Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000485.t1 | XP_003623318.1 | 96 | 604 | 24 | 0 | 1 | 604 | 1 | 604 | 0.00E+00 | 1182.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000485.t1 | Q9FFT4 | 82.4 | 607 | 103 | 2 | 1 | 604 | 1 | 606 | 3.6e-300 | 1031.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000485.t1 | G7KSB5 | 96.0 | 604 | 24 | 0 | 1 | 604 | 1 | 604 | 0.0e+00 | 1182.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81954 | MS.gene000485 | PPI |
| MS.gene064505 | MS.gene000485 | PPI |
| MS.gene81957 | MS.gene000485 | PPI |
| MS.gene26127 | MS.gene000485 | PPI |
| MS.gene33522 | MS.gene000485 | PPI |
| MS.gene81956 | MS.gene000485 | PPI |
| MS.gene02488 | MS.gene000485 | PPI |
| MS.gene013678 | MS.gene000485 | PPI |
| MS.gene013671 | MS.gene000485 | PPI |
| MS.gene000485 | MS.gene017382 | PPI |
| MS.gene02655 | MS.gene000485 | PPI |
| MS.gene02654 | MS.gene000485 | PPI |
| MS.gene000485 | MS.gene02651 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000485.t1 | MTR_7g069540 | 96.026 | 604 | 24 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1187 |
| MS.gene000485.t1 | MTR_4g017200 | 84.349 | 607 | 91 | 3 | 1 | 604 | 1 | 606 | 0.0 | 1051 |
| MS.gene000485.t1 | MTR_5g046610 | 84.020 | 607 | 93 | 3 | 1 | 604 | 1 | 606 | 0.0 | 1048 |
| MS.gene000485.t1 | MTR_7g069500 | 85.265 | 604 | 59 | 4 | 1 | 604 | 1 | 574 | 0.0 | 1044 |
| MS.gene000485.t1 | MTR_2g015560 | 80.177 | 565 | 112 | 0 | 40 | 604 | 17 | 581 | 0.0 | 961 |
| MS.gene000485.t1 | MTR_2g009330 | 68.063 | 573 | 183 | 0 | 30 | 602 | 37 | 609 | 0.0 | 862 |
| MS.gene000485.t1 | MTR_5g046620 | 50.207 | 241 | 43 | 5 | 235 | 474 | 1 | 165 | 6.26e-64 | 207 |
| MS.gene000485.t1 | MTR_3g099190 | 24.182 | 550 | 355 | 21 | 20 | 533 | 47 | 570 | 1.77e-20 | 96.3 |
| MS.gene000485.t1 | MTR_2g013120 | 22.612 | 513 | 343 | 15 | 49 | 533 | 88 | 574 | 5.51e-18 | 88.2 |
| MS.gene000485.t1 | MTR_1g011530 | 59.649 | 57 | 20 | 1 | 351 | 407 | 31 | 84 | 3.45e-17 | 77.8 |
| MS.gene000485.t1 | MTR_2g027220 | 21.402 | 542 | 387 | 16 | 13 | 533 | 31 | 554 | 6.83e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000485.t1 | AT5G54960 | 82.372 | 607 | 103 | 2 | 1 | 604 | 1 | 606 | 0.0 | 1049 |
| MS.gene000485.t1 | AT4G33070 | 82.043 | 607 | 105 | 2 | 1 | 604 | 1 | 606 | 0.0 | 1042 |
| MS.gene000485.t1 | AT5G01320 | 81.291 | 604 | 111 | 2 | 1 | 604 | 1 | 602 | 0.0 | 1036 |
| MS.gene000485.t1 | AT5G01330 | 83.304 | 569 | 95 | 0 | 36 | 604 | 23 | 591 | 0.0 | 1007 |
| MS.gene000485.t1 | AT5G17380 | 23.896 | 498 | 315 | 15 | 49 | 511 | 18 | 486 | 2.65e-18 | 89.0 |
| MS.gene000485.t1 | AT3G48560 | 22.989 | 522 | 330 | 19 | 49 | 533 | 103 | 589 | 4.33e-15 | 79.3 |
