:-32354 Msa1452070:CDS
GCCAATCTTCTCACCGTTTG+GGG 0.556670 tig0033659:+32797 None:intergenic
GGTTAGATGATATAAGAAGA+TGG 0.557390 tig0033659:-30297 Msa1452070:CDS
AATGATAAGAAATTTGGGAA+TGG 0.559099 tig0033659:-32569 Msa1452070:CDS
CATCCGATGATGGGTGAAGA+GGG 0.559487 tig0033659:-32281 Msa1452070:CDS
ATGCTCCGAAAGATATCTCC+GGG 0.560148 tig0033659:-32004 Msa1452070:CDS
CGATGCAACCGGTGCTACGT+TGG 0.560184 tig0033659:-31745 Msa1452070:CDS
AACAGAAAGCTGAATATCGC+CGG 0.560266 tig0033659:+31566 None:intergenic
AAAACCACCACTCGCGGTGA+AGG 0.560550 tig0033659:+32203 None:intergenic
TCCTGTTGGGCCACACCAAG+TGG 0.560701 tig0033659:+30505 None:intergenic
AGATCGCACCACCAAGGAAG+CGG 0.562726 tig0033659:-31217 Msa1452070:CDS
GAAGATCTTCTCTTCGTCGC+CGG 0.563391 tig0033659:-31276 Msa1452070:CDS
CGAACAACCTCGTGCCCCAT+CGG 0.563726 tig0033659:+30424 None:intergenic
GCATCCGATGATGGGTGAAG+AGG 0.563834 tig0033659:-32282 Msa1452070:CDS
AGAGGAACAATCACAGTCAC+AGG 0.565907 tig0033659:-32304 Msa1452070:CDS
GGTCAGAACCCGAACCGTAA+CGG 0.565952 tig0033659:-30863 Msa1452070:CDS
GAGCGAGTGTGTGCCACGTA+TGG 0.566668 tig0033659:+31489 None:intergenic
ACGGTGACGCAGAGCAAGAG+AGG 0.567067 tig0033659:-32322 Msa1452070:CDS
TTCCATAGAGATTTCGCGGT+GGG 0.569256 tig0033659:+31009 None:intergenic
TGTACTGTTCGTTCCACCGT+GGG 0.569348 tig0033659:+30830 None:intergenic
AGTCACAGGCATCCGATGAT+GGG 0.570113 tig0033659:-32290 Msa1452070:CDS
CCTTGCACTGTCTTAACCGT+AGG 0.571276 tig0033659:-30790 Msa1452070:CDS
TTTAGACCCAAGATACCAGC+TGG 0.572276 tig0033659:-30154 Msa1452070:CDS
CAGTAGGACCCACCTTCTAA+CGG 0.572682 tig0033659:+31114 None:intergenic
TCTACCACCGTTAACGGCGC+CGG 0.574432 tig0033659:-31388 Msa1452070:CDS
TCTAACGGGAACCATTTGGC+TGG 0.574894 tig0033659:+31129 None:intergenic
AAATGGTTCCCGTTAGAAGG+TGG 0.575886 tig0033659:-31123 Msa1452070:CDS
TTAGAAGGTGGGTCCTACTG+TGG 0.577831 tig0033659:-31111 Msa1452070:CDS
TAAGATGGTAGCTCAGTGGC+TGG 0.577993 tig0033659:-30461 Msa1452070:CDS
TGACTCGCCGGAATGGAACC+AGG 0.578461 tig0033659:-31793 Msa1452070:CDS
TGTACCTTCACTCTAATCTC+CGG 0.580661 tig0033659:+31369 None:intergenic
ACCACCACTCGCGGTGAAGG+AGG 0.581513 tig0033659:+32206 None:intergenic
CCCAACAGGAGGCTTTACGC+GGG 0.582876 tig0033659:-30492 Msa1452070:CDS
TACGTGGTGGCGGACTTCGA+CGG 0.582930 tig0033659:-32713 Msa1452070:CDS
CAACGAACCCAATGACTCGC+CGG 0.583064 tig0033659:-31805 Msa1452070:CDS
TTAGAATCGTGAAAGTTCGC+GGG 0.583787 tig0033659:-31911 Msa1452070:CDS
CGGTACCATTGTGGAGCAAG+AGG 0.584297 tig0033659:+31630 None:intergenic
AATGGGTGAAATCGAGTTAG+CGG 0.585887 tig0033659:-30611 Msa1452070:CDS
CTAACAAACAGATACTGCAT+TGG 0.588778 tig0033659:+31930 None:intergenic
AATCTTGTATCCATACCAGC+TGG 0.589612 tig0033659:+30139 None:intergenic
CGTGGCACACACTCGCTCCA+AGG 0.590638 tig0033659:-31484 Msa1452070:CDS
TGAACACGAACTACCGGAGA+AGG 0.591102 tig0033659:+32170 None:intergenic
CAATCACAGAGAACAAGAAG+AGG 0.591111 tig0033659:-31336 Msa1452070:CDS
AATCTTCTCACCGTTTGGGG+CGG 0.592507 tig0033659:+32800 None:intergenic
AGAGCCTCCGATGGGGCACG+AGG 0.594720 tig0033659:-30431 Msa1452070:CDS
CTACATTCGTCCACTTGGTG+TGG 0.594829 tig0033659:-30515 Msa1452070:CDS
GGAAATCTCCAACGTAGCAC+CGG 0.596844 tig0033659:+31737 None:intergenic
GGAATCTTCTAGTGGCTCAC+CGG 0.597195 tig0033659:+31257 None:intergenic
ATGAAAAGACCTAATGGTAA+CGG 0.599466 tig0033659:-32038 Msa1452070:CDS
TTATCACGTGCTTGATGAAG+CGG 0.601621 tig0033659:-31055 Msa1452070:CDS
AATATCGCCGGAGACTCTAC+CGG 0.601828 tig0033659:+31578 None:intergenic
TTCAACAAGATCCACCGTTG+CGG 0.602303 tig0033659:-32151 Msa1452070:CDS
ATCAACCTATCAGACAAACT+AGG 0.603071 tig0033659:+29761 None:intergenic
ATCTTCTACGAGAAGGACCA+TGG 0.603592 tig0033659:+31236 None:intergenic
TAGAAGGTGGGTCCTACTGT+GGG 0.603855 tig0033659:-31110 Msa1452070:CDS
CCACAATGGTACCGTCTCGA+AGG 0.605104 tig0033659:-31621 Msa1452070:CDS
GTGAAATCGAGTTAGCGGTT+CGG 0.605145 tig0033659:-30606 Msa1452070:CDS
AATGGTTCCCGTTAGAAGGT+GGG 0.608687 tig0033659:-31122 Msa1452070:CDS
AGTTCAAGAATTCCAACTGG+AGG 0.611937 tig0033659:+30985 None:intergenic
CCAAACGGTGAGAAGATTGG+CGG 0.612320 tig0033659:-32795 Msa1452070:CDS
TGGGTCGAAGCTATCCGTTA+CGG 0.615070 tig0033659:+30849 None:intergenic
ACCATTTGGCTGGCACGTGG+CGG 0.615125 tig0033659:+31139 None:intergenic
CCTTCGAGACGGTACCATTG+TGG 0.615235 tig0033659:+31621 None:intergenic
CTACGCCTCTGTTTAGAAGG+TGG 0.615741 tig0033659:-31078 Msa1452070:CDS
GGCCACACAGTAAGAATCAG+TGG 0.616175 tig0033659:+30903 None:intergenic
TGAGCCACTAGAAGATTCCA+TGG 0.617345 tig0033659:-31253 Msa1452070:CDS
AGAGAAAACGAACCACCACC+CGG 0.617915 tig0033659:-32688 Msa1452070:CDS
CTGCTGCGCCACCTTCGAGA+CGG 0.618995 tig0033659:+31610 None:intergenic
CAATGGTACCGTCTCGAAGG+TGG 0.621124 tig0033659:-31618 Msa1452070:CDS
CCGCCGGAGGAAGAGCGGCA+CGG 0.621514 tig0033659:-32341 Msa1452070:CDS
