AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90430.t1 MTR_2g063460 96.633 594 10 1 1 594 1 584 0.0 1182
MS.gene90430.t1 MTR_2g063460 96.296 594 10 2 1 594 1 582 0.0 1173
MS.gene90430.t1 MTR_2g032660 42.115 520 227 18 70 544 46 536 5.23e-104 329
MS.gene90430.t1 MTR_4g123630 42.664 518 234 13 70 547 11 505 2.48e-103 326
MS.gene90430.t1 MTR_4g005110 64.783 230 75 2 318 545 337 562 1.04e-95 306
MS.gene90430.t1 MTR_8g088390 50.502 299 116 8 276 548 234 526 4.95e-85 277
MS.gene90430.t1 MTR_8g088390 50.502 299 116 8 276 548 299 591 1.05e-84 278
MS.gene90430.t1 MTR_2g005840 62.842 183 68 0 360 542 237 419 7.32e-83 268
MS.gene90430.t1 MTR_2g005840 62.842 183 68 0 360 542 268 450 2.61e-82 267
MS.gene90430.t1 MTR_7g085500 57.820 211 79 2 357 567 415 615 8.90e-80 265
MS.gene90430.t1 MTR_6g032970 52.033 246 88 5 322 547 336 571 3.32e-77 257
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90430.t1 AT1G79270 44.877 488 207 11 91 568 63 498 6.80e-123 372
MS.gene90430.t1 AT1G79270 44.877 488 207 11 91 568 63 498 6.80e-123 372
MS.gene90430.t1 AT1G79270 44.877 488 207 11 91 568 63 498 6.80e-123 372
MS.gene90430.t1 AT1G79270 44.877 488 207 11 91 568 78 513 7.89e-123 373
MS.gene90430.t1 AT1G48110 39.412 510 246 13 71 546 13 493 1.46e-98 313
MS.gene90430.t1 AT1G48110 39.412 510 246 13 71 546 13 493 1.46e-98 313
MS.gene90430.t1 AT3G13060 54.007 287 107 7 306 573 294 574 1.55e-92 297
MS.gene90430.t1 AT3G13060 54.007 287 107 7 306 573 294 574 1.55e-92 297
MS.gene90430.t1 AT3G13060 57.031 256 88 4 306 545 316 565 2.03e-92 297
MS.gene90430.t1 AT3G13060 57.031 256 88 4 306 545 306 555 2.50e-92 297
MS.gene90430.t1 AT3G17330 40.807 446 213 13 116 547 35 443 7.18e-90 290
MS.gene90430.t1 AT3G17330 40.807 446 213 13 116 547 35 443 7.18e-90 290
MS.gene90430.t1 AT3G17330 57.965 226 92 1 325 547 116 341 8.88e-90 286
MS.gene90430.t1 AT3G13460 51.203 291 115 6 287 557 338 621 1.21e-89 291
MS.gene90430.t1 AT3G13460 51.203 291 115 6 287 557 337 620 1.27e-89 291
MS.gene90430.t1 AT3G13460 51.203 291 115 6 287 557 335 618 1.28e-89 291
MS.gene90430.t1 AT1G09810 57.391 230 97 1 317 546 175 403 1.70e-85 274
MS.gene90430.t1 AT1G09810 51.799 278 126 4 273 546 111 384 1.71e-85 274
MS.gene90430.t1 AT1G09810 51.799 278 126 4 273 546 88 361 2.20e-85 273
MS.gene90430.t1 AT1G55500 53.307 257 97 4 303 540 268 520 6.08e-85 275
MS.gene90430.t1 AT1G55500 53.307 257 97 4 303 540 311 563 7.66e-85 276
MS.gene90430.t1 AT5G61020 55.274 237 86 4 322 545 197 426 3.02e-84 272
MS.gene90430.t1 AT5G61020 55.274 237 86 4 322 545 199 428 3.36e-84 272
MS.gene90430.t1 AT3G03950 55.357 224 96 1 322 545 190 409 3.26e-81 262
MS.gene90430.t1 AT3G03950 55.357 224 96 1 322 545 189 408 3.45e-81 261
MS.gene90430.t1 AT3G03950 55.357 224 96 1 322 545 193 412 3.48e-81 262
MS.gene90430.t1 AT1G27960 56.250 224 83 3 322 545 215 423 7.30e-79 257
MS.gene90430.t1 AT1G27960 56.250 224 83 3 322 545 289 497 6.44e-78 256
MS.gene90430.t1 AT5G58190 51.429 245 109 5 328 567 275 514 1.34e-76 253
MS.gene90430.t1 AT5G58190 51.429 245 109 5 328 567 274 513 1.38e-76 253
MS.gene90430.t1 AT1G55500 36.542 509 253 15 87 540 40 533 1.35e-75 251
MS.gene90430.t1 AT1G55500 36.542 509 253 15 87 540 83 576 1.48e-75 252
MS.gene90430.t1 AT1G55500 36.542 509 253 15 87 540 83 576 2.43e-75 251
MS.gene90430.t1 AT3G13060 56.075 214 72 4 306 503 316 523 2.28e-71 239
MS.gene90430.t1 AT3G13460 45.783 166 63 6 287 432 338 496 5.62e-29 121
MS.gene90430.t1 AT3G13060 43.357 143 59 4 306 432 316 452 4.29e-25 108
MS.gene90430.t1 AT1G27960 48.214 112 43 3 322 433 289 385 9.30e-20 92.8
MS.gene90430.t1 AT4G11970 30.357 168 82 5 355 503 44 195 2.19e-13 72.4
MS.gene90430.t1 AT4G11970 30.357 168 82 5 355 503 44 195 2.25e-13 72.4
MS.gene90430.t1 AT4G11970 30.357 168 82 5 355 503 44 195 2.28e-13 72.4
MS.gene90430.t1 AT4G11970 30.357 168 82 5 355 503 44 195 4.95e-13 72.0
MS.gene90430.t1 AT4G11970 30.357 168 82 5 355 503 44 195 4.95e-13 72.0

Find 135 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACTTGTTGCTTTCATATT+AGG 0.139929 2.1:+32921280 None:intergenic
TATTCTGCTGGTAGTTATTA+TGG 0.145347 2.1:-32923041 MS.gene90430:CDS
TCAACAAAAGTATGGATTTC+TGG 0.157531 2.1:-32920700 MS.gene90430:CDS
GAAAAGTGCATGATCATATT+TGG 0.231336 2.1:+32921066 None:intergenic
TTAAACTCTGGAGGTAATTC+TGG 0.231621 2.1:-32921154 MS.gene90430:CDS
GTTACCTTGTTTGCTTGTTT+TGG 0.232110 2.1:+32921652 None:intergenic
GAGGCTCGACAATGCATTTC+AGG 0.241866 2.1:-32920960 MS.gene90430:CDS
CCTGGCTATATTTCACCTTA+TGG 0.275162 2.1:-32921919 MS.gene90430:CDS
GTGTCTCTACTATTTGTTAC+AGG 0.280235 2.1:+32920572 None:intergenic
ATGTTGATCTGTCCTGATTT+TGG 0.281400 2.1:+32921108 None:intergenic
AGTGGATTTCAACAAAAGTA+TGG 0.322061 2.1:-32920708 MS.gene90430:CDS
TCATATTTGGTTGGAAAATC+AGG 0.322709 2.1:+32921079 None:intergenic