Find 155 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATTTCATTGGAACTTAT+TGG | 0.122987 | 7.3:-35662991 | MS.gene000485:CDS |
| TCAAACCGTTACTTGCTTTC+AGG | 0.174097 | 7.3:-35669072 | MS.gene000485:intron |
| CTGAAGTATTACTGAGGATT+TGG | 0.201502 | 7.3:+35661804 | None:intergenic |
| CCATTTCATTGGAACTTATT+GGG | 0.218907 | 7.3:-35662990 | MS.gene000485:CDS |
| TTAACTCTCAAAGGTTCTTT+TGG | 0.268831 | 7.3:+35662674 | None:intergenic |
| CCCAATAAGTTCCAATGAAA+TGG | 0.289567 | 7.3:+35662990 | None:intergenic |
| TGAAGTATTACTGAGGATTT+GGG | 0.289917 | 7.3:+35661805 | None:intergenic |
| TGTATCCGCCATTATTTATC+AGG | 0.290602 | 7.3:+35662195 | None:intergenic |
| CCTCAGGCAATTTCAACTTT+TGG | 0.294722 | 7.3:+35662570 | None:intergenic |
| AAAATGGACACAATGTTATT+AGG | 0.318529 | 7.3:-35669578 | MS.gene000485:CDS |
| CAACCGATTACATTAAGTTT+TGG | 0.318903 | 7.3:+35669338 | None:intergenic |
| CTTCCATAATCATTGGAGTT+AGG | 0.319203 | 7.3:+35669155 | None:intergenic |
| GACTTCAAAGGTTTCCCATT+TGG | 0.322846 | 7.3:+35662701 | None:intergenic |
| GGACCTAACTCCAATGATTA+TGG | 0.329425 | 7.3:-35669158 | MS.gene000485:CDS |
| GCTGATGCATACTTGTTTGC+TGG | 0.330059 | 7.3:-35662926 | MS.gene000485:CDS |
| CATAGGATATTTGTTCCAAA+TGG | 0.336215 | 7.3:-35662716 | MS.gene000485:CDS |
| CAAATGCAATATGGCTCAAT+TGG | 0.339341 | 7.3:-35662448 | MS.gene000485:CDS |
| ATCATCTTCCTGATAAATAA+TGG | 0.361652 | 7.3:-35662203 | MS.gene000485:CDS |
| CCTGTTACTTCCATAATCAT+TGG | 0.361965 | 7.3:+35669148 | None:intergenic |
| ATGAAATGGGGATGGTGCTC+AGG | 0.369145 | 7.3:+35663004 | None:intergenic |
| GATCGGGTTGTGATTCCTAA+TGG | 0.370589 | 7.3:-35662827 | MS.gene000485:CDS |
| CAGCTAATGCTTATGTAAAC+AGG | 0.372535 | 7.3:+35663579 | None:intergenic |
| ATTCCTAATGGACCTTCATT+TGG | 0.374927 | 7.3:-35662815 | MS.gene000485:CDS |
| ATCTGATGCCTTTGTCGAAC+TGG | 0.388724 | 7.3:-35663080 | MS.gene000485:CDS |
| CAGTTCTTGATAACATTGTA+TGG | 0.391023 | 7.3:+35662146 | None:intergenic |
| CCAATAAGTTCCAATGAAAT+GGG | 0.391316 | 7.3:+35662991 | None:intergenic |
| CATCCAAATGAAGGTCCATT+AGG | 0.391659 | 7.3:+35662812 | None:intergenic |
| TTGCCGCTTATTTGTATTGT+TGG | 0.393601 | 7.3:-35669182 | MS.gene000485:CDS |
| CTTCAACTCTTGGCTGAAAT+CGG | 0.394398 | 7.3:+35669100 | None:intergenic |
| GAGCACCATCCCCATTTCAT+TGG | 0.394834 | 7.3:-35663001 | MS.gene000485:CDS |
| TTTGAAAACACTTCAACTCT+TGG | 0.398759 | 7.3:+35669090 | None:intergenic |
| AACGTCGTTGGCCGTTGGCT+TGG | 0.404111 | 7.3:+35669541 | None:intergenic |
| TATGAGTTTCAAATGCAATA+TGG | 0.409320 | 7.3:-35662457 | MS.gene000485:CDS |
| CTGCTGCTTCCAACCCCATC+TGG | 0.410581 | 7.3:+35663182 | None:intergenic |
