AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90387

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90387.t1 MTR_2g063460 96.633 594 10 1 1 594 1 584 0.0 1182
MS.gene90387.t1 MTR_2g063460 96.296 594 10 2 1 594 1 582 0.0 1173
MS.gene90387.t1 MTR_2g032660 42.115 520 227 18 70 544 46 536 5.23e-104 329
MS.gene90387.t1 MTR_4g123630 42.664 518 234 13 70 547 11 505 2.48e-103 326
MS.gene90387.t1 MTR_4g005110 64.783 230 75 2 318 545 337 562 1.04e-95 306
MS.gene90387.t1 MTR_8g088390 50.502 299 116 8 276 548 234 526 4.95e-85 277
MS.gene90387.t1 MTR_8g088390 50.502 299 116 8 276 548 299 591 1.05e-84 278
MS.gene90387.t1 MTR_2g005840 62.842 183 68 0 360 542 237 419 7.32e-83 268
MS.gene90387.t1 MTR_2g005840 62.842 183 68 0 360 542 268 450 2.61e-82 267
MS.gene90387.t1 MTR_7g085500 57.820 211 79 2 357 567 415 615 8.90e-80 265
MS.gene90387.t1 MTR_6g032970 52.033 246 88 5 322 547 336 571 3.32e-77 257
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90387.t1 AT1G79270 44.877 488 207 11 91 568 63 498 6.80e-123 372
MS.gene90387.t1 AT1G79270 44.877 488 207 11 91 568 63 498 6.80e-123 372
MS.gene90387.t1 AT1G79270 44.877 488 207 11 91 568 63 498 6.80e-123 372
MS.gene90387.t1 AT1G79270 44.877 488 207 11 91 568 78 513 7.89e-123 373
MS.gene90387.t1 AT1G48110 39.412 510 246 13 71 546 13 493 1.46e-98 313
MS.gene90387.t1 AT1G48110 39.412 510 246 13 71 546 13 493 1.46e-98 313
MS.gene90387.t1 AT3G13060 54.007 287 107 7 306 573 294 574 1.55e-92 297
MS.gene90387.t1 AT3G13060 54.007 287 107 7 306 573 294 574 1.55e-92 297
MS.gene90387.t1 AT3G13060 57.031 256 88 4 306 545 316 565 2.03e-92 297
MS.gene90387.t1 AT3G13060 57.031 256 88 4 306 545 306 555 2.50e-92 297
MS.gene90387.t1 AT3G17330 40.807 446 213 13 116 547 35 443 7.18e-90 290
MS.gene90387.t1 AT3G17330 40.807 446 213 13 116 547 35 443 7.18e-90 290
MS.gene90387.t1 AT3G17330 57.965 226 92 1 325 547 116 341 8.88e-90 286
MS.gene90387.t1 AT3G13460 51.203 291 115 6 287 557 338 621 1.21e-89 291
MS.gene90387.t1 AT3G13460 51.203 291 115 6 287 557 337 620 1.27e-89 291
MS.gene90387.t1 AT3G13460 51.203 291 115 6 287 557 335 618 1.28e-89 291
MS.gene90387.t1 AT1G09810 57.391 230 97 1 317 546 175 403 1.70e-85 274
MS.gene90387.t1 AT1G09810 51.799 278 126 4 273 546 111 384 1.71e-85 274
MS.gene90387.t1 AT1G09810 51.799 278 126 4 273 546 88 361 2.20e-85 273
MS.gene90387.t1 AT1G55500 53.307 257 97 4 303 540 268 520 6.08e-85 275
MS.gene90387.t1 AT1G55500 53.307 257 97 4 303 540 311 563 7.66e-85 276
MS.gene90387.t1 AT5G61020 55.274 237 86 4 322 545 197 426 3.02e-84 272
MS.gene90387.t1 AT5G61020 55.274 237 86 4 322 545 199 428 3.36e-84 272
MS.gene90387.t1 AT3G03950 55.357 224 96 1 322 545 190 409 3.26e-81 262
