Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000484.t1 | RHN46508.1 | 97.7 | 603 | 14 | 0 | 1 | 603 | 1 | 603 | 0.00E+00 | 1201 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000484.t1 | Q9FFT4 | 84.2 | 609 | 88 | 3 | 1 | 603 | 1 | 607 | 6.1e-308 | 1057.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000484.t1 | A0A396H177 | 97.7 | 603 | 14 | 0 | 1 | 603 | 1 | 603 | 0.0e+00 | 1201.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000484 | MS.gene013671 | PPI |
| MS.gene02655 | MS.gene000484 | PPI |
| MS.gene000484 | MS.gene02488 | PPI |
| MS.gene000484 | MS.gene017382 | PPI |
| MS.gene000484 | MS.gene02654 | PPI |
| MS.gene81954 | MS.gene000484 | PPI |
| MS.gene064505 | MS.gene000484 | PPI |
| MS.gene33522 | MS.gene000484 | PPI |
| MS.gene000484 | MS.gene02651 | PPI |
| MS.gene013678 | MS.gene000484 | PPI |
| MS.gene000484 | MS.gene81956 | PPI |
| MS.gene81957 | MS.gene000484 | PPI |
| MS.gene26127 | MS.gene000484 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000484.t1 | MTR_7g069540 | 92.066 | 605 | 46 | 2 | 1 | 603 | 1 | 605 | 0.0 | 1139 |
| MS.gene000484.t1 | MTR_7g069500 | 91.874 | 603 | 21 | 2 | 1 | 603 | 1 | 575 | 0.0 | 1112 |
| MS.gene000484.t1 | MTR_4g017200 | 85.832 | 607 | 82 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1071 |
| MS.gene000484.t1 | MTR_5g046610 | 85.502 | 607 | 84 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1068 |
| MS.gene000484.t1 | MTR_2g015560 | 82.155 | 566 | 101 | 0 | 38 | 603 | 17 | 582 | 0.0 | 987 |
| MS.gene000484.t1 | MTR_2g009330 | 68.866 | 591 | 178 | 1 | 10 | 600 | 25 | 609 | 0.0 | 878 |
| MS.gene000484.t1 | MTR_5g046620 | 50.622 | 241 | 42 | 5 | 233 | 472 | 1 | 165 | 9.98e-65 | 209 |
| MS.gene000484.t1 | MTR_3g099190 | 23.723 | 548 | 359 | 20 | 19 | 531 | 47 | 570 | 1.22e-17 | 87.0 |
| MS.gene000484.t1 | MTR_1g011530 | 46.667 | 75 | 37 | 1 | 349 | 423 | 31 | 102 | 2.98e-16 | 75.1 |
| MS.gene000484.t1 | MTR_2g013120 | 22.426 | 544 | 357 | 17 | 27 | 531 | 57 | 574 | 1.27e-15 | 80.9 |
| MS.gene000484.t1 | MTR_2g027220 | 22.842 | 556 | 353 | 18 | 47 | 558 | 67 | 590 | 2.29e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000484.t1 | AT5G54960 | 84.236 | 609 | 88 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1072 |
| MS.gene000484.t1 | AT4G33070 | 84.893 | 609 | 84 | 2 | 1 | 603 | 1 | 607 | 0.0 | 1071 |
| MS.gene000484.t1 | AT5G01320 | 83.444 | 604 | 98 | 2 | 1 | 603 | 1 | 603 | 0.0 | 1055 |
| MS.gene000484.t1 | AT5G01330 | 82.550 | 596 | 100 | 1 | 8 | 603 | 1 | 592 | 0.0 | 1028 |
| MS.gene000484.t1 | AT5G17380 | 24.351 | 501 | 309 | 18 | 47 | 509 | 18 | 486 | 1.06e-17 | 87.0 |
| MS.gene000484.t1 | AT3G48560 | 22.612 | 513 | 343 | 15 | 47 | 531 | 103 | 589 | 1.81e-13 | 73.9 |
Find 156 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGGTGATGGAAGCTTTC+AGG | 0.099113 | 7.3:-35675419 | MS.gene000484:intron |
| CCCATTTCATTGGAACTTAT+TGG | 0.122987 | 7.3:-35676059 | MS.gene000484:CDS |
| CCATTTCATTGGAACTTATT+GGG | 0.218907 | 7.3:-35676058 | MS.gene000484:CDS |
| GGACCGAATTCTAATGATTA+TGG | 0.227678 | 7.3:-35677796 | MS.gene000484:CDS |
| TACTTGGGAGCAAGTGAAAA+AGG | 0.251742 | 7.3:+35676649 | None:intergenic |
| TCTGAAGTTTACTGAGGATT+TGG | 0.266713 | 7.3:+35674868 | None:intergenic |
| CTGAAGTTTACTGAGGATTT+GGG | 0.267884 | 7.3:+35674869 | None:intergenic |
| TGTATCCTCCATTGTTTATC+AGG | 0.271932 | 7.3:+35675245 | None:intergenic |
| AAACATAAGCTGTCTTTCTT+TGG | 0.273008 | 7.3:+35674976 | None:intergenic |
| TTAACTCTCAAAGGTTCTTT+TGG | 0.273563 | 7.3:+35675742 | None:intergenic |
| CCCAATAAGTTCCAATGAAA+TGG | 0.289567 | 7.3:+35676058 | None:intergenic |
| GCTTTCGCCACCCTCAGTTT+AGG | 0.339876 | 7.3:+35676171 | None:intergenic |
| CAAATGCAATATGGTTCAAT+TGG | 0.346194 | 7.3:-35675505 | MS.gene000484:CDS |
| AGGATTCTTCATCATACTAT+TGG | 0.352361 | 7.3:-35677766 | MS.gene000484:CDS |
| GATCGGGTTGTAGTTGCTAA+TGG | 0.353544 | 7.3:-35675895 | MS.gene000484:CDS |
| AACAAAATGTCCACAATGTT+AGG | 0.362479 | 7.3:-35678213 | None:intergenic |
| CAAGCAATCACTCGCTTCTC+GGG | 0.364950 | 7.3:+35675442 | None:intergenic |
| TATGAGTTTCAAATGCAATA+TGG | 0.365373 | 7.3:-35675514 | MS.gene000484:CDS |
| ATGAAATGGGGATGGTGCTC+AGG | 0.369145 | 7.3:+35676072 | None:intergenic |
| CATGAAACGACGTCGTTGTT+TGG | 0.370477 | 7.3:+35678168 | None:intergenic |
| CAGCCAATGCTTATATAAAC+AGG | 0.374707 | 7.3:+35676718 | None:intergenic |
| GCTGATGCATACTTGTTTGC+CGG | 0.375814 | 7.3:-35675994 | MS.gene000484:CDS |
| GTGTTGTTACGTTCACTGTT+GGG | 0.380795 | 7.3:-35677888 | MS.gene000484:CDS |
| GACGCTTCGCAAGTGCCTTT+AGG | 0.385948 | 7.3:+35675839 | None:intergenic |
| CAGTTCTTGATAACATTGTA+TGG | 0.391023 | 7.3:+35675196 | None:intergenic |