| GAAGCAATTGCAACAGCAAC+AGG | 0.414187 | 7.3:-35661936 | MS.gene000485:CDS |
| TACTTGGGAGCGCGTGAAAA+CGG | 0.426685 | 7.3:+35663510 | None:intergenic |
| GACGCTTCGCAAGTGCCTTA+AGG | 0.428488 | 7.3:+35662771 | None:intergenic |
| ACAACATTTGTTGTATATGT+TGG | 0.429950 | 7.3:+35662642 | None:intergenic |
| CGATTATTGTTGAGCCCGAT+CGG | 0.432510 | 7.3:-35662844 | MS.gene000485:CDS |
| CCAATGATTATGGAAGTAAC+AGG | 0.436409 | 7.3:-35669148 | MS.gene000485:CDS |
| GAACCAAAACTTAATGTAAT+CGG | 0.446267 | 7.3:-35669341 | MS.gene000485:CDS |
| ACTTGGGAGCGCGTGAAAAC+GGG | 0.449334 | 7.3:+35663511 | None:intergenic |
| CATACAATGTTATCAAGAAC+TGG | 0.450936 | 7.3:-35662145 | MS.gene000485:CDS |
| TGGTTACTTTCACTGTTGGT+GGG | 0.456606 | 7.3:-35669247 | MS.gene000485:CDS |
| GATTATTGTTGAGCCCGATC+GGG | 0.458460 | 7.3:-35662843 | MS.gene000485:CDS |
| AAACATAAGCTATCTTTCTC+TGG | 0.459117 | 7.3:+35661912 | None:intergenic |
| ATTATTTATCAGGAAGATGA+TGG | 0.461795 | 7.3:+35662205 | None:intergenic |
| AAAAGTGGGGTGAGGAATTG+AGG | 0.461915 | 7.3:+35663548 | None:intergenic |
| GTGGCGGCCTAGTGTGGCAT+TGG | 0.463472 | 7.3:+35669454 | None:intergenic |
| CATTGAAGTGATTGTTCACA+AGG | 0.466013 | 7.3:-35661889 | MS.gene000485:CDS |
| GTTGATGAATGATTTCCTTA+AGG | 0.466656 | 7.3:-35662786 | MS.gene000485:CDS |
| TATGCTCGGTCGCGTGGCGT+AGG | 0.472862 | 7.3:-35669278 | MS.gene000485:CDS |
| GACAGGTTCACGACTAAAAG+TGG | 0.473332 | 7.3:+35663533 | None:intergenic |
| ATAGGATATTTGTTCCAAAT+GGG | 0.475146 | 7.3:-35662715 | MS.gene000485:CDS |
| TGGTCTGTTGGTGCAACTCT+TGG | 0.476946 | 7.3:-35662424 | MS.gene000485:CDS |
| GCCTAGTGTGGCATTGGCCG+AGG | 0.477226 | 7.3:+35669460 | None:intergenic |
| CCGTGATGCCATCAGCTAAA+GGG | 0.477384 | 7.3:-35663033 | MS.gene000485:CDS |
| CATTTCATTGGAACTTATTG+GGG | 0.478426 | 7.3:-35662989 | MS.gene000485:CDS |
| GTGGTTACTTTCACTGTTGG+TGG | 0.479303 | 7.3:-35669248 | MS.gene000485:CDS |
| TTAACGACTACAGTTCTGTT+GGG | 0.482833 | 7.3:-35662895 | MS.gene000485:CDS |
| CCGCTTATTTGTATTGTTGG+TGG | 0.484728 | 7.3:-35669179 | MS.gene000485:CDS |
| GAAATAACGTCGTTGGCCGT+TGG | 0.485345 | 7.3:+35669536 | None:intergenic |
| AGTGTTCTTAATGCTATAGC+TGG | 0.489938 | 7.3:-35669221 | MS.gene000485:CDS |
| TTGAAATTGCCTGAGGGATG+TGG | 0.492977 | 7.3:-35662563 | MS.gene000485:CDS |
| TTAGGAATCACAACCCGATC+GGG | 0.494043 | 7.3:+35662830 | None:intergenic |
| TGCATTCTGTGCTGAGATTG+TGG | 0.494314 | 7.3:-35662954 | MS.gene000485:CDS |
| GCCGTGATGCCATCAGCTAA+AGG | 0.496857 | 7.3:-35663034 | MS.gene000485:CDS |
| GGCTCAATTGGATGGTCTGT+TGG | 0.501951 | 7.3:-35662436 | MS.gene000485:CDS |
| GCTATTGGCAGCAGAGACTC+TGG | 0.502262 | 7.3:+35661833 | None:intergenic |
