AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02651

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02651.t1 MTR_3g089940 99.737 380 1 0 1 380 1 380 0.0 784
MS.gene02651.t1 MTR_3g089940 98.684 380 5 0 1 380 1 380 0.0 777
MS.gene02651.t1 MTR_3g089977 97.895 380 8 0 1 380 1 380 0.0 776
MS.gene02651.t1 MTR_3g089970 97.889 379 8 0 2 380 3 381 0.0 769
MS.gene02651.t1 MTR_3g089940 100.000 342 0 0 1 342 1 342 0.0 708
MS.gene02651.t1 MTR_3g089940 98.830 342 4 0 1 342 1 342 0.0 700
MS.gene02651.t1 MTR_7g099040 59.151 377 154 0 2 378 3 379 1.24e-170 481
MS.gene02651.t1 MTR_1g069430 57.181 376 161 0 3 378 2 377 1.89e-165 468
MS.gene02651.t1 MTR_6g068930 51.451 379 180 2 2 380 3 377 2.60e-143 412
MS.gene02651.t1 MTR_7g068320 49.086 383 189 5 1 378 12 393 8.90e-128 373
MS.gene02651.t1 MTR_7g068330 48.556 381 191 4 2 378 6 385 3.38e-127 371
MS.gene02651.t1 MTR_3g099460 50.132 379 183 4 6 379 13 390 4.22e-121 356
MS.gene02651.t1 MTR_5g087710 45.550 382 204 4 2 380 11 391 7.77e-121 355
MS.gene02651.t1 MTR_3g099460 49.604 379 178 5 6 379 13 383 5.27e-117 345
MS.gene02651.t1 MTR_3g079180 43.158 380 214 2 2 379 6 385 2.42e-110 328
MS.gene02651.t1 MTR_3g099460 49.379 322 159 3 61 379 7 327 8.42e-97 291
MS.gene02651.t1 MTR_0001s0660 39.842 379 218 5 3 378 2 373 5.05e-90 279
MS.gene02651.t1 MTR_5g045710 39.474 380 222 6 1 378 1 374 1.67e-89 275
MS.gene02651.t1 MTR_3g099460 52.650 283 128 4 6 283 13 294 4.49e-85 261
MS.gene02651.t1 MTR_3g099460 51.943 283 123 5 6 283 13 287 8.35e-81 250
MS.gene02651.t1 MTR_3g079170 42.182 275 137 4 101 370 25 282 2.16e-69 220
MS.gene02651.t1 MTR_5g045710 36.735 294 182 3 86 378 1 291 1.43e-61 200
MS.gene02651.t1 MTR_8g095220 31.053 380 239 15 12 378 55 424 4.43e-44 158
MS.gene02651.t1 MTR_8g095220 30.859 256 163 8 12 258 55 305 1.66e-31 121
MS.gene02651.t1 MTR_6g465010 25.405 370 224 13 16 369 3 336 7.80e-22 95.9
MS.gene02651.t1 MTR_6g466320 25.405 370 224 13 16 369 19 352 8.74e-22 95.9
MS.gene02651.t1 MTR_6g465010 25.405 370 224 13 16 369 19 352 8.74e-22 95.9
MS.gene02651.t1 MTR_5g031190 23.913 368 237 14 12 370 11 344 1.86e-13 71.2
MS.gene02651.t1 MTR_5g031390 24.484 339 218 9 37 370 39 344 8.66e-13 69.3
MS.gene02651.t1 MTR_4g115300 25.369 339 215 9 37 370 39 344 9.93e-13 69.3
MS.gene02651.t1 MTR_5g031230 23.894 339 220 10 37 370 39 344 1.07e-11 65.9
MS.gene02651.t1 MTR_5g031210 24.702 336 221 10 37 370 39 344 4.43e-11 64.3
MS.gene02651.t1 MTR_1g025950 22.599 354 207 10 37 370 38 344 4.57e-11 63.9
MS.gene02651.t1 MTR_5g031250 22.552 337 227 10 37 370 39 344 6.42e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02651.t1 AT1G77120 84.840 376 57 0 3 378 2 377 0.0 675
MS.gene02651.t1 AT5G43940 58.824 374 154 0 3 376 2 375 1.96e-168 476
MS.gene02651.t1 AT5G43940 56.736 386 155 1 3 376 2 387 2.93e-164 465
MS.gene02651.t1 AT5G24760 52.419 372 173 2 7 378 12 379 6.34e-147 421
MS.gene02651.t1 AT1G32780 50.256 390 184 2 1 380 1 390 3.95e-142 409
MS.gene02651.t1 AT1G64710 50.000 378 186 2 4 378 3 380 4.23e-142 409
MS.gene02651.t1 AT5G24760 51.130 354 169 2 25 378 1 350 8.05e-136 392
MS.gene02651.t1 AT5G24760 51.130 354 169 2 25 378 1 350 8.05e-136 392
MS.gene02651.t1 AT1G64710 48.459 357 181 2 25 378 1 357 7.71e-130 377
MS.gene02651.t1 AT5G42250 46.917 373 195 3 9 378 17 389 9.52e-120 352
MS.gene02651.t1 AT1G22440 49.096 387 184 6 2 380 5 386 2.06e-119 351
MS.gene02651.t1 AT1G22430 47.258 383 199 3 1 380 6 388 3.90e-117 345
MS.gene02651.t1 AT1G22430 47.258 383 199 3 1 380 6 388 3.90e-117 345
MS.gene02651.t1 AT4G22110 47.244 381 192 4 6 380 12 389 2.52e-114 338
MS.gene02651.t1 AT4G22110 47.244 381 192 4 6 380 12 389 2.52e-114 338
MS.gene02651.t1 AT1G64710 47.386 306 159 1 75 378 6 311 3.28e-107 317
MS.gene02651.t1 AT5G24760 47.368 266 139 1 113 378 1 265 1.26e-92 279
MS.gene02651.t1 AT1G22430 51.049 286 137 3 1 283 6 291 6.81e-91 276
MS.gene02651.t1 AT1G22430 52.610 249 116 2 1 247 6 254 2.51e-82 253
MS.gene02651.t1 AT1G22430 52.610 249 116 2 1 247 6 254 2.51e-82 253
MS.gene02651.t1 AT4G22110 52.439 246 109 3 6 246 12 254 1.86e-77 240
MS.gene02651.t1 AT5G63620 30.027 373 239 13 12 372 57 419 1.24e-39 146
MS.gene02651.t1 AT5G63620 29.380 371 244 11 12 372 57 419 3.57e-39 145
MS.gene02651.t1 AT5G63620 29.719 249 162 7 12 251 57 301 7.89e-28 112
MS.gene02651.t1 AT5G51970 23.711 388 242 14 1 371 6 356 8.37e-19 87.4
MS.gene02651.t1 AT5G51970 23.711 388 242 14 1 371 6 356 8.37e-19 87.4
MS.gene02651.t1 AT1G72680 24.665 373 246 9 1 370 1 341 2.58e-14 73.9
MS.gene02651.t1 AT4G37990 24.444 315 207 8 37 346 35 323 2.66e-12 67.8

Find 108 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTCATCTGTTGCTATCTT+TGG 0.236969 3.1:+72373304 MS.gene02651:CDS
ACGGGTTTGTCATGATCTTT+TGG 0.242014 3.1:-72373635 None:intergenic
GTCATACTGATGTTTACTTC+TGG 0.242164 3.1:+72371052 MS.gene02651:CDS
GCTTTGTTAATCTCTGAAAA+TGG 0.242441 3.1:-72374277 None:intergenic
GGGTTTGTAATTACCATAAA+AGG 0.258930 3.1:-72374065 None:intergenic
GTTTCTAGCCGATTTGAATT+AGG 0.268437 3.1:+72373491 MS.gene02651:CDS
TGGTCTCAGCTAAGAAGTTT+GGG 0.291376 3.1:+72373594 MS.gene02651:intron