| CCAATAAGTTCCAATGAAAT+GGG | 0.391316 | 7.3:+35676059 | None:intergenic |
| TTGCCGCTTATTTGTATTGT+TGG | 0.393601 | 7.3:-35677820 | MS.gene000484:CDS |
| GAGCACCATCCCCATTTCAT+TGG | 0.394834 | 7.3:-35676069 | MS.gene000484:CDS |
| GCAAGCAATCACTCGCTTCT+CGG | 0.396937 | 7.3:+35675441 | None:intergenic |
| GTTGCTAATGGACCTGCATT+TGG | 0.401191 | 7.3:-35675883 | MS.gene000484:CDS |
| CTAATGATTATGGGACTAGT+AGG | 0.404499 | 7.3:-35677786 | MS.gene000484:CDS |
| GAAGCAATTGCAACAGCAAC+AGG | 0.414187 | 7.3:-35675000 | MS.gene000484:CDS |
| GTCCCATAATCATTAGAATT+CGG | 0.422032 | 7.3:+35677793 | None:intergenic |
| TTTAATGACTACAGCTCTGT+TGG | 0.425890 | 7.3:-35675964 | MS.gene000484:CDS |
| CAGGAGGCGATCGCGGTGGC+TGG | 0.435574 | 7.3:+35678114 | None:intergenic |
| GACCGAATTCTAATGATTAT+GGG | 0.436897 | 7.3:-35677795 | MS.gene000484:CDS |
| ACCGACGTCTTCTCCGTTCC+CGG | 0.443261 | 7.3:-35678039 | MS.gene000484:CDS |
| ATTGTTTATCAGGAAGATGA+TGG | 0.443596 | 7.3:+35675255 | None:intergenic |
| CATACAATGTTATCAAGAAC+TGG | 0.450936 | 7.3:-35675195 | MS.gene000484:CDS |
| CTCAACTCCTGACTAAAATC+AGG | 0.453988 | 7.3:+35677739 | None:intergenic |
| GAGTGTGAGGTTGAAGTCTC+CGG | 0.455911 | 7.3:+35678020 | None:intergenic |
| AGGCGATCGCGGTGGCTGGT+TGG | 0.460812 | 7.3:+35678118 | None:intergenic |
| ATCAAAATGCATCCAAATGC+AGG | 0.464273 | 7.3:+35675871 | None:intergenic |
| CATTGAAGTGATTGTTCACA+AGG | 0.466013 | 7.3:-35674953 | MS.gene000484:CDS |
| TGTGTTGTTACGTTCACTGT+TGG | 0.474626 | 7.3:-35677889 | MS.gene000484:CDS |
| CAATCATTGTGCAGCCCGAT+CGG | 0.474852 | 7.3:-35675912 | MS.gene000484:CDS |
| TGGTCTGTTGGTGCAACTCT+TGG | 0.476946 | 7.3:-35675481 | MS.gene000484:CDS |
| CCGTGATGCCATCAGCTAAA+GGG | 0.477384 | 7.3:-35676101 | MS.gene000484:CDS |
| CATTTCATTGGAACTTATTG+GGG | 0.478426 | 7.3:-35676057 | MS.gene000484:CDS |
| CTAGTCGGCGTGCGAGGTGG+CGG | 0.480523 | 7.3:+35678076 | None:intergenic |
| TTAGGACCACCTACTAGTAC+AGG | 0.482399 | 7.3:+35676189 | None:intergenic |
| TTTGATGAAGGATTTCCTAA+AGG | 0.483996 | 7.3:-35675854 | MS.gene000484:CDS |
| CCGCTTATTTGTATTGTTGG+TGG | 0.484728 | 7.3:-35677817 | MS.gene000484:CDS |
| TTGAAATTGCCTGAGGGATG+TGG | 0.486372 | 7.3:-35675631 | MS.gene000484:CDS |
| TGCAATATGGTTCAATTGGA+TGG | 0.486831 | 7.3:-35675501 | MS.gene000484:CDS |
| TTAATGACTACAGCTCTGTT+GGG | 0.491232 | 7.3:-35675963 | MS.gene000484:CDS |
| ACAACATCTGTTGTATATGT+TGG | 0.492054 | 7.3:+35675710 | None:intergenic |
| GACAGGATCACGACTGAAAG+TGG | 0.492188 | 7.3:+35676672 | None:intergenic |
| CGACCATCTCGTCAATGAAC+CGG | 0.492546 | 7.3:-35677995 | MS.gene000484:CDS |
| AATCATTGTGCAGCCCGATC+GGG | 0.492725 | 7.3:-35675911 | MS.gene000484:CDS |
| AGTGTTCTTAATGCTATAGC+TGG | 0.494975 | 7.3:-35677859 | MS.gene000484:CDS |
| GCCGTGATGCCATCAGCTAA+AGG | 0.496857 | 7.3:-35676102 | MS.gene000484:CDS |
| ACAGCTGTGATTGCTGAGAC+AGG | 0.499666 | 7.3:-35675679 | MS.gene000484:CDS |
| ATCGCGGTGGCTGGTTGGAT+CGG | 0.502733 | 7.3:+35678123 | None:intergenic |
| AGCTGTGATTGCTGAGACAG+GGG | 0.505266 | 7.3:-35675677 | MS.gene000484:CDS |
| GCAGTAAAACCTGTACTAGT+AGG | 0.506078 | 7.3:-35676198 | MS.gene000484:CDS |
| ATTGAGGTTGAAATTCATGA+TGG | 0.507826 | 7.3:-35675220 | MS.gene000484:CDS |
| AGCATTGGCTGTAACTTGCC+TGG | 0.508186 | 7.3:-35676706 | MS.gene000484:CDS |
| AGACGTCGGTGACGCCGACT+TGG | 0.509266 | 7.3:+35678052 | None:intergenic |
| CATAGGATATTTGTCCCAGA+TGG | 0.511574 | 7.3:-35675784 | MS.gene000484:CDS |
| GCTATTGGCAGCAGAAACTC+TGG | 0.513104 | 7.3:+35674897 | None:intergenic |
| GGTTCAATTGGATGGTCTGT+TGG | 0.514958 | 7.3:-35675493 | MS.gene000484:CDS |
| AAGCCTGTTTATATAAGCAT+TGG | 0.517974 | 7.3:-35676721 | MS.gene000484:CDS |
| AAAGGCTGTGGTGAATAACT+TGG | 0.518140 | 7.3:-35676797 | MS.gene000484:intron |
| AACATAACATTAACTCTCAA+AGG | 0.524430 | 7.3:+35675733 | None:intergenic |
| TTGCTGAGACAGGGGACTCA+TGG | 0.524993 | 7.3:-35675669 | MS.gene000484:CDS |
| ATCAGCAGATTCTACAATCT+CGG | 0.529867 | 7.3:+35676011 | None:intergenic |
| TGTTGTTACGTTCACTGTTG+GGG | 0.530989 | 7.3:-35677887 | MS.gene000484:CDS |
| TTAGCAACTACAACCCGATC+GGG | 0.533306 | 7.3:+35675898 | None:intergenic |
| AACACTTACCCACATCCCTC+AGG | 0.537513 | 7.3:+35675622 | None:intergenic |
| GCGGCCGAGTGTAGCGTCGC+AGG | 0.540411 | 7.3:+35678095 | None:intergenic |
| CATCTGGGACAAATATCCTA+TGG | 0.541696 | 7.3:+35675785 | None:intergenic |
| TATGCTCGGTCACGTGGTGT+CGG | 0.546337 | 7.3:-35677916 | MS.gene000484:CDS |
| AAGCAAAGAGCTGCTTGAGT+GGG | 0.547778 | 7.3:-35674923 | MS.gene000484:CDS |
| CAAGCAAAGAGCTGCTTGAG+TGG | 0.547979 | 7.3:-35674924 | MS.gene000484:CDS |
| AGTGTGAGGTTGAAGTCTCC+GGG | 0.552102 | 7.3:+35678021 | None:intergenic |
| GTGATTGCTTGCATTGGTGA+TGG | 0.552907 | 7.3:-35675430 | MS.gene000484:CDS |