CGATCTACCACTCGGTTTAC+TGG 0.323936 2.1:+32921813 None:intergenic
TGTATCGAGAACATCGATAT+TGG 0.347303 2.1:-32920385 MS.gene90430:CDS
ATTTCTGGCAGCAAGATAAA+TGG 0.351407 2.1:-32920685 MS.gene90430:CDS
ATATGCCGTAGCTGAGGATT+TGG 0.367053 2.1:+32920620 None:intergenic
AGGGAATCGTTATAATGAAT+TGG 0.374688 2.1:-32921836 MS.gene90430:CDS
CAGTATCAGGTTTACCCTCC+TGG 0.392158 2.1:-32921970 MS.gene90430:CDS
TTTATAATGTGCCATTTGAC+AGG 0.415396 2.1:+32920650 None:intergenic
TCCGTCTTTCAACAACCAAT+TGG 0.421822 2.1:-32921946 MS.gene90430:CDS
CTCTTGCATGACCTTCTGAC+GGG 0.425352 2.1:+32920341 None:intergenic
ATGTTCTTTACAACCAACTT+AGG 0.426914 2.1:+32919574 None:intergenic
TGGTGTCGATGTCCAGTATC+AGG 0.429764 2.1:-32921983 MS.gene90430:CDS
TAGGTCATGCAAGCAGATAA+TGG 0.430474 2.1:-32922072 MS.gene90430:CDS
TCGAGCCTCTTATTGCCATT+AGG 0.430781 2.1:+32920974 None:intergenic
GCGACGGGAAAAGAACCCTT+TGG 0.439928 2.1:+32921358 None:intergenic
AGATCATGTGTATCATCAAT+AGG 0.445206 2.1:-32923134 MS.gene90430:CDS
TTCACTTTCTCAACCAACTT+AGG 0.446586 2.1:+32919544 None:intergenic
ATGGAGAACAGGACCAGAAA+TGG 0.448479 2.1:+32921393 None:intergenic
AGAGCATCAAGTACGATGTA+TGG 0.449332 2.1:-32921006 MS.gene90430:CDS
CAGGAGGGTAAACCTGATAC+TGG 0.449509 2.1:+32921971 None:intergenic
TGTGGAGTAGCCGAGATGAT+TGG 0.450864 2.1:-32920734 MS.gene90430:CDS
TATTATGGATATTACTATCC+AGG 0.456293 2.1:-32923026 MS.gene90430:intron
GTTGAAGAAACATCTAATAT+TGG 0.457075 2.1:+32921694 None:intergenic
TCATCAATAGGAGATGCTTC+TGG 0.457910 2.1:-32923122 MS.gene90430:CDS
CAGAATGTTGCTTATTCTGC+TGG 0.462148 2.1:-32923053 MS.gene90430:CDS
TATGTTAAGGTTTCTTCAAA+GGG 0.467717 2.1:-32923182 MS.gene90430:intron
TCAATGGTGACACCAAAATC+AGG 0.467791 2.1:-32921120 MS.gene90430:CDS
TTATGTCGGCGCTGATGCTA+TGG 0.468389 2.1:-32922700 MS.gene90430:CDS
TCTCTTGCATGACCTTCTGA+CGG 0.475313 2.1:+32920340 None:intergenic
CAACAACCAATTGGATCCCC+TGG 0.475726 2.1:-32921937 MS.gene90430:CDS
ATTGCATCTGAATGGAGAAC+AGG 0.476903 2.1:+32921382 None:intergenic
CAACATTCTGATCAGTGGAT+TGG 0.479321 2.1:+32923066 None:intergenic
TACCGAAAAGAAAAGGAATA+CGG 0.480275 2.1:+32920898 None:intergenic
CCATAAGGTGAAATATAGCC+AGG 0.480961 2.1:+32921919 None:intergenic
GAGTAGCCAGTCTGATATCC+TGG 0.482425 2.1:+32922030 None:intergenic
CCTAGAACAGTTAATGCAAA+AGG 0.482609 2.1:-32921181 MS.gene90430:CDS
GAATCCCATGAGTATGTTGA+TGG 0.482741 2.1:+32921886 None:intergenic
GGTTGTTGAAAGACGGAACC+AGG 0.487017 2.1:+32921952 None:intergenic
CCTTTGGCATTGCATCTGAA+TGG 0.488787 2.1:+32921374 None:intergenic
TTATGTTAAGGTTTCTTCAA+AGG 0.495686 2.1:-32923183 MS.gene90430:intron
TATGGAGAGCAAGAAAATCA+AGG 0.500681 2.1:-32922726 MS.gene90430:CDS
ACGGATATTTCCCTGTCAAA+TGG 0.501338 2.1:-32920661 MS.gene90430:CDS
TACTTTCCTGTGAACACACC+TGG 0.502118 2.1:-32922003 MS.gene90430:CDS
GATAGCATACCGAAAAGAAA+AGG 0.504322 2.1:+32920891 None:intergenic
TATGTAGAAAACTTTGCGAC+GGG 0.505982 2.1:+32921343 None:intergenic
GCAAAAGGTACTTTAAACTC+TGG 0.507406 2.1:-32921166 MS.gene90430:CDS
TCTGGAGATAAGAGTGTCAA+TGG 0.513122 2.1:-32921136 MS.gene90430:CDS
TACTTCCATCAACATACTCA+TGG 0.517546 2.1:-32921891 MS.gene90430:CDS
CACATGCAAGCTTACCATGT+TGG 0.518787 2.1:+32923354 None:intergenic
TCGCAGAGTCGTACTGGCAG+TGG 0.526655 2.1:-32921781 MS.gene90430:CDS
AGTGCATGATCATATTTGGT+TGG 0.527014 2.1:+32921070 None:intergenic
ATATAGCCAGGGGATCCAAT+TGG 0.527493 2.1:+32921931 None:intergenic
CCCTTGTGCTACATCTTGTG+TGG 0.528879 2.1:+32921855 None:intergenic
GTACACCTAATGGCAATAAG+AGG 0.531549 2.1:-32920979 MS.gene90430:CDS
TCTTATGTCTATCTCATGCC+AGG 0.534138 2.1:-32922048 MS.gene90430:CDS
GATGGAAGTAACTCACCATA+AGG 0.536031 2.1:+32921904 None:intergenic
TCCAATTGGTTGTTGAAAGA+CGG 0.536670 2.1:+32921945 None:intergenic
GTATGGGCGAGTACACCTAA+TGG 0.536841 2.1:-32920989 MS.gene90430:CDS
TCACTTAATGAGCAGAATCA+AGG 0.540048 2.1:-32921205 MS.gene90430:CDS
GAACATGGAGGATCCTAAGT+TGG 0.540134 2.1:-32919557 MS.gene90430:CDS
GAACATGGAGGATCCTAAGT+TGG 0.540134 2.1:-32919587 MS.gene90430:CDS
TCGACACCAGGTGTGTTCAC+AGG 0.547002 2.1:+32921997 None:intergenic
CCAGCCAAAACAAGCAAACA+AGG 0.547719 2.1:-32921656 MS.gene90430:intron
CCATTCAGATGCAATGCCAA+AGG 0.548568 2.1:-32921374 MS.gene90430:CDS
CATTCAGATGCAATGCCAAA+GGG 0.552432 2.1:-32921373 MS.gene90430:CDS
CAGAATCGAATGGAAGAGAA+AGG 0.555397 2.1:-32920932 MS.gene90430:CDS
CAAACCTGTACATTGGTATG+TGG 0.555627 2.1:+32920297 None:intergenic
AAGGTTTCTTCAAAGGGTGG+TGG 0.558132 2.1:-32923176 MS.gene90430:CDS
GAGCATCAAGTACGATGTAT+GGG 0.559060 2.1:-32921005 MS.gene90430:CDS
TATGCCACATACCAATGTAC+AGG 0.568570 2.1:-32920301 MS.gene90430:intron
GAGCAACTCATCAGAAGTGA+AGG 0.569571 2.1:-32921725 MS.gene90430:CDS
CATATCAGCTGTAAAGAACA+TGG 0.571245 2.1:-32919602 MS.gene90430:CDS
CTCAGTACTAACCCATCCCT+TGG 0.572036 2.1:+32921258 None:intergenic
TTATAATGTGCCATTTGACA+GGG 0.573430 2.1:+32920651 None:intergenic
GAAGACTTAACAAGTGCACT+TGG 0.574492 2.1:-32919634 MS.gene90430:CDS