CTTTCATTCAACAAATTCAT+AGG 0.292860 3.1:-72374028 None:intergenic
TTGGTCTCAGCTAAGAAGTT+TGG 0.297490 3.1:+72373593 MS.gene02651:intron
TCAGTCAAGATTCTCTATTA+AGG 0.310729 3.1:+72372738 MS.gene02651:CDS
GCAACATGTGTGATCTTCTT+AGG 0.311495 3.1:+72372680 MS.gene02651:CDS
TGGGGTGTTGCTGTACTTGT+TGG 0.336473 3.1:+72373971 MS.gene02651:CDS
ATGTACTTCTCTACAACATT+AGG 0.344846 3.1:-72374100 None:intergenic
TTGAATGCATCATCTTTGTT+TGG 0.346611 3.1:-72373998 None:intergenic
GCTGAAGGAGCAAGGATATC+TGG 0.347450 3.1:+72373440 MS.gene02651:CDS
GTTGAATGAAAGGACTCTTA+AGG 0.347627 3.1:+72374039 MS.gene02651:CDS
ATCTTTGGACTTGGAGCTGT+TGG 0.351212 3.1:+72373319 MS.gene02651:CDS
ACTTTGTCAAGTGGTGCATC+AGG 0.352356 3.1:-72372844 None:intergenic
TTGAATGAAAGGACTCTTAA+GGG 0.375052 3.1:+72374040 MS.gene02651:CDS
GCAACAGATGAACCGGGTTT+CGG 0.376365 3.1:-72373295 None:intergenic
TATCTGCAGCTGCGGTTGCA+TGG 0.381586 3.1:+72370938 MS.gene02651:intron
GCTGCGGTTGCATGGGAGGC+GGG 0.386440 3.1:+72370946 MS.gene02651:intron
TCATACTGATGTTTACTTCT+GGG 0.391708 3.1:+72371053 MS.gene02651:CDS
GGCGGGGAAGCCGCTGGTGA+TGG 0.393519 3.1:+72370963 MS.gene02651:CDS
TGTTGAACTAACCTGTTGTA+CGG 0.403420 3.1:-72373654 None:intergenic
AGCTGCGGTTGCATGGGAGG+CGG 0.413137 3.1:+72370945 MS.gene02651:intron
AAAGATAGCAACAGATGAAC+CGG 0.416086 3.1:-72373302 None:intergenic
TCTGTTGCTATCTTTGGACT+TGG 0.419387 3.1:+72373310 MS.gene02651:CDS
CAGTCAAGATTCTCTATTAA+GGG 0.430904 3.1:+72372739 MS.gene02651:CDS
TCATGACAAACCCGTACAAC+AGG 0.433809 3.1:+72373643 MS.gene02651:CDS
GATCGTGCTGTTGAATGTAC+TGG 0.436537 3.1:+72373813 MS.gene02651:CDS
ATCTGCAGCTGCGGTTGCAT+GGG 0.438978 3.1:+72370939 MS.gene02651:intron
TTGTAGAGAAGTACATGAAA+GGG 0.451043 3.1:+72374107 MS.gene02651:CDS
TCTGGTGCATCAAGAATCAT+TGG 0.451804 3.1:+72373458 MS.gene02651:CDS
GTAATTGCTGAAATGACAAA+TGG 0.467912 3.1:+72373783 MS.gene02651:CDS
TTTCGGCTTAGCAACATTGA+TGG 0.472708 3.1:-72373278 None:intergenic
CCACACTCCCCTGTGAATAC+AGG 0.474104 3.1:-72372628 None:intergenic
CCTGTATTCACAGGGGAGTG+TGG 0.474817 3.1:+72372628 MS.gene02651:CDS
CATGCCCTGCCTGTATTCAC+AGG 0.480140 3.1:+72372619 MS.gene02651:CDS
GCCGCTGGTGATGGAGGAAG+TGG 0.480972 3.1:+72370972 MS.gene02651:CDS
ACAGGCAGGGCATGATCCCC+TGG 0.483648 3.1:-72372610 None:intergenic
CTGTATTCACAGGGGAGTGT+GGG 0.483700 3.1:+72372629 MS.gene02651:CDS
TTCTTAGGATCAACACTGAC+AGG 0.485136 3.1:+72372695 MS.gene02651:CDS
TGCAGCTGCGGTTGCATGGG+AGG 0.488595 3.1:+72370942 MS.gene02651:intron
ATGGGAGGCGGGGAAGCCGC+TGG 0.490732 3.1:+72370957 MS.gene02651:CDS
CTATGAATTTGTTGAATGAA+AGG 0.494743 3.1:+72374029 MS.gene02651:CDS
CATTCGGATGATGCATCTGA+TGG 0.504913 3.1:-72374326 None:intergenic
ACATTCGAAAGCTGAGATCA+TGG 0.510392 3.1:-72373847 None:intergenic
TTTCATTCAACAAATTCATA+GGG 0.514951 3.1:-72374027 None:intergenic
TAAGTCATGTCGAGTACAGC+TGG 0.515258 3.1:+72369742 None:intergenic
GTTGAACTAACCTGTTGTAC+GGG 0.516621 3.1:-72373653 None:intergenic
AACATTAGGAAGATCAGTGC+GGG 0.517924 3.1:-72374086 None:intergenic
TACAAATTTCAGGCTGCTGA+AGG 0.521714 3.1:+72373425 MS.gene02651:intron
GCATTGTACCTAATTCAAAT+CGG 0.523873 3.1:-72373499 None:intergenic
CTGCGGTTGCATGGGAGGCG+GGG 0.533283 3.1:+72370947 MS.gene02651:CDS
GGTGATGGAGGAAGTGGAGG+TGG 0.533501 3.1:+72370978 MS.gene02651:CDS
GGGGAAGCCGCTGGTGATGG+AGG 0.533706 3.1:+72370966 MS.gene02651:CDS
GTTGTAGAGAAGTACATGAA+AGG 0.537144 3.1:+72374106 MS.gene02651:CDS
GAATATACTGTTGTTCATGC+TGG 0.538058 3.1:+72372802 MS.gene02651:CDS
CTCAGCTGTGGAATATGCAC+AGG 0.542001 3.1:+72372874 MS.gene02651:CDS
TGTTTACTTCTGGGAAGCTA+AGG 0.543162 3.1:+72371062 MS.gene02651:CDS
AGACGGACTTCACCGGCTTG+TGG 0.546092 3.1:-72371006 None:intergenic
GTAAACATCAGTATGACAAA+GGG 0.554993 3.1:-72371046 None:intergenic
GTGCCGACGAAATGATGAAT+GGG 0.557629 3.1:-72372766 None:intergenic
AAAGTTTGTATTCTCAGCTG+TGG 0.560671 3.1:+72372862 MS.gene02651:CDS
TATCTTGAGACGGACTTCAC+CGG 0.564597 3.1:-72371013 None:intergenic
AGTAAACATCAGTATGACAA+AGG 0.570922 3.1:-72371047 None:intergenic
TGTGCCGACGAAATGATGAA+TGG 0.574064 3.1:-72372767 None:intergenic
CGAAAGCTGAGATCATGGCC+TGG 0.579058 3.1:-72373842 None:intergenic
ACTCCCCTGTGAATACAGGC+AGG 0.579461 3.1:-72372624 None:intergenic
CATGATGTTGATCAGGATTG+TGG 0.581178 3.1:+72372555 MS.gene02651:intron
TTCAGGCTGCTGAAGGAGCA+AGG 0.586031 3.1:+72373432 MS.gene02651:intron
CATCAGATGCATCATCCGAA+TGG 0.586918 3.1:+72374327 MS.gene02651:CDS
CAGCCCATTCATCATTTCGT+CGG 0.590024 3.1:+72372763 MS.gene02651:CDS
TGTATTCACAGGGGAGTGTG+GGG 0.591767 3.1:+72372630 MS.gene02651:CDS
CTTTGTCAAGTGGTGCATCA+GGG 0.593942 3.1:-72372843 None:intergenic
GATTGTGGAGAGCGTAGGCG+AGG 0.594735 3.1:+72372570 MS.gene02651:CDS
AGAATACAAACTTTGTCAAG+TGG 0.596408 3.1:-72372853 None:intergenic
TGAATGTACTGGGAGCATCC+AGG 0.596660 3.1:+72373824 MS.gene02651:CDS
GAGGTGGCGCCACCACAAGC+CGG 0.599089 3.1:+72370994 MS.gene02651:CDS
AATGTTGCTAAGCCGAAACC+CGG 0.606869 3.1:+72373283 MS.gene02651:CDS
ATCGTGCTGTTGAATGTACT+GGG 0.609310 3.1:+72373814 MS.gene02651:CDS
GTGTGACACATCTAAAACCA+GGG 0.609545 3.1:+72372593 MS.gene02651:CDS
CGGACTTCACCGGCTTGTGG+TGG 0.618100 3.1:-72371003 None:intergenic
CTGTCCACATTGTAAGTCAG+AGG 0.618115 3.1:+72372654 MS.gene02651:CDS
