Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013671.t1 | XP_013461377.1 | 98.4 | 380 | 6 | 0 | 1 | 380 | 1 | 380 | 2.10E-220 | 774.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013671.t1 | P12886 | 95.5 | 380 | 17 | 0 | 1 | 380 | 1 | 380 | 8.3e-218 | 757.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013671.t1 | A0A072V0U2 | 98.4 | 380 | 6 | 0 | 1 | 380 | 1 | 380 | 1.5e-220 | 774.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000484 | MS.gene013671 | PPI |
| MS.gene56778 | MS.gene013671 | PPI |
| MS.gene013671 | MS.gene70145 | PPI |
| MS.gene49741 | MS.gene013671 | PPI |
| MS.gene013671 | MS.gene042841 | PPI |
| MS.gene50792 | MS.gene013671 | PPI |
| MS.gene77397 | MS.gene013671 | PPI |
| MS.gene011817 | MS.gene013671 | PPI |
| MS.gene013671 | MS.gene000485 | PPI |
| MS.gene041083 | MS.gene013671 | PPI |
| MS.gene013671 | MS.gene79768 | PPI |
| MS.gene015154 | MS.gene013671 | PPI |
| MS.gene010354 | MS.gene013671 | PPI |
| MS.gene069033 | MS.gene013671 | PPI |
| MS.gene069804 | MS.gene013671 | PPI |
| MS.gene030545 | MS.gene013671 | PPI |
| MS.gene83309 | MS.gene013671 | PPI |
| MS.gene95648 | MS.gene013671 | PPI |
| MS.gene77398 | MS.gene013671 | PPI |
| MS.gene89779 | MS.gene013671 | PPI |
| MS.gene73688 | MS.gene013671 | PPI |
| MS.gene95649 | MS.gene013671 | PPI |
| MS.gene037523 | MS.gene013671 | PPI |
| MS.gene047628 | MS.gene013671 | PPI |
| MS.gene99200 | MS.gene013671 | PPI |
| MS.gene70056 | MS.gene013671 | PPI |
| MS.gene90510 | MS.gene013671 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013671.t1 | MTR_3g089977 | 98.421 | 380 | 6 | 0 | 1 | 380 | 1 | 380 | 0.0 | 778 |
| MS.gene013671.t1 | MTR_3g089940 | 97.632 | 380 | 9 | 0 | 1 | 380 | 1 | 380 | 0.0 | 771 |
| MS.gene013671.t1 | MTR_3g089940 | 97.632 | 380 | 9 | 0 | 1 | 380 | 1 | 380 | 0.0 | 770 |
| MS.gene013671.t1 | MTR_3g089970 | 96.063 | 381 | 14 | 1 | 1 | 380 | 1 | 381 | 0.0 | 755 |
| MS.gene013671.t1 | MTR_3g089940 | 97.661 | 342 | 8 | 0 | 1 | 342 | 1 | 342 | 0.0 | 696 |
| MS.gene013671.t1 | MTR_3g089940 | 97.661 | 342 | 8 | 0 | 1 | 342 | 1 | 342 | 0.0 | 694 |
| MS.gene013671.t1 | MTR_7g099040 | 58.355 | 377 | 157 | 0 | 2 | 378 | 3 | 379 | 1.74e-170 | 481 |
| MS.gene013671.t1 | MTR_1g069430 | 56.533 | 375 | 163 | 0 | 4 | 378 | 3 | 377 | 1.80e-164 | 466 |
| MS.gene013671.t1 | MTR_6g068930 | 50.928 | 377 | 181 | 2 | 2 | 378 | 3 | 375 | 2.81e-142 | 409 |
| MS.gene013671.t1 | MTR_7g068320 | 48.564 | 383 | 191 | 5 | 1 | 378 | 12 | 393 | 2.73e-127 | 372 |
| MS.gene013671.t1 | MTR_7g068330 | 48.556 | 381 | 191 | 4 | 2 | 378 | 6 | 385 | 5.96e-127 | 370 |
| MS.gene013671.t1 | MTR_3g099460 | 49.735 | 378 | 184 | 4 | 6 | 378 | 13 | 389 | 1.11e-120 | 355 |
| MS.gene013671.t1 | MTR_5g087710 | 45.187 | 374 | 203 | 2 | 7 | 378 | 16 | 389 | 1.17e-119 | 352 |
| MS.gene013671.t1 | MTR_3g099460 | 49.206 | 378 | 179 | 5 | 6 | 378 | 13 | 382 | 1.92e-116 | 343 |
| MS.gene013671.t1 | MTR_3g079180 | 42.744 | 379 | 215 | 2 | 2 | 378 | 6 | 384 | 9.83e-110 | 327 |
| MS.gene013671.t1 | MTR_3g099460 | 49.221 | 321 | 159 | 3 | 61 | 378 | 7 | 326 | 9.91e-97 | 291 |
| MS.gene013671.t1 | MTR_0001s0660 | 39.523 | 377 | 218 | 5 | 5 | 378 | 4 | 373 | 6.83e-90 | 278 |
| MS.gene013671.t1 | MTR_5g045710 | 39.474 | 380 | 222 | 6 | 1 | 378 | 1 | 374 | 7.02e-90 | 275 |
| MS.gene013671.t1 | MTR_3g099460 | 51.943 | 283 | 130 | 4 | 6 | 283 | 13 | 294 | 7.00e-85 | 261 |
| MS.gene013671.t1 | MTR_3g099460 | 51.237 | 283 | 125 | 5 | 6 | 283 | 13 | 287 | 1.05e-80 | 250 |
| MS.gene013671.t1 | MTR_3g079170 | 41.818 | 275 | 138 | 4 | 101 | 370 | 25 | 282 | 4.75e-69 | 219 |
| MS.gene013671.t1 | MTR_5g045710 | 37.075 | 294 | 181 | 3 | 86 | 378 | 1 | 291 | 2.21e-62 | 202 |
| MS.gene013671.t1 | MTR_8g095220 | 31.579 | 380 | 237 | 15 | 12 | 378 | 55 | 424 | 7.20e-45 | 160 |
| MS.gene013671.t1 | MTR_8g095220 | 31.250 | 256 | 162 | 8 | 12 | 258 | 55 | 305 | 1.27e-31 | 122 |
| MS.gene013671.t1 | MTR_6g465010 | 25.405 | 370 | 224 | 13 | 16 | 369 | 3 | 336 | 5.44e-22 | 96.3 |
| MS.gene013671.t1 | MTR_6g466320 | 25.405 | 370 | 224 | 13 | 16 | 369 | 19 | 352 | 5.87e-22 | 96.3 |
| MS.gene013671.t1 | MTR_6g465010 | 25.405 | 370 | 224 | 13 | 16 | 369 | 19 | 352 | 5.87e-22 | 96.3 |
| MS.gene013671.t1 | MTR_5g031190 | 23.810 | 378 | 244 | 15 | 12 | 379 | 11 | 354 | 8.73e-14 | 72.4 |
| MS.gene013671.t1 | MTR_4g115300 | 26.000 | 350 | 218 | 11 | 37 | 379 | 39 | 354 | 3.34e-13 | 70.5 |
| MS.gene013671.t1 | MTR_5g031390 | 24.642 | 349 | 224 | 10 | 37 | 379 | 39 | 354 | 4.08e-13 | 70.5 |
| MS.gene013671.t1 | MTR_5g031230 | 23.782 | 349 | 227 | 11 | 37 | 379 | 39 | 354 | 7.13e-12 | 66.6 |