AGCAACAAGTACCAAGGGAT+GGG 0.576647 2.1:-32921269 MS.gene90430:CDS
CTCATGCCAGGATATCAGAC+TGG 0.577228 2.1:-32922036 MS.gene90430:CDS
GAAGAAACATCTAATATTGG+TGG 0.577898 2.1:+32921697 None:intergenic
ACCGAAAAGAAAAGGAATAC+GGG 0.578211 2.1:+32920899 None:intergenic
GTTAAGGTTTCTTCAAAGGG+TGG 0.579681 2.1:-32923179 MS.gene90430:intron
GTATGTAGAAAACTTTGCGA+CGG 0.581650 2.1:+32921342 None:intergenic
ACATACAATCAAGGAAAGAG+TGG 0.582689 2.1:-32921325 MS.gene90430:CDS
GCTTGTGATCATTATTCTCG+AGG 0.582868 2.1:+32920594 None:intergenic
ATGAAAGCAACAAGTACCAA+GGG 0.583635 2.1:-32921274 MS.gene90430:CDS
AGCCGAGATGATTGGACGAG+TGG 0.583728 2.1:-32920726 MS.gene90430:CDS
ACTTCCATCAACATACTCAT+GGG 0.589217 2.1:-32921890 MS.gene90430:CDS
ATCCACTCGTCCAATCATCT+CGG 0.591466 2.1:+32920724 None:intergenic
AAGCAACAAGTACCAAGGGA+TGG 0.592367 2.1:-32921270 MS.gene90430:CDS
TGAGTTCAGGTCAACGCTAG+TGG 0.593166 2.1:-32920764 MS.gene90430:intron
ATAAGCAACATTCTGATCAG+TGG 0.595793 2.1:+32923061 None:intergenic
ATATTCCAAATCCTCAGCTA+CGG 0.598835 2.1:-32920625 MS.gene90430:CDS
GTAAAATCAAACCTGTACAT+TGG 0.599665 2.1:+32920290 None:intergenic
GAAAATCAAGGATATTATGT+CGG 0.602073 2.1:-32922714 MS.gene90430:CDS
TGTACATTGGTATGTGGCAT+AGG 0.603452 2.1:+32920303 None:intergenic
TTGAGCATTTCAATACCTTG+CGG 0.609987 2.1:+32920423 None:intergenic
AGAATGATTACAGGTTATGG+TGG 0.612198 2.1:-32922753 MS.gene90430:intron
AAAGGTACTTTAAACTCTGG+AGG 0.617094 2.1:-32921163 MS.gene90430:CDS
TGAGTTGCTCACATTAGATG+AGG 0.617233 2.1:+32921738 None:intergenic
TGATACTGGACATCGACACC+AGG 0.618053 2.1:+32921985 None:intergenic
ATTTGGTTGGAAAATCAGGA+AGG 0.619406 2.1:+32921083 None:intergenic
CATAAGGTGAAATATAGCCA+GGG 0.620198 2.1:+32921920 None:intergenic
ACACATGATCTTGCATCAGA+TGG 0.625382 2.1:+32923146 None:intergenic
TAAGTTGGTTGTAAAGAACA+TGG 0.629871 2.1:-32919572 MS.gene90430:CDS
TATGAAAGCAACAAGTACCA+AGG 0.634095 2.1:-32921275 MS.gene90430:CDS
CATACAATCAAGGAAAGAGT+GGG 0.635967 2.1:-32921324 MS.gene90430:CDS
TCAGGATGCACAGAATCGAA+TGG 0.637168 2.1:-32920942 MS.gene90430:CDS
AGGATAATATGCCGTAGCTG+AGG 0.638343 2.1:+32920614 None:intergenic
ATGAATAAGAAGAAGCTGCA+TGG 0.646230 2.1:-32923406 MS.gene90430:CDS
GAGTTGCTCACATTAGATGA+GGG 0.650819 2.1:+32921739 None:intergenic
TGGCAGCAAGATAAATGGAA+CGG 0.653548 2.1:-32920680 MS.gene90430:CDS
AGCAACTCATCAGAAGTGAA+GGG 0.655536 2.1:-32921724 MS.gene90430:CDS
AAATAGTAGAGACACTCAAG+AGG 0.657180 2.1:-32920564 MS.gene90430:intron
GAAGCTGAAACTCAGAAACA+AGG 0.666505 2.1:-32921236 MS.gene90430:CDS
ACCACACAAGATGTAGCACA+AGG 0.668664 2.1:-32921856 MS.gene90430:CDS
GTTGAAAGACGGAACCAGGA+GGG 0.679018 2.1:+32921956 None:intergenic
GAAAAGATCGATCTACCACT+CGG 0.689012 2.1:+32921805 None:intergenic
ATAAGGTGAAATATAGCCAG+GGG 0.699657 2.1:+32921921 None:intergenic
GTTGAGAAAGTGAATGACTG+AGG 0.708180 2.1:-32919535 None:intergenic
TGAACATAATAATTCCAACA+TGG 0.712248 2.1:-32923368 MS.gene90430:intron
TGTTGAAAGACGGAACCAGG+AGG 0.716372 2.1:+32921955 None:intergenic
GTTGGTTGTAAAGAACATGG+AGG 0.739574 2.1:-32919569 MS.gene90430:CDS
CCACACAAGATGTAGCACAA+GGG 0.750655 2.1:-32921855 MS.gene90430:CDS
ATCAGCTGTAAAGAACATGG+AGG 0.773499 2.1:-32919599 MS.gene90430:CDS
GAATTGGCCAGTAAACCGAG+TGG 0.774424 2.1:-32921820 MS.gene90430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGACTTCTAAATAAATTAT+TGG + chr2.1:32923185-32923204 None:intergenic 15.0%
!! ATAGTAGAAAAATAAAGAAT+TGG + chr2.1:32923140-32923159 None:intergenic 15.0%
!! ATATAAATGAAAAGTAAAGA+AGG + chr2.1:32923242-32923261 None:intergenic 15.0%
!! CATTTATTAAATATTGTGAA+AGG + chr2.1:32922998-32923017 None:intergenic 15.0%
!! GAAAATAACATGTTAATAAA+AGG - chr2.1:32920795-32920814 MS.gene90430:intron 15.0%
!! TAATTGTAACACAATTAAAA+AGG + chr2.1:32923215-32923234 None:intergenic 15.0%
!! TAGTAGAAAAATAAAGAATT+GGG + chr2.1:32923139-32923158 None:intergenic 15.0%
!! TATAAATGAAAAGTAAAGAA+GGG + chr2.1:32923241-32923260 None:intergenic 15.0%
!!! AATTCTTTATTTTTCTACTA+TGG - chr2.1:32923139-32923158 MS.gene90430:CDS 15.0%
!!! AATTTTTGTTGGTTTTATTT+AGG - chr2.1:32921015-32921034 MS.gene90430:CDS 15.0%
!!! ATGTTTTCTTATTGTATTTT+TGG - chr2.1:32919888-32919907 MS.gene90430:intron 15.0%
!!! GTAAATATCTAAATTTTTGT+TGG - chr2.1:32921004-32921023 MS.gene90430:CDS 15.0%
!!! TCTTTGCTTATATATAATTT+TGG - chr2.1:32923437-32923456 MS.gene90430:intron 15.0%
!!! TTGAATTCTGAAATAAATTT+GGG - chr2.1:32920754-32920773 MS.gene90430:CDS 15.0%
!!! TTTCTCTTTCTAAAATTATA+AGG + chr2.1:32921583-32921602 None:intergenic 15.0%
!!! TTTGAATTCTGAAATAAATT+TGG - chr2.1:32920753-32920772 MS.gene90430:CDS 15.0%
!! AAACAATAGTTAAAACAGAA+CGG + chr2.1:32921490-32921509 None:intergenic 20.0%
!! AATGTCAAAAAAGAATTCAT+TGG + chr2.1:32922915-32922934 None:intergenic 20.0%
!! AGATTATTCTAAATAGTTTG+TGG - chr2.1:32921676-32921695 MS.gene90430:CDS 20.0%
!! ATGAGTAGATTATGAAAATT+TGG + chr2.1:32923272-32923291 None:intergenic 20.0%