CAGATGCATCATCCGAATGG+AGG 0.625117 3.1:+72374330 MS.gene02651:CDS
TGTAGAGAAGTACATGAAAG+GGG 0.626357 3.1:+72374108 MS.gene02651:CDS
AACATCAGTATGACAAAGGG+AGG 0.627239 3.1:-72371043 None:intergenic
GCTGGTGATGGAGGAAGTGG+AGG 0.628022 3.1:+72370975 MS.gene02651:CDS
GGTGTGACACATCTAAAACC+AGG 0.629311 3.1:+72372592 MS.gene02651:CDS
GGTCAAGTCATCAAATGCAA+AGG 0.634446 3.1:+72369763 MS.gene02651:CDS
CTCTCCTCTGACTTACAATG+TGG 0.634714 3.1:-72372658 None:intergenic
ATGCCCTGCCTGTATTCACA+GGG 0.640094 3.1:+72372620 MS.gene02651:CDS
GGTCTCAGCTAAGAAGTTTG+GGG 0.642019 3.1:+72373595 MS.gene02651:intron
AGGTGAAGAGTATCTTGAGA+CGG 0.642729 3.1:-72371023 None:intergenic
ATCAGGATTGTGGAGAGCGT+AGG 0.642832 3.1:+72372565 MS.gene02651:intron
TCTTAGGATCAACACTGACA+GGG 0.645688 3.1:+72372696 MS.gene02651:CDS
ATTGTGGAGAGCGTAGGCGA+GGG 0.662603 3.1:+72372571 MS.gene02651:CDS
AAGATAGCAACAGATGAACC+GGG 0.667433 3.1:-72373301 None:intergenic
ATTGCTGAAATGACAAATGG+AGG 0.669847 3.1:+72373786 MS.gene02651:CDS
CTCCCCTGTGAATACAGGCA+GGG 0.674123 3.1:-72372623 None:intergenic
CTTAGGATCAACACTGACAG+GGG 0.684115 3.1:+72372697 MS.gene02651:CDS
TCCACTTCCTCCATCACCAG+CGG 0.690568 3.1:-72370973 None:intergenic
CAACATTAGGAAGATCAGTG+CGG 0.707517 3.1:-72374087 None:intergenic
TGAAATGACAAATGGAGGTG+TGG 0.709912 3.1:+72373791 MS.gene02651:CDS
ACATTAGGAAGATCAGTGCG+GGG 0.718262 3.1:-72374085 None:intergenic
TGTGACACATCTAAAACCAG+GGG 0.732525 3.1:+72372594 MS.gene02651:CDS
TGCCCTGCCTGTATTCACAG+GGG 0.737931 3.1:+72372621 MS.gene02651:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAACAATCAAAATTTA+CGG + chr3.1:72370117-72370136 MS.gene02651:intron 10.0%
!!! CATTTTATAACTTTAATTTT+TGG - chr3.1:72370604-72370623 None:intergenic 10.0%
!!! TAAACATAGTAATTAATTTT+TGG - chr3.1:72370635-72370654 None:intergenic 10.0%
!!! TAAATTTTGATTGTTTTTAT+TGG - chr3.1:72370117-72370136 None:intergenic 10.0%
!!! TATTTTACTTTATTTTTTAC+GGG - chr3.1:72371734-72371753 None:intergenic 10.0%
!!! TTTAATTCATAAGATTTTAA+AGG - chr3.1:72371878-72371897 None:intergenic 10.0%
!! AAAATTAAGTCATATAACTT+AGG - chr3.1:72373563-72373582 None:intergenic 15.0%
!! TAAAAACAATCAAAATTTAC+GGG + chr3.1:72370118-72370137 MS.gene02651:intron 15.0%
!! TAAACTTTGTTAATTGAATA+TGG + chr3.1:72373707-72373726 MS.gene02651:intron 15.0%
!! TGAGATATTAATATATAACT+AGG + chr3.1:72373199-72373218 MS.gene02651:intron 15.0%
!!! AATAAGTTTAAAACAACTTA+TGG - chr3.1:72372995-72373014 None:intergenic 15.0%
!!! AATTAATTCTTGTTTTTTGA+GGG + chr3.1:72372239-72372258 MS.gene02651:intron 15.0%
!!! ACATTTTACAACTTAATTTT+TGG - chr3.1:72370574-72370593 None:intergenic 15.0%
!!! ATAATCGTTTTTAAATCAAA+TGG - chr3.1:72369893-72369912 None:intergenic 15.0%
!!! ATGAATTTTATTCATAATGT+TGG + chr3.1:72372532-72372551 MS.gene02651:intron 15.0%
!!! ATGATTTTAAAAGACTTTTA+AGG - chr3.1:72371912-72371931 None:intergenic 15.0%
!!! CTTAATTTTTGAAATATTCT+TGG + chr3.1:72373574-72373593 MS.gene02651:intron 15.0%
!!! TAATTAATTCTTGTTTTTTG+AGG + chr3.1:72372238-72372257 MS.gene02651:intron 15.0%
!!! TTTAATAAATCAGATTTTGA+TGG + chr3.1:72371453-72371472 MS.gene02651:intron 15.0%
!! AAAAACAATCAAAATTTACG+GGG + chr3.1:72370119-72370138 MS.gene02651:intron 20.0%
!! AATACATGTAATTATTGCAT+TGG + chr3.1:72370300-72370319 MS.gene02651:intron 20.0%
!! ATTTGATTGTATATGAAAAG+GGG + chr3.1:72371156-72371175 MS.gene02651:intron 20.0%
!! CTCAATCTTAAATCATTTAA+TGG - chr3.1:72373535-72373554 None:intergenic 20.0%
!! GATTCAATAATACAAATTTC+AGG + chr3.1:72373415-72373434 MS.gene02651:intron 20.0%
!! GATTTGATTGTATATGAAAA+GGG + chr3.1:72371155-72371174 MS.gene02651:intron 20.0%
!! TATATTAATATCTCAATGCA+AGG - chr3.1:72373194-72373213 None:intergenic 20.0%
!! TGATTTGATTGTATATGAAA+AGG + chr3.1:72371154-72371173 MS.gene02651:intron 20.0%
!! TTTCATTCAACAAATTCATA+GGG - chr3.1:72374030-72374049 None:intergenic 20.0%
!!! AAATTGTGTTTTGCTTTTTA+TGG + chr3.1:72370831-72370850 MS.gene02651:intron 20.0%
!!! ACACAAGACTTTTTTTAAAT+TGG - chr3.1:72371318-72371337 None:intergenic 20.0%
!!! ACTTCATTTTTCTTACTATA+TGG + chr3.1:72372455-72372474 MS.gene02651:intron 20.0%
!!! ATTAATTCTTGTTTTTTGAG+GGG + chr3.1:72372240-72372259 MS.gene02651:intron 20.0%
!!! ATTAGTTGAATTGACTTTAA+TGG + chr3.1:72369923-72369942 MS.gene02651:intron 20.0%
!!! ATTCTTCTGAGTTTAATTTT+AGG + chr3.1:72371207-72371226 MS.gene02651:intron 20.0%
!!! CATTAAATGATTTAAGATTG+AGG + chr3.1:72373533-72373552 MS.gene02651:intron 20.0%
!!! CTTATTTTTATAATCTCTCT+AGG + chr3.1:72373009-72373028 MS.gene02651:intron 20.0%
!!! TTCTTCTGAGTTTAATTTTA+GGG + chr3.1:72371208-72371227 MS.gene02651:intron 20.0%
!!! TTTCTTTTTTTTTGAACAAG+TGG + chr3.1:72370533-72370552 MS.gene02651:intron 20.0%
!!! TTTTGTTTAAAAATGTCTTG+AGG - chr3.1:72371970-72371989 None:intergenic 20.0%
!!! TTTTTCACTACTATAAATGA+AGG + chr3.1:72370669-72370688 MS.gene02651:intron 20.0%
! AATTTCCTTTAATCTAAGGA+GGG - chr3.1:72372022-72372041 None:intergenic 25.0%
! ACAAGACCCAAAATTTATAA+AGG + chr3.1:72370401-72370420 MS.gene02651:intron 25.0%
! ACTATGTTTAGAAAATCACT+CGG + chr3.1:72370645-72370664 MS.gene02651:intron 25.0%
! AGGATATATTATACACTACT+TGG - chr3.1:72373174-72373193 None:intergenic 25.0%