MS.gene90387.t1 AT3G03950 55.357 224 96 1 322 545 189 408 3.45e-81 261
MS.gene90387.t1 AT3G03950 55.357 224 96 1 322 545 193 412 3.48e-81 262
MS.gene90387.t1 AT1G27960 56.250 224 83 3 322 545 215 423 7.30e-79 257
MS.gene90387.t1 AT1G27960 56.250 224 83 3 322 545 289 497 6.44e-78 256
MS.gene90387.t1 AT5G58190 51.429 245 109 5 328 567 275 514 1.34e-76 253
MS.gene90387.t1 AT5G58190 51.429 245 109 5 328 567 274 513 1.38e-76 253
MS.gene90387.t1 AT1G55500 36.542 509 253 15 87 540 40 533 1.35e-75 251
MS.gene90387.t1 AT1G55500 36.542 509 253 15 87 540 83 576 1.48e-75 252
MS.gene90387.t1 AT1G55500 36.542 509 253 15 87 540 83 576 2.43e-75 251
MS.gene90387.t1 AT3G13060 56.075 214 72 4 306 503 316 523 2.28e-71 239
MS.gene90387.t1 AT3G13460 45.783 166 63 6 287 432 338 496 5.62e-29 121
MS.gene90387.t1 AT3G13060 43.357 143 59 4 306 432 316 452 4.29e-25 108
MS.gene90387.t1 AT1G27960 48.214 112 43 3 322 433 289 385 9.30e-20 92.8
MS.gene90387.t1 AT4G11970 30.357 168 82 5 355 503 44 195 2.19e-13 72.4
MS.gene90387.t1 AT4G11970 30.357 168 82 5 355 503 44 195 2.25e-13 72.4
MS.gene90387.t1 AT4G11970 30.357 168 82 5 355 503 44 195 2.28e-13 72.4
MS.gene90387.t1 AT4G11970 30.357 168 82 5 355 503 44 195 4.95e-13 72.0
MS.gene90387.t1 AT4G11970 30.357 168 82 5 355 503 44 195 4.95e-13 72.0

Find 135 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACTTGTTGCTTTCATATT+AGG 0.139929 2.3:+31067596 None:intergenic
TATTCTGCTGGTAGTTATTA+TGG 0.145347 2.3:-31069357 MS.gene90387:CDS
TCAACAAAAGTATGGATTTC+TGG 0.157531 2.3:-31067016 MS.gene90387:CDS
GAAAAGTGCATGATCATATT+TGG 0.231336 2.3:+31067382 None:intergenic
TTAAACTCTGGAGGTAATTC+TGG 0.231621 2.3:-31067470 MS.gene90387:CDS
GTTACCTTGTTTGCTTGTTT+TGG 0.232110 2.3:+31067968 None:intergenic
GAGGCTCGACAATGCATTTC+AGG 0.241866 2.3:-31067276 MS.gene90387:CDS
CCTGGCTATATTTCACCTTA+TGG 0.275162 2.3:-31068235 MS.gene90387:CDS
GTGTCTCTACTATTTGTTAC+AGG 0.280235 2.3:+31066888 None:intergenic
ATGTTGATCTGTCCTGATTT+TGG 0.281400 2.3:+31067424 None:intergenic
AGTGGATTTCAACAAAAGTA+TGG 0.322061 2.3:-31067024 MS.gene90387:CDS
TCATATTTGGTTGGAAAATC+AGG 0.322709 2.3:+31067395 None:intergenic
CGATCTACCACTCGGTTTAC+TGG 0.323936 2.3:+31068129 None:intergenic
TGTATCGAGAACATCGATAT+TGG 0.347303 2.3:-31066701 MS.gene90387:CDS
ATTTCTGGCAGCAAGATAAA+TGG 0.351407 2.3:-31067001 MS.gene90387:CDS
ATATGCCGTAGCTGAGGATT+TGG 0.367053 2.3:+31066936 None:intergenic
AGGGAATCGTTATAATGAAT+TGG 0.374688 2.3:-31068152 MS.gene90387:CDS
CAGTATCAGGTTTACCCTCC+TGG 0.392158 2.3:-31068286 MS.gene90387:CDS
TTTATAATGTGCCATTTGAC+AGG 0.415396 2.3:+31066966 None:intergenic
TCCGTCTTTCAACAACCAAT+TGG 0.421822 2.3:-31068262 MS.gene90387:CDS