TGGTGCGATCTTCTACGAGA+AGG 0.622059 tig0033659:+31229 None:intergenic
GAACGAACAGTACACATGGC+AGG 0.622431 tig0033659:-30821 Msa1452070:CDS
CTTCTTCCCAAAGATGGTCA+AGG 0.623665 tig0033659:-32749 Msa1452070:CDS
AGGAAGTTCCAGCCCTTACG+TGG 0.623834 tig0033659:-32729 Msa1452070:CDS
TAACGGATAGCTTCGACCCA+CGG 0.625339 tig0033659:-30846 Msa1452070:CDS
CATTGTGTGCCACTTCCTGA+CGG 0.625959 tig0033659:-32230 Msa1452070:CDS
TCTTCTTCCGATGAAATCCA+AGG 0.627021 tig0033659:-30941 Msa1452070:CDS
CTTCTTCCGATGAAATCCAA+GGG 0.628802 tig0033659:-30940 Msa1452070:CDS
GGAACCATTTGGCTGGCACG+TGG 0.629535 tig0033659:+31136 None:intergenic
TGAGCGTACATCTCCCGCAA+CGG 0.631429 tig0033659:+32137 None:intergenic
GGCGCCGGAGATTAGAGTGA+AGG 0.631671 tig0033659:-31373 Msa1452070:CDS
GTATCTGAGAGTAACAGTCA+TGG 0.631794 tig0033659:-31439 Msa1452070:CDS
TAGGTGGACTCTCCCACAGT+AGG 0.634184 tig0033659:+31098 None:intergenic
CCAGTTGTCAAATACACCTA+CGG 0.635674 tig0033659:+30774 None:intergenic
CCTACGGTTAAGACAGTGCA+AGG 0.636191 tig0033659:+30790 None:intergenic
CCGGTTCAAAGAACTCAACC+CGG 0.636336 tig0033659:-32669 Msa1452070:CDS
AACCTAACGGTGAAACTGAG+AGG 0.639805 tig0033659:-31977 Msa1452070:CDS
ATCTCCGGCGCCGTTAACGG+TGG 0.640916 tig0033659:+31384 None:intergenic
TCTTCCAAAACCACCACTCG+CGG 0.641790 tig0033659:+32197 None:intergenic
GCCAGTGAAACGACATGCTG+TGG 0.643248 tig0033659:+31301 None:intergenic
GCGTACATCTCCCGCAACGG+TGG 0.645515 tig0033659:+32140 None:intergenic
GCAACGACGCCGTTTCAACA+AGG 0.650190 tig0033659:-32824 Msa1452070:CDS
GTGTACTGTTCGTTCCACCG+TGG 0.657085 tig0033659:+30829 None:intergenic
GTTGAGTTCTTTGAACCGGG+TGG 0.658782 tig0033659:+32673 None:intergenic
AAGTTCCAGCCCTTACGTGG+TGG 0.659152 tig0033659:-32726 Msa1452070:CDS
AGTGAAACGACATGCTGTGG+TGG 0.659402 tig0033659:+31304 None:intergenic
TCTCGATGAGACTATGAACA+TGG 0.660012 tig0033659:-32846 None:intergenic
GAGTTCAGATGCACCATACG+TGG 0.662296 tig0033659:-31502 Msa1452070:CDS
ATAGTCCTCTTGCTCCACAA+TGG 0.663046 tig0033659:-31635 Msa1452070:CDS
AGGACCATGGAATCTTCTAG+TGG 0.663292 tig0033659:+31249 None:intergenic
ATCTCCGGGAAGAAACCTAA+CGG 0.664237 tig0033659:-31990 Msa1452070:CDS
GTCCACTGATTCTTACTGTG+TGG 0.665645 tig0033659:-30905 Msa1452070:CDS
CACCTTCTAAACAGAGGCGT+AGG 0.667135 tig0033659:+31079 None:intergenic
CCGTGCCGCTCTTCCTCCGG+CGG 0.669362 tig0033659:+32341 None:intergenic
CGTAGAAGATCGCACCACCA+AGG 0.672290 tig0033659:-31223 Msa1452070:CDS
TTAGGAAAATGCAAACAATG+AGG 0.676561 tig0033659:-32079 Msa1452070:CDS
GGCGCAGCAGAACAAAACGC+CGG 0.688834 tig0033659:-31597 Msa1452070:CDS
CGAACCCGAACCAAATCAGG+TGG 0.692684 tig0033659:+30049 None:intergenic
CCACTAAGATGGTAGCTCAG+TGG 0.696907 tig0033659:-30465 Msa1452070:CDS
TTAAATCTGGATACCAAACA+AGG 0.703911 tig0033659:+30230 None:intergenic
GGTGGAACGAACAGTACACA+TGG 0.706630 tig0033659:-30825 Msa1452070:CDS
AATGCAGTATCATCATCCTG+AGG 0.736779 tig0033659:-32102 Msa1452070:CDS
ACGTCAGAGGAATGACGACG+TGG 0.737375 tig0033659:+31184 None:intergenic
CCTACAGAGCAATTTCTCGG+CGG 0.742223 tig0033659:-31702 Msa1452070:CDS
GATAACCACCTTCTAAACAG+AGG 0.746597 tig0033659:+31073 None:intergenic
TTTCCATAGAGATTTCGCGG+TGG 0.768966 tig0033659:+31008 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAATGATAAGAAATTT+GGG - tig0033659:30016-30035 Msa1452070:CDS 10.0%
!! GTTTATAATGATAAGAAATT+TGG - tig0033659:30015-30034 Msa1452070:CDS 15.0%
!!! TTTTTATATGTTGTTTTGAT+TGG - tig0033659:32397-32416 Msa1452070:CDS 15.0%
! AATGATAAGAAATTTGGGAA+TGG - tig0033659:30021-30040 Msa1452070:CDS 25.0%
! AAGATTATGAAAAGACCTAA+TGG - tig0033659:30546-30565 Msa1452070:CDS 25.0%
!! GTATACGAATTTTACCTATA+CGG + tig0033659:31880-31899 None:intergenic 25.0%
! TTTGCTTCATATACTTTACT+TGG - tig0033659:32336-32355 Msa1452070:CDS 25.0%
! CAAAACAACATATAAAAACC+CGG + tig0033659:32395-32414 None:intergenic 25.0%
!!! ATGTTGTTTTGATTGGAATA+TGG - tig0033659:32404-32423 Msa1452070:CDS 25.0%
! AATTCTTCATCTAATTCATC+TGG + tig0033659:32499-32518 None:intergenic 25.0%
! CAAGAATCATTTTCTTGGTA+GGG - tig0033659:30053-30072 Msa1452070:CDS 30.0%
!!! AGAAGAAAAGTGTTTTCAGT+TGG - tig0033659:30139-30158 Msa1452070:CDS 30.0%
TTAGGAAAATGCAAACAATG+AGG - tig0033659:30511-30530 Msa1452070:CDS 30.0%
ATGAAAAGACCTAATGGTAA+CGG - tig0033659:30552-30571 Msa1452070:CDS 30.0%
! ATTAGAGTGAAGGTACAATT+AGG - tig0033659:31227-31246 Msa1452070:CDS 30.0%
! TTAGAGTGAAGGTACAATTA+GGG - tig0033659:31228-31247 Msa1452070:CDS 30.0%
ATTCTTGAACTTGGAATCTT+AGG - tig0033659:31617-31636 Msa1452070:CDS 30.0%
!! TAGTGCATTTTTGGAAGTAA+TGG + tig0033659:32058-32077 None:intergenic 30.0%
GGTTAGATGATATAAGAAGA+TGG - tig0033659:32293-32312 Msa1452070:CDS 30.0%
ATGGAAAAATCCAGTTACAA+CGG - tig0033659:32312-32331 Msa1452070:CDS 30.0%
TTAAATCTGGATACCAAACA+AGG + tig0033659:32363-32382 None:intergenic 30.0%
TTATGACAGGTTAAGAATGT+TGG - tig0033659:32564-32583 Msa1452070:CDS 30.0%