! ATCACTTAAAAAAAGTCTAG+TGG + chr3.1:72371399-72371418 MS.gene02651:intron 25.0%
! ATGAAAACATGAGATTTCTT+AGG + chr3.1:72371522-72371541 MS.gene02651:intron 25.0%
! CAAAATCATTCAAATTTCGA+AGG + chr3.1:72371426-72371445 MS.gene02651:intron 25.0%
! CAATAAATCAATCATATCTG+TGG - chr3.1:72372369-72372388 None:intergenic 25.0%
! CCAAAATTTATAAAGGAAGA+GGG + chr3.1:72370408-72370427 MS.gene02651:intron 25.0%
! CGTAAGTACTTAAATGATAA+GGG + chr3.1:72373112-72373131 MS.gene02651:intron 25.0%
! CTTTCATTCAACAAATTCAT+AGG - chr3.1:72374031-72374050 None:intergenic 25.0%
! GCTTAATTTCCTTTAATCTA+AGG - chr3.1:72372026-72372045 None:intergenic 25.0%
! GTCATTTAAAAAAAGTCTTG+TGG + chr3.1:72371357-72371376 MS.gene02651:intron 25.0%
! TAATTTCCTTTAATCTAAGG+AGG - chr3.1:72372023-72372042 None:intergenic 25.0%
! TAGATTAAAGGAAATTAAGC+TGG + chr3.1:72372026-72372045 MS.gene02651:intron 25.0%
! TATAAAAGTAACATACAGCA+AGG - chr3.1:72373345-72373364 None:intergenic 25.0%
! TATGAATTGAATCCTTTACA+AGG - chr3.1:72372268-72372287 None:intergenic 25.0%
! TTTATCATGAAAAAGTCTTG+TGG + chr3.1:72371273-72371292 MS.gene02651:intron 25.0%
! TTTGATTGTATATGAAAAGG+GGG + chr3.1:72371157-72371176 MS.gene02651:intron 25.0%
! TTTGTAACAAAGAGAAAAAG+AGG - chr3.1:72370801-72370820 None:intergenic 25.0%
!! AAGGATTTGAAATGACTTTA+TGG - chr3.1:72371859-72371878 None:intergenic 25.0%
!! AATTTGGAGTAGTATACAAT+TGG + chr3.1:72370175-72370194 MS.gene02651:intron 25.0%
!! AGAATATTCTAGAAACGAAA+AGG + chr3.1:72370435-72370454 MS.gene02651:intron 25.0%
!! CCTCTTCCTTTATAAATTTT+GGG - chr3.1:72370410-72370429 None:intergenic 25.0%
!! TATTTGGAGTAGTATACAAT+TGG + chr3.1:72370078-72370097 MS.gene02651:intron 25.0%
!!! ATTGGAGTCTTTTTTAATCT+GGG + chr3.1:72372051-72372070 MS.gene02651:intron 25.0%
!!! CTATGAATTTGTTGAATGAA+AGG + chr3.1:72374029-72374048 MS.gene02651:CDS 25.0%
!!! TCTTCTGAGTTTAATTTTAG+GGG + chr3.1:72371209-72371228 MS.gene02651:intron 25.0%
!!! TTTGCTTTTTATGGATCTAA+GGG + chr3.1:72370840-72370859 MS.gene02651:intron 25.0%
!!! TTTTGCTTTTTATGGATCTA+AGG + chr3.1:72370839-72370858 MS.gene02651:intron 25.0%
ACCCTAAGAAAAACAAATCA+AGG - chr3.1:72373951-72373970 None:intergenic 30.0%
AGAAAACAATAAATGTTGCC+TGG + chr3.1:72369999-72370018 MS.gene02651:intron 30.0%
AGAAAGAAACACAATCCAAA+TGG - chr3.1:72370867-72370886 None:intergenic 30.0%
AGAAGTTATAAAGCTTACTG+AGG + chr3.1:72373919-72373938 MS.gene02651:intron 30.0%
AGAATACAAACTTTGTCAAG+TGG - chr3.1:72372856-72372875 None:intergenic 30.0%
AGCTGCAGATATAAAATGAT+CGG - chr3.1:72370929-72370948 None:intergenic 30.0%
AGTAAACATCAGTATGACAA+AGG - chr3.1:72371050-72371069 None:intergenic 30.0%
ATGCAAAAGTGACACATATT+TGG + chr3.1:72370062-72370081 MS.gene02651:intron 30.0%
ATGTACTTCTCTACAACATT+AGG - chr3.1:72374103-72374122 None:intergenic 30.0%
CAGTCAAGATTCTCTATTAA+GGG + chr3.1:72372739-72372758 MS.gene02651:CDS 30.0%
CCATGAATGCAAATTGAATT+AGG - chr3.1:72373240-72373259 None:intergenic 30.0%
CCCAAAATTTATAAAGGAAG+AGG + chr3.1:72370407-72370426 MS.gene02651:intron 30.0%
CCTAATTCAATTTGCATTCA+TGG + chr3.1:72373237-72373256 MS.gene02651:intron 30.0%
GCATTGTACCTAATTCAAAT+CGG - chr3.1:72373502-72373521 None:intergenic 30.0%
GCGTAAGTACTTAAATGATA+AGG + chr3.1:72373111-72373130 MS.gene02651:intron 30.0%
GGGTTTGTAATTACCATAAA+AGG - chr3.1:72374068-72374087 None:intergenic 30.0%
GTAAACATCAGTATGACAAA+GGG - chr3.1:72371049-72371068 None:intergenic 30.0%
GTAATTGCTGAAATGACAAA+TGG + chr3.1:72373783-72373802 MS.gene02651:CDS 30.0%
GTATTGGATCATGATTCTAA+GGG + chr3.1:72371235-72371254 MS.gene02651:intron 30.0%
TATTCTTTCCTTCTGTTTCA+GGG + chr3.1:72372120-72372139 MS.gene02651:intron 30.0%
TCAGTCAAGATTCTCTATTA+AGG + chr3.1:72372738-72372757 MS.gene02651:CDS 30.0%
TCATACTGATGTTTACTTCT+GGG + chr3.1:72371053-72371072 MS.gene02651:CDS 30.0%
TGTATTGGATCATGATTCTA+AGG + chr3.1:72371234-72371253 MS.gene02651:intron 30.0%
TTATTCTTTCCTTCTGTTTC+AGG + chr3.1:72372119-72372138 MS.gene02651:intron 30.0%
TTGAATGAAAGGACTCTTAA+GGG + chr3.1:72374040-72374059 MS.gene02651:CDS 30.0%
TTGAATGCATCATCTTTGTT+TGG - chr3.1:72374001-72374020 None:intergenic 30.0%
! CCCTCTTCCTTTATAAATTT+TGG - chr3.1:72370411-72370430 None:intergenic 30.0%
! GCTTTGTTAATCTCTGAAAA+TGG - chr3.1:72374280-72374299 None:intergenic 30.0%
! GTATTGGATTAGGATTTCAA+AGG - chr3.1:72371998-72372017 None:intergenic 30.0%
! TTGTAGAGAAGTACATGAAA+GGG + chr3.1:72374107-72374126 MS.gene02651:CDS 30.0%
!! AGGATTTTAAAAGACTTTGC+AGG - chr3.1:72371950-72371969 None:intergenic 30.0%
!! ATTTGTTTTTCTTAGGGTTG+GGG + chr3.1:72373953-72373972 MS.gene02651:intron 30.0%
!! CTTCTGAGTTTAATTTTAGG+GGG + chr3.1:72371210-72371229 MS.gene02651:intron 30.0%
!! GATTTGTTTTTCTTAGGGTT+GGG + chr3.1:72373952-72373971 MS.gene02651:intron 30.0%
!! TGTTGATAATTTGATACTGC+AGG + chr3.1:72374219-72374238 MS.gene02651:intron 30.0%
!! TTCTGAGTTTAATTTTAGGG+GGG + chr3.1:72371211-72371230 MS.gene02651:intron 30.0%
!!! AGCCTTGATTTGTTTTTCTT+AGG + chr3.1:72373946-72373965 MS.gene02651:intron 30.0%
!!! ATTTTGTTTTGCATACATCG+TGG - chr3.1:72373875-72373894 None:intergenic 30.0%
!!! CAGATTTTGATGGATTTTGT+GGG + chr3.1:72371463-72371482 MS.gene02651:intron 30.0%