!! CAAAAACTAAAGAAATGAAA+GGG + chr2.1:32923409-32923428 None:intergenic 20.0%
!! CAAAGTAATTAATAACTCTT+TGG - chr2.1:32923081-32923100 MS.gene90430:CDS 20.0%
!! TGAGTAGATTATGAAAATTT+GGG + chr2.1:32923271-32923290 None:intergenic 20.0%
!!! ATTTGTTGTATGTTATGTTA+AGG - chr2.1:32919911-32919930 MS.gene90430:intron 20.0%
!!! ATTTTAGAAAGAGAAATAAG+TGG - chr2.1:32921587-32921606 MS.gene90430:intron 20.0%
!!! TCATGATAATTGTGTTATTA+TGG - chr2.1:32920476-32920495 MS.gene90430:intron 20.0%
!!! TGTTCTTCTTGTTTATTTTT+TGG - chr2.1:32919573-32919592 MS.gene90430:CDS 20.0%
!!! TTCTTTTTTGACATTATTGA+TGG - chr2.1:32922920-32922939 MS.gene90430:intron 20.0%
!!! TTTATGTTTTTCCTTTCTTA+CGG - chr2.1:32920329-32920348 MS.gene90430:CDS 20.0%
! AACTATATATTGAACTGTTG+GGG - chr2.1:32921610-32921629 MS.gene90430:intron 25.0%
! AACTCCAAATTATTCCAAAA+AGG + chr2.1:32923052-32923071 None:intergenic 25.0%
! AAGATACAGAAGAAATAACT+AGG + chr2.1:32922615-32922634 None:intergenic 25.0%
! ACTCCAAATTATTCCAAAAA+GGG + chr2.1:32923051-32923070 None:intergenic 25.0%
! ATGAGCAAATAAAACACAAA+CGG + chr2.1:32922274-32922293 None:intergenic 25.0%
! GAAAATCAAGGATATTATGT+CGG - chr2.1:32920392-32920411 MS.gene90430:CDS 25.0%
! GAACTATATATTGAACTGTT+GGG - chr2.1:32921609-32921628 MS.gene90430:intron 25.0%
! GCAAAAACTAAAGAAATGAA+AGG + chr2.1:32923410-32923429 None:intergenic 25.0%
! GTTGAAGAAACATCTAATAT+TGG + chr2.1:32921415-32921434 None:intergenic 25.0%
! TAACATTCAAGGAAAAAATG+TGG - chr2.1:32920897-32920916 MS.gene90430:intron 25.0%
! TAAGCATATATCTTCAGAAA+GGG - chr2.1:32920679-32920698 MS.gene90430:CDS 25.0%
! TATGTTAAGGTTTCTTCAAA+GGG - chr2.1:32919924-32919943 MS.gene90430:intron 25.0%
! TATTATGGATATTACTATCC+AGG - chr2.1:32920080-32920099 MS.gene90430:intron 25.0%
! TATTGCATTACACATGAAAA+TGG - chr2.1:32920827-32920846 MS.gene90430:intron 25.0%
! TCAGATTCAAGTATTTATAC+AGG + chr2.1:32920564-32920583 None:intergenic 25.0%
! TGAACATAATAATTCCAACA+TGG - chr2.1:32919738-32919757 MS.gene90430:intron 25.0%
! TGTAACACAATTAAAAAGGT+GGG + chr2.1:32923211-32923230 None:intergenic 25.0%
! TTAAGCATATATCTTCAGAA+AGG - chr2.1:32920678-32920697 MS.gene90430:CDS 25.0%
! TTAGTAAGAAGTAAGAACTT+TGG + chr2.1:32922862-32922881 None:intergenic 25.0%
! TTATGTTAAGGTTTCTTCAA+AGG - chr2.1:32919923-32919942 MS.gene90430:intron 25.0%
! TTGTAACACAATTAAAAAGG+TGG + chr2.1:32923212-32923231 None:intergenic 25.0%
!! AAGTTTTCTACATACAATCA+AGG - chr2.1:32921772-32921791 MS.gene90430:CDS 25.0%
!! TTTAGAATAGTTTGTCAACT+AGG + chr2.1:32923021-32923040 None:intergenic 25.0%
!!! AAGAAATGAAAGGGTTTTTT+CGG + chr2.1:32923400-32923419 None:intergenic 25.0%
!!! ACTTATTTTTACTCGAAACT+CGG - chr2.1:32923327-32923346 MS.gene90430:intron 25.0%
!!! ATACCCTTTTTGGAATAATT+TGG - chr2.1:32923045-32923064 MS.gene90430:CDS 25.0%
!!! ATTAGGAAAGTTGTTTTGAT+AGG + chr2.1:32921812-32921831 None:intergenic 25.0%
!!! ATTTTTTCCTTGAATGTTAC+AGG + chr2.1:32920896-32920915 None:intergenic 25.0%
!!! TTAGGAAAGTTGTTTTGATA+GGG + chr2.1:32921811-32921830 None:intergenic 25.0%
!!! TTCTGAAATAAATTTGGGAT+TGG - chr2.1:32920759-32920778 MS.gene90430:intron 25.0%
!!! TTTTGATAATTGTTGAGTTC+AGG - chr2.1:32922329-32922348 MS.gene90430:intron 25.0%
!!! TTTTGGAATAATTTGGAGTT+GGG - chr2.1:32923052-32923071 MS.gene90430:CDS 25.0%
!!! TTTTTGGAATAATTTGGAGT+TGG - chr2.1:32923051-32923070 MS.gene90430:CDS 25.0%
AGATCATGTGTATCATCAAT+AGG - chr2.1:32919972-32919991 MS.gene90430:intron 30.0%
AGGGAATCGTTATAATGAAT+TGG - chr2.1:32921270-32921289 MS.gene90430:CDS 30.0%
CAACCACAATTATGCAAAAA+TGG + chr2.1:32922968-32922987 None:intergenic 30.0%
GAAGAAACATCTAATATTGG+TGG + chr2.1:32921412-32921431 None:intergenic 30.0%
GGAACTATATATTGAACTGT+TGG - chr2.1:32921608-32921627 MS.gene90430:intron 30.0%
GTAAAATCAAACCTGTACAT+TGG + chr2.1:32922819-32922838 None:intergenic 30.0%
TAATCATTCTACCGTAAGAA+AGG + chr2.1:32920343-32920362 None:intergenic 30.0%
TACCGAAAAGAAAAGGAATA+CGG + chr2.1:32922211-32922230 None:intergenic 30.0%
TATTCTGCTGGTAGTTATTA+TGG - chr2.1:32920065-32920084 MS.gene90430:intron 30.0%
TCATATTTGGTTGGAAAATC+AGG + chr2.1:32922030-32922049 None:intergenic 30.0%
TGAGCAAATAAAACACAAAC+GGG + chr2.1:32922273-32922292 None:intergenic 30.0%
! AGTGGATTTCAACAAAAGTA+TGG - chr2.1:32922398-32922417 MS.gene90430:intron 30.0%
! ATTGATAACACTGACGAATA+GGG + chr2.1:32920126-32920145 None:intergenic 30.0%
! CATTTTTGCATAATTGTGGT+TGG - chr2.1:32922966-32922985 MS.gene90430:intron 30.0%
! CTGATAATTTGCATTGCATT+AGG - chr2.1:32920580-32920599 MS.gene90430:CDS 30.0%
! GAAAAGTGCATGATCATATT+TGG + chr2.1:32922043-32922062 None:intergenic 30.0%
! TCAACAAAAGTATGGATTTC+TGG - chr2.1:32922406-32922425 MS.gene90430:intron 30.0%
! TCTAAACTTGATACCCTTTT+TGG - chr2.1:32923035-32923054 MS.gene90430:CDS 30.0%
!! AATAGTTTGTGGTGTTTTTC+AGG - chr2.1:32921687-32921706 MS.gene90430:CDS 30.0%