! TGAACAATTTTGTAGCTCTT+GGG + tig0033659:32666-32685 None:intergenic 30.0%
! ATGAACAATTTTGTAGCTCT+TGG + tig0033659:32667-32686 None:intergenic 30.0%
AGAGCTACAAAATTGTTCAT+TGG - tig0033659:32667-32686 Msa1452070:CDS 30.0%
TCTTCAAACTCCATATTCTC+CGG + tig0033659:29982-30001 None:intergenic 35.0%
AAGAAATTTGGGAATGGTAG+TGG - tig0033659:30027-30046 Msa1452070:CDS 35.0%
! GCAAGAATCATTTTCTTGGT+AGG - tig0033659:30052-30071 Msa1452070:CDS 35.0%
!! AGTGTTTTCAGTTGGATTAG+AGG - tig0033659:30147-30166 Msa1452070:CDS 35.0%
! AGTTGGATTAGAGGTGAAAT+CGG - tig0033659:30156-30175 Msa1452070:CDS 35.0%
!! AGTTTATCAGGTTGAACAGA+TGG - tig0033659:30335-30354 Msa1452070:CDS 35.0%
! ATTGGCTCAACTAGATCATA+GGG + tig0033659:30645-30664 None:intergenic 35.0%
CTAACAAACAGATACTGCAT+TGG + tig0033659:30663-30682 None:intergenic 35.0%
ATTCAGCTTTCTGTTTGGAT+CGG - tig0033659:31032-31051 Msa1452070:CDS 35.0%
TTTATCAATCACCGAAGCTT+TGG - tig0033659:31129-31148 Msa1452070:CDS 35.0%
! ATTTTACCTATACGGCAATC+TGG + tig0033659:31872-31891 None:intergenic 35.0%
CACAAGTTCATATCCATTAC+TGG - tig0033659:31931-31950 Msa1452070:CDS 35.0%
TGAGGAAAAGTAAAGCCAAT+TGG - tig0033659:32224-32243 Msa1452070:CDS 35.0%
! AGCCAATTGGTTTAGAATTG+TGG - tig0033659:32237-32256 Msa1452070:CDS 35.0%
TGCCACAATTCTAAACCAAT+TGG + tig0033659:32242-32261 None:intergenic 35.0%
TACTTTACTTGGTCCTTGTT+TGG - tig0033659:32347-32366 Msa1452070:CDS 35.0%
CCAGATTTAATTGTTCCAAC+CGG - tig0033659:32373-32392 Msa1452070:CDS 35.0%
CAGATTTAATTGTTCCAACC+GGG - tig0033659:32374-32393 Msa1452070:CDS 35.0%
ACAACATATAAAAACCCGGT+TGG + tig0033659:32391-32410 None:intergenic 35.0%
ATCTTCGTCATCCAATGTTT+AGG - tig0033659:32764-32783 Msa1452070:CDS 35.0%
CTGAAAAAGTTCAAACTAGC+CGG + tig0033659:32802-32821 None:intergenic 35.0%
ATCAACCTATCAGACAAACT+AGG + tig0033659:32832-32851 None:intergenic 35.0%
GAACTTCCTTGACCATCTTT+GGG + tig0033659:29850-29869 None:intergenic 40.0%
CTTCAAACTCCATATTCTCC+GGG + tig0033659:29981-30000 None:intergenic 40.0%
GTTTGAAGAGCTTGAAGTTG+AGG - tig0033659:29993-30012 Msa1452070:CDS 40.0%
! GGTCGCAAGAATCATTTTCT+TGG - tig0033659:30048-30067 Msa1452070:CDS 40.0%
CTTGGTAGGGTTAAGCTTTA+TGG - tig0033659:30066-30085 Msa1452070:CDS 40.0%
! GGAACACAGTTTTCTTGTAG+AGG - tig0033659:30087-30106 Msa1452070:CDS 40.0%
TTGTAGAGGTGAAGAAGCTT+TGG - tig0033659:30101-30120 Msa1452070:CDS 40.0%
TGAAGAGGGAAGAGTTTATC+AGG - tig0033659:30323-30342 Msa1452070:CDS 40.0%
TTTGGAAGAATCACCTTCTC+CGG - tig0033659:30407-30426 Msa1452070:CDS 40.0%
TCTTGTTGAACACGAACTAC+CGG + tig0033659:30429-30448 None:intergenic 40.0%
GGATGATGATACTGCATTTC+CGG + tig0033659:30486-30505 None:intergenic 40.0%
AATGCAGTATCATCATCCTG+AGG - tig0033659:30488-30507 Msa1452070:CDS 40.0%
AGTATCATCATCCTGAGGTT+AGG - tig0033659:30493-30512 Msa1452070:CDS 40.0%
! GTTTGCATTTTCCTAACCTC+AGG + tig0033659:30507-30526 None:intergenic 40.0%
!! AGACCTAATGGTAACGGTAA+TGG - tig0033659:30558-30577 Msa1452070:CDS 40.0%
TCACCATTACCGTTACCATT+AGG + tig0033659:30564-30583 None:intergenic 40.0%
TATGCTCCGAAAGATATCTC+CGG - tig0033659:30585-30604 Msa1452070:CDS 40.0%
TTCTTCCCGGAGATATCTTT+CGG + tig0033659:30594-30613 None:intergenic 40.0%
!! CATTGGCTCAACTAGATCAT+AGG + tig0033659:30646-30665 None:intergenic 40.0%
GTTAGAATCGTGAAAGTTCG+CGG - tig0033659:30678-30697 Msa1452070:CDS 40.0%
TTAGAATCGTGAAAGTTCGC+GGG - tig0033659:30679-30698 Msa1452070:CDS 40.0%
!! ATCGGTTTTGCTGTAACCAA+GGG + tig0033659:30829-30848 None:intergenic 40.0%
TACGTTGGAGATTTCCGTTT+GGG - tig0033659:30860-30879 Msa1452070:CDS 40.0%
TCACCTACAGAGCAATTTCT+CGG - tig0033659:30885-30904 Msa1452070:CDS 40.0%
CTATCTGGAGAATCACGAAT+AGG + tig0033659:30939-30958 None:intergenic 40.0%
AACAGAAAGCTGAATATCGC+CGG + tig0033659:31027-31046 None:intergenic 40.0%
GCGATATTCAGCTTTCTGTT+TGG - tig0033659:31027-31046 Msa1452070:CDS 40.0%
CTTCGGTGATTGATAAACCT+TGG + tig0033659:31126-31145 None:intergenic 40.0%
ACTCTCAGATACCAAAGCTT+CGG + tig0033659:31143-31162 None:intergenic 40.0%
GTATCTGAGAGTAACAGTCA+TGG - tig0033659:31151-31170 Msa1452070:CDS 40.0%
GTAGATTCGGAGTTAGATTC+AGG + tig0033659:31187-31206 None:intergenic 40.0%
TGTACCTTCACTCTAATCTC+CGG + tig0033659:31224-31243 None:intergenic 40.0%
CAATCACAGAGAACAAGAAG+AGG - tig0033659:31254-31273 Msa1452070:CDS 40.0%
GATAACCACCTTCTAAACAG+AGG + tig0033659:31520-31539 None:intergenic 40.0%
TTATCACGTGCTTGATGAAG+CGG - tig0033659:31535-31554 Msa1452070:CDS 40.0%
AGGTTTCCATAGAGATTTCG+CGG + tig0033659:31588-31607 None:intergenic 40.0%
AGTTCAAGAATTCCAACTGG+AGG + tig0033659:31608-31627 None:intergenic 40.0%
CCAAGTTCAAGAATTCCAAC+TGG + tig0033659:31611-31630 None:intergenic 40.0%
CCAGTTGGAATTCTTGAACT+TGG - tig0033659:31608-31627 Msa1452070:CDS 40.0%
TCTTCTTCCGATGAAATCCA+AGG - tig0033659:31649-31668 Msa1452070:CDS 40.0%