!!! GATTGGAGTCTTTTTTAATC+TGG + chr3.1:72372050-72372069 MS.gene02651:intron 30.0%
!!! GCCTTGATTTGTTTTTCTTA+GGG + chr3.1:72373947-72373966 MS.gene02651:intron 30.0%
!!! TCAGATTTTGATGGATTTTG+TGG + chr3.1:72371462-72371481 MS.gene02651:intron 30.0%
!!! TGATTTGTTTTTCTTAGGGT+TGG + chr3.1:72373951-72373970 MS.gene02651:intron 30.0%
AAAGATAGCAACAGATGAAC+CGG - chr3.1:72373305-72373324 None:intergenic 35.0%
AAAGTTTGTATTCTCAGCTG+TGG + chr3.1:72372862-72372881 MS.gene02651:CDS 35.0%
AAGGAAATTAAGCTGGTGAT+TGG + chr3.1:72372033-72372052 MS.gene02651:intron 35.0%
ACAAAGAGAAAAAGAGGACA+TGG - chr3.1:72370795-72370814 None:intergenic 35.0%
ATACACCCTCCTTAGATTAA+AGG + chr3.1:72372014-72372033 MS.gene02651:intron 35.0%
ATTGCTGAAATGACAAATGG+AGG + chr3.1:72373786-72373805 MS.gene02651:CDS 35.0%
CAATTTGCATTCATGGTTGT+AGG + chr3.1:72373244-72373263 MS.gene02651:intron 35.0%
CCAAAAATACGAGGAAACAA+TGG - chr3.1:72372153-72372172 None:intergenic 35.0%
GAATATACTGTTGTTCATGC+TGG + chr3.1:72372802-72372821 MS.gene02651:CDS 35.0%
GGTATGATCACTGGATTTAT+TGG + chr3.1:72369784-72369803 MS.gene02651:intron 35.0%
GTCATACTGATGTTTACTTC+TGG + chr3.1:72371052-72371071 MS.gene02651:CDS 35.0%
GTTGAATGAAAGGACTCTTA+AGG + chr3.1:72374039-72374058 MS.gene02651:CDS 35.0%
TGTTGAACTAACCTGTTGTA+CGG - chr3.1:72373657-72373676 None:intergenic 35.0%
TTAACTATGTCGAACACTGT+TGG + chr3.1:72370746-72370765 MS.gene02651:intron 35.0%
! AAATGCAAAGGTATGATCAC+TGG + chr3.1:72369775-72369794 MS.gene02651:intron 35.0%
! ATGATTATGAGTGAGTTGAG+TGG - chr3.1:72370716-72370735 None:intergenic 35.0%
! CCATTGTTTCCTCGTATTTT+TGG + chr3.1:72372150-72372169 MS.gene02651:CDS 35.0%
! GTTGTAGAGAAGTACATGAA+AGG + chr3.1:72374106-72374125 MS.gene02651:CDS 35.0%
! TCATTTTATATCTGCAGCTG+CGG + chr3.1:72370930-72370949 MS.gene02651:intron 35.0%
! TGATTATGAGTGAGTTGAGT+GGG - chr3.1:72370715-72370734 None:intergenic 35.0%
! TGTAGAGAAGTACATGAAAG+GGG + chr3.1:72374108-72374127 MS.gene02651:CDS 35.0%
! TTAATCTAAGGAGGGTGTAT+TGG - chr3.1:72372014-72372033 None:intergenic 35.0%
!! GCTGTCACTTTAAAATAACC+AGG - chr3.1:72370020-72370039 None:intergenic 35.0%
!! GCTTTTGATTACATGCTGAA+AGG + chr3.1:72374298-72374317 MS.gene02651:CDS 35.0%
!! GTTTCTAGCCGATTTGAATT+AGG + chr3.1:72373491-72373510 MS.gene02651:CDS 35.0%
!! TTAATTTTAGGGGGGTGTAT+TGG + chr3.1:72371219-72371238 MS.gene02651:intron 35.0%
!!! ACTCTTAAGGGTACCTTTTA+TGG + chr3.1:72374052-72374071 MS.gene02651:CDS 35.0%
AACACAAACACACACACTCA+TGG - chr3.1:72373368-72373387 None:intergenic 40.0%
AACATCAGTATGACAAAGGG+AGG - chr3.1:72371046-72371065 None:intergenic 40.0%
AACATTAGGAAGATCAGTGC+GGG - chr3.1:72374089-72374108 None:intergenic 40.0%
AAGATAGCAACAGATGAACC+GGG - chr3.1:72373304-72373323 None:intergenic 40.0%
AAGCCACAAATTATACCACC+TGG - chr3.1:72370465-72370484 None:intergenic 40.0%
ACATTCGAAAGCTGAGATCA+TGG - chr3.1:72373850-72373869 None:intergenic 40.0%
AGAGAGATGGAGAGATAGAA+GGG - chr3.1:72371598-72371617 None:intergenic 40.0%
ATGGCACACTTAATCTGAGA+CGG - chr3.1:72369874-72369893 None:intergenic 40.0%
ATGTTGGCATGATGTTGATC+AGG + chr3.1:72372548-72372567 MS.gene02651:intron 40.0%
CAACATTAGGAAGATCAGTG+CGG - chr3.1:72374090-72374109 None:intergenic 40.0%
CATGATGTTGATCAGGATTG+TGG + chr3.1:72372555-72372574 MS.gene02651:intron 40.0%
GAACCAGGTGGTATAATTTG+TGG + chr3.1:72370459-72370478 MS.gene02651:intron 40.0%
GCAACATGTGTGATCTTCTT+AGG + chr3.1:72372680-72372699 MS.gene02651:CDS 40.0%
GCTTCATGACCAAAAATACG+AGG - chr3.1:72372162-72372181 None:intergenic 40.0%
GGTCAAGTCATCAAATGCAA+AGG + chr3.1:72369763-72369782 MS.gene02651:CDS 40.0%
GGTTCATCTGTTGCTATCTT+TGG + chr3.1:72373304-72373323 MS.gene02651:CDS 40.0%
GTGGTAAAGTCAAATCCCAA+AGG + chr3.1:72370486-72370505 MS.gene02651:intron 40.0%
GTTGAACTAACCTGTTGTAC+GGG - chr3.1:72373656-72373675 None:intergenic 40.0%
TAATTTGATACTGCAGGAGC+TGG + chr3.1:72374225-72374244 MS.gene02651:intron 40.0%
TACAAATTTCAGGCTGCTGA+AGG + chr3.1:72373425-72373444 MS.gene02651:intron 40.0%
TAGAAACGAAAAGGAGAACC+AGG + chr3.1:72370444-72370463 MS.gene02651:intron 40.0%
TATGGATCTAAGGGTCCATT+TGG + chr3.1:72370849-72370868 MS.gene02651:intron 40.0%
TCTGGTGCATCAAGAATCAT+TGG + chr3.1:72373458-72373477 MS.gene02651:CDS 40.0%
TCTGTTGCTATCTTTGGACT+TGG + chr3.1:72373310-72373329 MS.gene02651:CDS 40.0%
TCTTAGGATCAACACTGACA+GGG + chr3.1:72372696-72372715 MS.gene02651:CDS 40.0%
TGAAATGACAAATGGAGGTG+TGG + chr3.1:72373791-72373810 MS.gene02651:CDS 40.0%
TGGTCTCAGCTAAGAAGTTT+GGG + chr3.1:72373594-72373613 MS.gene02651:intron 40.0%
TTCTTAGGATCAACACTGAC+AGG + chr3.1:72372695-72372714 MS.gene02651:CDS 40.0%
TTGGTCTCAGCTAAGAAGTT+TGG + chr3.1:72373593-72373612 MS.gene02651:intron 40.0%
TTTCGGCTTAGCAACATTGA+TGG - chr3.1:72373281-72373300 None:intergenic 40.0%
! ACGGGTTTGTCATGATCTTT+TGG - chr3.1:72373638-72373657 None:intergenic 40.0%
! AGGTGGTATAATTTGTGGCT+TGG + chr3.1:72370464-72370483 MS.gene02651:intron 40.0%
! ATCGTGCTGTTGAATGTACT+GGG + chr3.1:72373814-72373833 MS.gene02651:CDS 40.0%
! CGGGTTTGTCATGATCTTTT+GGG - chr3.1:72373637-72373656 None:intergenic 40.0%
! GATTATGAGTGAGTTGAGTG+GGG - chr3.1:72370714-72370733 None:intergenic 40.0%