| MS.gene013671.t1 | MTR_5g031210 | 24.566 | 346 | 228 | 11 | 37 | 379 | 39 | 354 | 1.42e-11 | 65.5 |
| MS.gene013671.t1 | MTR_5g031360 | 22.767 | 347 | 233 | 9 | 37 | 379 | 41 | 356 | 4.55e-11 | 63.9 |
| MS.gene013671.t1 | MTR_5g031250 | 22.478 | 347 | 234 | 11 | 37 | 379 | 39 | 354 | 5.31e-11 | 63.9 |
| MS.gene013671.t1 | MTR_5g031180 | 23.262 | 374 | 251 | 13 | 12 | 379 | 11 | 354 | 6.19e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013671.t1 | AT1G77120 | 84.350 | 377 | 59 | 0 | 3 | 379 | 2 | 378 | 0.0 | 675 |
| MS.gene013671.t1 | AT5G43940 | 58.713 | 373 | 154 | 0 | 4 | 376 | 3 | 375 | 1.63e-168 | 476 |
| MS.gene013671.t1 | AT5G43940 | 56.623 | 385 | 155 | 1 | 4 | 376 | 3 | 387 | 2.55e-164 | 466 |
| MS.gene013671.t1 | AT5G24760 | 52.151 | 372 | 174 | 2 | 7 | 378 | 12 | 379 | 5.26e-147 | 421 |
| MS.gene013671.t1 | AT1G64710 | 49.206 | 378 | 189 | 2 | 4 | 378 | 3 | 380 | 3.83e-141 | 406 |
| MS.gene013671.t1 | AT1G32780 | 49.487 | 390 | 187 | 2 | 1 | 380 | 1 | 390 | 5.02e-141 | 407 |
| MS.gene013671.t1 | AT5G24760 | 51.130 | 354 | 169 | 2 | 25 | 378 | 1 | 350 | 3.67e-136 | 392 |
| MS.gene013671.t1 | AT5G24760 | 51.130 | 354 | 169 | 2 | 25 | 378 | 1 | 350 | 3.67e-136 | 392 |
| MS.gene013671.t1 | AT1G64710 | 48.179 | 357 | 182 | 2 | 25 | 378 | 1 | 357 | 1.77e-129 | 376 |
| MS.gene013671.t1 | AT5G42250 | 46.524 | 374 | 197 | 3 | 9 | 379 | 17 | 390 | 4.16e-120 | 353 |
| MS.gene013671.t1 | AT1G22440 | 48.831 | 385 | 184 | 6 | 2 | 378 | 5 | 384 | 3.23e-118 | 348 |
| MS.gene013671.t1 | AT1G22430 | 46.719 | 381 | 200 | 3 | 1 | 378 | 6 | 386 | 7.85e-116 | 342 |
| MS.gene013671.t1 | AT1G22430 | 46.719 | 381 | 200 | 3 | 1 | 378 | 6 | 386 | 7.85e-116 | 342 |
| MS.gene013671.t1 | AT4G22110 | 46.719 | 381 | 194 | 4 | 6 | 380 | 12 | 389 | 1.26e-113 | 337 |
| MS.gene013671.t1 | AT4G22110 | 46.719 | 381 | 194 | 4 | 6 | 380 | 12 | 389 | 1.26e-113 | 337 |
| MS.gene013671.t1 | AT1G64710 | 47.059 | 306 | 160 | 1 | 75 | 378 | 6 | 311 | 3.99e-107 | 317 |
| MS.gene013671.t1 | AT5G24760 | 47.368 | 266 | 139 | 1 | 113 | 378 | 1 | 265 | 2.40e-92 | 278 |
| MS.gene013671.t1 | AT1G22430 | 50.000 | 286 | 140 | 3 | 1 | 283 | 6 | 291 | 8.43e-90 | 273 |
| MS.gene013671.t1 | AT1G22430 | 51.406 | 249 | 119 | 2 | 1 | 247 | 6 | 254 | 2.99e-81 | 251 |
| MS.gene013671.t1 | AT1G22430 | 51.406 | 249 | 119 | 2 | 1 | 247 | 6 | 254 | 2.99e-81 | 251 |
| MS.gene013671.t1 | AT4G22110 | 51.626 | 246 | 111 | 3 | 6 | 246 | 12 | 254 | 6.58e-77 | 239 |
| MS.gene013671.t1 | AT5G63620 | 31.016 | 374 | 234 | 14 | 12 | 372 | 57 | 419 | 1.45e-40 | 149 |
| MS.gene013671.t1 | AT5G63620 | 30.376 | 372 | 239 | 12 | 12 | 372 | 57 | 419 | 4.27e-40 | 147 |
| MS.gene013671.t1 | AT5G63620 | 30.800 | 250 | 158 | 8 | 12 | 251 | 57 | 301 | 5.43e-28 | 112 |
| MS.gene013671.t1 | AT5G51970 | 23.454 | 388 | 243 | 14 | 1 | 371 | 6 | 356 | 1.59e-17 | 83.6 |
| MS.gene013671.t1 | AT5G51970 | 23.454 | 388 | 243 | 14 | 1 | 371 | 6 | 356 | 1.59e-17 | 83.6 |
| MS.gene013671.t1 | AT1G72680 | 25.223 | 337 | 217 | 9 | 37 | 370 | 37 | 341 | 1.41e-13 | 71.6 |
| MS.gene013671.t1 | AT4G37990 | 24.444 | 315 | 207 | 8 | 37 | 346 | 35 | 323 | 4.40e-12 | 67.4 |
Find 120 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGTTTGTCATGATCTTTC+GGG | 0.232230 | 3.3:-75477517 | None:intergenic |
| GGTTCATCTGTTGCTATCTT+TGG | 0.236969 | 3.3:+75477134 | MS.gene013671:CDS |
| GCTTTGTTAATCTCTGAAAA+TGG | 0.242441 | 3.3:-75478163 | None:intergenic |
| GTTTCCAGCCGATATGAATT+AGG | 0.257110 | 3.3:+75477356 | MS.gene013671:CDS |
| GTCACACTGATGTTTACTTC+TGG | 0.274790 | 3.3:+75476254 | MS.gene013671:CDS |
| TTGTTGGCAGCTAAGAAGTT+TGG | 0.287505 | 3.3:+75477476 | MS.gene013671:intron |
| CCATTGTTTCCTCGTATATT+TGG | 0.294860 | 3.3:+75476496 | MS.gene013671:CDS |
| ACAGGTTTGTCATGATCTTT+CGG | 0.301321 | 3.3:-75477518 | None:intergenic |
| GCAACAGATGAACCGGGTTT+TGG | 0.302998 | 3.3:-75477125 | None:intergenic |
| TCAGTCAAGATTCTCTATTA+AGG | 0.310729 | 3.3:+75476848 | MS.gene013671:CDS |
| GCAACATGTGTGATCTTCTT+AGG | 0.311495 | 3.3:+75476790 | MS.gene013671:CDS |
| TGTTGGCAGCTAAGAAGTTT+GGG | 0.311983 | 3.3:+75477477 | MS.gene013671:intron |
| GCTGAAGGGGCAAGGATGTC+TGG | 0.323064 | 3.3:+75477305 | MS.gene013671:CDS |
| TGGGGTGTTGCTGTACTTGT+TGG | 0.336473 | 3.3:+75477863 | MS.gene013671:CDS |
| GTTGAATGAAAGGACTCTTA+AGG | 0.347627 | 3.3:+75477931 | MS.gene013671:CDS |
| CTTTCATTCAACAAATTCAT+AGG | 0.348960 | 3.3:-75477920 | None:intergenic |
| ATCTTTGGACTTGGAGCTGT+TGG | 0.351212 | 3.3:+75477149 | MS.gene013671:CDS |
| TTGAATGAAAGGACTCTTAA+GGG | 0.375052 | 3.3:+75477932 | MS.gene013671:CDS |