CTTCTTCCGATGAAATCCAA+GGG - tig0033659:31650-31669 Msa1452070:CDS 40.0%
TGGCCAAGTATGGCAAAAAA+TGG - tig0033659:31705-31724 Msa1452070:CDS 40.0%
GGCCAAGTATGGCAAAAAAT+GGG - tig0033659:31706-31725 Msa1452070:CDS 40.0%
!!! GACCCATTTTTTGCCATACT+TGG + tig0033659:31711-31730 None:intergenic 40.0%
CCAGTTGTCAAATACACCTA+CGG + tig0033659:31819-31838 None:intergenic 40.0%
GAAAAACCAGATTGCCGTAT+AGG - tig0033659:31863-31882 Msa1452070:CDS 40.0%
! TTTCGAGTCAGAACCAGTAA+TGG + tig0033659:31947-31966 None:intergenic 40.0%
!! TTACTGGTTCTGACTCGAAA+CGG - tig0033659:31947-31966 Msa1452070:CDS 40.0%
TCGAAACGGCTTGAAGAAAA+TGG - tig0033659:31961-31980 Msa1452070:CDS 40.0%
CGAAACGGCTTGAAGAAAAT+GGG - tig0033659:31962-31981 Msa1452070:CDS 40.0%
AATGGGTGAAATCGAGTTAG+CGG - tig0033659:31979-31998 Msa1452070:CDS 40.0%
ACATGTGTCAGGAAAAAACC+CGG + tig0033659:32020-32039 None:intergenic 40.0%
!!! GTTTTTTCCTGACACATGTG+CGG - tig0033659:32021-32040 Msa1452070:CDS 40.0%
! GGACGAATGTAGTGCATTTT+TGG + tig0033659:32067-32086 None:intergenic 40.0%
! AATTGTGGCAGTGTTAGCTT+GGG - tig0033659:32252-32271 Msa1452070:CDS 40.0%
TGAAGCAAAACCGTTGTAAC+TGG + tig0033659:32325-32344 None:intergenic 40.0%
CCGGTTGGAACAATTAAATC+TGG + tig0033659:32376-32395 None:intergenic 40.0%
CTGGTATCTTGGGTCTAAAA+CGG + tig0033659:32435-32454 None:intergenic 40.0%
AATCTTGTATCCATACCAGC+TGG + tig0033659:32454-32473 None:intergenic 40.0%
! GTTAAGAATGTTGGCTGCAA+GGG - tig0033659:32573-32592 Msa1452070:CDS 40.0%
! TTGGGTGATTTTGCAACACA+AGG - tig0033659:32607-32626 Msa1452070:CDS 40.0%
! ATTTTGCAACACAAGGTGAG+AGG - tig0033659:32614-32633 Msa1452070:CDS 40.0%
! TTTTGCAACACAAGGTGAGA+GGG - tig0033659:32615-32634 Msa1452070:CDS 40.0%
CTATTCAGTGCCTCCTAAAA+TGG - tig0033659:32717-32736 Msa1452070:CDS 40.0%
! AAAGCCACAGCAACCATTTT+AGG + tig0033659:32733-32752 None:intergenic 40.0%
AAAATGGTTGCTGTGGCTTT+AGG - tig0033659:32733-32752 Msa1452070:CDS 40.0%
AAAAAGTTCAAACTAGCCGG+AGG + tig0033659:32799-32818 None:intergenic 40.0%
! GACTTCCTAGTTTGTCTGAT+AGG - tig0033659:32824-32843 Msa1452070:CDS 40.0%
! CTTGACCATCTTTGGGAAGA+AGG + tig0033659:29843-29862 None:intergenic 45.0%
CTTCTTCCCAAAGATGGTCA+AGG - tig0033659:29841-29860 Msa1452070:CDS 45.0%
GGAACTTCCTTGACCATCTT+TGG + tig0033659:29851-29870 None:intergenic 45.0%
TCAAAGAACTCAACCCGGTT+TGG - tig0033659:29926-29945 Msa1452070:CDS 45.0%
TCAAGCAACTCGTTCCAAAC+CGG + tig0033659:29943-29962 None:intergenic 45.0%
TGAGTTCATCGTTTCTGACC+CGG - tig0033659:29960-29979 Msa1452070:CDS 45.0%
AGAGGAACAATCACAGTCAC+AGG - tig0033659:30286-30305 Msa1452070:CDS 45.0%
TTCAACAAGATCCACCGTTG+CGG - tig0033659:30439-30458 Msa1452070:CDS 45.0%
TGATACTGCATTTCCGGTTC+CGG + tig0033659:30480-30499 None:intergenic 45.0%
ATGCTCCGAAAGATATCTCC+GGG - tig0033659:30586-30605 Msa1452070:CDS 45.0%
ATCTCCGGGAAGAAACCTAA+CGG - tig0033659:30600-30619 Msa1452070:CDS 45.0%
TTCACCGTTAGGTTTCTTCC+CGG + tig0033659:30607-30626 None:intergenic 45.0%
AACCTAACGGTGAAACTGAG+AGG - tig0033659:30613-30632 Msa1452070:CDS 45.0%
ATCCTCTCAGTTTCACCGTT+AGG + tig0033659:30618-30637 None:intergenic 45.0%
! TTCACAAACGGGCTTTCAGT+TGG + tig0033659:30714-30733 None:intergenic 45.0%
AACTGAAAGCCCGTTTGTGA+AGG - tig0033659:30713-30732 Msa1452070:CDS 45.0%
AGGTTCGAACCTTCACAAAC+GGG + tig0033659:30725-30744 None:intergenic 45.0%
GAGGTTCGAACCTTCACAAA+CGG + tig0033659:30726-30745 None:intergenic 45.0%
TGATCTGACGTAGTGACTTG+AGG + tig0033659:30745-30764 None:intergenic 45.0%
GCAAAAACCTGGTTCCATTC+CGG + tig0033659:30807-30826 None:intergenic 45.0%
TGTAACCAAGGGCAAAAACC+TGG + tig0033659:30818-30837 None:intergenic 45.0%
!!! CATCGGTTTTGCTGTAACCA+AGG + tig0033659:30830-30849 None:intergenic 45.0%
TACAGCAAAACCGATGCAAC+CGG - tig0033659:30834-30853 Msa1452070:CDS 45.0%
CTACGTTGGAGATTTCCGTT+TGG - tig0033659:30859-30878 Msa1452070:CDS 45.0%
CTCTGTAGGTGAATCCCAAA+CGG + tig0033659:30877-30896 None:intergenic 45.0%
ATAGTCCTCTTGCTCCACAA+TGG - tig0033659:30955-30974 Msa1452070:CDS 45.0%
TCCGAATCTACCACCGTTAA+CGG - tig0033659:31196-31215 Msa1452070:CDS 45.0%
TGAGCCACTAGAAGATTCCA+TGG - tig0033659:31337-31356 Msa1452070:CDS 45.0%
AGGACCATGGAATCTTCTAG+TGG + tig0033659:31344-31363 None:intergenic 45.0%
ATCTTCTACGAGAAGGACCA+TGG + tig0033659:31357-31376 None:intergenic 45.0%
ACCTTCTAACGGGAACCATT+TGG + tig0033659:31468-31487 None:intergenic 45.0%
AAATGGTTCCCGTTAGAAGG+TGG - tig0033659:31467-31486 Msa1452070:CDS 45.0%
AATGGTTCCCGTTAGAAGGT+GGG - tig0033659:31468-31487 Msa1452070:CDS 45.0%
TTCCATAGAGATTTCGCGGT+GGG + tig0033659:31584-31603 None:intergenic 45.0%
TTTCCATAGAGATTTCGCGG+TGG + tig0033659:31585-31604 None:intergenic 45.0%
TCTCTATGGAAACCTCCAGT+TGG - tig0033659:31593-31612 Msa1452070:CDS 45.0%
AAATCCAAGGGTCCAGGAAA+AGG - tig0033659:31662-31681 Msa1452070:CDS 45.0%
AATCCAAGGGTCCAGGAAAA+GGG - tig0033659:31663-31682 Msa1452070:CDS 45.0%