! GTGTGACACATCTAAAACCA+GGG + chr3.1:72372593-72372612 MS.gene02651:CDS 40.0%
! TAAGGAGGGTGTATTGGATT+AGG - chr3.1:72372008-72372027 None:intergenic 40.0%
! TGGTATAATTTGTGGCTTGG+TGG + chr3.1:72370467-72370486 MS.gene02651:intron 40.0%
! TGTGACACATCTAAAACCAG+GGG + chr3.1:72372594-72372613 MS.gene02651:CDS 40.0%
! TGTTTACTTCTGGGAAGCTA+AGG + chr3.1:72371062-72371081 MS.gene02651:CDS 40.0%
!! AGGTGAAGAGTATCTTGAGA+CGG - chr3.1:72371026-72371045 None:intergenic 40.0%
!! AGTATGCTTAAAGAGTGTCC+CGG + chr3.1:72370366-72370385 MS.gene02651:intron 40.0%
!! TCCAAATTTAAAGAGTGCCC+CGG - chr3.1:72370163-72370182 None:intergenic 40.0%
!! TTTTGAGGGGTTCCTTGTAA+AGG + chr3.1:72372253-72372272 MS.gene02651:intron 40.0%
!! TTTTTGGTCATGAAGCTGGA+GGG + chr3.1:72372166-72372185 MS.gene02651:CDS 40.0%
!!! ATTTTTGGTCATGAAGCTGG+AGG + chr3.1:72372165-72372184 MS.gene02651:CDS 40.0%
!!! CGTATTTTTGGTCATGAAGC+TGG + chr3.1:72372162-72372181 MS.gene02651:CDS 40.0%
AAACGAAAAGGAGAACCAGG+TGG + chr3.1:72370447-72370466 MS.gene02651:intron 45.0%
AAATGTTAACGAGTGTCCCC+GGG + chr3.1:72370142-72370161 MS.gene02651:intron 45.0%
AATGTTGCTAAGCCGAAACC+CGG + chr3.1:72373283-72373302 MS.gene02651:CDS 45.0%
ACATTAGGAAGATCAGTGCG+GGG - chr3.1:72374088-72374107 None:intergenic 45.0%
ACTTTGTCAAGTGGTGCATC+AGG - chr3.1:72372847-72372866 None:intergenic 45.0%
ATCTTTGGACTTGGAGCTGT+TGG + chr3.1:72373319-72373338 MS.gene02651:CDS 45.0%
CAGCCCATTCATCATTTCGT+CGG + chr3.1:72372763-72372782 MS.gene02651:CDS 45.0%
CATCAGATGCATCATCCGAA+TGG + chr3.1:72374327-72374346 MS.gene02651:CDS 45.0%
CATTCGGATGATGCATCTGA+TGG - chr3.1:72374329-72374348 None:intergenic 45.0%
CTCTCCTCTGACTTACAATG+TGG - chr3.1:72372661-72372680 None:intergenic 45.0%
CTGTCCACATTGTAAGTCAG+AGG + chr3.1:72372654-72372673 MS.gene02651:CDS 45.0%
CTTAGGATCAACACTGACAG+GGG + chr3.1:72372697-72372716 MS.gene02651:CDS 45.0%
CTTTGTCAAGTGGTGCATCA+GGG - chr3.1:72372846-72372865 None:intergenic 45.0%
GAAATGTTAACGAGTGTCCC+CGG + chr3.1:72370141-72370160 MS.gene02651:intron 45.0%
GAATATGCACAGGTATGAGC+TGG + chr3.1:72372884-72372903 MS.gene02651:intron 45.0%
GAGAGAGATGGAGAGATAGA+AGG - chr3.1:72371599-72371618 None:intergenic 45.0%
GAGAGAGTAAGAGAGAGAGA+TGG - chr3.1:72371611-72371630 None:intergenic 45.0%
GAGTTTGACCCTGAAACAGA+AGG - chr3.1:72372131-72372150 None:intergenic 45.0%
GCATTCATGGTTGTAGGTCT+TGG + chr3.1:72373250-72373269 MS.gene02651:intron 45.0%
GGTCTCAGCTAAGAAGTTTG+GGG + chr3.1:72373595-72373614 MS.gene02651:intron 45.0%
TATGTCGAACACTGTTGGTC+AGG + chr3.1:72370751-72370770 MS.gene02651:intron 45.0%
TCATGACAAACCCGTACAAC+AGG + chr3.1:72373643-72373662 MS.gene02651:CDS 45.0%
TCTTGTTAACGAGTGTCTCC+GGG - chr3.1:72370387-72370406 None:intergenic 45.0%
TGAAGGTCACTGACAGTAGT+TGG + chr3.1:72370686-72370705 MS.gene02651:intron 45.0%
! ATTTTACCAGCTGCGCCTTT+GGG - chr3.1:72370504-72370523 None:intergenic 45.0%
! GATCGTGCTGTTGAATGTAC+TGG + chr3.1:72373813-72373832 MS.gene02651:CDS 45.0%
! GGTGTGACACATCTAAAACC+AGG + chr3.1:72372592-72372611 MS.gene02651:CDS 45.0%
! GTCTTGTTAACGAGTGTCTC+CGG - chr3.1:72370388-72370407 None:intergenic 45.0%
! GTGCCGACGAAATGATGAAT+GGG - chr3.1:72372769-72372788 None:intergenic 45.0%
! TATCTTGAGACGGACTTCAC+CGG - chr3.1:72371016-72371035 None:intergenic 45.0%
! TGTGCCGACGAAATGATGAA+TGG - chr3.1:72372770-72372789 None:intergenic 45.0%
!! ATGTTCCTTAAAGAGTGCCC+CGG - chr3.1:72370260-72370279 None:intergenic 45.0%
!! CAAATTTAAAGAGTGCCCCG+GGG - chr3.1:72370161-72370180 None:intergenic 45.0%
!! CCAAATTTAAAGAGTGCCCC+GGG - chr3.1:72370162-72370181 None:intergenic 45.0%
!!! GCTGTGTCATTTTGTGTGCA+AGG + chr3.1:72373761-72373780 MS.gene02651:intron 45.0%
!!! TTATTTTACTTTATTTTTTA+CGG - chr3.1:72371735-72371754 None:intergenic 5.0%
!!! TTTATTTTTATATTTCATTA+TGG + chr3.1:72373077-72373096 MS.gene02651:intron 5.0%
AATGTTAACGAGTGTCCCCG+GGG + chr3.1:72370143-72370162 MS.gene02651:intron 50.0%
AGAGAGAGACAGAGAGAGAG+GGG - chr3.1:72371643-72371662 None:intergenic 50.0%
AGAGAGAGAGACAGAGAGAG+AGG - chr3.1:72371645-72371664 None:intergenic 50.0%
ATGCCCTGCCTGTATTCACA+GGG + chr3.1:72372620-72372639 MS.gene02651:CDS 50.0%
CAGATGCATCATCCGAATGG+AGG + chr3.1:72374330-72374349 MS.gene02651:CDS 50.0%
CTCAGCTGTGGAATATGCAC+AGG + chr3.1:72372874-72372893 MS.gene02651:CDS 50.0%
GAGAGAGAGACAGAGAGAGA+GGG - chr3.1:72371644-72371663 None:intergenic 50.0%
GAGAGAGAGAGAGAGAAGGA+AGG - chr3.1:72371686-72371705 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+AGG - chr3.1:72371690-72371709 None:intergenic 50.0%
GAGATGGAGAGATAGAAGGG+AGG - chr3.1:72371595-72371614 None:intergenic 50.0%
GCAACAGATGAACCGGGTTT+CGG - chr3.1:72373298-72373317 None:intergenic 50.0%
GCTGAAGGAGCAAGGATATC+TGG + chr3.1:72373440-72373459 MS.gene02651:CDS 50.0%
TGCACAGGTATGAGCTGGTT+TGG + chr3.1:72372889-72372908 MS.gene02651:intron 50.0%
! ATCAGGATTGTGGAGAGCGT+AGG + chr3.1:72372565-72372584 MS.gene02651:intron 50.0%
! CAAAGGCGCAGCTGGTAAAA+TGG + chr3.1:72370503-72370522 MS.gene02651:intron 50.0%
! CATTTTACCAGCTGCGCCTT+TGG - chr3.1:72370505-72370524 None:intergenic 50.0%