| GTTGAACTAACTTGTTGAAC+AGG | 0.390252 | 3.3:-75477536 | None:intergenic |
| ACTTTGTCAAGAGGTGCATC+AGG | 0.391287 | 3.3:-75476954 | None:intergenic |
| GCTGCGGTTGCATGGGAGGC+GGG | 0.399452 | 3.3:+75476148 | MS.gene013671:intron |
| TCACACTGATGTTTACTTCT+GGG | 0.404127 | 3.3:+75476255 | MS.gene013671:CDS |
| GGCGGGGAAGCCACTGGTGA+TGG | 0.404743 | 3.3:+75476165 | MS.gene013671:CDS |
| AAAGATAGCAACAGATGAAC+CGG | 0.416086 | 3.3:-75477132 | None:intergenic |
| TGGAACCAGCTGCGGTTGCA+TGG | 0.416145 | 3.3:+75476140 | MS.gene013671:intron |
| TGAAATGCATCGTCTTTGTT+TGG | 0.418800 | 3.3:-75477890 | None:intergenic |
| TCTGTTGCTATCTTTGGACT+TGG | 0.419387 | 3.3:+75477140 | MS.gene013671:CDS |
| GATATTACAGGAACTGGAAC+TGG | 0.426601 | 3.3:+75478117 | MS.gene013671:intron |
| CAGTCAAGATTCTCTATTAA+GGG | 0.430904 | 3.3:+75476849 | MS.gene013671:CDS |
| CGTATATTTGGTCATGAAGC+TGG | 0.431276 | 3.3:+75476508 | MS.gene013671:CDS |
| AGCTGCGGTTGCATGGGAGG+CGG | 0.441799 | 3.3:+75476147 | MS.gene013671:intron |
| ATCAGATGTATCATACGAAT+GGG | 0.445545 | 3.3:+75478214 | MS.gene013671:CDS |
| TTGTAGAAAAGTACATGAAA+GGG | 0.453615 | 3.3:+75477999 | MS.gene013671:CDS |
| TCTGGTGCATCAAGAATCAT+TGG | 0.470218 | 3.3:+75477323 | MS.gene013671:CDS |
| CCACACTCCCCTGTGAATAC+AGG | 0.474104 | 3.3:-75476738 | None:intergenic |
| CCTGTATTCACAGGGGAGTG+TGG | 0.474817 | 3.3:+75476738 | MS.gene013671:CDS |
| CTATGAATTTGTTGAATGAA+AGG | 0.476135 | 3.3:+75477921 | MS.gene013671:CDS |
| CATGCCCTGCCTGTATTCAC+AGG | 0.480140 | 3.3:+75476729 | MS.gene013671:CDS |
| ACAGGCAGGGCATGATCCCC+TGG | 0.483648 | 3.3:-75476720 | None:intergenic |
| CTGTATTCACAGGGGAGTGT+GGG | 0.483700 | 3.3:+75476739 | MS.gene013671:CDS |
| ACCAGCTGCGGTTGCATGGG+AGG | 0.486050 | 3.3:+75476144 | MS.gene013671:intron |
| ATGGGAGGCGGGGAAGCCAC+TGG | 0.486618 | 3.3:+75476159 | MS.gene013671:CDS |
| TGTACCTAATTCATATCGGC+TGG | 0.489612 | 3.3:-75477360 | None:intergenic |
| ACCAAAATTTAGGCTGCTGA+AGG | 0.497900 | 3.3:+75477290 | MS.gene013671:intron |
| TTCTTAGGATCAACACGGAC+AGG | 0.502318 | 3.3:+75476805 | MS.gene013671:CDS |
| TTAACCATGTCCAACACTGC+TGG | 0.504696 | 3.3:+75475778 | None:intergenic |
| GGAACCAGCTGCGGTTGCAT+GGG | 0.505012 | 3.3:+75476141 | MS.gene013671:intron |
| GCATTGTACCTAATTCATAT+CGG | 0.505878 | 3.3:-75477364 | None:intergenic |
| GTTGTAGAAAAGTACATGAA+AGG | 0.509192 | 3.3:+75477998 | MS.gene013671:CDS |
| AACCTTAGGAAGATCAGTGC+GGG | 0.515441 | 3.3:-75477978 | None:intergenic |
| CCAAAATTTAGGCTGCTGAA+GGG | 0.515926 | 3.3:+75477291 | MS.gene013671:intron |
| ATGTAGATGTACCGACGAAA+TGG | 0.519367 | 3.3:-75476884 | None:intergenic |
| CATTCGTATGATACATCTGA+TGG | 0.531716 | 3.3:-75478212 | None:intergenic |
| CTGCGGTTGCATGGGAGGCG+GGG | 0.533283 | 3.3:+75476149 | MS.gene013671:CDS |
| CTCAGCTGTGGAATATGCAC+AGG | 0.542001 | 3.3:+75476984 | MS.gene013671:CDS |
| TGTTTACTTCTGGGAAGCTA+AGG | 0.543162 | 3.3:+75476264 | MS.gene013671:CDS |
| AGACGGACTTCACCGGCTTG+TGG | 0.546092 | 3.3:-75476208 | None:intergenic |
| CATCAGATGTATCATACGAA+TGG | 0.550987 | 3.3:+75478213 | MS.gene013671:CDS |
| AGTAAACATCAGTGTGACAA+AGG | 0.551878 | 3.3:-75476249 | None:intergenic |
| TCTAATGTCGATCAGGATTG+TGG | 0.553261 | 3.3:+75476665 | MS.gene013671:intron |
| GTACCGACGAAATGGTGAAT+CGG | 0.555313 | 3.3:-75476876 | None:intergenic |
| AAAGTTTGTATTCTCAGCTG+TGG | 0.560671 | 3.3:+75476972 | MS.gene013671:CDS |
| GTTGGCAGCTAAGAAGTTTG+GGG | 0.561606 | 3.3:+75477478 | MS.gene013671:intron |
| TATCTTGAGACGGACTTCAC+CGG | 0.564597 | 3.3:-75476215 | None:intergenic |
| TGAATGTACCGGTAGCATCC+AGG | 0.564756 | 3.3:+75477707 | MS.gene013671:CDS |
| GATCATAGCCTGGATGCTAC+CGG | 0.570554 | 3.3:-75477715 | None:intergenic |
| GGTGTGACAGATCTAAAACC+AGG | 0.572762 | 3.3:+75476702 | MS.gene013671:CDS |
| GTAAACATCAGTGTGACAAA+GGG | 0.577816 | 3.3:-75476248 | None:intergenic |
| ACCCCGCACTGATCTTCCTA+AGG | 0.578506 | 3.3:+75477976 | MS.gene013671:CDS |
| CAAAATTTAGGCTGCTGAAG+GGG | 0.579040 | 3.3:+75477292 | MS.gene013671:intron |
| ACTCCCCTGTGAATACAGGC+AGG | 0.579461 | 3.3:-75476734 | None:intergenic |
| GAGTACACTGTGGTTCATGC+CGG | 0.586769 | 3.3:+75476912 | MS.gene013671:CDS |
| AGAATACAAACTTTGTCAAG+AGG | 0.589584 | 3.3:-75476963 | None:intergenic |
| TTTAGGCTGCTGAAGGGGCA+AGG | 0.589857 | 3.3:+75477297 | MS.gene013671:intron |
| CCAAATATACGAGGAAACAA+TGG | 0.590862 | 3.3:-75476496 | None:intergenic |
| TGTATTCACAGGGGAGTGTG+GGG | 0.591767 | 3.3:+75476740 | MS.gene013671:CDS |
| GATTGTGGAGAGCGTAGGCG+AGG | 0.594735 | 3.3:+75476680 | MS.gene013671:CDS |
| TCTTAGGATCAACACGGACA+GGG | 0.595918 | 3.3:+75476806 | MS.gene013671:CDS |