!! GTCCACTGATTCTTACTGTG+TGG - tig0033659:31685-31704 Msa1452070:CDS 45.0%
TCTTACTGTGTGGCCAAGTA+TGG - tig0033659:31695-31714 Msa1452070:CDS 45.0%
CCGTAGGTGTATTTGACAAC+TGG - tig0033659:31816-31835 Msa1452070:CDS 45.0%
GTGAAATCGAGTTAGCGGTT+CGG - tig0033659:31984-32003 Msa1452070:CDS 45.0%
ATGTGTCAGGAAAAAACCCG+GGG + tig0033659:32018-32037 None:intergenic 45.0%
CATGTGTCAGGAAAAAACCC+GGG + tig0033659:32019-32038 None:intergenic 45.0%
TGATAAACCGCACATGTGTC+AGG + tig0033659:32031-32050 None:intergenic 45.0%
ATGCACTACATTCGTCCACT+TGG - tig0033659:32070-32089 Msa1452070:CDS 45.0%
CGAGGTTGTTCGATACATGT+TGG - tig0033659:32177-32196 Msa1452070:CDS 45.0%
ACTCACATGCTTGGAGTATG+AGG - tig0033659:32206-32225 Msa1452070:CDS 45.0%
GAATTGTGGCAGTGTTAGCT+TGG - tig0033659:32251-32270 Msa1452070:CDS 45.0%
TTTAGACCCAAGATACCAGC+TGG - tig0033659:32436-32455 Msa1452070:CDS 45.0%
TCCATACCAGCTGGTATCTT+GGG + tig0033659:32445-32464 None:intergenic 45.0%
ATCCATACCAGCTGGTATCT+TGG + tig0033659:32446-32465 None:intergenic 45.0%
! AAATCAGGTGGTTTGGAGCT+AGG + tig0033659:32532-32551 None:intergenic 45.0%
TAGCTCCAAACCACCTGATT+TGG - tig0033659:32531-32550 Msa1452070:CDS 45.0%
!! CCAAACCACCTGATTTGGTT+CGG - tig0033659:32536-32555 Msa1452070:CDS 45.0%
!! CAAACCACCTGATTTGGTTC+GGG - tig0033659:32537-32556 Msa1452070:CDS 45.0%
TAACGAACCCGAACCAAATC+AGG + tig0033659:32547-32566 None:intergenic 45.0%
! GGTTAAGAATGTTGGCTGCA+AGG - tig0033659:32572-32591 Msa1452070:CDS 45.0%
!! TGCAAGGGTGCAAACTGTTT+TGG - tig0033659:32588-32607 Msa1452070:CDS 45.0%
!! GCAAGGGTGCAAACTGTTTT+GGG - tig0033659:32589-32608 Msa1452070:CDS 45.0%
!! GGGTTCAAGCATTGGTTAGT+TGG - tig0033659:32635-32654 Msa1452070:CDS 45.0%
! GGCATTGGGTTCCTAAACAT+TGG + tig0033659:32778-32797 None:intergenic 45.0%
AATCTTCTCACCGTTTGGGG+CGG + tig0033659:29793-29812 None:intergenic 50.0%
GCCAATCTTCTCACCGTTTG+GGG + tig0033659:29796-29815 None:intergenic 50.0%
CGCCAATCTTCTCACCGTTT+GGG + tig0033659:29797-29816 None:intergenic 50.0%
CCAAACGGTGAGAAGATTGG+CGG - tig0033659:29795-29814 Msa1452070:CDS 50.0%
CGCAACCTTCTTCCCAAAGA+TGG - tig0033659:29835-29854 Msa1452070:CDS 50.0%
AGAGAAAACGAACCACCACC+CGG - tig0033659:29902-29921 Msa1452070:CDS 50.0%
GTTGAGTTCTTTGAACCGGG+TGG + tig0033659:29920-29939 None:intergenic 50.0%
! CGGGTTGAGTTCTTTGAACC+GGG + tig0033659:29923-29942 None:intergenic 50.0%
! CCGGGTTGAGTTCTTTGAAC+CGG + tig0033659:29924-29943 None:intergenic 50.0%
CCGGTTCAAAGAACTCAACC+CGG - tig0033659:29921-29940 Msa1452070:CDS 50.0%
CAAGCAACTCGTTCCAAACC+GGG + tig0033659:29942-29961 None:intergenic 50.0%
CGTTTCTGACCCGGAGAATA+TGG - tig0033659:29969-29988 Msa1452070:CDS 50.0%
AGTCACAGGCATCCGATGAT+GGG - tig0033659:30300-30319 Msa1452070:CDS 50.0%
!! CATCCGATGATGGGTGAAGA+GGG - tig0033659:30309-30328 Msa1452070:CDS 50.0%
CTTCCCTCTTCACCCATCAT+CGG + tig0033659:30315-30334 None:intergenic 50.0%
!! CATTGTGTGCCACTTCCTGA+CGG - tig0033659:30360-30379 Msa1452070:CDS 50.0%
TCTTCCAAAACCACCACTCG+CGG + tig0033659:30396-30415 None:intergenic 50.0%
TGAACACGAACTACCGGAGA+AGG + tig0033659:30423-30442 None:intergenic 50.0%
TCAACAAGATCCACCGTTGC+GGG - tig0033659:30440-30459 Msa1452070:CDS 50.0%
! ACAAACGGGCTTTCAGTTGG+AGG + tig0033659:30711-30730 None:intergenic 50.0%
GATCAAAGCCCGCGAGTTAT+AGG - tig0033659:30760-30779 Msa1452070:CDS 50.0%
TTCGTTGGGCCTATAACTCG+CGG + tig0033659:30772-30791 None:intergenic 50.0%
TTCCATTCCGGCGAGTCATT+GGG + tig0033659:30795-30814 None:intergenic 50.0%
! TGGAACCAGGTTTTTGCCCT+TGG - tig0033659:30810-30829 Msa1452070:CDS 50.0%
GGAAATCTCCAACGTAGCAC+CGG + tig0033659:30856-30875 None:intergenic 50.0%
CCTACAGAGCAATTTCTCGG+CGG - tig0033659:30888-30907 Msa1452070:CDS 50.0%
TGTGGAGCAAGAGGACTATC+TGG + tig0033659:30954-30973 None:intergenic 50.0%
AATATCGCCGGAGACTCTAC+CGG + tig0033659:31015-31034 None:intergenic 50.0%
!! TGCTTCTGGAAAAGCGTCGT+CGG + tig0033659:31066-31085 None:intergenic 50.0%
! ACGACGCTTTTCCAGAAGCA+TGG - tig0033659:31066-31085 Msa1452070:CDS 50.0%
GCATCTGAACTCCATGCTTC+TGG + tig0033659:31080-31099 None:intergenic 50.0%
GAGTTCAGATGCACCATACG+TGG - tig0033659:31088-31107 Msa1452070:CDS 50.0%
GCCGTTAACGGTGGTAGATT+CGG + tig0033659:31200-31219 None:intergenic 50.0%
AGTGAAACGACATGCTGTGG+TGG + tig0033659:31289-31308 None:intergenic 50.0%
! ACCACAGCATGTCGTTTCAC+TGG - tig0033659:31288-31307 Msa1452070:CDS 50.0%
GAAGATCTTCTCTTCGTCGC+CGG - tig0033659:31314-31333 Msa1452070:CDS 50.0%
GGAATCTTCTAGTGGCTCAC+CGG + tig0033659:31336-31355 None:intergenic 50.0%
TGGTGCGATCTTCTACGAGA+AGG + tig0033659:31364-31383 None:intergenic 50.0%
TCTAACGGGAACCATTTGGC+TGG + tig0033659:31464-31483 None:intergenic 50.0%
GCCAAATGGTTCCCGTTAGA+AGG - tig0033659:31464-31483 Msa1452070:CDS 50.0%
AGTAGGACCCACCTTCTAAC+GGG + tig0033659:31478-31497 None:intergenic 50.0%