| AGGATTCTTCATCATACCAT+TGG | 0.504484 | 7.3:-35669128 | MS.gene000485:CDS |
| ACAAATGTTGTCTAGTGAAA+CGG | 0.504682 | 7.3:-35662630 | MS.gene000485:CDS |
| TGCAATATGGCTCAATTGGA+TGG | 0.506275 | 7.3:-35662444 | MS.gene000485:CDS |
| TGCTAGGTGGCGGCCTAGTG+TGG | 0.507530 | 7.3:+35669448 | None:intergenic |
| ATTGAGGTTGAAATTCATGA+TGG | 0.507826 | 7.3:-35662170 | MS.gene000485:CDS |
| CACTAGGCCGCCACCTAGCA+CGG | 0.508955 | 7.3:-35669445 | MS.gene000485:CDS |
| TTTAACGACTACAGTTCTGT+TGG | 0.512794 | 7.3:-35662896 | MS.gene000485:CDS |
| TTAGGACCACCTACTAGTAC+AGG | 0.512847 | 7.3:+35663121 | None:intergenic |
| TGTGTGGTTACTTTCACTGT+TGG | 0.515269 | 7.3:-35669251 | MS.gene000485:CDS |
| TGTTGTAACGAGCTCAATGC+TGG | 0.516769 | 7.3:-35669317 | MS.gene000485:CDS |
| CATTTGGAACAAATATCCTA+TGG | 0.518266 | 7.3:+35662717 | None:intergenic |
| CTTGAACTAGCCTCCGTGCT+AGG | 0.520163 | 7.3:+35669432 | None:intergenic |
| AACATAACATTAACTCTCAA+AGG | 0.524430 | 7.3:+35662665 | None:intergenic |
| TTGTAGATTGACTAACCAGA+TGG | 0.530616 | 7.3:-35663197 | MS.gene000485:intron |
| CTAGCCTCCGTGCTAGGTGG+CGG | 0.532869 | 7.3:+35669438 | None:intergenic |
| AAGCGAATAATTGCTTGCAT+TGG | 0.533361 | 7.3:-35662379 | MS.gene000485:CDS |
| AAGCAAAGAGTTGCTTGAGT+GGG | 0.534030 | 7.3:-35661859 | MS.gene000485:CDS |
| ACGGTTGTGATTGCTGAGAC+GGG | 0.535250 | 7.3:-35662611 | MS.gene000485:CDS |
| AGCGCTTACCCACATCCCTC+AGG | 0.540837 | 7.3:+35662554 | None:intergenic |
| AAAGTGGGGTGAGGAATTGA+GGG | 0.544961 | 7.3:+35663549 | None:intergenic |
| ATCAACACACATCCAAATGA+AGG | 0.547911 | 7.3:+35662803 | None:intergenic |
| GGTTGTGATTGCTGAGACGG+GGG | 0.553648 | 7.3:-35662609 | MS.gene000485:CDS |
| TGTGCATGAAATAACGTCGT+TGG | 0.558295 | 7.3:+35669529 | None:intergenic |
| GCAGTGAAGCCTGTACTAGT+AGG | 0.561087 | 7.3:-35663130 | MS.gene000485:CDS |
| ATTAGGAATCACAACCCGAT+CGG | 0.563366 | 7.3:+35662829 | None:intergenic |
| ATAATTGCTTGCATTGGTGA+TGG | 0.566797 | 7.3:-35662373 | MS.gene000485:CDS |
| GTCACCGACGGTGATTTCCT+CGG | 0.567117 | 7.3:-35669477 | MS.gene000485:CDS |
| TGTAGATTGACTAACCAGAT+GGG | 0.567208 | 7.3:-35663196 | MS.gene000485:intron |
| TCCTCGGCCAATGCCACACT+AGG | 0.568177 | 7.3:-35669461 | MS.gene000485:CDS |
| TGAAATGGGGATGGTGCTCA+GGG | 0.568384 | 7.3:+35663005 | None:intergenic |
| AACGGTTGTGATTGCTGAGA+CGG | 0.568757 | 7.3:-35662612 | MS.gene000485:CDS |
| CAAGCAAAGAGTTGCTTGAG+TGG | 0.571229 | 7.3:-35661860 | MS.gene000485:CDS |
| ATTGACTAACCAGATGGGGT+TGG | 0.572238 | 7.3:-35663191 | MS.gene000485:CDS |
| GGGACCATCCCTTTAGCTGA+TGG | 0.572399 | 7.3:+35663025 | None:intergenic |
| GATGCAATTCACAACGGTGA+AGG | 0.573496 | 7.3:-35662104 | MS.gene000485:CDS |