| GAGGTGGCGCCACCACAAGC+CGG | 0.602446 | 3.3:+75476196 | MS.gene013671:CDS |
| GATGATCTGACCAGCAGTGT+TGG | 0.604173 | 3.3:-75475788 | None:intergenic |
| TGTAGAAAAGTACATGAAAG+GGG | 0.605963 | 3.3:+75478000 | MS.gene013671:CDS |
| CTTTGTCAAGAGGTGCATCA+GGG | 0.608085 | 3.3:-75476953 | None:intergenic |
| GTGTGACAGATCTAAAACCA+GGG | 0.609191 | 3.3:+75476703 | MS.gene013671:CDS |
| CGAATGCGGAGATCATAGCC+TGG | 0.612238 | 3.3:-75477725 | None:intergenic |
| ACTGGTGATGGAAGAAGTAG+AGG | 0.612676 | 3.3:+75476177 | MS.gene013671:CDS |
| ACTTGGAGCTGTTGGCCTTG+CGG | 0.616948 | 3.3:+75477157 | MS.gene013671:CDS |
| TCTACTTCTTCCATCACCAG+TGG | 0.617716 | 3.3:-75476175 | None:intergenic |
| CGGACTTCACCGGCTTGTGG+TGG | 0.618100 | 3.3:-75476205 | None:intergenic |
| CTGTCCACATTGTAAGTCAG+AGG | 0.618115 | 3.3:+75476764 | MS.gene013671:CDS |
| AGCACGATCCACACCTCCGT+TGG | 0.619268 | 3.3:-75477682 | None:intergenic |
| CAGCCGATTCACCATTTCGT+CGG | 0.625858 | 3.3:+75476873 | MS.gene013671:CDS |
| ATCGTGGACACATTCGAATG+CGG | 0.633600 | 3.3:-75477739 | None:intergenic |
| CTCTCCTCTGACTTACAATG+TGG | 0.634714 | 3.3:-75476768 | None:intergenic |
| GATCGTGCTGTTGAATGTAC+CGG | 0.639046 | 3.3:+75477696 | MS.gene013671:CDS |
| ATATTTGGTCATGAAGCTGG+AGG | 0.639817 | 3.3:+75476511 | MS.gene013671:CDS |
| ATGCCCTGCCTGTATTCACA+GGG | 0.640094 | 3.3:+75476730 | MS.gene013671:CDS |
| AACATCAGTGTGACAAAGGG+AGG | 0.641785 | 3.3:-75476245 | None:intergenic |
| AGGTGAAGAGTATCTTGAGA+CGG | 0.642729 | 3.3:-75476225 | None:intergenic |
| TCAGATGTATCATACGAATG+GGG | 0.645185 | 3.3:+75478215 | MS.gene013671:CDS |
| GGTCAGATCATCAAGTGTAG+AGG | 0.647505 | 3.3:+75475799 | MS.gene013671:CDS |
| CAGATGTATCATACGAATGG+GGG | 0.655213 | 3.3:+75478216 | MS.gene013671:CDS |
| CTGACCAGCAGTGTTGGACA+TGG | 0.657057 | 3.3:-75475782 | None:intergenic |
| ATCAGGATTGTGGAGAGCGT+AGG | 0.659938 | 3.3:+75476675 | MS.gene013671:intron |
| TATTTGGTCATGAAGCTGGA+GGG | 0.661233 | 3.3:+75476512 | MS.gene013671:CDS |
| CTTAGGATCAACACGGACAG+GGG | 0.662424 | 3.3:+75476807 | MS.gene013671:CDS |
| ATTGTGGAGAGCGTAGGCGA+GGG | 0.662603 | 3.3:+75476681 | MS.gene013671:CDS |
| AAGATAGCAACAGATGAACC+GGG | 0.667433 | 3.3:-75477131 | None:intergenic |
| GGTGATGGAAGAAGTAGAGG+TGG | 0.673070 | 3.3:+75476180 | MS.gene013671:CDS |
| CTCCCCTGTGAATACAGGCA+GGG | 0.674123 | 3.3:-75476733 | None:intergenic |
| AATGTTGCTAAACCAAAACC+CGG | 0.674195 | 3.3:+75477113 | MS.gene013671:CDS |
| TGAAATGACCAACGGAGGTG+TGG | 0.677840 | 3.3:+75477674 | MS.gene013671:CDS |
| GTAATTGCTGAAATGACCAA+CGG | 0.682154 | 3.3:+75477666 | MS.gene013671:CDS |
| ACCTTAGGAAGATCAGTGCG+GGG | 0.690568 | 3.3:-75477977 | None:intergenic |
| CAACCTTAGGAAGATCAGTG+CGG | 0.707330 | 3.3:-75477979 | None:intergenic |
| TGTGACAGATCTAAAACCAG+GGG | 0.720106 | 3.3:+75476704 | MS.gene013671:CDS |
| GCTTCATGACCAAATATACG+AGG | 0.725898 | 3.3:-75476505 | None:intergenic |
| TGCCCTGCCTGTATTCACAG+GGG | 0.737931 | 3.3:+75476731 | MS.gene013671:CDS |
| TGATCTTCTTAGGATCAACA+CGG | 0.743683 | 3.3:+75476800 | MS.gene013671:CDS |
| ATTGCTGAAATGACCAACGG+AGG | 0.744796 | 3.3:+75477669 | MS.gene013671:CDS |
| TACATTCAGCGAGTACACTG+TGG | 0.749330 | 3.3:+75476902 | MS.gene013671:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTAAAATTAATTTATAGT+TGG | - | chr3.3:75475926-75475945 | None:intergenic | 10.0% |
| !! | ATATATTAATATCTAAACAT+TGG | - | chr3.3:75477021-75477040 | None:intergenic | 10.0% |
| !!! | TAATTTTAGTTACAAAATAT+TGG | + | chr3.3:75476365-75476384 | MS.gene013671:intron | 10.0% |
| !!! | TTTTTTTTAAACCAAAATTT+AGG | + | chr3.3:75477280-75477299 | MS.gene013671:intron | 10.0% |
| !! | AAAACAAATAACAATCTAAA+TGG | - | chr3.3:75475892-75475911 | None:intergenic | 15.0% |
| !! | AGATATTAATATATGTTTCT+AGG | + | chr3.3:75477027-75477046 | MS.gene013671:intron | 15.0% |
| !! | ATTTATGTATAATTCTTCTT+AGG | + | chr3.3:75476340-75476359 | MS.gene013671:intron | 15.0% |
| !! | TTGTAAATTGCAATTATTAT+CGG | + | chr3.3:75477226-75477245 | MS.gene013671:intron | 15.0% |
| !! | AGAATTTGAGAAAAAATAGA+TGG | - | chr3.3:75475827-75475846 | None:intergenic | 20.0% |
| !! | CGAAAAATTATTATCAATGT+CGG | + | chr3.3:75476041-75476060 | MS.gene013671:intron | 20.0% |
| !!! | ATGAATGTTATTGATAATTG+TGG | + | chr3.3:75476641-75476660 | MS.gene013671:intron | 20.0% |
| !!! | TCTCTTATTTTTTTTCTTGT+TGG | + | chr3.3:75477460-75477479 | MS.gene013671:intron | 20.0% |
| !!! | TGAATGTTATTGATAATTGT+GGG | + | chr3.3:75476642-75476661 | MS.gene013671:intron | 20.0% |
| !!! | TTGACTTTTTGTTTTTCTAA+GGG | + | chr3.3:75477839-75477858 | MS.gene013671:intron | 20.0% |
| ! | ATTGCAATTATTATCGGAAA+TGG | + | chr3.3:75477232-75477251 | MS.gene013671:intron | 25.0% |