| GCCTCCTGCGACGCTACACT+CGG | 0.559561 | 7.3:-35678099 | MS.gene000484:CDS |
| TGTTGTAACGAGCTGAATGC+TGG | 0.559989 | 7.3:-35677955 | MS.gene000484:CDS |
| ACTTCTTCTCAAGAAAGAGA+AGG | 0.560019 | 7.3:-35675935 | MS.gene000484:CDS |
| TGAAGTTTACTGAGGATTTG+GGG | 0.560721 | 7.3:+35674870 | None:intergenic |
| TCCTTTACAGGTAACTGCAC+AGG | 0.562828 | 7.3:-35675311 | MS.gene000484:intron |
| TGAAATGGGGATGGTGCTCA+GGG | 0.568384 | 7.3:+35676073 | None:intergenic |
| GCCGAGTGTAGCGTCGCAGG+AGG | 0.570351 | 7.3:+35678098 | None:intergenic |
| GGGACCATCCCTTTAGCTGA+TGG | 0.572399 | 7.3:+35676093 | None:intergenic |
| ATTGAGTAACCACATGGGGT+TGG | 0.573467 | 7.3:-35676259 | MS.gene000484:CDS |
| ATCATCTTCCTGATAAACAA+TGG | 0.575164 | 7.3:-35675253 | MS.gene000484:CDS |
| CCCTTTAGCTGATGGCATCA+CGG | 0.575591 | 7.3:+35676101 | None:intergenic |
| CTGCTTATGAAAATTACCAT+AGG | 0.576792 | 7.3:-35675801 | MS.gene000484:CDS |
| GCTCCGGTTCATTGACGAGA+TGG | 0.581139 | 7.3:+35677992 | None:intergenic |
| GATGCAATTCACAATGGTGA+AGG | 0.582372 | 7.3:-35675154 | MS.gene000484:CDS |
| GACGGTTATGCTCGGTCACG+TGG | 0.584252 | 7.3:-35677922 | MS.gene000484:CDS |
| CAGCTGTGATTGCTGAGACA+GGG | 0.585307 | 7.3:-35675678 | MS.gene000484:CDS |
| AAGCGAGTGATTGCTTGCAT+TGG | 0.587132 | 7.3:-35675436 | MS.gene000484:CDS |
| TCACGACTGAAAGTGGGATG+AGG | 0.587384 | 7.3:+35676679 | None:intergenic |
| ATCAAGAACTGGAATTACAC+TGG | 0.587582 | 7.3:-35675184 | MS.gene000484:CDS |
| ATCTAAAGATCCTAACATTG+TGG | 0.588263 | 7.3:+35678203 | None:intergenic |
| CTTGGACTAGTCGGCGTGCG+AGG | 0.589598 | 7.3:+35678070 | None:intergenic |
| GAGGTTGAAGTCTCCGGGAA+CGG | 0.591569 | 7.3:+35678026 | None:intergenic |
| ATGCGGCTGACGGTTATGCT+CGG | 0.592533 | 7.3:-35677930 | MS.gene000484:CDS |
| AAAGTGGGATGAGGAATACC+AGG | 0.593405 | 7.3:+35676688 | None:intergenic |
| GAACCGGAGCTGAACCTCAT+CGG | 0.594651 | 7.3:-35677979 | MS.gene000484:CDS |
| ATTAGCAACTACAACCCGAT+CGG | 0.598689 | 7.3:+35675897 | None:intergenic |
| CGAGCTGAATGCTGGTTATG+CGG | 0.602693 | 7.3:-35677947 | MS.gene000484:CDS |
| TTGTAGATTGAGTAACCACA+TGG | 0.603932 | 7.3:-35676265 | MS.gene000484:intron |
| ACAATGGTGAAGGAAAATGT+TGG | 0.606866 | 7.3:-35675144 | MS.gene000484:CDS |
| GTTCATTGACGAGATGGTCG+AGG | 0.607447 | 7.3:+35677998 | None:intergenic |
| GGACTAGTCGGCGTGCGAGG+TGG | 0.609593 | 7.3:+35678073 | None:intergenic |
| CAACCGATGAGGTTCAGCTC+CGG | 0.610804 | 7.3:+35677976 | None:intergenic |
| AATGCTGGTTATGCGGCTGA+CGG | 0.614053 | 7.3:-35677940 | MS.gene000484:CDS |
| AGGAAAATGTTGGACTACCA+AGG | 0.615414 | 7.3:-35675134 | MS.gene000484:intron |
| GAAGTTTACTGAGGATTTGG+GGG | 0.615619 | 7.3:+35674871 | None:intergenic |
| CGCATCAGCTAGTTCAACAA+AGG | 0.617624 | 7.3:+35676140 | None:intergenic |
| AGCAAAGAGCTGCTTGAGTG+GGG | 0.619453 | 7.3:-35674922 | MS.gene000484:CDS |
| AAGTTCCAATGAAATGGGGA+TGG | 0.619469 | 7.3:+35676064 | None:intergenic |
| AGCGTCGCAGGAGGCGATCG+CGG | 0.619577 | 7.3:+35678107 | None:intergenic |
| CAATGGAGGATACACAATTG+AGG | 0.623280 | 7.3:-35675236 | MS.gene000484:CDS |
| AGTAGGTGGTCCTAAACTGA+GGG | 0.628023 | 7.3:-35676181 | MS.gene000484:CDS |
| TGAAATTGCCTGAGGGATGT+GGG | 0.642606 | 7.3:-35675630 | MS.gene000484:intron |
| TGACGCCGACTTGGACTAGT+CGG | 0.644497 | 7.3:+35678061 | None:intergenic |
| CTGCTGCTTCCAACCCCATG+TGG | 0.646622 | 7.3:+35676250 | None:intergenic |
| GTTGTTACGTTCACTGTTGG+GGG | 0.649005 | 7.3:-35677886 | MS.gene000484:CDS |
| CGAGATGGTCGAGGAGTGTG+AGG | 0.649689 | 7.3:+35678007 | None:intergenic |
| GTTGAACTAGCTGATGCGAG+TGG | 0.652274 | 7.3:-35676135 | MS.gene000484:CDS |
| TAGTAGGTGGTCCTAAACTG+AGG | 0.652385 | 7.3:-35676182 | MS.gene000484:CDS |
| ACAGGATCACGACTGAAAGT+GGG | 0.654306 | 7.3:+35676673 | None:intergenic |
| AAGCAATCACTCGCTTCTCG+GGG | 0.655548 | 7.3:+35675443 | None:intergenic |
| AGGTGGTCCTAAACTGAGGG+TGG | 0.656562 | 7.3:-35676178 | MS.gene000484:CDS |
| CCACCAACAATACAAATAAG+CGG | 0.658046 | 7.3:+35677817 | None:intergenic |
| GATGCCATCAGCTAAAGGGA+TGG | 0.659243 | 7.3:-35676097 | MS.gene000484:CDS |
| CAATAAGTTCCAATGAAATG+GGG | 0.661557 | 7.3:+35676060 | None:intergenic |
| GGGGTTGGAAGCAGCAGTTG+AGG | 0.663030 | 7.3:-35676244 | MS.gene000484:CDS |
| GTAGATTGAGTAACCACATG+GGG | 0.665962 | 7.3:-35676263 | MS.gene000484:intron |
| GCTCGTTACAACAACCGATG+AGG | 0.668000 | 7.3:+35677965 | None:intergenic |
| GTCGCAGGAGGCGATCGCGG+TGG | 0.669288 | 7.3:+35678110 | None:intergenic |
| ATCTTCCTGATAAACAATGG+AGG | 0.670205 | 7.3:-35675250 | MS.gene000484:CDS |
| TTGTTACGTTCACTGTTGGG+GGG | 0.670836 | 7.3:-35677885 | MS.gene000484:CDS |
| ACCGACTCTGAAGTTTACTG+AGG | 0.674817 | 7.3:+35674862 | None:intergenic |
| GCACGCCGACTAGTCCAAGT+CGG | 0.675934 | 7.3:-35678066 | MS.gene000484:CDS |
| GTAAAACCTGTACTAGTAGG+TGG | 0.676238 | 7.3:-35676195 | MS.gene000484:CDS |