| GGAGCGCGTGAAAACGGGAC+AGG | 0.574468 | 7.3:+35663516 | None:intergenic |
| CCCTTTAGCTGATGGCATCA+CGG | 0.575591 | 7.3:+35663033 | None:intergenic |
| ACAACGGTGAAGGAAAATGT+TGG | 0.577339 | 7.3:-35662094 | MS.gene000485:CDS |
| GAGGTTGAAGTCACCAGGAA+CGG | 0.578670 | 7.3:+35669388 | None:intergenic |
| CGCATCTGCCAGTTCGACAA+AGG | 0.582374 | 7.3:+35663072 | None:intergenic |
| AGCGTGAGGTTGAAGTCACC+AGG | 0.585897 | 7.3:+35669383 | None:intergenic |
| ATAGGCTGTGGTGAATCACT+TGG | 0.585973 | 7.3:-35663658 | MS.gene000485:intron |
| ATCAAGAACTGGAATTACAC+TGG | 0.587582 | 7.3:-35662134 | MS.gene000485:CDS |
| GATGGTTATGCTCGGTCGCG+TGG | 0.588769 | 7.3:-35669284 | MS.gene000485:CDS |
| TTGCATATGAAAATTACCAT+AGG | 0.592094 | 7.3:-35662733 | MS.gene000485:CDS |
| AATGCTGGTTACGCAGCAGA+TGG | 0.598495 | 7.3:-35669302 | MS.gene000485:CDS |
| AGCTATACAGCGGTCACCGA+CGG | 0.600396 | 7.3:-35669489 | MS.gene000485:CDS |
| AGCAAAGAGTTGCTTGAGTG+GGG | 0.601698 | 7.3:-35661858 | MS.gene000485:CDS |
| CGGTTGTGATTGCTGAGACG+GGG | 0.606636 | 7.3:-35662610 | MS.gene000485:CDS |
| GTCGAACTGGCAGATGCGAG+TGG | 0.610851 | 7.3:-35663067 | MS.gene000485:CDS |
| GCTGAAATCGGATATTCCAA+TGG | 0.613643 | 7.3:+35669112 | None:intergenic |
| AGGAAAATGTTGGACTACCA+AGG | 0.615414 | 7.3:-35662084 | MS.gene000485:intron |
| GAAGTATTACTGAGGATTTG+GGG | 0.618194 | 7.3:+35661806 | None:intergenic |
| AAGTTCCAATGAAATGGGGA+TGG | 0.619469 | 7.3:+35662996 | None:intergenic |
| TAATGGCGGATACACAATTG+AGG | 0.619516 | 7.3:-35662186 | MS.gene000485:CDS |
| GGGGTTGGAAGCAGCAGTTG+AGG | 0.620039 | 7.3:-35663176 | MS.gene000485:CDS |
| ACAGGTTCACGACTAAAAGT+GGG | 0.620615 | 7.3:+35663534 | None:intergenic |
| CCAAAAGTTGAAATTGCCTG+AGG | 0.627567 | 7.3:-35662570 | MS.gene000485:CDS |
| AGTAGGTGGTCCTAAACTGA+GGG | 0.628023 | 7.3:-35663113 | MS.gene000485:CDS |
| GCACGGAGGCTAGTTCAAGT+TGG | 0.635115 | 7.3:-35669428 | MS.gene000485:CDS |
| TTTATTGATGCAATTCACAA+CGG | 0.637365 | 7.3:-35662110 | MS.gene000485:CDS |
| TCACGACTAAAAGTGGGGTG+AGG | 0.639430 | 7.3:+35663540 | None:intergenic |
| ACGCAGCAGATGGTTATGCT+CGG | 0.642962 | 7.3:-35669292 | MS.gene000485:CDS |
| GCGTGGCGTAGGAGCTTGTG+TGG | 0.647933 | 7.3:-35669267 | MS.gene000485:CDS |
| TTTAGACTTAACCAAGCCAA+CGG | 0.649940 | 7.3:-35669552 | MS.gene000485:CDS |
| TAGTAGGTGGTCCTAAACTG+AGG | 0.652385 | 7.3:-35663114 | MS.gene000485:CDS |
| GTAGATTGACTAACCAGATG+GGG | 0.652566 | 7.3:-35663195 | MS.gene000485:intron |
| TGAAATTGCCTGAGGGATGT+GGG | 0.655016 | 7.3:-35662562 | MS.gene000485:intron |
| GAACTAGCCTCCGTGCTAGG+TGG | 0.656560 | 7.3:+35669435 | None:intergenic |
| AGGTGGTCCTAAACTGAGGG+TGG | 0.656562 | 7.3:-35663110 | MS.gene000485:CDS |