| ! | CAAATAACAATCTAAATGGA+AGG | - | chr3.3:75475888-75475907 | None:intergenic | 25.0% |
| ! | CTTAGAAAAACAAAAAGTCA+AGG | - | chr3.3:75477840-75477859 | None:intergenic | 25.0% |
| ! | CTTTCATTCAACAAATTCAT+AGG | - | chr3.3:75477923-75477942 | None:intergenic | 25.0% |
| ! | TATGCTTTGATTACATAACA+CGG | + | chr3.3:75476287-75476306 | MS.gene013671:intron | 25.0% |
| ! | TGATATTACTGTGATATTAC+AGG | + | chr3.3:75478105-75478124 | MS.gene013671:intron | 25.0% |
| !! | AACTTCAATCTTAAAGCATT+TGG | - | chr3.3:75477403-75477422 | None:intergenic | 25.0% |
| !! | GAATTTGAAGTATGATTCTA+TGG | + | chr3.3:75477585-75477604 | MS.gene013671:intron | 25.0% |
| !! | TCTTATATTCCTTTGTTTCA+GGG | + | chr3.3:75476466-75476485 | MS.gene013671:intron | 25.0% |
| !! | TTCTTATATTCCTTTGTTTC+AGG | + | chr3.3:75476465-75476484 | MS.gene013671:intron | 25.0% |
| !! | TTGTAGAAAAGTACATGAAA+GGG | + | chr3.3:75477999-75478018 | MS.gene013671:CDS | 25.0% |
| !! | TTTGGTTTAAAAAAAAGAGC+AGG | - | chr3.3:75477276-75477295 | None:intergenic | 25.0% |
| !!! | AATATTGGCATACTAGTTTT+TGG | + | chr3.3:75476380-75476399 | MS.gene013671:intron | 25.0% |
| !!! | ATTTTGTTTAACATACATCG+TGG | - | chr3.3:75477758-75477777 | None:intergenic | 25.0% |
| !!! | CTATGAATTTGTTGAATGAA+AGG | + | chr3.3:75477921-75477940 | MS.gene013671:CDS | 25.0% |
| !!! | CTTGACTTTTTGTTTTTCTA+AGG | + | chr3.3:75477838-75477857 | MS.gene013671:intron | 25.0% |
| !!! | CTTTTGATTACATGTTGAAA+GGG | + | chr3.3:75478185-75478204 | MS.gene013671:CDS | 25.0% |
| !!! | TGATGTTTGATTTTTATACG+AGG | + | chr3.3:75477615-75477634 | MS.gene013671:intron | 25.0% |
| !!! | TTTTGATTACATGTTGAAAG+GGG | + | chr3.3:75478186-75478205 | MS.gene013671:CDS | 25.0% |
| !!! | TTTTTGTTTTTCTAAGGGTT+GGG | + | chr3.3:75477844-75477863 | MS.gene013671:intron | 25.0% |
| AAAAGAGCAGGAGTTAATAA+TGG | - | chr3.3:75477264-75477283 | None:intergenic | 30.0% | |
| AAGTAGTATGATATGAAGCA+CGG | - | chr3.3:75476094-75476113 | None:intergenic | 30.0% | |
| AGAATACAAACTTTGTCAAG+AGG | - | chr3.3:75476966-75476985 | None:intergenic | 30.0% | |
| ATCAGATGTATCATACGAAT+GGG | + | chr3.3:75478214-75478233 | MS.gene013671:CDS | 30.0% | |
| CAGTCAAGATTCTCTATTAA+GGG | + | chr3.3:75476849-75476868 | MS.gene013671:CDS | 30.0% | |
| GAATTAGGAAAACATAGACT+CGG | - | chr3.3:75477053-75477072 | None:intergenic | 30.0% | |
| GCATTGTACCTAATTCATAT+CGG | - | chr3.3:75477367-75477386 | None:intergenic | 30.0% | |
| TCAGTCAAGATTCTCTATTA+AGG | + | chr3.3:75476848-75476867 | MS.gene013671:CDS | 30.0% | |
| TGCATTGCAGTGATTTAATA+TGG | + | chr3.3:75476440-75476459 | MS.gene013671:intron | 30.0% | |
| TTGAATGAAAGGACTCTTAA+GGG | + | chr3.3:75477932-75477951 | MS.gene013671:CDS | 30.0% | |
| ! | ATGTACTTTTCTACAACCTT+AGG | - | chr3.3:75477995-75478014 | None:intergenic | 30.0% |
| ! | GCTTTGTTAATCTCTGAAAA+TGG | - | chr3.3:75478166-75478185 | None:intergenic | 30.0% |
| ! | GTTGTAGAAAAGTACATGAA+AGG | + | chr3.3:75477998-75478017 | MS.gene013671:CDS | 30.0% |
| ! | TGTAGAAAAGTACATGAAAG+GGG | + | chr3.3:75478000-75478019 | MS.gene013671:CDS | 30.0% |
| ! | TTCAATCTTAAAGCATTTGG+TGG | - | chr3.3:75477400-75477419 | None:intergenic | 30.0% |
| !! | ACTCTTAAGGGTACATTTTA+TGG | + | chr3.3:75477944-75477963 | MS.gene013671:CDS | 30.0% |
| !! | GCTTTTGATTACATGTTGAA+AGG | + | chr3.3:75478184-75478203 | MS.gene013671:CDS | 30.0% |
| !!! | CTTTTTGTTTTTCTAAGGGT+TGG | + | chr3.3:75477843-75477862 | MS.gene013671:intron | 30.0% |
| !!! | TTTCTAGCTTTTGCTTTTTC+AGG | + | chr3.3:75475860-75475879 | MS.gene013671:intron | 30.0% |
| !!! | TTTTGTTTTTCTAAGGGTTG+GGG | + | chr3.3:75477845-75477864 | MS.gene013671:intron | 30.0% |
| AAAGATAGCAACAGATGAAC+CGG | - | chr3.3:75477135-75477154 | None:intergenic | 35.0% | |
| AAAGTTTGTATTCTCAGCTG+TGG | + | chr3.3:75476972-75476991 | MS.gene013671:CDS | 35.0% | |
| AATGTTGCTAAACCAAAACC+CGG | + | chr3.3:75477113-75477132 | MS.gene013671:CDS | 35.0% | |
| ACAGGTTTGTCATGATCTTT+CGG | - | chr3.3:75477521-75477540 | None:intergenic | 35.0% | |
| AGTAAACATCAGTGTGACAA+AGG | - | chr3.3:75476252-75476271 | None:intergenic | 35.0% | |
| ATTTGCTTCCATGCTTCTAT+AGG | + | chr3.3:75477074-75477093 | MS.gene013671:intron | 35.0% | |
| CAGAAAATGCATAGAAATCG+TGG | - | chr3.3:75477561-75477580 | None:intergenic | 35.0% | |
| CATCAGATGTATCATACGAA+TGG | + | chr3.3:75478213-75478232 | MS.gene013671:CDS | 35.0% | |
| CATTCGTATGATACATCTGA+TGG | - | chr3.3:75478215-75478234 | None:intergenic | 35.0% | |
| CCAAATATACGAGGAAACAA+TGG | - | chr3.3:75476499-75476518 | None:intergenic | 35.0% | |