| TTGATTGATGCAATTCACAA+TGG | 0.677426 | 7.3:-35675160 | MS.gene000484:CDS |
| TGTAGATTGAGTAACCACAT+GGG | 0.679957 | 7.3:-35676264 | MS.gene000484:intron |
| GTGTCGACAATGCTGAGGTG+TGG | 0.686606 | 7.3:-35675286 | MS.gene000484:CDS |
| GGTGGCTGGTTGGATCGGAG+AGG | 0.716934 | 7.3:+35678128 | None:intergenic |
| AGGATGTGTCGACAATGCTG+AGG | 0.731840 | 7.3:-35675291 | MS.gene000484:CDS |
| TCCGGGAACGGAGAAGACGT+CGG | 0.744759 | 7.3:+35678038 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACGTTACATATTTGAATT+GGG | - | chr7.3:35676078-35676097 | MS.gene000484:CDS | 20.0% |
| !!! | AAAATTGTAGTAATTTTAGC+TGG | - | chr7.3:35675798-35675817 | MS.gene000484:CDS | 20.0% |
| !!! | GCTAAAATTACTACAATTTT+AGG | + | chr7.3:35675798-35675817 | None:intergenic | 20.0% |
| !!! | GTTTGATTTGATTTGATAAA+AGG | - | chr7.3:35676268-35676287 | MS.gene000484:intron | 20.0% |
| !!! | TGCTATATTTGTCATTTTTT+TGG | - | chr7.3:35675401-35675420 | MS.gene000484:intron | 20.0% |
| !!! | TTGTCATTTTTTTGGTTTTT+GGG | - | chr7.3:35675409-35675428 | MS.gene000484:intron | 20.0% |
| !!! | TTTGTCATTTTTTTGGTTTT+TGG | - | chr7.3:35675408-35675427 | MS.gene000484:intron | 20.0% |
| ! | AAAATCATGGTAATTTAAGC+TGG | - | chr7.3:35676155-35676174 | MS.gene000484:CDS | 25.0% |
| ! | AAATAGAGAAAGACTTACTT+GGG | + | chr7.3:35676452-35676471 | None:intergenic | 25.0% |
| ! | AACATAACATTAACTCTCAA+AGG | + | chr7.3:35677353-35677372 | None:intergenic | 25.0% |
| ! | ATATACTACATGTTTGAATC+GGG | - | chr7.3:35675722-35675741 | MS.gene000484:CDS | 25.0% |
| ! | CATACGTTACATATTTGAAT+TGG | - | chr7.3:35676077-35676096 | MS.gene000484:CDS | 25.0% |
| ! | CATATACTACATGTTTGAAT+CGG | - | chr7.3:35675721-35675740 | MS.gene000484:CDS | 25.0% |
| ! | TACGTTACATATTTGAATTG+GGG | - | chr7.3:35676079-35676098 | MS.gene000484:CDS | 25.0% |
| ! | TATGAGTTTCAAATGCAATA+TGG | - | chr7.3:35677569-35677588 | MS.gene000484:intron | 25.0% |
| ! | TCAAACATGTAGTATATGTT+TGG | + | chr7.3:35675719-35675738 | None:intergenic | 25.0% |
| ! | TCAAATATGTAACGTATGTT+TGG | + | chr7.3:35676075-35676094 | None:intergenic | 25.0% |
| ! | TCATCAACATTTCCAATAAT+CGG | + | chr7.3:35676770-35676789 | None:intergenic | 25.0% |
| !! | GCTTAAATTACCATGATTTT+AGG | + | chr7.3:35676155-35676174 | None:intergenic | 25.0% |
| !! | TAACTTTTACAAAATCACAG+TGG | + | chr7.3:35675991-35676010 | None:intergenic | 25.0% |
| AAACATAAGCTGTCTTTCTT+TGG | + | chr7.3:35678110-35678129 | None:intergenic | 30.0% | |
| AAGCCTGTTTATATAAGCAT+TGG | - | chr7.3:35676362-35676381 | MS.gene000484:intron | 30.0% | |
| AAGTTTGGTAGAATCACATT+GGG | + | chr7.3:35676699-35676718 | None:intergenic | 30.0% | |
| AATTACTGGAAATTGGAATG+AGG | + | chr7.3:35676478-35676497 | None:intergenic | 30.0% | |
| ACAACATCTGTTGTATATGT+TGG | + | chr7.3:35677376-35677395 | None:intergenic | 30.0% | |
| ACACTTAGCTGTTGTAAAAT+GGG | - | chr7.3:35675857-35675876 | MS.gene000484:CDS | 30.0% | |
| AGAGCTGTAGTCATTAAAAA+TGG | + | chr7.3:35677117-35677136 | None:intergenic | 30.0% | |
| AGGATTCTTCATCATACTAT+TGG | - | chr7.3:35675317-35675336 | MS.gene000484:intron | 30.0% | |
| ATCATCTTCCTGATAAACAA+TGG | - | chr7.3:35677830-35677849 | MS.gene000484:CDS | 30.0% | |
| ATCTAAAGATCCTAACATTG+TGG | + | chr7.3:35674883-35674902 | None:intergenic | 30.0% | |
| ATTGAGGTTGAAATTCATGA+TGG | - | chr7.3:35677863-35677882 | MS.gene000484:CDS | 30.0% | |
| ATTGTTTATCAGGAAGATGA+TGG | + | chr7.3:35677831-35677850 | None:intergenic | 30.0% | |
| CAAAAATTGAAATTGCCTGA+GGG | - | chr7.3:35677446-35677465 | MS.gene000484:intron | 30.0% | |
| CAAAATCATAGTAAGCACTA+TGG | - | chr7.3:35676027-35676046 | MS.gene000484:CDS | 30.0% | |
| CAAATAGAGAAAGACTTACT+TGG | + | chr7.3:35676453-35676472 | None:intergenic | 30.0% | |
| CAAATGCAATATGGTTCAAT+TGG | - | chr7.3:35677578-35677597 | MS.gene000484:intron | 30.0% | |
| CAATAAGTTCCAATGAAATG+GGG | + | chr7.3:35677026-35677045 | None:intergenic | 30.0% | |
| CATACAATGTTATCAAGAAC+TGG | - | chr7.3:35677888-35677907 | MS.gene000484:CDS | 30.0% | |
| CATTTCATTGGAACTTATTG+GGG | - | chr7.3:35677026-35677045 | MS.gene000484:intron | 30.0% | |
| CCAATAAGTTCCAATGAAAT+GGG | + | chr7.3:35677027-35677046 | None:intergenic | 30.0% | |
| CCATTTCATTGGAACTTATT+GGG | - | chr7.3:35677025-35677044 | MS.gene000484:intron | 30.0% | |
| CTGCTTATGAAAATTACCAT+AGG | - | chr7.3:35677282-35677301 | MS.gene000484:intron | 30.0% | |
| CTGTAAAGGATTTAAGAGAA+AGG | + | chr7.3:35677762-35677781 | None:intergenic | 30.0% | |
| CTTTCTCTTAAATCCTTTAC+AGG | - | chr7.3:35677760-35677779 | MS.gene000484:CDS | 30.0% | |
| GACCGAATTCTAATGATTAT+GGG | - | chr7.3:35675288-35675307 | MS.gene000484:CDS | 30.0% | |
| GAGCTGTAGTCATTAAAAAT+GGG | + | chr7.3:35677116-35677135 | None:intergenic | 30.0% | |