CAGTAGGACCCACCTTCTAA+CGG + tig0033659:31479-31498 None:intergenic 50.0%
TTAGAAGGTGGGTCCTACTG+TGG - tig0033659:31479-31498 Msa1452070:CDS 50.0%
TAGAAGGTGGGTCCTACTGT+GGG - tig0033659:31480-31499 Msa1452070:CDS 50.0%
! CTTCTAAACAGAGGCGTAGG+TGG + tig0033659:31511-31530 None:intergenic 50.0%
CACCTACGCCTCTGTTTAGA+AGG - tig0033659:31509-31528 Msa1452070:CDS 50.0%
! CACCTTCTAAACAGAGGCGT+AGG + tig0033659:31514-31533 None:intergenic 50.0%
CTACGCCTCTGTTTAGAAGG+TGG - tig0033659:31512-31531 Msa1452070:CDS 50.0%
CCTGGACCCTTGGATTTCAT+CGG + tig0033659:31659-31678 None:intergenic 50.0%
! GAATCAGTGGACCCTTTTCC+TGG + tig0033659:31677-31696 None:intergenic 50.0%
GGCCACACAGTAAGAATCAG+TGG + tig0033659:31690-31709 None:intergenic 50.0%
GAAGCTATCCGTTACGGTTC+GGG + tig0033659:31738-31757 None:intergenic 50.0%
CGAAGCTATCCGTTACGGTT+CGG + tig0033659:31739-31758 None:intergenic 50.0%
TGGGTCGAAGCTATCCGTTA+CGG + tig0033659:31744-31763 None:intergenic 50.0%
! TAACGGATAGCTTCGACCCA+CGG - tig0033659:31744-31763 Msa1452070:CDS 50.0%
TGTACTGTTCGTTCCACCGT+GGG + tig0033659:31763-31782 None:intergenic 50.0%
GGTGGAACGAACAGTACACA+TGG - tig0033659:31765-31784 Msa1452070:CDS 50.0%
GAACGAACAGTACACATGGC+AGG - tig0033659:31769-31788 Msa1452070:CDS 50.0%
CCTACGGTTAAGACAGTGCA+AGG + tig0033659:31803-31822 None:intergenic 50.0%
CCTTGCACTGTCTTAACCGT+AGG - tig0033659:31800-31819 Msa1452070:CDS 50.0%
! CTGGCGTATGTTTGCTGATG+TGG - tig0033659:31835-31854 Msa1452070:CDS 50.0%
! CTACATTCGTCCACTTGGTG+TGG - tig0033659:32075-32094 Msa1452070:CDS 50.0%
CCACTGAGCTACCATCTTAG+TGG + tig0033659:32128-32147 None:intergenic 50.0%
CCACTAAGATGGTAGCTCAG+TGG - tig0033659:32125-32144 Msa1452070:CDS 50.0%
TAAGATGGTAGCTCAGTGGC+TGG - tig0033659:32129-32148 Msa1452070:CDS 50.0%
!! TGGATGCTGACTCACATGCT+TGG - tig0033659:32197-32216 Msa1452070:CDS 50.0%
!! GGGCTGTTGGATTAGCTAAG+TGG - tig0033659:32272-32291 Msa1452070:CDS 50.0%
ACCCAAGATACCAGCTGGTA+TGG - tig0033659:32441-32460 Msa1452070:CDS 50.0%
CCGAACCAAATCAGGTGGTT+TGG + tig0033659:32539-32558 None:intergenic 50.0%
! TGGTTCGGGTTCGTTATGAC+AGG - tig0033659:32551-32570 Msa1452070:CDS 50.0%
AGGTGAGAGGGTTCAAGCAT+TGG - tig0033659:32627-32646 Msa1452070:CDS 50.0%
GCCTCCTAAAATGGTTGCTG+TGG - tig0033659:32726-32745 Msa1452070:CDS 50.0%
! GCCACAGCAACCATTTTAGG+AGG + tig0033659:32730-32749 None:intergenic 50.0%
GTTTAGGAACCCAATGCCTC+CGG - tig0033659:32780-32799 Msa1452070:CDS 50.0%
!! TCAAACTAGCCGGAGGCATT+GGG + tig0033659:32792-32811 None:intergenic 50.0%
! TTCAAACTAGCCGGAGGCAT+TGG + tig0033659:32793-32812 None:intergenic 50.0%
GCAACGACGCCGTTTCAACA+AGG - tig0033659:29766-29785 Msa1452070:CDS 55.0%
TGGGGCGGTCCTTGTTGAAA+CGG + tig0033659:29778-29797 None:intergenic 55.0%
TCAACAAGGACCGCCCCAAA+CGG - tig0033659:29780-29799 Msa1452070:CDS 55.0%
GCCCCAAACGGTGAGAAGAT+TGG - tig0033659:29792-29811 Msa1452070:CDS 55.0%
CCGCCAATCTTCTCACCGTT+TGG + tig0033659:29798-29817 None:intergenic 55.0%
AACGGTGAGAAGATTGGCGG+TGG - tig0033659:29798-29817 Msa1452070:CDS 55.0%
AGGAAGTTCCAGCCCTTACG+TGG - tig0033659:29861-29880 Msa1452070:CDS 55.0%
AAGTTCCAGCCCTTACGTGG+TGG - tig0033659:29864-29883 Msa1452070:CDS 55.0%
GAGTTCTTTGAACCGGGTGG+TGG + tig0033659:29917-29936 None:intergenic 55.0%
CAGTCACAGGCATCCGATGA+TGG - tig0033659:30299-30318 Msa1452070:CDS 55.0%
!! GCATCCGATGATGGGTGAAG+AGG - tig0033659:30308-30327 Msa1452070:CDS 55.0%
AAAACCACCACTCGCGGTGA+AGG + tig0033659:30390-30409 None:intergenic 55.0%
! TTCACCGCGAGTGGTGGTTT+TGG - tig0033659:30389-30408 Msa1452070:CDS 55.0%
TGAGCGTACATCTCCCGCAA+CGG + tig0033659:30456-30475 None:intergenic 55.0%
GATGTACGCTCAACCGGAAC+CGG - tig0033659:30464-30483 Msa1452070:CDS 55.0%
TCGTTGGGCCTATAACTCGC+GGG + tig0033659:30771-30790 None:intergenic 55.0%
GGCGAGTCATTGGGTTCGTT+GGG + tig0033659:30786-30805 None:intergenic 55.0%
CAACGAACCCAATGACTCGC+CGG - tig0033659:30785-30804 Msa1452070:CDS 55.0%
AACCCAATGACTCGCCGGAA+TGG - tig0033659:30790-30809 Msa1452070:CDS 55.0%
GTTCCATTCCGGCGAGTCAT+TGG + tig0033659:30796-30815 None:intergenic 55.0%
!! CAACGTAGCACCGGTTGCAT+CGG + tig0033659:30847-30866 None:intergenic 55.0%
CCGCCGAGAAATTGCTCTGT+AGG + tig0033659:30891-30910 None:intergenic 55.0%
CGGTACCATTGTGGAGCAAG+AGG + tig0033659:30963-30982 None:intergenic 55.0%
CCTTCGAGACGGTACCATTG+TGG + tig0033659:30972-30991 None:intergenic 55.0%
CCACAATGGTACCGTCTCGA+AGG - tig0033659:30969-30988 Msa1452070:CDS 55.0%
CAATGGTACCGTCTCGAAGG+TGG - tig0033659:30972-30991 Msa1452070:CDS 55.0%
CAAAACGCCGGTAGAGTCTC+CGG - tig0033659:31005-31024 Msa1452070:CDS 55.0%
CTAATCTCCGGCGCCGTTAA+CGG + tig0033659:31212-31231 None:intergenic 55.0%
GCCAGTGAAACGACATGCTG+TGG + tig0033659:31292-31311 None:intergenic 55.0%
CGTAGAAGATCGCACCACCA+AGG - tig0033659:31367-31386 Msa1452070:CDS 55.0%