| CCATTGTTTCCTCGTATATT+TGG | + | chr3.3:75476496-75476515 | MS.gene013671:CDS | 35.0% | |
| GAAGTATGTTAGTGCTTCAT+AGG | - | chr3.3:75475964-75475983 | None:intergenic | 35.0% | |
| GCACTAACATACTTCAGATT+AGG | + | chr3.3:75475969-75475988 | MS.gene013671:intron | 35.0% | |
| GCATGGAAGCAAATTGAATT+AGG | - | chr3.3:75477068-75477087 | None:intergenic | 35.0% | |
| GTAAACATCAGTGTGACAAA+GGG | - | chr3.3:75476251-75476270 | None:intergenic | 35.0% | |
| GTAATTGCTGAAATGACCAA+CGG | + | chr3.3:75477666-75477685 | MS.gene013671:CDS | 35.0% | |
| GTTGAATGAAAGGACTCTTA+AGG | + | chr3.3:75477931-75477950 | MS.gene013671:CDS | 35.0% | |
| TACTGTGATATTACAGGAAC+TGG | + | chr3.3:75478111-75478130 | MS.gene013671:intron | 35.0% | |
| TCAATGAAATCATATGCGTC+AGG | - | chr3.3:75476008-75476027 | None:intergenic | 35.0% | |
| TCACACTGATGTTTACTTCT+GGG | + | chr3.3:75476255-75476274 | MS.gene013671:CDS | 35.0% | |
| TCAGATGTATCATACGAATG+GGG | + | chr3.3:75478215-75478234 | MS.gene013671:CDS | 35.0% | |
| TGAAATGCATCGTCTTTGTT+TGG | - | chr3.3:75477893-75477912 | None:intergenic | 35.0% | |
| TGATCTTCTTAGGATCAACA+CGG | + | chr3.3:75476800-75476819 | MS.gene013671:CDS | 35.0% | |
| TGGTTCCAAAACACAATCAA+GGG | - | chr3.3:75476128-75476147 | None:intergenic | 35.0% | |
| ! | TGAATCCCTTGATTGTGTTT+TGG | + | chr3.3:75476120-75476139 | MS.gene013671:intron | 35.0% |
| !! | GGTTCTGTTTGTTTTCTTCA+AGG | + | chr3.3:75476401-75476420 | MS.gene013671:intron | 35.0% |
| !! | GTTGAACTAACTTGTTGAAC+AGG | - | chr3.3:75477539-75477558 | None:intergenic | 35.0% |
| !! | GTTGATTTTTGCAACACATC+CGG | - | chr3.3:75476934-75476953 | None:intergenic | 35.0% |
| !! | TCTTTTTAGCAACAAGCAAG+AGG | - | chr3.3:75477787-75477806 | None:intergenic | 35.0% |
| AAGATAGCAACAGATGAACC+GGG | - | chr3.3:75477134-75477153 | None:intergenic | 40.0% | |
| ACCAAAATTTAGGCTGCTGA+AGG | + | chr3.3:75477290-75477309 | MS.gene013671:intron | 40.0% | |
| ATATTTGGTCATGAAGCTGG+AGG | + | chr3.3:75476511-75476530 | MS.gene013671:CDS | 40.0% | |
| CAAAATTTAGGCTGCTGAAG+GGG | + | chr3.3:75477292-75477311 | MS.gene013671:intron | 40.0% | |
| CAGATGTATCATACGAATGG+GGG | + | chr3.3:75478216-75478235 | MS.gene013671:CDS | 40.0% | |
| CAGGTTTGTCATGATCTTTC+GGG | - | chr3.3:75477520-75477539 | None:intergenic | 40.0% | |
| CCAAAATTTAGGCTGCTGAA+GGG | + | chr3.3:75477291-75477310 | MS.gene013671:intron | 40.0% | |
| CGTATATTTGGTCATGAAGC+TGG | + | chr3.3:75476508-75476527 | MS.gene013671:CDS | 40.0% | |
| CTGGTTCCAAAACACAATCA+AGG | - | chr3.3:75476129-75476148 | None:intergenic | 40.0% | |
| CTTTGATTACATAACACGGC+GGG | + | chr3.3:75476291-75476310 | MS.gene013671:intron | 40.0% | |
| GATATTACAGGAACTGGAAC+TGG | + | chr3.3:75478117-75478136 | MS.gene013671:intron | 40.0% | |
| GCAACATGTGTGATCTTCTT+AGG | + | chr3.3:75476790-75476809 | MS.gene013671:CDS | 40.0% | |
| GCTTCATGACCAAATATACG+AGG | - | chr3.3:75476508-75476527 | None:intergenic | 40.0% | |
| GCTTTGATTACATAACACGG+CGG | + | chr3.3:75476290-75476309 | MS.gene013671:intron | 40.0% | |
| GGAGATTGAGATGTGAACAT+TGG | + | chr3.3:75477636-75477655 | MS.gene013671:intron | 40.0% | |
| GGTTCAGCTTAGCTTAAGTA+AGG | - | chr3.3:75477819-75477838 | None:intergenic | 40.0% | |
| GGTTCATCTGTTGCTATCTT+TGG | + | chr3.3:75477134-75477153 | MS.gene013671:CDS | 40.0% | |
| GTCACACTGATGTTTACTTC+TGG | + | chr3.3:75476254-75476273 | MS.gene013671:CDS | 40.0% | |
| GTTTCCAGCCGATATGAATT+AGG | + | chr3.3:75477356-75477375 | MS.gene013671:CDS | 40.0% | |
| TACAAGAGTAACATACCGCA+AGG | - | chr3.3:75477175-75477194 | None:intergenic | 40.0% | |
| TATTTGGTCATGAAGCTGGA+GGG | + | chr3.3:75476512-75476531 | MS.gene013671:CDS | 40.0% | |
| TCTAATGTCGATCAGGATTG+TGG | + | chr3.3:75476665-75476684 | MS.gene013671:intron | 40.0% | |
| TCTGGTGCATCAAGAATCAT+TGG | + | chr3.3:75477323-75477342 | MS.gene013671:CDS | 40.0% | |
| TCTGTTGCTATCTTTGGACT+TGG | + | chr3.3:75477140-75477159 | MS.gene013671:CDS | 40.0% | |
| TGTACCTAATTCATATCGGC+TGG | - | chr3.3:75477363-75477382 | None:intergenic | 40.0% | |
| TGTTGGCAGCTAAGAAGTTT+GGG | + | chr3.3:75477477-75477496 | MS.gene013671:intron | 40.0% | |
| TTCCATGCTTCTATAGGTCT+TGG | + | chr3.3:75477080-75477099 | MS.gene013671:intron | 40.0% | |
| TTGTTGGCAGCTAAGAAGTT+TGG | + | chr3.3:75477476-75477495 | MS.gene013671:intron | 40.0% | |
| ! | ATGTAGATGTACCGACGAAA+TGG | - | chr3.3:75476887-75476906 | None:intergenic | 40.0% |
| ! | GTGTGACAGATCTAAAACCA+GGG | + | chr3.3:75476703-75476722 | MS.gene013671:CDS | 40.0% |
| ! | TGTGACAGATCTAAAACCAG+GGG | + | chr3.3:75476704-75476723 | MS.gene013671:CDS | 40.0% |
| ! | TGTTTACTTCTGGGAAGCTA+AGG | + | chr3.3:75476264-75476283 | MS.gene013671:CDS | 40.0% |