| GCACTTAGTTGTTGTAAAAT+GGG | - | chr7.3:35676222-35676241 | MS.gene000484:CDS | 30.0% | |
| GTCCCATAATCATTAGAATT+CGG | + | chr7.3:35675293-35675312 | None:intergenic | 30.0% | |
| GTTCAAATCATACAAGAATC+TGG | - | chr7.3:35676517-35676536 | MS.gene000484:intron | 30.0% | |
| TAAGTTAACAAGTGCATTTC+TGG | + | chr7.3:35676730-35676749 | None:intergenic | 30.0% | |
| TAAGTTTGGTAGAATCACAT+TGG | + | chr7.3:35676700-35676719 | None:intergenic | 30.0% | |
| TAATTTAAGCTGGTACATTG+TGG | - | chr7.3:35676165-35676184 | MS.gene000484:CDS | 30.0% | |
| TACACTTAGCTGTTGTAAAA+TGG | - | chr7.3:35675856-35675875 | MS.gene000484:CDS | 30.0% | |
| TATACTACATGTTTGAATCG+GGG | - | chr7.3:35675723-35675742 | MS.gene000484:CDS | 30.0% | |
| TCAAAAATTGAAATTGCCTG+AGG | - | chr7.3:35677445-35677464 | MS.gene000484:intron | 30.0% | |
| TGCACTTAGTTGTTGTAAAA+TGG | - | chr7.3:35676221-35676240 | MS.gene000484:CDS | 30.0% | |
| TTAACTTATGTGTGAAGAAG+AGG | - | chr7.3:35676742-35676761 | MS.gene000484:CDS | 30.0% | |
| TTGATTGATGCAATTCACAA+TGG | - | chr7.3:35677923-35677942 | MS.gene000484:CDS | 30.0% | |
| TTTGATGAAGGATTTCCTAA+AGG | - | chr7.3:35677229-35677248 | MS.gene000484:intron | 30.0% | |
| ! | ACTGATAAAATCTTGTTTGC+AGG | - | chr7.3:35677546-35677565 | MS.gene000484:intron | 30.0% |
| ! | CAGTTCTTGATAACATTGTA+TGG | + | chr7.3:35677890-35677909 | None:intergenic | 30.0% |
| ! | CTTGTTATAGAAGAAGTTTG+AGG | + | chr7.3:35678003-35678022 | None:intergenic | 30.0% |
| ! | TAGCTTTTACAAAATCACAG+TGG | + | chr7.3:35675613-35675632 | None:intergenic | 30.0% |
| ! | TTAACTCTCAAAGGTTCTTT+TGG | + | chr7.3:35677344-35677363 | None:intergenic | 30.0% |
| !! | AGTTGTTGTAAAATGGGTTT+TGG | - | chr7.3:35676228-35676247 | MS.gene000484:CDS | 30.0% |
| !! | ATTTGGATGCATTTTGATGA+AGG | - | chr7.3:35677217-35677236 | MS.gene000484:intron | 30.0% |
| !! | TTTGATTTGATAAAAGGCTG+TGG | - | chr7.3:35676274-35676293 | MS.gene000484:intron | 30.0% |
| !! | TTTTTGCTTTTGCGAAATCA+TGG | - | chr7.3:35675649-35675668 | MS.gene000484:CDS | 30.0% |
| !!! | AGGCTAGCTTTTGTTAAAAT+CGG | - | chr7.3:35676668-35676687 | MS.gene000484:CDS | 30.0% |
| !!! | TTTGGTGATTGTTTTGATTG+TGG | - | chr7.3:35676246-35676265 | MS.gene000484:CDS | 30.0% |
| AAACAAAGTCACTATGCATC+TGG | + | chr7.3:35675911-35675930 | None:intergenic | 35.0% | |
| ACAATGGTGAAGGAAAATGT+TGG | - | chr7.3:35677939-35677958 | MS.gene000484:CDS | 35.0% | |
| ACTTCTTCTCAAGAAAGAGA+AGG | - | chr7.3:35677148-35677167 | MS.gene000484:intron | 35.0% | |
| AGATGCATAGTGACTTTGTT+TGG | - | chr7.3:35675910-35675929 | MS.gene000484:CDS | 35.0% | |
| AGTGTTCTTAATGCTATAGC+TGG | - | chr7.3:35675224-35675243 | MS.gene000484:CDS | 35.0% | |
| ATCAAAATGCATCCAAATGC+AGG | + | chr7.3:35677215-35677234 | None:intergenic | 35.0% | |
| ATCAAGAACTGGAATTACAC+TGG | - | chr7.3:35677899-35677918 | MS.gene000484:CDS | 35.0% | |
| ATCAGCAGATTCTACAATCT+CGG | + | chr7.3:35677075-35677094 | None:intergenic | 35.0% | |
| ATCTTCCTGATAAACAATGG+AGG | - | chr7.3:35677833-35677852 | MS.gene000484:CDS | 35.0% | |
| CACTTAGCTGTTGTAAAATG+GGG | - | chr7.3:35675858-35675877 | MS.gene000484:CDS | 35.0% | |
| CAGCCAATGCTTATATAAAC+AGG | + | chr7.3:35676368-35676387 | None:intergenic | 35.0% | |
| CATTGAAGTGATTGTTCACA+AGG | - | chr7.3:35678130-35678149 | MS.gene000484:CDS | 35.0% | |
| CCACCAACAATACAAATAAG+CGG | + | chr7.3:35675269-35675288 | None:intergenic | 35.0% | |
| CCCAATAAGTTCCAATGAAA+TGG | + | chr7.3:35677028-35677047 | None:intergenic | 35.0% | |
| CCCATTTCATTGGAACTTAT+TGG | - | chr7.3:35677024-35677043 | MS.gene000484:intron | 35.0% | |
| CGAGATTGTTGAATCTTCAA+AGG | - | chr7.3:35676648-35676667 | MS.gene000484:intron | 35.0% | |
| GACACGTAATTACTGGAAAT+TGG | + | chr7.3:35676485-35676504 | None:intergenic | 35.0% | |
| GGACCGAATTCTAATGATTA+TGG | - | chr7.3:35675287-35675306 | MS.gene000484:CDS | 35.0% | |
| GTAGTCATTAAAAATGGGAC+CGG | + | chr7.3:35677111-35677130 | None:intergenic | 35.0% | |
| GTTTGAATTAGCTGCAAGTT+TGG | - | chr7.3:35676606-35676625 | MS.gene000484:intron | 35.0% | |
| TAGAAGAAGTTTGAGGAGAA+TGG | + | chr7.3:35677996-35678015 | None:intergenic | 35.0% | |
| TATCGAAGACACGTAATTAC+TGG | + | chr7.3:35676492-35676511 | None:intergenic | 35.0% | |
| TGCAATATGGTTCAATTGGA+TGG | - | chr7.3:35677582-35677601 | MS.gene000484:intron | 35.0% | |
| TGTAGATTGAGTAACCACAT+GGG | - | chr7.3:35676819-35676838 | MS.gene000484:intron | 35.0% | |
| TGTATCCTCCATTGTTTATC+AGG | + | chr7.3:35677841-35677860 | None:intergenic | 35.0% | |
| TGTGATTCTACCAAACTTAC+TGG | - | chr7.3:35676701-35676720 | MS.gene000484:CDS | 35.0% | |
| TTAATGACTACAGCTCTGTT+GGG | - | chr7.3:35677120-35677139 | MS.gene000484:intron | 35.0% | |