! CCCGGGGCACTCTTTAAATT+TGG + chr3.1:72370159-72370178 MS.gene02651:intron 50.0%
! CTGTATTCACAGGGGAGTGT+GGG + chr3.1:72372629-72372648 MS.gene02651:CDS 50.0%
! GCACAGGTATGAGCTGGTTT+GGG + chr3.1:72372890-72372909 MS.gene02651:intron 50.0%
! TGTATTCACAGGGGAGTGTG+GGG + chr3.1:72372630-72372649 MS.gene02651:CDS 50.0%
!! TGAATGTACTGGGAGCATCC+AGG + chr3.1:72373824-72373843 MS.gene02651:CDS 50.0%
!! TGGGGTGTTGCTGTACTTGT+TGG + chr3.1:72373971-72373990 MS.gene02651:CDS 50.0%
!! TGTTCCTTAAAGAGTGCCCC+GGG - chr3.1:72370259-72370278 None:intergenic 50.0%
ACTCCCCTGTGAATACAGGC+AGG - chr3.1:72372627-72372646 None:intergenic 55.0%
AGAAGGGAGGAGAGAGAGAG+AGG - chr3.1:72371582-72371601 None:intergenic 55.0%
AGAGAAGGAAGGCGAGAGAG+AGG - chr3.1:72371675-72371694 None:intergenic 55.0%
AGAGAGACAGAGAGAGAGGG+GGG - chr3.1:72371641-72371660 None:intergenic 55.0%
ATCTGCAGCTGCGGTTGCAT+GGG + chr3.1:72370939-72370958 MS.gene02651:intron 55.0%
CATGCCCTGCCTGTATTCAC+AGG + chr3.1:72372619-72372638 MS.gene02651:CDS 55.0%
CCACACTCCCCTGTGAATAC+AGG - chr3.1:72372631-72372650 None:intergenic 55.0%
CCTGTATTCACAGGGGAGTG+TGG + chr3.1:72372628-72372647 MS.gene02651:CDS 55.0%
CGAAAGCTGAGATCATGGCC+TGG - chr3.1:72373845-72373864 None:intergenic 55.0%
CTCCCCTGTGAATACAGGCA+GGG - chr3.1:72372626-72372645 None:intergenic 55.0%
GAAGGGAGGAGAGAGAGAGA+GGG - chr3.1:72371581-72371600 None:intergenic 55.0%
GAGAGAGACAGAGAGAGAGG+GGG - chr3.1:72371642-72371661 None:intergenic 55.0%
GGTCAGGTCATCAAGTGCAG+AGG + chr3.1:72370767-72370786 MS.gene02651:intron 55.0%
TATCTGCAGCTGCGGTTGCA+TGG + chr3.1:72370938-72370957 MS.gene02651:intron 55.0%
TCCACTTCCTCCATCACCAG+CGG - chr3.1:72370976-72370995 None:intergenic 55.0%
TGCCCTGCCTGTATTCACAG+GGG + chr3.1:72372621-72372640 MS.gene02651:CDS 55.0%
TTCAGGCTGCTGAAGGAGCA+AGG + chr3.1:72373432-72373451 MS.gene02651:intron 55.0%
! ATTGTGGAGAGCGTAGGCGA+GGG + chr3.1:72372571-72372590 MS.gene02651:CDS 55.0%
! TCAAATCCCAAAGGCGCAGC+TGG + chr3.1:72370495-72370514 MS.gene02651:intron 55.0%
!! GTTCCTTAAAGAGTGCCCCG+GGG - chr3.1:72370258-72370277 None:intergenic 55.0%
! GATTGTGGAGAGCGTAGGCG+AGG + chr3.1:72372570-72372589 MS.gene02651:CDS 60.0%
! TGTCCCCGGGGCACTCTTTA+AGG + chr3.1:72370155-72370174 MS.gene02651:intron 60.0%
!! AGACGGACTTCACCGGCTTG+TGG - chr3.1:72371009-72371028 None:intergenic 60.0%
!! GCTGGTGATGGAGGAAGTGG+AGG + chr3.1:72370975-72370994 MS.gene02651:CDS 60.0%
!! GGTGATGGAGGAAGTGGAGG+TGG + chr3.1:72370978-72370997 MS.gene02651:CDS 60.0%
ACAGGCAGGGCATGATCCCC+TGG - chr3.1:72372613-72372632 None:intergenic 65.0%
AGCTGCGGTTGCATGGGAGG+CGG + chr3.1:72370945-72370964 MS.gene02651:intron 65.0%
GAGACAGAGAGAGAGGGGGG+AGG - chr3.1:72371638-72371657 None:intergenic 65.0%
TGCAGCTGCGGTTGCATGGG+AGG + chr3.1:72370942-72370961 MS.gene02651:intron 65.0%
!! CGGACTTCACCGGCTTGTGG+TGG - chr3.1:72371006-72371025 None:intergenic 65.0%
!! GCCGCTGGTGATGGAGGAAG+TGG + chr3.1:72370972-72370991 MS.gene02651:CDS 65.0%
CTGCGGTTGCATGGGAGGCG+GGG + chr3.1:72370947-72370966 MS.gene02651:CDS 70.0%
GAGGTGGCGCCACCACAAGC+CGG + chr3.1:72370994-72371013 MS.gene02651:CDS 70.0%
GCTGCGGTTGCATGGGAGGC+GGG + chr3.1:72370946-72370965 MS.gene02651:intron 70.0%
!! GGGGAAGCCGCTGGTGATGG+AGG + chr3.1:72370966-72370985 MS.gene02651:CDS 70.0%
ATGGGAGGCGGGGAAGCCGC+TGG + chr3.1:72370957-72370976 MS.gene02651:CDS 75.0%
GGCGGGGAAGCCGCTGGTGA+TGG + chr3.1:72370963-72370982 MS.gene02651:CDS 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 72369748 72374357 72369748 ID=MS.gene02651
chr3.1 mRNA 72369748 72374357 72369748 ID=MS.gene02651.t1;Parent=MS.gene02651
chr3.1 exon 72369748 72369784 72369748 ID=MS.gene02651.t1.exon1;Parent=MS.gene02651.t1
chr3.1 CDS 72369748 72369784 72369748 ID=cds.MS.gene02651.t1;Parent=MS.gene02651.t1
chr3.1 exon 72370947 72371083 72370947 ID=MS.gene02651.t1.exon2;Parent=MS.gene02651.t1
chr3.1 CDS 72370947 72371083 72370947 ID=cds.MS.gene02651.t1;Parent=MS.gene02651.t1
chr3.1 exon 72372141 72372187 72372141 ID=MS.gene02651.t1.exon3;Parent=MS.gene02651.t1
chr3.1 CDS 72372141 72372187 72372141 ID=cds.MS.gene02651.t1;Parent=MS.gene02651.t1
chr3.1 exon 72372570 72372895 72372570 ID=MS.gene02651.t1.exon4;Parent=MS.gene02651.t1
chr3.1 CDS 72372570 72372895 72372570 ID=cds.MS.gene02651.t1;Parent=MS.gene02651.t1
chr3.1 exon 72373266 72373348 72373266 ID=MS.gene02651.t1.exon5;Parent=MS.gene02651.t1
chr3.1 CDS 72373266 72373348 72373266 ID=cds.MS.gene02651.t1;Parent=MS.gene02651.t1
chr3.1 exon 72373437 72373512 72373437 ID=MS.gene02651.t1.exon6;Parent=MS.gene02651.t1
chr3.1 CDS 72373437 72373512 72373437 ID=cds.MS.gene02651.t1;Parent=MS.gene02651.t1
chr3.1 exon 72373603 72373664 72373603 ID=MS.gene02651.t1.exon7;Parent=MS.gene02651.t1
chr3.1 CDS 72373603 72373664 72373603 ID=cds.MS.gene02651.t1;Parent=MS.gene02651.t1
chr3.1 exon 72373783 72373878 72373783 ID=MS.gene02651.t1.exon8;Parent=MS.gene02651.t1
chr3.1 CDS 72373783 72373878 72373783 ID=cds.MS.gene02651.t1;Parent=MS.gene02651.t1
chr3.1 exon 72373968 72374129 72373968 ID=MS.gene02651.t1.exon9;Parent=MS.gene02651.t1
chr3.1 CDS 72373968 72374129 72373968 ID=cds.MS.gene02651.t1;Parent=MS.gene02651.t1