| !! | AGATGTGAACATTGGTTTGC+AGG | + | chr3.3:75477644-75477663 | MS.gene013671:intron | 40.0% |
| !! | AGGTGAAGAGTATCTTGAGA+CGG | - | chr3.3:75476228-75476247 | None:intergenic | 40.0% |
| AACATCAGTGTGACAAAGGG+AGG | - | chr3.3:75476248-75476267 | None:intergenic | 45.0% | |
| AACATGCGCATACACACTCA+AGG | - | chr3.3:75477198-75477217 | None:intergenic | 45.0% | |
| AACCTTAGGAAGATCAGTGC+GGG | - | chr3.3:75477981-75478000 | None:intergenic | 45.0% | |
| ATCGTGGACACATTCGAATG+CGG | - | chr3.3:75477742-75477761 | None:intergenic | 45.0% | |
| ATCTTTGGACTTGGAGCTGT+TGG | + | chr3.3:75477149-75477168 | MS.gene013671:CDS | 45.0% | |
| ATTGCTGAAATGACCAACGG+AGG | + | chr3.3:75477669-75477688 | MS.gene013671:CDS | 45.0% | |
| CAACCTTAGGAAGATCAGTG+CGG | - | chr3.3:75477982-75478001 | None:intergenic | 45.0% | |
| CACCAAGACCTATAGAAGCA+TGG | - | chr3.3:75477085-75477104 | None:intergenic | 45.0% | |
| CATCGAATCGTGCACAGTTA+CGG | + | chr3.3:75478035-75478054 | MS.gene013671:intron | 45.0% | |
| CTCTCCTCTGACTTACAATG+TGG | - | chr3.3:75476771-75476790 | None:intergenic | 45.0% | |
| CTGTCCACATTGTAAGTCAG+AGG | + | chr3.3:75476764-75476783 | MS.gene013671:CDS | 45.0% | |
| GGTCAGATCATCAAGTGTAG+AGG | + | chr3.3:75475799-75475818 | MS.gene013671:CDS | 45.0% | |
| GTTGGCAGCTAAGAAGTTTG+GGG | + | chr3.3:75477478-75477497 | MS.gene013671:intron | 45.0% | |
| TACATTCAGCGAGTACACTG+TGG | + | chr3.3:75476902-75476921 | MS.gene013671:CDS | 45.0% | |
| TATGAAGCACGGATACACAC+CGG | - | chr3.3:75476083-75476102 | None:intergenic | 45.0% | |
| TCTACTTCTTCCATCACCAG+TGG | - | chr3.3:75476178-75476197 | None:intergenic | 45.0% | |
| TCTTAGGATCAACACGGACA+GGG | + | chr3.3:75476806-75476825 | MS.gene013671:CDS | 45.0% | |
| TTCTTAGGATCAACACGGAC+AGG | + | chr3.3:75476805-75476824 | MS.gene013671:CDS | 45.0% | |
| TTGTGGGTCTAATGTCGATC+AGG | + | chr3.3:75476658-75476677 | MS.gene013671:intron | 45.0% | |
| ! | ACTTTGTCAAGAGGTGCATC+AGG | - | chr3.3:75476957-75476976 | None:intergenic | 45.0% |
| ! | CCCTTCAGCAGCCTAAATTT+TGG | - | chr3.3:75477294-75477313 | None:intergenic | 45.0% |
| ! | CTTTGTCAAGAGGTGCATCA+GGG | - | chr3.3:75476956-75476975 | None:intergenic | 45.0% |
| ! | GATCGTGCTGTTGAATGTAC+CGG | + | chr3.3:75477696-75477715 | MS.gene013671:CDS | 45.0% |
| ! | GGTGTGACAGATCTAAAACC+AGG | + | chr3.3:75476702-75476721 | MS.gene013671:CDS | 45.0% |
| ! | GTACCGACGAAATGGTGAAT+CGG | - | chr3.3:75476879-75476898 | None:intergenic | 45.0% |
| ! | TATCTTGAGACGGACTTCAC+CGG | - | chr3.3:75476218-75476237 | None:intergenic | 45.0% |
| !! | ACTGGTGATGGAAGAAGTAG+AGG | + | chr3.3:75476177-75476196 | MS.gene013671:CDS | 45.0% |
| !!! | TTGTGTTTTGGAACCAGCTG+CGG | + | chr3.3:75476132-75476151 | MS.gene013671:intron | 45.0% |
| ACCTTAGGAAGATCAGTGCG+GGG | - | chr3.3:75477980-75477999 | None:intergenic | 50.0% | |
| ATGCCCTGCCTGTATTCACA+GGG | + | chr3.3:75476730-75476749 | MS.gene013671:CDS | 50.0% | |
| CTCAGCTGTGGAATATGCAC+AGG | + | chr3.3:75476984-75477003 | MS.gene013671:CDS | 50.0% | |
| CTTAGGATCAACACGGACAG+GGG | + | chr3.3:75476807-75476826 | MS.gene013671:CDS | 50.0% | |
| GAGTACACTGTGGTTCATGC+CGG | + | chr3.3:75476912-75476931 | MS.gene013671:CDS | 50.0% | |
| GATACACACCGGACACAACA+TGG | - | chr3.3:75476072-75476091 | None:intergenic | 50.0% | |
| GATCATAGCCTGGATGCTAC+CGG | - | chr3.3:75477718-75477737 | None:intergenic | 50.0% | |
| GATGATCTGACCAGCAGTGT+TGG | - | chr3.3:75475791-75475810 | None:intergenic | 50.0% | |
| GGAGTCTGACCCTGAAACAA+AGG | - | chr3.3:75476478-75476497 | None:intergenic | 50.0% | |
| TGAAATGACCAACGGAGGTG+TGG | + | chr3.3:75477674-75477693 | MS.gene013671:CDS | 50.0% | |
| ! | ATCAGGATTGTGGAGAGCGT+AGG | + | chr3.3:75476675-75476694 | MS.gene013671:intron | 50.0% |
| ! | CAGCCGATTCACCATTTCGT+CGG | + | chr3.3:75476873-75476892 | MS.gene013671:CDS | 50.0% |
| ! | CTGTATTCACAGGGGAGTGT+GGG | + | chr3.3:75476739-75476758 | MS.gene013671:CDS | 50.0% |
| ! | GCAACAGATGAACCGGGTTT+TGG | - | chr3.3:75477128-75477147 | None:intergenic | 50.0% |
| ! | TGAATGTACCGGTAGCATCC+AGG | + | chr3.3:75477707-75477726 | MS.gene013671:CDS | 50.0% |
| ! | TGTATTCACAGGGGAGTGTG+GGG | + | chr3.3:75476740-75476759 | MS.gene013671:CDS | 50.0% |
| !! | GGTGATGGAAGAAGTAGAGG+TGG | + | chr3.3:75476180-75476199 | MS.gene013671:CDS | 50.0% |
| !! | TGGGGTGTTGCTGTACTTGT+TGG | + | chr3.3:75477863-75477882 | MS.gene013671:CDS | 50.0% |
| ACTCCCCTGTGAATACAGGC+AGG | - | chr3.3:75476737-75476756 | None:intergenic | 55.0% | |
| CATGCCCTGCCTGTATTCAC+AGG | + | chr3.3:75476729-75476748 | MS.gene013671:CDS | 55.0% | |