| TTGTAGATTGAGTAACCACA+TGG | - | chr7.3:35676818-35676837 | MS.gene000484:intron | 35.0% | |
| TTTAATGACTACAGCTCTGT+TGG | - | chr7.3:35677119-35677138 | MS.gene000484:intron | 35.0% | |
| TTTCTGGATTCCAGTAAGTT+TGG | + | chr7.3:35676714-35676733 | None:intergenic | 35.0% | |
| ! | ACTTCAAAGGTTTTCCATCT+GGG | + | chr7.3:35677316-35677335 | None:intergenic | 35.0% |
| ! | ACTTTGTTTGGTATCACAGA+CGG | - | chr7.3:35675922-35675941 | MS.gene000484:CDS | 35.0% |
| ! | CATCGTGTTTAAAGCAAGTT+TGG | + | chr7.3:35676570-35676589 | None:intergenic | 35.0% |
| ! | CTAATGATTATGGGACTAGT+AGG | - | chr7.3:35675297-35675316 | MS.gene000484:CDS | 35.0% |
| ! | TTCATGCATGCTTCATTTTC+AGG | - | chr7.3:35678037-35678056 | MS.gene000484:CDS | 35.0% |
| ! | TTGCCGCTTATTTGTATTGT+TGG | - | chr7.3:35675263-35675282 | MS.gene000484:CDS | 35.0% |
| !! | TCAGACTGTTACTTGTTTTC+AGG | - | chr7.3:35675373-35675392 | MS.gene000484:intron | 35.0% |
| !!! | GCTAGCTTTTGTTAAAATCG+GGG | - | chr7.3:35676670-35676689 | MS.gene000484:CDS | 35.0% |
| !!! | GGCTAGCTTTTGTTAAAATC+GGG | - | chr7.3:35676669-35676688 | MS.gene000484:CDS | 35.0% |
| !!! | TTTTCAGGTATTCTGTGAAG+AGG | - | chr7.3:35678052-35678071 | MS.gene000484:CDS | 35.0% |
| AAAGGCTGTGGTGAATAACT+TGG | - | chr7.3:35676286-35676305 | MS.gene000484:intron | 40.0% | |
| AAGTTCCAATGAAATGGGGA+TGG | + | chr7.3:35677022-35677041 | None:intergenic | 40.0% | |
| ACTTGGGAGCAAGTGAAAAA+GGG | + | chr7.3:35676436-35676455 | None:intergenic | 40.0% | |
| AGGAAAATGTTGGACTACCA+AGG | - | chr7.3:35677949-35677968 | MS.gene000484:CDS | 40.0% | |
| ATTAGCAACTACAACCCGAT+CGG | + | chr7.3:35677189-35677208 | None:intergenic | 40.0% | |
| CAACTAAGTGCATGCATGTT+TGG | + | chr7.3:35676213-35676232 | None:intergenic | 40.0% | |
| CAATGGAGGATACACAATTG+AGG | - | chr7.3:35677847-35677866 | MS.gene000484:CDS | 40.0% | |
| CAGCTAAGTGTATGCATGTT+TGG | + | chr7.3:35675848-35675867 | None:intergenic | 40.0% | |
| CAGTGAGTTTGACGAAATCA+TGG | + | chr7.3:35675691-35675710 | None:intergenic | 40.0% | |
| CATAGGATATTTGTCCCAGA+TGG | - | chr7.3:35677299-35677318 | MS.gene000484:intron | 40.0% | |
| CCGCTTATTTGTATTGTTGG+TGG | - | chr7.3:35675266-35675285 | MS.gene000484:CDS | 40.0% | |
| CTCAACTCCTGACTAAAATC+AGG | + | chr7.3:35675347-35675366 | None:intergenic | 40.0% | |
| GAAGAAGAGGAACCGATTAT+TGG | - | chr7.3:35676755-35676774 | MS.gene000484:CDS | 40.0% | |
| GATGCAATTCACAATGGTGA+AGG | - | chr7.3:35677929-35677948 | MS.gene000484:CDS | 40.0% | |
| GCAGTAAAACCTGTACTAGT+AGG | - | chr7.3:35676885-35676904 | MS.gene000484:intron | 40.0% | |
| GTAAAACCTGTACTAGTAGG+TGG | - | chr7.3:35676888-35676907 | MS.gene000484:intron | 40.0% | |
| GTAGATTGAGTAACCACATG+GGG | - | chr7.3:35676820-35676839 | MS.gene000484:intron | 40.0% | |
| TACACTGTCAAACTCACTAG+TGG | - | chr7.3:35675821-35675840 | MS.gene000484:CDS | 40.0% | |
| TACTTGGGAGCAAGTGAAAA+AGG | + | chr7.3:35676437-35676456 | None:intergenic | 40.0% | |
| TGAATTAGCTGCAAGTTTGG+TGG | - | chr7.3:35676609-35676628 | MS.gene000484:intron | 40.0% | |
| TGTACGCTGTCCTAAAATCA+TGG | - | chr7.3:35676142-35676161 | MS.gene000484:CDS | 40.0% | |
| TGTTGTTACGTTCACTGTTG+GGG | - | chr7.3:35675196-35675215 | MS.gene000484:CDS | 40.0% | |
| ! | AGCTTTTGTTAAAATCGGGG+TGG | - | chr7.3:35676673-35676692 | MS.gene000484:CDS | 40.0% |
| ! | CATCTGGGACAAATATCCTA+TGG | + | chr7.3:35677301-35677320 | None:intergenic | 40.0% |
| ! | GACTTCAAAGGTTTTCCATC+TGG | + | chr7.3:35677317-35677336 | None:intergenic | 40.0% |
| ! | GTGTTGTTACGTTCACTGTT+GGG | - | chr7.3:35675195-35675214 | MS.gene000484:CDS | 40.0% |
| ! | TGTGTTGTTACGTTCACTGT+TGG | - | chr7.3:35675194-35675213 | MS.gene000484:CDS | 40.0% |
| !! | CTGATTTTAGTCAGGAGTTG+AGG | - | chr7.3:35675345-35675364 | MS.gene000484:intron | 40.0% |
| !! | TCTTTTGGTGCAGACTTCAA+AGG | + | chr7.3:35677329-35677348 | None:intergenic | 40.0% |
| !! | TGGTGTTCCTGATTTTAGTC+AGG | - | chr7.3:35675337-35675356 | MS.gene000484:intron | 40.0% |
| AAAGTGGGATGAGGAATACC+AGG | + | chr7.3:35676398-35676417 | None:intergenic | 45.0% | |
| AAGCAAAGAGCTGCTTGAGT+GGG | - | chr7.3:35678160-35678179 | MS.gene000484:CDS | 45.0% | |
| AAGCGAGTGATTGCTTGCAT+TGG | - | chr7.3:35677647-35677666 | MS.gene000484:intron | 45.0% | |
| ACAGGATCACGACTGAAAGT+GGG | + | chr7.3:35676413-35676432 | None:intergenic | 45.0% | |
| AGTAGGTGGTCCTAAACTGA+GGG | - | chr7.3:35676902-35676921 | MS.gene000484:intron | 45.0% | |
| ATTGAGTAACCACATGGGGT+TGG | - | chr7.3:35676824-35676843 | MS.gene000484:intron | 45.0% | |
| CAATGTCAAACGACTCACCT+TGG | + | chr7.3:35677969-35677988 | None:intergenic | 45.0% | |
| CATGAAACGACGTCGTTGTT+TGG | + | chr7.3:35674918-35674937 | None:intergenic | 45.0% | |
| CGCATCAGCTAGTTCAACAA+AGG | + | chr7.3:35676946-35676965 | None:intergenic | 45.0% | |