| AAGTATTACTGAGGATTTGG+GGG | 0.657168 | 7.3:+35661807 | None:intergenic |
| TGTATAGCTGTTGTACTGTG+TGG | 0.659057 | 7.3:+35669503 | None:intergenic |
| GATGCCATCAGCTAAAGGGA+TGG | 0.659243 | 7.3:-35663029 | MS.gene000485:CDS |
| CAATAAGTTCCAATGAAATG+GGG | 0.661557 | 7.3:+35662992 | None:intergenic |
| CCACCAACAATACAAATAAG+CGG | 0.661697 | 7.3:+35669179 | None:intergenic |
| GTGAAGCCTGTACTAGTAGG+TGG | 0.664654 | 7.3:-35663127 | MS.gene000485:CDS |
| ACCAACCTGAAAGCAAGTAA+CGG | 0.670459 | 7.3:+35669067 | None:intergenic |
| ATCTTCCTGATAAATAATGG+CGG | 0.670648 | 7.3:-35662200 | MS.gene000485:CDS |
| CAAAAGTTGAAATTGCCTGA+GGG | 0.678314 | 7.3:-35662569 | MS.gene000485:CDS |
| ACCAGGAACGGAGAAAATGT+CGG | 0.679198 | 7.3:+35669400 | None:intergenic |
| ATATCAACAATGCTGCGATG+TGG | 0.681337 | 7.3:-35662236 | MS.gene000485:CDS |
| TTGGCCGAGGAAATCACCGT+CGG | 0.689959 | 7.3:+35669473 | None:intergenic |
| TGAGGTGGTCGAATAGCGTG+AGG | 0.690804 | 7.3:+35669369 | None:intergenic |
| TAGGCCGCCACCTAGCACGG+AGG | 0.717710 | 7.3:-35669442 | MS.gene000485:CDS |
| CAGGTTCACGACTAAAAGTG+GGG | 0.719162 | 7.3:+35663535 | None:intergenic |
| ACAGTACAACAGCTATACAG+CGG | 0.762540 | 7.3:-35669499 | MS.gene000485:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 35661816 | 35669597 | 35661816 | ID=MS.gene000485 |
| chr7.3 | mRNA | 35661816 | 35669597 | 35661816 | ID=MS.gene000485.t1;Parent=MS.gene000485 |
| chr7.3 | exon | 35669073 | 35669597 | 35669073 | ID=MS.gene000485.t1.exon1;Parent=MS.gene000485.t1 |
| chr7.3 | CDS | 35669073 | 35669597 | 35669073 | ID=cds.MS.gene000485.t1;Parent=MS.gene000485.t1 |
| chr7.3 | exon | 35663513 | 35663676 | 35663513 | ID=MS.gene000485.t1.exon2;Parent=MS.gene000485.t1 |
| chr7.3 | CDS | 35663513 | 35663676 | 35663513 | ID=cds.MS.gene000485.t1;Parent=MS.gene000485.t1 |
| chr7.3 | exon | 35662563 | 35663213 | 35662563 | ID=MS.gene000485.t1.exon3;Parent=MS.gene000485.t1 |
| chr7.3 | CDS | 35662563 | 35663213 | 35662563 | ID=cds.MS.gene000485.t1;Parent=MS.gene000485.t1 |
| chr7.3 | exon | 35662363 | 35662480 | 35662363 | ID=MS.gene000485.t1.exon4;Parent=MS.gene000485.t1 |
| chr7.3 | CDS | 35662363 | 35662480 | 35662363 | ID=cds.MS.gene000485.t1;Parent=MS.gene000485.t1 |
| chr7.3 | exon | 35662085 | 35662273 | 35662085 | ID=MS.gene000485.t1.exon5;Parent=MS.gene000485.t1 |
| chr7.3 | CDS | 35662085 | 35662273 | 35662085 | ID=cds.MS.gene000485.t1;Parent=MS.gene000485.t1 |
| chr7.3 | exon | 35661816 | 35661982 | 35661816 | ID=MS.gene000485.t1.exon6;Parent=MS.gene000485.t1 |
| chr7.3 | CDS | 35661816 | 35661982 | 35661816 | ID=cds.MS.gene000485.t1;Parent=MS.gene000485.t1 |
| Gene Sequence |
| Protein sequence |