| CCACACTCCCCTGTGAATAC+AGG | - | chr3.3:75476741-75476760 | None:intergenic | 55.0% | |
| CCTGTATTCACAGGGGAGTG+TGG | + | chr3.3:75476738-75476757 | MS.gene013671:CDS | 55.0% | |
| CGAATGCGGAGATCATAGCC+TGG | - | chr3.3:75477728-75477747 | None:intergenic | 55.0% | |
| CGGTGTGTCCATGTTGTGTC+CGG | + | chr3.3:75476061-75476080 | MS.gene013671:intron | 55.0% | |
| CTCCCCTGTGAATACAGGCA+GGG | - | chr3.3:75476736-75476755 | None:intergenic | 55.0% | |
| TGCCCTGCCTGTATTCACAG+GGG | + | chr3.3:75476731-75476750 | MS.gene013671:CDS | 55.0% | |
| TTTAGGCTGCTGAAGGGGCA+AGG | + | chr3.3:75477297-75477316 | MS.gene013671:intron | 55.0% | |
| ! | ACCCCGCACTGATCTTCCTA+AGG | + | chr3.3:75477976-75477995 | MS.gene013671:CDS | 55.0% |
| ! | ATTGTGGAGAGCGTAGGCGA+GGG | + | chr3.3:75476681-75476700 | MS.gene013671:CDS | 55.0% |
| !! | ACTTGGAGCTGTTGGCCTTG+CGG | + | chr3.3:75477157-75477176 | MS.gene013671:CDS | 55.0% |
| AGCACGATCCACACCTCCGT+TGG | - | chr3.3:75477685-75477704 | None:intergenic | 60.0% | |
| GCTGAAGGGGCAAGGATGTC+TGG | + | chr3.3:75477305-75477324 | MS.gene013671:CDS | 60.0% | |
| GGAACCAGCTGCGGTTGCAT+GGG | + | chr3.3:75476141-75476160 | MS.gene013671:intron | 60.0% | |
| TGGAACCAGCTGCGGTTGCA+TGG | + | chr3.3:75476140-75476159 | MS.gene013671:intron | 60.0% | |
| ! | GATTGTGGAGAGCGTAGGCG+AGG | + | chr3.3:75476680-75476699 | MS.gene013671:CDS | 60.0% |
| !! | AGACGGACTTCACCGGCTTG+TGG | - | chr3.3:75476211-75476230 | None:intergenic | 60.0% |
| ACAGGCAGGGCATGATCCCC+TGG | - | chr3.3:75476723-75476742 | None:intergenic | 65.0% | |
| ACCAGCTGCGGTTGCATGGG+AGG | + | chr3.3:75476144-75476163 | MS.gene013671:intron | 65.0% | |
| AGCTGCGGTTGCATGGGAGG+CGG | + | chr3.3:75476147-75476166 | MS.gene013671:intron | 65.0% | |
| !! | CGGACTTCACCGGCTTGTGG+TGG | - | chr3.3:75476208-75476227 | None:intergenic | 65.0% |
| ATGGGAGGCGGGGAAGCCAC+TGG | + | chr3.3:75476159-75476178 | MS.gene013671:CDS | 70.0% | |
| CTGCGGTTGCATGGGAGGCG+GGG | + | chr3.3:75476149-75476168 | MS.gene013671:CDS | 70.0% | |
| GAGGTGGCGCCACCACAAGC+CGG | + | chr3.3:75476196-75476215 | MS.gene013671:CDS | 70.0% | |
| GCCTCCCATGCAACCGCAGC+TGG | - | chr3.3:75476148-75476167 | None:intergenic | 70.0% | |
| GCTGCGGTTGCATGGGAGGC+GGG | + | chr3.3:75476148-75476167 | MS.gene013671:intron | 70.0% | |
| GGCGGGGAAGCCACTGGTGA+TGG | + | chr3.3:75476165-75476184 | MS.gene013671:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 75475784 | 75478243 | 75475784 | ID=MS.gene013671 |
| chr3.3 | mRNA | 75475784 | 75478243 | 75475784 | ID=MS.gene013671.t1;Parent=MS.gene013671 |
| chr3.3 | exon | 75475784 | 75475820 | 75475784 | ID=MS.gene013671.t1.exon1;Parent=MS.gene013671.t1 |
| chr3.3 | CDS | 75475784 | 75475820 | 75475784 | ID=cds.MS.gene013671.t1;Parent=MS.gene013671.t1 |
| chr3.3 | exon | 75476149 | 75476285 | 75476149 | ID=MS.gene013671.t1.exon2;Parent=MS.gene013671.t1 |
| chr3.3 | CDS | 75476149 | 75476285 | 75476149 | ID=cds.MS.gene013671.t1;Parent=MS.gene013671.t1 |
| chr3.3 | exon | 75476487 | 75476533 | 75476487 | ID=MS.gene013671.t1.exon3;Parent=MS.gene013671.t1 |
| chr3.3 | CDS | 75476487 | 75476533 | 75476487 | ID=cds.MS.gene013671.t1;Parent=MS.gene013671.t1 |
| chr3.3 | exon | 75476680 | 75477005 | 75476680 | ID=MS.gene013671.t1.exon4;Parent=MS.gene013671.t1 |
| chr3.3 | CDS | 75476680 | 75477005 | 75476680 | ID=cds.MS.gene013671.t1;Parent=MS.gene013671.t1 |
| chr3.3 | exon | 75477096 | 75477178 | 75477096 | ID=MS.gene013671.t1.exon5;Parent=MS.gene013671.t1 |
| chr3.3 | CDS | 75477096 | 75477178 | 75477096 | ID=cds.MS.gene013671.t1;Parent=MS.gene013671.t1 |
| chr3.3 | exon | 75477302 | 75477377 | 75477302 | ID=MS.gene013671.t1.exon6;Parent=MS.gene013671.t1 |
| chr3.3 | CDS | 75477302 | 75477377 | 75477302 | ID=cds.MS.gene013671.t1;Parent=MS.gene013671.t1 |
| chr3.3 | exon | 75477486 | 75477547 | 75477486 | ID=MS.gene013671.t1.exon7;Parent=MS.gene013671.t1 |
| chr3.3 | CDS | 75477486 | 75477547 | 75477486 | ID=cds.MS.gene013671.t1;Parent=MS.gene013671.t1 |
| chr3.3 | exon | 75477666 | 75477761 | 75477666 | ID=MS.gene013671.t1.exon8;Parent=MS.gene013671.t1 |
| chr3.3 | CDS | 75477666 | 75477761 | 75477666 | ID=cds.MS.gene013671.t1;Parent=MS.gene013671.t1 |
| chr3.3 | exon | 75477860 | 75478021 | 75477860 | ID=MS.gene013671.t1.exon9;Parent=MS.gene013671.t1 |
| chr3.3 | CDS | 75477860 | 75478021 | 75477860 | ID=cds.MS.gene013671.t1;Parent=MS.gene013671.t1 |
| chr3.3 | exon | 75478127 | 75478243 | 75478127 | ID=MS.gene013671.t1.exon10;Parent=MS.gene013671.t1 |
| chr3.3 | CDS | 75478127 | 75478243 | 75478127 | ID=cds.MS.gene013671.t1;Parent=MS.gene013671.t1 |
| Gene Sequence |
| Protein sequence |