| GAAGCAATTGCAACAGCAAC+AGG | - | chr7.3:35678083-35678102 | MS.gene000484:CDS | 45.0% | |
| GCTGATGCATACTTGTTTGC+CGG | - | chr7.3:35677089-35677108 | MS.gene000484:intron | 45.0% | |
| GGTTCAATTGGATGGTCTGT+TGG | - | chr7.3:35677590-35677609 | MS.gene000484:intron | 45.0% | |
| GTTGTTACGTTCACTGTTGG+GGG | - | chr7.3:35675197-35675216 | MS.gene000484:CDS | 45.0% | |
| TAGTAGGTGGTCCTAAACTG+AGG | - | chr7.3:35676901-35676920 | MS.gene000484:intron | 45.0% | |
| TCCTGTGCAGTTACCTGTAA+AGG | + | chr7.3:35677776-35677795 | None:intergenic | 45.0% | |
| TCCTTTACAGGTAACTGCAC+AGG | - | chr7.3:35677772-35677791 | MS.gene000484:CDS | 45.0% | |
| TGAAATTGCCTGAGGGATGT+GGG | - | chr7.3:35677453-35677472 | MS.gene000484:intron | 45.0% | |
| TGTTGTAACGAGCTGAATGC+TGG | - | chr7.3:35675128-35675147 | MS.gene000484:intron | 45.0% | |
| TGTTTGGTATCACAGACGGT+TGG | - | chr7.3:35675926-35675945 | MS.gene000484:CDS | 45.0% | |
| TTAGCAACTACAACCCGATC+GGG | + | chr7.3:35677188-35677207 | None:intergenic | 45.0% | |
| TTAGGACCACCTACTAGTAC+AGG | + | chr7.3:35676897-35676916 | None:intergenic | 45.0% | |
| TTGAAATTGCCTGAGGGATG+TGG | - | chr7.3:35677452-35677471 | MS.gene000484:intron | 45.0% | |
| TTGTTACGTTCACTGTTGGG+GGG | - | chr7.3:35675198-35675217 | MS.gene000484:CDS | 45.0% | |
| ! | CAAGTTTGGTGGAATCATGC+TGG | - | chr7.3:35676620-35676639 | MS.gene000484:intron | 45.0% |
| ! | GACGGTTGGTCAGATTATAG+TGG | - | chr7.3:35675940-35675959 | MS.gene000484:CDS | 45.0% |
| ! | GATCGGGTTGTAGTTGCTAA+TGG | - | chr7.3:35677188-35677207 | MS.gene000484:intron | 45.0% |
| ! | GTGATTGCTTGCATTGGTGA+TGG | - | chr7.3:35677653-35677672 | MS.gene000484:intron | 45.0% |
| ! | GTTGCTAATGGACCTGCATT+TGG | - | chr7.3:35677200-35677219 | MS.gene000484:intron | 45.0% |
| !! | CATTGGTGATGGAAGCTTTC+AGG | - | chr7.3:35677664-35677683 | MS.gene000484:intron | 45.0% |
| AACACTTACCCACATCCCTC+AGG | + | chr7.3:35677464-35677483 | None:intergenic | 50.0% | |
| AAGCAATCACTCGCTTCTCG+GGG | + | chr7.3:35677643-35677662 | None:intergenic | 50.0% | |
| AATCATTGTGCAGCCCGATC+GGG | - | chr7.3:35677172-35677191 | MS.gene000484:intron | 50.0% | |
| ACAGCTGTGATTGCTGAGAC+AGG | - | chr7.3:35677404-35677423 | MS.gene000484:intron | 50.0% | |
| AGCAAAGAGCTGCTTGAGTG+GGG | - | chr7.3:35678161-35678180 | MS.gene000484:CDS | 50.0% | |
| AGCTGTGATTGCTGAGACAG+GGG | - | chr7.3:35677406-35677425 | MS.gene000484:intron | 50.0% | |
| AGTGTGAGGTTGAAGTCTCC+GGG | + | chr7.3:35675065-35675084 | None:intergenic | 50.0% | |
| ATGAAATGGGGATGGTGCTC+AGG | + | chr7.3:35677014-35677033 | None:intergenic | 50.0% | |
| CAAGCAAAGAGCTGCTTGAG+TGG | - | chr7.3:35678159-35678178 | MS.gene000484:CDS | 50.0% | |
| CAAGCAATCACTCGCTTCTC+GGG | + | chr7.3:35677644-35677663 | None:intergenic | 50.0% | |
| CAATCATTGTGCAGCCCGAT+CGG | - | chr7.3:35677171-35677190 | MS.gene000484:intron | 50.0% | |
| CAGCTGTGATTGCTGAGACA+GGG | - | chr7.3:35677405-35677424 | MS.gene000484:intron | 50.0% | |
| CCCTTTAGCTGATGGCATCA+CGG | + | chr7.3:35676985-35677004 | None:intergenic | 50.0% | |
| CCGTGATGCCATCAGCTAAA+GGG | - | chr7.3:35676982-35677001 | MS.gene000484:intron | 50.0% | |
| CGACCATCTCGTCAATGAAC+CGG | - | chr7.3:35675088-35675107 | MS.gene000484:intron | 50.0% | |
| GACAGGATCACGACTGAAAG+TGG | + | chr7.3:35676414-35676433 | None:intergenic | 50.0% | |
| GAGCACCATCCCCATTTCAT+TGG | - | chr7.3:35677014-35677033 | MS.gene000484:intron | 50.0% | |
| GAGTGTGAGGTTGAAGTCTC+CGG | + | chr7.3:35675066-35675085 | None:intergenic | 50.0% | |
| GATGCCATCAGCTAAAGGGA+TGG | - | chr7.3:35676986-35677005 | MS.gene000484:intron | 50.0% | |
| GCAAGCAATCACTCGCTTCT+CGG | + | chr7.3:35677645-35677664 | None:intergenic | 50.0% | |
| GCTATTGGCAGCAGAAACTC+TGG | + | chr7.3:35678189-35678208 | None:intergenic | 50.0% | |
| GCTCGTTACAACAACCGATG+AGG | + | chr7.3:35675121-35675140 | None:intergenic | 50.0% | |
| GGAGCAAGTGAAAAAGGGAC+AGG | + | chr7.3:35676431-35676450 | None:intergenic | 50.0% | |
| GTTCATTGACGAGATGGTCG+AGG | + | chr7.3:35675088-35675107 | None:intergenic | 50.0% | |
| GTTGAACTAGCTGATGCGAG+TGG | - | chr7.3:35676948-35676967 | MS.gene000484:intron | 50.0% | |
| TCACGACTGAAAGTGGGATG+AGG | + | chr7.3:35676407-35676426 | None:intergenic | 50.0% | |
| TGAAATGGGGATGGTGCTCA+GGG | + | chr7.3:35677013-35677032 | None:intergenic | 50.0% | |
| TGGTCTGTTGGTGCAACTCT+TGG | - | chr7.3:35677602-35677621 | MS.gene000484:intron | 50.0% | |
| ! | AATGCTGGTTATGCGGCTGA+CGG | - | chr7.3:35675143-35675162 | MS.gene000484:CDS | 50.0% |
| ! | AGGATGTGTCGACAATGCTG+AGG | - | chr7.3:35677792-35677811 | MS.gene000484:CDS | 50.0% |
| ! | CGAGCTGAATGCTGGTTATG+CGG | - | chr7.3:35675136-35675155 | MS.gene000484:CDS | 50.0% |