!! AGAACTTTGGAATAAGAACA+AGG + chr2.1:32922849-32922868 None:intergenic 30.0%
!! GTACTTGTTGCTTTCATATT+AGG + chr2.1:32921829-32921848 None:intergenic 30.0%
!! TTATAATGTGCCATTTGACA+GGG + chr2.1:32922458-32922477 None:intergenic 30.0%
!! TTTATAATGTGCCATTTGAC+AGG + chr2.1:32922459-32922478 None:intergenic 30.0%
!!! AATTTGGGATTGGCTAATTT+TGG - chr2.1:32920769-32920788 MS.gene90430:intron 30.0%
!!! TAGGAAAGTTGTTTTGATAG+GGG + chr2.1:32921810-32921829 None:intergenic 30.0%
AAATAGTAGAGACACTCAAG+AGG - chr2.1:32922542-32922561 MS.gene90430:intron 35.0%
AATTGACCAGATATGCAACA+AGG + chr2.1:32920523-32920542 None:intergenic 35.0%
ACATACAATCAAGGAAAGAG+TGG - chr2.1:32921781-32921800 MS.gene90430:CDS 35.0%
ACCGAAAAGAAAAGGAATAC+GGG + chr2.1:32922210-32922229 None:intergenic 35.0%
ACTTCCATCAACATACTCAT+GGG - chr2.1:32921216-32921235 MS.gene90430:CDS 35.0%
AGAATGATTACAGGTTATGG+TGG - chr2.1:32920353-32920372 MS.gene90430:CDS 35.0%
AGTGCATGATCATATTTGGT+TGG + chr2.1:32922039-32922058 None:intergenic 35.0%
ATAAGCAACATTCTGATCAG+TGG + chr2.1:32920048-32920067 None:intergenic 35.0%
ATAAGGTGAAATATAGCCAG+GGG + chr2.1:32921188-32921207 None:intergenic 35.0%
ATATTCCAAATCCTCAGCTA+CGG - chr2.1:32922481-32922500 MS.gene90430:intron 35.0%
ATGAAAGCAACAAGTACCAA+GGG - chr2.1:32921832-32921851 MS.gene90430:CDS 35.0%
ATGAATAAGAAGAAGCTGCA+TGG - chr2.1:32919700-32919719 MS.gene90430:intron 35.0%
ATGGCTGCTGAATTGAAAAA+AGG - chr2.1:32919537-32919556 MS.gene90430:CDS 35.0%
ATTTGGTTGGAAAATCAGGA+AGG + chr2.1:32922026-32922045 None:intergenic 35.0%
CAATAGTTAAAACAGAACGG+AGG + chr2.1:32921487-32921506 None:intergenic 35.0%
CATAAGGTGAAATATAGCCA+GGG + chr2.1:32921189-32921208 None:intergenic 35.0%
CATACAATCAAGGAAAGAGT+GGG - chr2.1:32921782-32921801 MS.gene90430:CDS 35.0%
CATATCAGCTGTAAAGAACA+TGG - chr2.1:32923504-32923523 MS.gene90430:intron 35.0%
CCTAGAACAGTTAATGCAAA+AGG - chr2.1:32921925-32921944 MS.gene90430:CDS 35.0%
CTCACAACAACATGAAACAA+TGG + chr2.1:32920626-32920645 None:intergenic 35.0%
GATAGCATACCGAAAAGAAA+AGG + chr2.1:32922218-32922237 None:intergenic 35.0%
GGTAGAATGATTACAGGTTA+TGG - chr2.1:32920350-32920369 MS.gene90430:CDS 35.0%
GTATGTAGAAAACTTTGCGA+CGG + chr2.1:32921767-32921786 None:intergenic 35.0%
TACTTCCATCAACATACTCA+TGG - chr2.1:32921215-32921234 MS.gene90430:CDS 35.0%
TATGAAAGCAACAAGTACCA+AGG - chr2.1:32921831-32921850 MS.gene90430:CDS 35.0%
TATGGAGAGCAAGAAAATCA+AGG - chr2.1:32920380-32920399 MS.gene90430:CDS 35.0%
TATGTAGAAAACTTTGCGAC+GGG + chr2.1:32921766-32921785 None:intergenic 35.0%
TCACTTAATGAGCAGAATCA+AGG - chr2.1:32921901-32921920 MS.gene90430:CDS 35.0%
TCCAATTGGTTGTTGAAAGA+CGG + chr2.1:32921164-32921183 None:intergenic 35.0%
TCTTACGGTAGAATGATTAC+AGG - chr2.1:32920344-32920363 MS.gene90430:CDS 35.0%
TGTATCGAGAACATCGATAT+TGG - chr2.1:32922721-32922740 MS.gene90430:CDS 35.0%
TTAGACAGCGACAAATAAAC+AGG + chr2.1:32921518-32921537 None:intergenic 35.0%
TTCACTTTCTCAACCAACTT+AGG + chr2.1:32923565-32923584 None:intergenic 35.0%
TTGAGCATTTCAATACCTTG+CGG + chr2.1:32922686-32922705 None:intergenic 35.0%
! AAGTTTCTTGAGCTGGTTTA+TGG - chr2.1:32920445-32920464 MS.gene90430:intron 35.0%
! ATGTTGATCTGTCCTGATTT+TGG + chr2.1:32922001-32922020 None:intergenic 35.0%
! CCTTTTGCATTAACTGTTCT+AGG + chr2.1:32921928-32921947 None:intergenic 35.0%
! GATTGATAACACTGACGAAT+AGG + chr2.1:32920127-32920146 None:intergenic 35.0%
! GTGTCTCTACTATTTGTTAC+AGG + chr2.1:32922537-32922556 None:intergenic 35.0%
! TCCCGTATTCCTTTTCTTTT+CGG - chr2.1:32922206-32922225 MS.gene90430:intron 35.0%
! TTAAACTCTGGAGGTAATTC+TGG - chr2.1:32921952-32921971 MS.gene90430:CDS 35.0%
! TTTTGCATAATTGTGGTTGG+AGG - chr2.1:32922969-32922988 MS.gene90430:intron 35.0%
!! AAAGGTACTTTAAACTCTGG+AGG - chr2.1:32921943-32921962 MS.gene90430:CDS 35.0%
!! ATTTCTGGCAGCAAGATAAA+TGG - chr2.1:32922421-32922440 MS.gene90430:intron 35.0%
!! CTATGGTTGATGTGTTCTTT+TGG - chr2.1:32923156-32923175 MS.gene90430:CDS 35.0%
!! GCAAAAGGTACTTTAAACTC+TGG - chr2.1:32921940-32921959 MS.gene90430:CDS 35.0%
!! GGACCATTTTTGCATAATTG+TGG - chr2.1:32922962-32922981 MS.gene90430:intron 35.0%
!! GTTACCTTGTTTGCTTGTTT+TGG + chr2.1:32921457-32921476 None:intergenic 35.0%
!!! AATGAAAGGGTTTTTTCGGT+TGG + chr2.1:32923396-32923415 None:intergenic 35.0%
!!! ACAGGTTATGGTGGATTTTA+TGG - chr2.1:32920362-32920381 MS.gene90430:CDS 35.0%
!!! GCTTCTGGTAGTTTTAAAGA+AGG - chr2.1:32919999-32920018 MS.gene90430:intron 35.0%
!!! TTTTTTCGGTTGGACTAGTT+TGG + chr2.1:32923386-32923405 None:intergenic 35.0%
AAAACAGAACGGAGGAAGTA+AGG + chr2.1:32921479-32921498 None:intergenic 40.0%
AACCAGCTCAAGAAACTTAC+AGG + chr2.1:32920443-32920462 None:intergenic 40.0%
ACACATGATCTTGCATCAGA+TGG + chr2.1:32919963-32919982 None:intergenic 40.0%
ACGGATATTTCCCTGTCAAA+TGG - chr2.1:32922445-32922464 MS.gene90430:intron 40.0%