AGATCGCACCACCAAGGAAG+CGG - tig0033659:31373-31392 Msa1452070:CDS 55.0%
ACGTCAGAGGAATGACGACG+TGG + tig0033659:31409-31428 None:intergenic 55.0%
CGCTGTTCGATTGACGTCAG+AGG + tig0033659:31422-31441 None:intergenic 55.0%
! TAGGTGGACTCTCCCACAGT+AGG + tig0033659:31495-31514 None:intergenic 55.0%
GTCCCACCGCGAAATCTCTA+TGG - tig0033659:31579-31598 Msa1452070:CDS 55.0%
CTTGGAATCTTAGGCGCTCG+TGG - tig0033659:31626-31645 Msa1452070:CDS 55.0%
CCGATGAAATCCAAGGGTCC+AGG - tig0033659:31656-31675 Msa1452070:CDS 55.0%
GGTCAGAACCCGAACCGTAA+CGG - tig0033659:31727-31746 Msa1452070:CDS 55.0%
GTGTACTGTTCGTTCCACCG+TGG + tig0033659:31764-31783 None:intergenic 55.0%
! GCAGTGTTAGCTTGGGCTGT+TGG - tig0033659:32259-32278 Msa1452070:CDS 55.0%
CGAACCCGAACCAAATCAGG+TGG + tig0033659:32544-32563 None:intergenic 55.0%
TTCCAGCCCTTACGTGGTGG+CGG - tig0033659:29867-29886 Msa1452070:CDS 60.0%
CGAAGTCCGCCACCACGTAA+GGG + tig0033659:29876-29895 None:intergenic 60.0%
TCGAAGTCCGCCACCACGTA+AGG + tig0033659:29877-29896 None:intergenic 60.0%
!! TACGTGGTGGCGGACTTCGA+CGG - tig0033659:29877-29896 Msa1452070:CDS 60.0%
ACGGTGACGCAGAGCAAGAG+AGG - tig0033659:30268-30287 Msa1452070:CDS 60.0%
GAAGGAGGACCGTCAGGAAG+TGG + tig0033659:30372-30391 None:intergenic 60.0%
GCGGGAGATGTACGCTCAAC+CGG - tig0033659:30458-30477 Msa1452070:CDS 60.0%
CGGCGAGTCATTGGGTTCGT+TGG + tig0033659:30787-30806 None:intergenic 60.0%
TGACTCGCCGGAATGGAACC+AGG - tig0033659:30797-30816 Msa1452070:CDS 60.0%
!! CGATGCAACCGGTGCTACGT+TGG - tig0033659:30845-30864 Msa1452070:CDS 60.0%
GGCGCAGCAGAACAAAACGC+CGG - tig0033659:30993-31012 Msa1452070:CDS 60.0%
GAGCGAGTGTGTGCCACGTA+TGG + tig0033659:31104-31123 None:intergenic 60.0%
TCTACCACCGTTAACGGCGC+CGG - tig0033659:31202-31221 Msa1452070:CDS 60.0%
! GGCGCCGGAGATTAGAGTGA+AGG - tig0033659:31217-31236 Msa1452070:CDS 60.0%
GAGTAACGCCGCTTCCTTGG+TGG + tig0033659:31384-31403 None:intergenic 60.0%
GCTGAGTAACGCCGCTTCCT+TGG + tig0033659:31387-31406 None:intergenic 60.0%
ACCATTTGGCTGGCACGTGG+CGG + tig0033659:31454-31473 None:intergenic 60.0%
GGAACCATTTGGCTGGCACG+TGG + tig0033659:31457-31476 None:intergenic 60.0%
! GGACCCTTTTCCTGGACCCT+TGG + tig0033659:31669-31688 None:intergenic 60.0%
!! TCCACTTGGTGTGGCCCAAC+AGG - tig0033659:32084-32103 Msa1452070:CDS 60.0%
TCCTGTTGGGCCACACCAAG+TGG + tig0033659:32088-32107 None:intergenic 60.0%
!! ACTTGGTGTGGCCCAACAGG+AGG - tig0033659:32087-32106 Msa1452070:CDS 60.0%
GCCCAACAGGAGGCTTTACG+CGG - tig0033659:32097-32116 Msa1452070:CDS 60.0%
CCCGCGTAAAGCCTCCTGTT+GGG + tig0033659:32101-32120 None:intergenic 60.0%
CCCAACAGGAGGCTTTACGC+GGG - tig0033659:32098-32117 Msa1452070:CDS 60.0%
CCAACAGGAGGCTTTACGCG+GGG - tig0033659:32099-32118 Msa1452070:CDS 60.0%
CGAACAACCTCGTGCCCCAT+CGG + tig0033659:32169-32188 None:intergenic 60.0%
GCAAGAACAACCACCGCCGC+CGG - tig0033659:30233-30252 Msa1452070:CDS 65.0%
! TCACCGTGCCGCTCTTCCTC+CGG + tig0033659:30255-30274 None:intergenic 65.0%
TCCTCCTTCACCGCGAGTGG+TGG - tig0033659:30383-30402 Msa1452070:CDS 65.0%
ACCACCACTCGCGGTGAAGG+AGG + tig0033659:30387-30406 None:intergenic 65.0%
GCGTACATCTCCCGCAACGG+TGG + tig0033659:30453-30472 None:intergenic 65.0%
CTGCTGCGCCACCTTCGAGA+CGG + tig0033659:30983-31002 None:intergenic 65.0%
CGTGGCACACACTCGCTCCA+AGG - tig0033659:31106-31125 Msa1452070:CDS 65.0%
ATCTCCGGCGCCGTTAACGG+TGG + tig0033659:31209-31228 None:intergenic 65.0%
ACCGCCACGTGCCAGCCAAA+TGG - tig0033659:31450-31469 Msa1452070:CDS 65.0%
CGGATAGCTTCGACCCACGG+TGG - tig0033659:31747-31766 Msa1452070:CDS 65.0%
CCCCGCGTAAAGCCTCCTGT+TGG + tig0033659:32102-32121 None:intergenic 65.0%
ACGCGGGGCAGCCACTAAGA+TGG - tig0033659:32114-32133 Msa1452070:CDS 65.0%
GCTCGCTCAGAGCCTCCGAT+GGG - tig0033659:32151-32170 Msa1452070:CDS 65.0%
CTCGCTCAGAGCCTCCGATG+GGG - tig0033659:32152-32171 Msa1452070:CDS 65.0%
ACAACCTCGTGCCCCATCGG+AGG + tig0033659:32166-32185 None:intergenic 65.0%
GTCCGCCACCACGTAAGGGC+TGG + tig0033659:29872-29891 None:intergenic 70.0%
AGAACAACCACCGCCGCCGG+AGG - tig0033659:30236-30255 Msa1452070:CDS 70.0%
CGCGGTGAAGGAGGACCGTC+AGG + tig0033659:30378-30397 None:intergenic 70.0%
CGGTCCTCCTTCACCGCGAG+TGG - tig0033659:30380-30399 Msa1452070:CDS 70.0%
!! GCGGTTCGGTTCGCTTGCCC+CGG - tig0033659:31998-32017 Msa1452070:CDS 70.0%
!! CGGTTCGGTTCGCTTGCCCC+GGG - tig0033659:31999-32018 Msa1452070:CDS 70.0%
GGCTCGCTCAGAGCCTCCGA+TGG - tig0033659:32150-32169 Msa1452070:CDS 70.0%
AGAGCCTCCGATGGGGCACG+AGG - tig0033659:32159-32178 Msa1452070:CDS 70.0%
CACCGCCGCCGGAGGAAGAG+CGG - tig0033659:30244-30263 Msa1452070:CDS 75.0%
TGCCGCTCTTCCTCCGGCGG+CGG + tig0033659:30249-30268 None:intergenic 75.0%
! CCGTGCCGCTCTTCCTCCGG+CGG + tig0033659:30252-30271 None:intergenic 75.0%
CCGCCGGAGGAAGAGCGGCA+CGG - tig0033659:30249-30268 Msa1452070:CDS 75.0%