| !! | AGCATTGGCTGTAACTTGCC+TGG | - | chr7.3:35676377-35676396 | MS.gene000484:intron | 50.0% |
| AGGATTTGGGGGACGGCTAT+TGG | + | chr7.3:35678204-35678223 | None:intergenic | 55.0% | |
| AGGTGGTCCTAAACTGAGGG+TGG | - | chr7.3:35676905-35676924 | MS.gene000484:intron | 55.0% | |
| ATGCGGCTGACGGTTATGCT+CGG | - | chr7.3:35675153-35675172 | MS.gene000484:CDS | 55.0% | |
| CAACCGATGAGGTTCAGCTC+CGG | + | chr7.3:35675110-35675129 | None:intergenic | 55.0% | |
| GAACCGGAGCTGAACCTCAT+CGG | - | chr7.3:35675104-35675123 | MS.gene000484:intron | 55.0% | |
| GACGCTTCGCAAGTGCCTTT+AGG | + | chr7.3:35677247-35677266 | None:intergenic | 55.0% | |
| GAGGTTGAAGTCTCCGGGAA+CGG | + | chr7.3:35675060-35675079 | None:intergenic | 55.0% | |
| GCCGTGATGCCATCAGCTAA+AGG | - | chr7.3:35676981-35677000 | MS.gene000484:intron | 55.0% | |
| GCTCCGGTTCATTGACGAGA+TGG | + | chr7.3:35675094-35675113 | None:intergenic | 55.0% | |
| GCTTTCGCCACCCTCAGTTT+AGG | + | chr7.3:35676915-35676934 | None:intergenic | 55.0% | |
| GGGACCATCCCTTTAGCTGA+TGG | + | chr7.3:35676993-35677012 | None:intergenic | 55.0% | |
| TATGCTCGGTCACGTGGTGT+CGG | - | chr7.3:35675167-35675186 | MS.gene000484:CDS | 55.0% | |
| TTGCTGAGACAGGGGACTCA+TGG | - | chr7.3:35677414-35677433 | MS.gene000484:intron | 55.0% | |
| ! | GTGTCGACAATGCTGAGGTG+TGG | - | chr7.3:35677797-35677816 | MS.gene000484:CDS | 55.0% |
| !! | TGACGCCGACTTGGACTAGT+CGG | + | chr7.3:35675025-35675044 | None:intergenic | 55.0% |
| ACCGACGTCTTCTCCGTTCC+CGG | - | chr7.3:35675044-35675063 | MS.gene000484:intron | 60.0% | |
| GACGGTTATGCTCGGTCACG+TGG | - | chr7.3:35675161-35675180 | MS.gene000484:CDS | 60.0% | |
| GGGGTTGGAAGCAGCAGTTG+AGG | - | chr7.3:35676839-35676858 | MS.gene000484:intron | 60.0% | |
| TCCGGGAACGGAGAAGACGT+CGG | + | chr7.3:35675048-35675067 | None:intergenic | 60.0% | |
| ! | ATCGCGGTGGCTGGTTGGAT+CGG | + | chr7.3:35674963-35674982 | None:intergenic | 60.0% |
| ! | CGAGATGGTCGAGGAGTGTG+AGG | + | chr7.3:35675079-35675098 | None:intergenic | 60.0% |
| ! | CTGCTGCTTCCAACCCCATG+TGG | + | chr7.3:35676836-35676855 | None:intergenic | 60.0% |
| ! | GCACGCCGACTAGTCCAAGT+CGG | - | chr7.3:35675017-35675036 | MS.gene000484:CDS | 60.0% |
| GCCTCCTGCGACGCTACACT+CGG | - | chr7.3:35674984-35675003 | MS.gene000484:CDS | 65.0% | |
| ! | AGACGTCGGTGACGCCGACT+TGG | + | chr7.3:35675034-35675053 | None:intergenic | 65.0% |
| ! | GGTGGCTGGTTGGATCGGAG+AGG | + | chr7.3:35674958-35674977 | None:intergenic | 65.0% |
| !! | CTTGGACTAGTCGGCGTGCG+AGG | + | chr7.3:35675016-35675035 | None:intergenic | 65.0% |
| AGCGTCGCAGGAGGCGATCG+CGG | + | chr7.3:35674979-35674998 | None:intergenic | 70.0% | |
| AGGCGATCGCGGTGGCTGGT+TGG | + | chr7.3:35674968-35674987 | None:intergenic | 70.0% | |
| CTAGTCGGCGTGCGAGGTGG+CGG | + | chr7.3:35675010-35675029 | None:intergenic | 70.0% | |
| GCCGAGTGTAGCGTCGCAGG+AGG | + | chr7.3:35674988-35675007 | None:intergenic | 70.0% | |
| !! | GGACTAGTCGGCGTGCGAGG+TGG | + | chr7.3:35675013-35675032 | None:intergenic | 70.0% |
| CAGGAGGCGATCGCGGTGGC+TGG | + | chr7.3:35674972-35674991 | None:intergenic | 75.0% | |
| GCGGCCGAGTGTAGCGTCGC+AGG | + | chr7.3:35674991-35675010 | None:intergenic | 75.0% | |
| GTCGCAGGAGGCGATCGCGG+TGG | + | chr7.3:35674976-35674995 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 35674876 | 35678229 | 35674876 | ID=MS.gene000484 |
| chr7.3 | mRNA | 35674876 | 35678229 | 35674876 | ID=MS.gene000484.t1;Parent=MS.gene000484 |
| chr7.3 | exon | 35677711 | 35678229 | 35677711 | ID=MS.gene000484.t1.exon1;Parent=MS.gene000484.t1 |
| chr7.3 | CDS | 35677711 | 35678229 | 35677711 | ID=cds.MS.gene000484.t1;Parent=MS.gene000484.t1 |
| chr7.3 | exon | 35676652 | 35676815 | 35676652 | ID=MS.gene000484.t1.exon2;Parent=MS.gene000484.t1 |
| chr7.3 | CDS | 35676652 | 35676815 | 35676652 | ID=cds.MS.gene000484.t1;Parent=MS.gene000484.t1 |
| chr7.3 | exon | 35675631 | 35676281 | 35675631 | ID=MS.gene000484.t1.exon3;Parent=MS.gene000484.t1 |
| chr7.3 | CDS | 35675631 | 35676281 | 35675631 | ID=cds.MS.gene000484.t1;Parent=MS.gene000484.t1 |
| chr7.3 | exon | 35675420 | 35675537 | 35675420 | ID=MS.gene000484.t1.exon4;Parent=MS.gene000484.t1 |
| chr7.3 | CDS | 35675420 | 35675537 | 35675420 | ID=cds.MS.gene000484.t1;Parent=MS.gene000484.t1 |
| chr7.3 | exon | 35675135 | 35675323 | 35675135 | ID=MS.gene000484.t1.exon5;Parent=MS.gene000484.t1 |
| chr7.3 | CDS | 35675135 | 35675323 | 35675135 | ID=cds.MS.gene000484.t1;Parent=MS.gene000484.t1 |
| chr7.3 | exon | 35674876 | 35675046 | 35674876 | ID=MS.gene000484.t1.exon6;Parent=MS.gene000484.t1 |
| chr7.3 | CDS | 35674876 | 35675046 | 35674876 | ID=cds.MS.gene000484.t1;Parent=MS.gene000484.t1 |
| Gene Sequence |
| Protein sequence |