AGCAACTCATCAGAAGTGAA+GGG - chr2.1:32921382-32921401 MS.gene90430:CDS 40.0%
ATCAGCTGTAAAGAACATGG+AGG - chr2.1:32923507-32923526 MS.gene90430:intron 40.0%
ATCCTGTAAGTTTCTTGAGC+TGG - chr2.1:32920438-32920457 MS.gene90430:intron 40.0%
ATTGCATCTGAATGGAGAAC+AGG + chr2.1:32921727-32921746 None:intergenic 40.0%
CAAACCTGTACATTGGTATG+TGG + chr2.1:32922812-32922831 None:intergenic 40.0%
CAACATTCTGATCAGTGGAT+TGG + chr2.1:32920043-32920062 None:intergenic 40.0%
CAGAATCGAATGGAAGAGAA+AGG - chr2.1:32922174-32922193 MS.gene90430:intron 40.0%
CATTCAGATGCAATGCCAAA+GGG - chr2.1:32921733-32921752 MS.gene90430:CDS 40.0%
CCATAAGGTGAAATATAGCC+AGG + chr2.1:32921190-32921209 None:intergenic 40.0%
CCTGGCTATATTTCACCTTA+TGG - chr2.1:32921187-32921206 MS.gene90430:CDS 40.0%
CTCTGTTCTGTTAAGACCTA+CGG - chr2.1:32922247-32922266 MS.gene90430:intron 40.0%
CTGATGTCCTGTAACATTCA+AGG - chr2.1:32920886-32920905 MS.gene90430:intron 40.0%
GAAAAGATCGATCTACCACT+CGG + chr2.1:32921304-32921323 None:intergenic 40.0%
GAAGACTTAACAAGTGCACT+TGG - chr2.1:32923472-32923491 MS.gene90430:intron 40.0%
GAAGCTGAAACTCAGAAACA+AGG - chr2.1:32921870-32921889 MS.gene90430:CDS 40.0%
GAATCCCATGAGTATGTTGA+TGG + chr2.1:32921223-32921242 None:intergenic 40.0%
GAGCATCAAGTACGATGTAT+GGG - chr2.1:32922101-32922120 MS.gene90430:intron 40.0%
GAGTTGCTCACATTAGATGA+GGG + chr2.1:32921370-32921389 None:intergenic 40.0%
GATGGAAGTAACTCACCATA+AGG + chr2.1:32921205-32921224 None:intergenic 40.0%
GCTTGTGATCATTATTCTCG+AGG + chr2.1:32922515-32922534 None:intergenic 40.0%
GTACACCTAATGGCAATAAG+AGG - chr2.1:32922127-32922146 MS.gene90430:intron 40.0%
GTTAAGGTTTCTTCAAAGGG+TGG - chr2.1:32919927-32919946 MS.gene90430:intron 40.0%
GTTGGTTGTAAAGAACATGG+AGG - chr2.1:32923537-32923556 MS.gene90430:intron 40.0%
TACCTTGCGGAAAATGAATC+TGG + chr2.1:32922673-32922692 None:intergenic 40.0%
TAGGTCATGCAAGCAGATAA+TGG - chr2.1:32921034-32921053 MS.gene90430:CDS 40.0%
TATGCCACATACCAATGTAC+AGG - chr2.1:32922805-32922824 MS.gene90430:intron 40.0%
TCAATGGTGACACCAAAATC+AGG - chr2.1:32921986-32922005 MS.gene90430:CDS 40.0%
TCATCAATAGGAGATGCTTC+TGG - chr2.1:32919984-32920003 MS.gene90430:intron 40.0%
TCCGTCTTTCAACAACCAAT+TGG - chr2.1:32921160-32921179 MS.gene90430:CDS 40.0%
TCTTATGTCTATCTCATGCC+AGG - chr2.1:32921058-32921077 MS.gene90430:CDS 40.0%
TGAGTTGCTCACATTAGATG+AGG + chr2.1:32921371-32921390 None:intergenic 40.0%
TGGCAGCAAGATAAATGGAA+CGG - chr2.1:32922426-32922445 MS.gene90430:intron 40.0%
TGTACATTGGTATGTGGCAT+AGG + chr2.1:32922806-32922825 None:intergenic 40.0%
TTTGTTCAGATTCCGCTATG+CGG - chr2.1:32920249-32920268 MS.gene90430:intron 40.0%
! AACGCTAGTGGTCAATTTTG+TGG - chr2.1:32922354-32922373 MS.gene90430:intron 40.0%
! AGAGCATCAAGTACGATGTA+TGG - chr2.1:32922100-32922119 MS.gene90430:intron 40.0%
! CAGAATGTTGCTTATTCTGC+TGG - chr2.1:32920053-32920072 MS.gene90430:intron 40.0%
! TAGTTGCCTTGTTGCATATC+TGG - chr2.1:32920514-32920533 MS.gene90430:intron 40.0%
! TTCCAGATTCATTTTCCGCA+AGG - chr2.1:32922668-32922687 MS.gene90430:intron 40.0%
! TTTTTACGAAACCCGTCAGA+AGG - chr2.1:32922754-32922773 MS.gene90430:intron 40.0%
!! TCTGGAGATAAGAGTGTCAA+TGG - chr2.1:32921970-32921989 MS.gene90430:CDS 40.0%
!!! GTTTTTCAGGCATCCATTTC+TGG - chr2.1:32921700-32921719 MS.gene90430:CDS 40.0%
AAGCAACAAGTACCAAGGGA+TGG - chr2.1:32921836-32921855 MS.gene90430:CDS 45.0%
AAGGTTTCTTCAAAGGGTGG+TGG - chr2.1:32919930-32919949 MS.gene90430:intron 45.0%
ACATTAACGCTACCGCATAG+CGG + chr2.1:32920264-32920283 None:intergenic 45.0%
ACCACACAAGATGTAGCACA+AGG - chr2.1:32921250-32921269 MS.gene90430:CDS 45.0%
ACTGACGAATAGGGAACCAT+GGG + chr2.1:32920117-32920136 None:intergenic 45.0%
AGCAACAAGTACCAAGGGAT+GGG - chr2.1:32921837-32921856 MS.gene90430:CDS 45.0%
AGGACATCAGAGATGATGTC+GGG + chr2.1:32920876-32920895 None:intergenic 45.0%
AGGATAATATGCCGTAGCTG+AGG + chr2.1:32922495-32922514 None:intergenic 45.0%
ATAAAACACAAACGGGCCGT+AGG + chr2.1:32922266-32922285 None:intergenic 45.0%
ATATAGCCAGGGGATCCAAT+TGG + chr2.1:32921178-32921197 None:intergenic 45.0%
ATATGCCGTAGCTGAGGATT+TGG + chr2.1:32922489-32922508 None:intergenic 45.0%
ATCCACTCGTCCAATCATCT+CGG + chr2.1:32922385-32922404 None:intergenic 45.0%
ATGGAGAACAGGACCAGAAA+TGG + chr2.1:32921716-32921735 None:intergenic 45.0%
CACATGCAAGCTTACCATGT+TGG + chr2.1:32919755-32919774 None:intergenic 45.0%
CAGGACATCAGAGATGATGT+CGG + chr2.1:32920877-32920896 None:intergenic 45.0%
CCACACAAGATGTAGCACAA+GGG - chr2.1:32921251-32921270 MS.gene90430:CDS 45.0%
CCAGCCAAAACAAGCAAACA+AGG - chr2.1:32921450-32921469 MS.gene90430:intron 45.0%
CCATTCAGATGCAATGCCAA+AGG - chr2.1:32921732-32921751 MS.gene90430:CDS 45.0%
CCTTTGGCATTGCATCTGAA+TGG + chr2.1:32921735-32921754 None:intergenic 45.0%
GAACATGGAGGATCCTAAGT+TGG - chr2.1:32923519-32923538 MS.gene90430:intron 45.0%
GAGCAACTCATCAGAAGTGA+AGG - chr2.1:32921381-32921400 MS.gene90430:CDS 45.0%