! CGCTCTTCCTCCGGCGGCGG+TGG + tig0033659:30246-30265 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
tig0033659 gene 29757 32855 29757 ID=Msa1452070;Name=Msa1452070
tig0033659 mRNA 29757 32855 29757 ID=Msa1452070-mRNA-1;Parent=Msa1452070;Name=Msa1452070-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|1032
tig0033659 exon 29757 32855 29757 ID=Msa1452070-mRNA-1:exon:18374;Parent=Msa1452070-mRNA-1
tig0033659 CDS 29757 32855 29757 ID=Msa1452070-mRNA-1:cds;Parent=Msa1452070-mRNA-1
Gene Sequence

>Msa1452070

ATGAACATGGCAACGACGCCGTTTCAACAAGGACCGCCCCAAACGGTGAGAAGATTGGCGGTGGAAGTTGTTGACGCACGCAACCTTCTTCCCAAAGATGGTCAAGGAAGTTCCAGCCCTTACGTGGTGGCGGACTTCGACGGTCAGAGAAAACGAACCACCACCCGGTTCAAAGAACTCAACCCGGTTTGGAACGAGTTGCTTGAGTTCATCGTTTCTGACCCGGAGAATATGGAGTTTGAAGAGCTTGAAGTTGAGGTTTATAATGATAAGAAATTTGGGAATGGTAGTGGTCGCAAGAATCATTTTCTTGGTAGGGTTAAGCTTTATGGAACACAGTTTTCTTGTAGAGGTGAAGAAGCTTTGGTTTATTATACTTTAGAGAAGAAAAGTGTTTTCAGTTGGATTAGAGGTGAAATCGGTTTGAAGATTTATTACTACGATGAGTTGTTACAGCAAGATGAACAGCAGCAGCAGCAAGAACAACCACCGCCGCCGGAGGAAGAGCGGCACGGTGACGCAGAGCAAGAGAGGAACAATCACAGTCACAGGCATCCGATGATGGGTGAAGAGGGAAGAGTTTATCAGGTTGAACAGATGGAGCATTGTGTGCCACTTCCTGACGGTCCTCCTTCACCGCGAGTGGTGGTTTTGGAAGAATCACCTTCTCCGGTAGTTCGTGTTCAACAAGATCCACCGTTGCGGGAGATGTACGCTCAACCGGAACCGGAAATGCAGTATCATCATCCTGAGGTTAGGAAAATGCAAACAATGAGGAATGATAGAGTGAAGATTATGAAAAGACCTAATGGTAACGGTAATGGTGATTATGCTCCGAAAGATATCTCCGGGAAGAAACCTAACGGTGAAACTGAGAGGATTCATCCCTATGATCTAGTTGAGCCAATGCAGTATCTGTTTGTTAGAATCGTGAAAGTTCGCGGGCTTAATCCTCCAACTGAAAGCCCGTTTGTGAAGGTTCGAACCTCAAGTCACTACGTCAGATCAAAGCCCGCGAGTTATAGGCCCAACGAACCCAATGACTCGCCGGAATGGAACCAGGTTTTTGCCCTTGGTTACAGCAAAACCGATGCAACCGGTGCTACGTTGGAGATTTCCGTTTGGGATTCACCTACAGAGCAATTTCTCGGCGGTGTTTGCTTTGATCTTTCTGATGTACCTATTCGTGATTCTCCAGATAGTCCTCTTGCTCCACAATGGTACCGTCTCGAAGGTGGCGCAGCAGAACAAAACGCCGGTAGAGTCTCCGGCGATATTCAGCTTTCTGTTTGGATCGGAACTCAATCCGACGACGCTTTTCCAGAAGCATGGAGTTCAGATGCACCATACGTGGCACACACTCGCTCCAAGGTTTATCAATCACCGAAGCTTTGGTATCTGAGAGTAACAGTCATGGAAGCACAAGACCTGAATCTAACTCCGAATCTACCACCGTTAACGGCGCCGGAGATTAGAGTGAAGGTACAATTAGGGTTTCAATCACAGAGAACAAGAAGAGGCTCAATGAACCACCACAGCATGTCGTTTCACTGGCACGAAGATCTTCTCTTCGTCGCCGGTGAGCCACTAGAAGATTCCATGGTCCTTCTCGTAGAAGATCGCACCACCAAGGAAGCGGCGTTACTCAGCCACGTCGTCATTCCTCTGACGTCAATCGAACAGCGAATAGACGACCGCCACGTGCCAGCCAAATGGTTCCCGTTAGAAGGTGGGTCCTACTGTGGGAGAGTCCACCTACGCCTCTGTTTAGAAGGTGGTTATCACGTGCTTGATGAAGCGGCGCACGTGTGTAGTGATTTTCGTCCCACCGCGAAATCTCTATGGAAACCTCCAGTTGGAATTCTTGAACTTGGAATCTTAGGCGCTCGTGGTCTTCTTCCGATGAAATCCAAGGGTCCAGGAAAAGGGTCCACTGATTCTTACTGTGTGGCCAAGTATGGCAAAAAATGGGTCAGAACCCGAACCGTAACGGATAGCTTCGACCCACGGTGGAACGAACAGTACACATGGCAGGTATATGATCCTTGCACTGTCTTAACCGTAGGTGTATTTGACAACTGGCGTATGTTTGCTGATGTGGCAGAAGAAAAACCAGATTGCCGTATAGGTAAAATTCGTATACGAGTTTCTACACTAGAGAGCAATAAAATCTACACAAGTTCATATCCATTACTGGTTCTGACTCGAAACGGCTTGAAGAAAATGGGTGAAATCGAGTTAGCGGTTCGGTTCGCTTGCCCCGGGTTTTTTCCTGACACATGTGCGGTTTATCAACAACCATTACTTCCAAAAATGCACTACATTCGTCCACTTGGTGTGGCCCAACAGGAGGCTTTACGCGGGGCAGCCACTAAGATGGTAGCTCAGTGGCTGGCTCGCTCAGAGCCTCCGATGGGGCACGAGGTTGTTCGATACATGTTGGATGCTGACTCACATGCTTGGAGTATGAGGAAAAGTAAAGCCAATTGGTTTAGAATTGTGGCAGTGTTAGCTTGGGCTGTTGGATTAGCTAAGTGGTTAGATGATATAAGAAGATGGAAAAATCCAGTTACAACGGTTTTGCTTCATATACTTTACTTGGTCCTTGTTTGGTATCCAGATTTAATTGTTCCAACCGGGTTTTTATATGTTGTTTTGATTGGAATATGGTATTTCCGTTTTAGACCCAAGATACCAGCTGGTATGGATACAAGATTATCACAAGCTGAAGCTGTTGATCCAGATGAATTAGATGAAGAATTTGACACAATGCCTAGCTCCAAACCACCTGATTTGGTTCGGGTTCGTTATGACAGGTTAAGAATGTTGGCTGCAAGGGTGCAAACTGTTTTGGGTGATTTTGCAACACAAGGTGAGAGGGTTCAAGCATTGGTTAGTTGGAGAGACCCAAGAGCTACAAAATTGTTCATTGGAGTGTGTCTTGTTATTGCTATTATACTCTATTCAGTGCCTCCTAAAATGGTTGCTGTGGCTTTAGGATTCTACTATCTTCGTCATCCAATGTTTAGGAACCCAATGCCTCCGGCTAGTTTGAACTTTTTCAGAAGACTTCCTAGTTTGTCTGATAGGTTGATGTAG
Protein sequence

>Msa1452070

MNMATTPFQQGPPQTVRRLAVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNELLEFIVSDPENMEFEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSCRGEEALVYYTLEKKSVFSWIRGEIGLKIYYYDELLQQDEQQQQQEQPPPPEEERHGDAEQERNNHSHRHPMMGEEGRVYQVEQMEHCVPLPDGPPSPRVVVLEESPSPVVRVQQDPPLREMYAQPEPEMQYHHPEVRKMQTMRNDRVKIMKRPNGNGNGDYAPKDISGKKPNGETERIHPYDLVEPMQYLFVRIVKVRGLNPPTESPFVKVRTSSHYVRSKPASYRPNEPNDSPEWNQVFALGYSKTDATGATLEISVWDSPTEQFLGGVCFDLSDVPIRDSPDSPLAPQWYRLEGGAAEQNAGRVSGDIQLSVWIGTQSDDAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVTVMEAQDLNLTPNLPPLTAPEIRVKVQLGFQSQRTRRGSMNHHSMSFHWHEDLLFVAGEPLEDSMVLLVEDRTTKEAALLSHVVIPLTSIEQRIDDRHVPAKWFPLEGGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKSLWKPPVGILELGILGARGLLPMKSKGPGKGSTDSYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVAEEKPDCRIGKIRIRVSTLESNKIYTSSYPLLVLTRNGLKKMGEIELAVRFACPGFFPDTCAVYQQPLLPKMHYIRPLGVAQQEALRGAATKMVAQWLARSEPPMGHEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYFRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDLVRVRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLVIAIILYSVPPKMVAVALGFYYLRHPMFRNPMPPASLNFFRRLPSLSDRLM*