chr3.1 exon 72374241 72374357 72374241 ID=MS.gene02651.t1.exon10;Parent=MS.gene02651.t1
chr3.1 CDS 72374241 72374357 72374241 ID=cds.MS.gene02651.t1;Parent=MS.gene02651.t1
Gene Sequence

>MS.gene02651

ATGTCGAGTACAGCTGGTCAAGTCATCAAATGCAAAGGTATGATCACTGGATTTATTGGATCAAATTTCAATTTGTAACTAGAAAATTGTAATTATAATTATATATAGTATACGATACTCGTTCCGTCTCAGATTAAGTGTGCCATTTGATTTAAAAACGATTATTAAGAAAATGATTAGTTGAATTGACTTTAATGGTAAAATTAACATCATTTCTAAAATATCTTTATTAAATGTACTATTAGTGCAAAAGAAAACAATAAATGTTGCCTGGTTATTTTAAAGTGACAGCAATTTTAAAACAAAGAAAGAAAATGCAAAAGTGACACATATTTGGAGTAGTATACAATTGGTTCAATTAACAGACCAATAAAAACAATCAAAATTTACGGGGAAATGTTAACGAGTGTCCCCGGGGCACTCTTTAAATTTGGAGTAGTATACAATTGGTTCAATTAACAGACCAATAAAAACAATCAAAATTTACGGGGAAATGTTAACGAGTGTCCCCGGGGCACTCTTTAAGGAACATAAGTAGCAAGTATTTATGAAAATACATGTAATTATTGCATTGGAAATTGAAATATTTGACTTTTTAAAATGATAATTGCTTATTTTAGTATGCTTAAAGAGTGTCCCGGAGACACTCGTTAACAAGACCCAAAATTTATAAAGGAAGAGGGCATAAGAATATTCTAGAAACGAAAAGGAGAACCAGGTGGTATAATTTGTGGCTTGGTGGTAAAGTCAAATCCCAAAGGCGCAGCTGGTAAAATGGTAAAATATTTCTTTTTTTTTGAACAAGTGGTAAAATATTTCTTGTCCAAAAATTAAGTTGTAAAATGTTTCTTGTCCAAAAATTAAAGTTATAAAATGTGTCTTGTCCAAAAATTAATTACTATGTTTAGAAAATCACTCGGTTTTTTCACTACTATAAATGAAGGTCACTGACAGTAGTTGGTTCCCCACTCAACTCACTCATAATCATCTTTTGTTAATTAACTATGTCGAACACTGTTGGTCAGGTCATCAAGTGCAGAGGTACCATGTCCTCTTTTTCTCTTTGTTACAAACATGTTGTACAAATTGTGTTTTGCTTTTTATGGATCTAAGGGTCCATTTGGATTGTGTTTCTTTCTTTATTAAGAATAGTTTTTTTTTTTTTTTTGCGTACTATTCCGATCATTTTATATCTGCAGCTGCGGTTGCATGGGAGGCGGGGAAGCCGCTGGTGATGGAGGAAGTGGAGGTGGCGCCACCACAAGCCGGTGAAGTCCGTCTCAAGATACTCTTCACCTCCCTTTGTCATACTGATGTTTACTTCTGGGAAGCTAAGGTATATTATAAATACTATACATGCAGTTTTATAAATTTAGACATTAAGCTTCACTCTTATGATTTTAGTTTGATTTGATTGTATATGAAAAGGGGGTGTTTAGTTTCTTTTGCATAACATAAAATTCTTCTGAGTTTAATTTTAGGGGGGTGTATTGGATCATGATTCTAAGGGATTTTAAAAGACTTTTTTATCATGAAAAAGTCTTGTGGTATTCAATCAAGACTCTTTCCAATTTAAAAAAAGTCTTGTGTTATTCAATCAAGATTCTTTGTCATTTAAAAAAAGTCTTGTGGTATTCAATCAAGACTCTTAATCACTTAAAAAAAGTCTAGTGGTATTCAAAATCATTCAAATTTCGAAGGATTGTTTAATAAATCAGATTTTGATGGATTTTGTGGGATTTTCTAGTGAAATTTTAGCATAAAAAAGTCTTTCATGAAAACATGAGATTTCTTAGGATTGTTTTTTTCTTTTAAGATTTTACTATCTCTCCCTCTCTCTCTCTCCTCCCTTCTATCTCTCCATCTCTCTCTCTTACTCTCTCTTTTCCTCCCCCCTCTCTCTCTGTCTCTCTCTCTCTCTCTTCCTCTCTCTCGCCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTCTCCCGTAAAAAATAAAGTAAAATAAATAAAAGAGTCTTTATTGAGATTTTGTGAAAGAGAATGTGTTATGATATTTTTTTCAATTATTTCTTAAAATTCATAAAATCTGTTGAAATCTCTTGAAATCCATAAAGTCATTTCAAATCCTTTAAAATCTTATGAATTAAATCTATTGAAATCCTTAAAAGTCTTTTAAAATCATCAAAGTCATCAAAATCCTGCAAAGTCTTTTAAAATCCTCAAGACATTTTTAAACAAAAATTGTCCTTTGAAATCCTAATCCAATACACCCTCCTTAGATTAAAGGAAATTAAGCTGGTGATTGGAGTCTTTTTTAATCTGGGTGTTTCAGTGTCATGTTATGCATCGCAATAGCTCAAGTAATTGTTTTATTCTTTCCTTCTGTTTCAGGGTCAAACTCCATTGTTTCCTCGTATTTTTGGTCATGAAGCTGGAGGGTATGTTTCTCTTCTCAATACTAAAAGTTGAACTACATATCTTAAATATTTAATTAATTCTTGTTTTTTGAGGGGTTCCTTGTAAAGGATTCAATTCATATACTTTGCTAATGTAATTTTTTTACAATGTCAATCAATTATAATTGCAAGATCATTAATTTTTTAACTTCTTTGAAGACCACAGATATGATTGATTTATTGTAATTTGTTGACTGCATGAAACTTTTTAGAATCAATCAAAATGAAGATGATATTTTAATATACACTACTTCATTTTTCTTACTATATGGTTTTGACAAAGACTGTTTTTTGATGAAATCTTTTGATTATCTAATGTAATATGAATGAATTTTATTCATAATGTTGGCATGATGTTGATCAGGATTGTGGAGAGCGTAGGCGAGGGTGTGACACATCTAAAACCAGGGGATCATGCCCTGCCTGTATTCACAGGGGAGTGTGGGGACTGTCCACATTGTAAGTCAGAGGAGAGCAACATGTGTGATCTTCTTAGGATCAACACTGACAGGGGTGTCATGATCAATGACAATCAGTCAAGATTCTCTATTAAGGGACAGCCCATTCATCATTTCGTCGGCACATCGACATTCAGTGAATATACTGTTGTTCATGCTGGATGTGTTGCAAAGATCAACCCTGATGCACCACTTGACAAAGTTTGTATTCTCAGCTGTGGAATATGCACAGGTATGAGCTGGTTTGGGTTGACTTATTTAAGCTTATCTATTGAAATAAGCATATGTTAGACTTTGAGAGAGCTTATGAAAACAACTTATGTCATGACCATAAGTTGTTTTAAACTTATTTTTATAATCTCTCTAGGATAGTTTATGAAAACAATTTATAGTTTATATATGAAAACAATGACTTTATTTTTATATTTCATTATGGAAATAGCTTATGCGTAAGTACTTAAATGATAAGGGCTTATACTGTAAACTCTTATTAATTAAGCTGTTTATCCAAGTAGTGTATAATATATCCTTGCATTGAGATATTAATATATAACTAGGTTGAGTATATGATTTCCTAATTCAATTTGCATTCATGGTTGTAGGTCTTGGTGCTACCATCAATGTTGCTAAGCCGAAACCCGGTTCATCTGTTGCTATCTTTGGACTTGGAGCTGTTGGCCTTGCTGTATGTTACTTTTATACCATGAGTGTGTGTGTTTGTGTTACTGTTATCATATATAGAAACTAAAAAGATTCAATAATACAAATTTCAGGCTGCTGAAGGAGCAAGGATATCTGGTGCATCAAGAATCATTGGAGTCGATTTAGTTTCTAGCCGATTTGAATTAGGTACAATGCTTTTCTTATTCCATTAAATGATTTAAGATTGAGGTCAACCTAAGTTATATGACTTAATTTTTGAAATATTCTTGGTCTCAGCTAAGAAGTTTGGGGTAAATGAGTTTGTGAACCCAAAAGATCATGACAAACCCGTACAACAGGTTAGTTCAACAAAAAATTAGTGTTTACATTTATATTCTCTCTAAACTTTGTTAATTGAATATGGAAATTCAAATTTGATGCTATGCATTAAACATGCTGTGTCATTTTGTGTGCAAGGTAATTGCTGAAATGACAAATGGAGGTGTGGATCGTGCTGTTGAATGTACTGGGAGCATCCAGGCCATGATCTCAGCTTTCGAATGTGTCCACGATGTATGCAAAACAAAATTCATTTGTTCTTACTTGTTGCGAAAGAAGTTATAAAGCTTACTGAGGCTAAAGCCTTGATTTGTTTTTCTTAGGGTTGGGGTGTTGCTGTACTTGTTGGAGTTCCAAACAAAGATGATGCATTCAAAACTCACCCTATGAATTTGTTGAATGAAAGGACTCTTAAGGGTACCTTTTATGGTAATTACAAACCCCGCACTGATCTTCCTAATGTTGTAGAGAAGTACATGAAAGGGGTAAGTTTATTTATATTGAATTGTGCAAACTTTTAGTAGAAGTGAGTGATCACAAACGTAGATTGATATTATTTATGTTGATGCTAATTTGTTGATAATTTGATACTGCAGGAGCTGGAACTTGAGAAATTCATCACTCACTCAATTCCATTTTCAGAGATTAACAAAGCTTTTGATTACATGCTGAAAGGAGAGTCCATCAGATGCATCATCCGAATGGAGGAGTAA
Protein sequence

>MS.gene02651.t1

MSSTAGQVIKCKAAVAWEAGKPLVMEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGDCPHCKSEESNMCDLLRINTDRGVMINDNQSRFSIKGQPIHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHSIPFSEINKAFDYMLKGESIRCIIRMEE