GGATGAGTGCATGTGATTGT+GGG - chr2.1:32922941-32922960 MS.gene90430:intron 45.0%
TACTTTCCTGTGAACACACC+TGG - chr2.1:32921103-32921122 MS.gene90430:CDS 45.0%
TCAGGATGCACAGAATCGAA+TGG - chr2.1:32922164-32922183 MS.gene90430:intron 45.0%
TCGAGCCTCTTATTGCCATT+AGG + chr2.1:32922135-32922154 None:intergenic 45.0%
TCTCTTGCATGACCTTCTGA+CGG + chr2.1:32922769-32922788 None:intergenic 45.0%
TGAACTGTTGGGGATTTCGT+AGG - chr2.1:32921620-32921639 MS.gene90430:intron 45.0%
TGGATGAGTGCATGTGATTG+TGG - chr2.1:32922940-32922959 MS.gene90430:intron 45.0%
! TTTTCTTCGCAGAGTCGTAC+TGG - chr2.1:32921319-32921338 MS.gene90430:CDS 45.0%
!!! CCTTGTTTGCTTGTTTTGGC+TGG + chr2.1:32921453-32921472 None:intergenic 45.0%
!!! TTTATTTTTTTTATATTTTG+CGG - chr2.1:32919802-32919821 MS.gene90430:intron 5.0%
ACGAATAGGGAACCATGGGA+GGG + chr2.1:32920113-32920132 None:intergenic 50.0%
CAACAACCAATTGGATCCCC+TGG - chr2.1:32921169-32921188 MS.gene90430:CDS 50.0%
CACTGACGAATAGGGAACCA+TGG + chr2.1:32920118-32920137 None:intergenic 50.0%
CAGGAGGGTAAACCTGATAC+TGG + chr2.1:32921138-32921157 None:intergenic 50.0%
CAGTATCAGGTTTACCCTCC+TGG - chr2.1:32921136-32921155 MS.gene90430:CDS 50.0%
CCCTTGTGCTACATCTTGTG+TGG + chr2.1:32921254-32921273 None:intergenic 50.0%
CGATCTACCACTCGGTTTAC+TGG + chr2.1:32921296-32921315 None:intergenic 50.0%
CTCAGTACTAACCCATCCCT+TGG + chr2.1:32921851-32921870 None:intergenic 50.0%
CTCATGCCAGGATATCAGAC+TGG - chr2.1:32921070-32921089 MS.gene90430:CDS 50.0%
CTCTTGCATGACCTTCTGAC+GGG + chr2.1:32922768-32922787 None:intergenic 50.0%
GAATTGGCCAGTAAACCGAG+TGG - chr2.1:32921286-32921305 MS.gene90430:CDS 50.0%
GAGGCTCGACAATGCATTTC+AGG - chr2.1:32922146-32922165 MS.gene90430:intron 50.0%
GAGTAGCCAGTCTGATATCC+TGG + chr2.1:32921079-32921098 None:intergenic 50.0%
GCTATGCGGTAGCGTTAATG+TGG - chr2.1:32920263-32920282 MS.gene90430:intron 50.0%
GGTTGTTGAAAGACGGAACC+AGG + chr2.1:32921157-32921176 None:intergenic 50.0%
GTATGGGCGAGTACACCTAA+TGG - chr2.1:32922117-32922136 MS.gene90430:intron 50.0%
GTTGAAAGACGGAACCAGGA+GGG + chr2.1:32921153-32921172 None:intergenic 50.0%
TGAGTTCAGGTCAACGCTAG+TGG - chr2.1:32922342-32922361 MS.gene90430:intron 50.0%
TGATACTGGACATCGACACC+AGG + chr2.1:32921124-32921143 None:intergenic 50.0%
TGTGGAGTAGCCGAGATGAT+TGG - chr2.1:32922372-32922391 MS.gene90430:intron 50.0%
TGTTGAAAGACGGAACCAGG+AGG + chr2.1:32921154-32921173 None:intergenic 50.0%
!! TGGTGTCGATGTCCAGTATC+AGG - chr2.1:32921123-32921142 MS.gene90430:CDS 50.0%
!! TTATGTCGGCGCTGATGCTA+TGG - chr2.1:32920406-32920425 MS.gene90430:CDS 50.0%
AGCCGAGATGATTGGACGAG+TGG - chr2.1:32922380-32922399 MS.gene90430:intron 55.0%
GACGAATAGGGAACCATGGG+AGG + chr2.1:32920114-32920133 None:intergenic 55.0%
GCGACGGGAAAAGAACCCTT+TGG + chr2.1:32921751-32921770 None:intergenic 55.0%
TCGACACCAGGTGTGTTCAC+AGG + chr2.1:32921112-32921131 None:intergenic 55.0%
CCATGGGAGGGAAGCTAACC+TGG + chr2.1:32920101-32920120 None:intergenic 60.0%
! TCGCAGAGTCGTACTGGCAG+TGG - chr2.1:32921325-32921344 MS.gene90430:CDS 60.0%
!! CCAGGTTAGCTTCCCTCCCA+TGG - chr2.1:32920098-32920117 MS.gene90430:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 32919537 32923591 32919537 ID=MS.gene90430
chr2.1 mRNA 32919537 32923591 32919537 ID=MS.gene90430.t1;Parent=MS.gene90430
chr2.1 exon 32923570 32923591 32923570 ID=MS.gene90430.t1.exon1;Parent=MS.gene90430.t1
chr2.1 CDS 32923570 32923591 32923570 ID=cds.MS.gene90430.t1;Parent=MS.gene90430.t1
chr2.1 exon 32923369 32923439 32923369 ID=MS.gene90430.t1.exon2;Parent=MS.gene90430.t1
chr2.1 CDS 32923369 32923439 32923369 ID=cds.MS.gene90430.t1;Parent=MS.gene90430.t1
chr2.1 exon 32923027 32923195 32923027 ID=MS.gene90430.t1.exon3;Parent=MS.gene90430.t1
chr2.1 CDS 32923027 32923195 32923027 ID=cds.MS.gene90430.t1;Parent=MS.gene90430.t1
chr2.1 exon 32922686 32922762 32922686 ID=MS.gene90430.t1.exon4;Parent=MS.gene90430.t1
chr2.1 CDS 32922686 32922762 32922686 ID=cds.MS.gene90430.t1;Parent=MS.gene90430.t1
chr2.1 exon 32921657 32922091 32921657 ID=MS.gene90430.t1.exon5;Parent=MS.gene90430.t1
chr2.1 CDS 32921657 32922091 32921657 ID=cds.MS.gene90430.t1;Parent=MS.gene90430.t1
chr2.1 exon 32920901 32921419 32920901 ID=MS.gene90430.t1.exon6;Parent=MS.gene90430.t1
chr2.1 CDS 32920901 32921419 32920901 ID=cds.MS.gene90430.t1;Parent=MS.gene90430.t1
chr2.1 exon 32920565 32920777 32920565 ID=MS.gene90430.t1.exon7;Parent=MS.gene90430.t1
chr2.1 CDS 32920565 32920777 32920565 ID=cds.MS.gene90430.t1;Parent=MS.gene90430.t1
chr2.1 exon 32920302 32920454 32920302 ID=MS.gene90430.t1.exon8;Parent=MS.gene90430.t1
chr2.1 CDS 32920302 32920454 32920302 ID=cds.MS.gene90430.t1;Parent=MS.gene90430.t1
chr2.1 exon 32919537 32919662 32919537 ID=MS.gene90430.t1.exon9;Parent=MS.gene90430.t1
chr2.1 CDS 32919537 32919662 32919537 ID=cds.MS.gene90430.t1;Parent=MS.gene90430.t1
Gene Sequence

>MS.gene90430

ATGGCTGCTGAATTGAAAAAAGGTATTTGTTTTCTTTGTTCTTCTTGTTTATTTTTTGGTTTAGATTTAAATTTTATTTCAATTTGATTATGATTTGAATATTTTGATTTTTTTTTTAATAAAAATGAGATTTTTACTGTGTTTTTTTACAGCTGCAGATGAAATGAATAAGAAGAAGCTGCATGGTGATTCTTCAACAGCTGAACATAATAATTCCAACATGGTAAGCTTGCATGTGATTTCTAAATTTTTATTTTATTTTTGTTTTATTTTTTTTATATTTTGCGGCTTAATTTTGAATTTTGAAATTAACTGTTTCATTAGTTATATGCATGAAACTTGAAGAATTACATGTTTTCTTATTGTATTTTTGGATTTGTTGTATGTTATGTTAAGGTTTCTTCAAAGGGTGGTGGAAGTTCACCATCTGATGCAAGATCATGTGTATCATCAATAGGAGATGCTTCTGGTAGTTTTAAAGAAGGCGATGTTGATCATGAATTCCAATCCACTGATCAGAATGTTGCTTATTCTGCTGGTAGTTATTATGGATATTACTATCCAGGTTAGCTTCCCTCCCATGGTTCCCTATTCGTCAGTGTTATCAATCGCAGATCGCAGAAACTAGCAGTTTGTTCAAATTATGATATGCTATATCACAGTTGTTGATGCTATTTGACAACAGTTTGTTTAAAATAGAGAACAGTAGCGATTTGTTCAGATTCCGCTATGCGGTAGCGTTAATGTGGCTGCTATTTGACAACACTGCTATTCGTTTATGTTGATTGTATATTTATGTTTTTCCTTTCTTACGGTAGAATGATTACAGGTTATGGTGGATTTTATGGAGAGCAAGAAAATCAAGGATATTATGTCGGCGCTGATGCTATGGATTTTCAGTATCCTGTAAGTTTCTTGAGCTGGTTTATGGTTTTTTTGTCATGATAATTGTGTTATTATGGTTCAGTCTTTCTATGTAGTTGCCTTGTTGCATATCTGGTCAATTCAGTCTATGCATTTGATGCCTGTATAAATACTTGAATCTGATAATTTGCATTGCATTAGGCAAGTCTTTAGAATCATATTCCATTGTTTCATGTTGTTGTGAGAAACATGCATGTGTCTCAAAGAATCGTATTCTTTAAGCATATATCTTCAGAAAGGGTTGAATAGAAAATAAAACTGTAATGATGATGTATAATGTTTTTTAGCACATTTTGAATTCTGAAATAAATTTGGGATTGGCTAATTTTGGCTTGAAAATAACATGTTAATAAAAGGCTTCATTCATATTGCATTACACATGAAAATGGTTAATATTTTAAACTACTATTTACCCGACATCATCTCTGATGTCCTGTAACATTCAAGGAAAAAATGTGGCTAGTAAATATGATTTTATGAAATGATAAGAATTCATTATGCAGACATATACTTGATCTCTCATATGTTCTACAACATATATATGTAAATATCTAAATTTTTGTTGGTTTTATTTAGGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCATGCCAGGATATCAGACTGGCTACTCTTCATACTTTCCTGTGAACACACCTGGTGTCGATGTCCAGTATCAGGTTTACCCTCCTGGTTCCGTCTTTCAACAACCAATTGGATCCCCTGGCTATATTTCACCTTATGGTGAGTTACTTCCATCAACATACTCATGGGATTCATCTTTAACCACACAAGATGTAGCACAAGGGAATCGTTATAATGAATTGGCCAGTAAACCGAGTGGTAGATCGATCTTTTCTTCGCAGAGTCGTACTGGCAGTGGTATTGTGTCAAAGTCTGTGCCCTCATCTAATGTGAGCAACTCATCAGAAGTGAAGGGTTTGCCACCAATATTAGATGTTTCTTCAACACATGTTAAGCGCAACCAGCCAAAACAAGCAAACAAGGTAACCTTACTTCCTCCGTTCTGTTTTAACTATTGTTTTTGTTCCTGTTTATTTGTCGCTGTCTAAGTTCAATGCAATATTAACTATTGTTTTTTCGATATATGCTTACCTTATAATTTTAGAAAGAGAAATAAGTGGAACTATATATTGAACTGTTGGGGATTTCGTAGGAAAACAACAAATAATTTCATCAAAAGTTAAATTAGATTATTCTAAATAGTTTGTGGTGTTTTTCAGGCATCCATTTCTGGTCCTGTTCTCCATTCAGATGCAATGCCAAAGGGTTCTTTTCCCGTCGCAAAGTTTTCTACATACAATCAAGGAAAGAGTGGGTTCCCCTATCAAAACAACTTTCCTAATATGAAAGCAACAAGTACCAAGGGATGGGTTAGTACTGAGAAGCTGAAACTCAGAAACAAGGTTAATGATTCACTTAATGAGCAGAATCAAGGTCCTAGAACAGTTAATGCAAAAGGTACTTTAAACTCTGGAGGTAATTCTGGAGATAAGAGTGTCAATGGTGACACCAAAATCAGGACAGATCAACATAACCTTCCTGATTTTCCAACCAAATATGATCATGCACTTTTCTTCGTCATTAAATCGTACAGTGAAGATGATGTTCATAAGAGCATCAAGTACGATGTATGGGCGAGTACACCTAATGGCAATAAGAGGCTCGACAATGCATTTCAGGATGCACAGAATCGAATGGAAGAGAAAGGAAGCATGTGTCCCGTATTCCTTTTCTTTTCGGTATGCTATCAAGTTCAATCTCTGTTCTGTTAAGACCTACGGCCCGTTTGTGTTTTATTTGCTCATTTATTTATCTTAGAAAAATACGACTCACATCAGTGTTTTGATAATTGTTGAGTTCAGGTCAACGCTAGTGGTCAATTTTGTGGAGTAGCCGAGATGATTGGACGAGTGGATTTCAACAAAAGTATGGATTTCTGGCAGCAAGATAAATGGAACGGATATTTCCCTGTCAAATGGCACATTATAAAAGATATTCCAAATCCTCAGCTACGGCATATTATCCTCGAGAATAATGATCACAAGCCTGTAACAAATAGTAGAGACACTCAAGAGGTTTGCATTTTTTTAACATTCTATTAAAGCAACTGTTTACAGAAATGTCCTAGTTATTTCTTCTGTATCTTCACTATTGTGTTAATTGTGTTAATGTTTCGACTTTCCAGATTCATTTTCCGCAAGGTATTGAAATGCTCAACATTTTCAAAAACTATGTATCGAGAACATCGATATTGGATGATTTTGATTTTTACGAAACCCGTCAGAAGGTCATGCAAGAGAAGAAAATAAGACAACCTATGCCACATACCAATGTACAGGTTTGATTTTACACTTGTACCTTGTTCTTATTCCAAAGTTCTTACTTCTTACTAATGATAGCACTAGCACTAGCACATATTGATTCCAATGAATTCTTTTTTGACATTATTGATGGATGAGTGCATGTGATTGTGGGACCATTTTTGCATAATTGTGGTTGGAGGAATCCTTTCACAATATTTAATAAATGCCTAGTTGACAAACTATTCTAAACTTGATACCCTTTTTGGAATAATTTGGAGTTGGGAAATCTCAAAGTAATTAATAACTCTTTGGAGCATGTTCTTTTATTTATCTCTTTTGTATTTCCCAATTCTTTATTTTTCTACTATGGTTGATGTGTTCTTTTGGTGTCCAATAATTTATTTAGAAGTCTTAGACCCACCTTTTTAATTGTGTTACAATTATGTCCCTTCTTTACTTTTCATTTATATAAAACTCCCAAATTTTCATAATCTACTCATAATTTTCACACATTTAATCAGCTAAGTTTTTTTACACTTATTTTTACTCGAAACTCGGCAAAACAATTCAAGACTAATAGTTGTGCATAGTCCAAACTAGTCCAACCGAAAAAACCCTTTCATTTCTTTAGTTTTTGCTTTGATCTCTTTGCTTATATATAATTTTGGTTGCAGCATATAGAAGACTTAACAAGTGCACTTGGATCAGTAGACATATCAGCTGTAAAGAACATGGAGGATCCTAAGTTGGTTGTAAAGAACATGGAGGATCCTAAGTTGGTTGAGAAAGTGAATGACTGA
Protein sequence

>MS.gene90430.t1

MAAELKKAADEMNKKKLHGDSSTAEHNNSNMVSSKGGGSSPSDARSCVSSIGDASGSFKEGDVDHEFQSTDQNVAYSAGSYYGYYYPGYGGFYGEQENQGYYVGADAMDFQYPVMQADNGSYVYLMPGYQTGYSSYFPVNTPGVDVQYQVYPPGSVFQQPIGSPGYISPYGELLPSTYSWDSSLTTQDVAQGNRYNELASKPSGRSIFSSQSRTGSGIVSKSVPSSNVSNSSEVKGLPPILDVSSTHVKRNQPKQANKASISGPVLHSDAMPKGSFPVAKFSTYNQGKSGFPYQNNFPNMKATSTKGWVSTEKLKLRNKVNDSLNEQNQGPRTVNAKGTLNSGGNSGDKSVNGDTKIRTDQHNLPDFPTKYDHALFFVIKSYSEDDVHKSIKYDVWASTPNGNKRLDNAFQDAQNRMEEKGSMCPVFLFFSVNASGQFCGVAEMIGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDIPNPQLRHIILENNDHKPVTNSRDTQEIHFPQGIEMLNIFKNYVSRTSILDDFDFYETRQKVMQEKKIRQPMPHTNVQHIEDLTSALGSVDISAVKNMEDPKLVVKNMEDPKLVEKVND