CTCTTGCATGACCTTCTGAC+GGG 0.425352 2.3:+31066657 None:intergenic
ATGTTCTTTACAACCAACTT+AGG 0.426914 2.3:+31065890 None:intergenic
TGGTGTCGATGTCCAGTATC+AGG 0.429764 2.3:-31068299 MS.gene90387:CDS
TAGGTCATGCAAGCAGATAA+TGG 0.430474 2.3:-31068388 MS.gene90387:CDS
TCGAGCCTCTTATTGCCATT+AGG 0.430781 2.3:+31067290 None:intergenic
GCGACGGGAAAAGAACCCTT+TGG 0.439928 2.3:+31067674 None:intergenic
AGATCATGTGTATCATCAAT+AGG 0.445206 2.3:-31069450 MS.gene90387:CDS
TTCACTTTCTCAACCAACTT+AGG 0.446586 2.3:+31065860 None:intergenic
ATGGAGAACAGGACCAGAAA+TGG 0.448479 2.3:+31067709 None:intergenic
AGAGCATCAAGTACGATGTA+TGG 0.449332 2.3:-31067322 MS.gene90387:CDS
CAGGAGGGTAAACCTGATAC+TGG 0.449509 2.3:+31068287 None:intergenic
TGTGGAGTAGCCGAGATGAT+TGG 0.450864 2.3:-31067050 MS.gene90387:CDS
TATTATGGATATTACTATCC+AGG 0.456293 2.3:-31069342 MS.gene90387:intron
GTTGAAGAAACATCTAATAT+TGG 0.457075 2.3:+31068010 None:intergenic
TCATCAATAGGAGATGCTTC+TGG 0.457910 2.3:-31069438 MS.gene90387:CDS
CAGAATGTTGCTTATTCTGC+TGG 0.462148 2.3:-31069369 MS.gene90387:CDS
TATGTTAAGGTTTCTTCAAA+GGG 0.467717 2.3:-31069498 MS.gene90387:intron
TCAATGGTGACACCAAAATC+AGG 0.467791 2.3:-31067436 MS.gene90387:CDS
TTATGTCGGCGCTGATGCTA+TGG 0.468389 2.3:-31069016 MS.gene90387:CDS
TCTCTTGCATGACCTTCTGA+CGG 0.475313 2.3:+31066656 None:intergenic
CAACAACCAATTGGATCCCC+TGG 0.475726 2.3:-31068253 MS.gene90387:CDS
ATTGCATCTGAATGGAGAAC+AGG 0.476903 2.3:+31067698 None:intergenic
CAACATTCTGATCAGTGGAT+TGG 0.479321 2.3:+31069382 None:intergenic
TACCGAAAAGAAAAGGAATA+CGG 0.480275 2.3:+31067214 None:intergenic
CCATAAGGTGAAATATAGCC+AGG 0.480961 2.3:+31068235 None:intergenic
GAGTAGCCAGTCTGATATCC+TGG 0.482425 2.3:+31068346 None:intergenic
CCTAGAACAGTTAATGCAAA+AGG 0.482609 2.3:-31067497 MS.gene90387:CDS
GAATCCCATGAGTATGTTGA+TGG 0.482741 2.3:+31068202 None:intergenic
GGTTGTTGAAAGACGGAACC+AGG 0.487017 2.3:+31068268 None:intergenic
CCTTTGGCATTGCATCTGAA+TGG 0.488787 2.3:+31067690 None:intergenic
TTATGTTAAGGTTTCTTCAA+AGG 0.495686 2.3:-31069499 MS.gene90387:intron
TATGGAGAGCAAGAAAATCA+AGG 0.500681 2.3:-31069042 MS.gene90387:CDS
ACGGATATTTCCCTGTCAAA+TGG 0.501338 2.3:-31066977 MS.gene90387:CDS
TACTTTCCTGTGAACACACC+TGG 0.502118 2.3:-31068319 MS.gene90387:CDS
GATAGCATACCGAAAAGAAA+AGG 0.504322 2.3:+31067207 None:intergenic
TATGTAGAAAACTTTGCGAC+GGG 0.505982 2.3:+31067659 None:intergenic
GCAAAAGGTACTTTAAACTC+TGG 0.507406 2.3:-31067482 MS.gene90387:CDS
TCTGGAGATAAGAGTGTCAA+TGG 0.513122 2.3:-31067452 MS.gene90387:CDS
TACTTCCATCAACATACTCA+TGG 0.517546 2.3:-31068207 MS.gene90387:CDS
CACATGCAAGCTTACCATGT+TGG 0.518787 2.3:+31069670 None:intergenic
TCGCAGAGTCGTACTGGCAG+TGG 0.526655 2.3:-31068097 MS.gene90387:CDS
AGTGCATGATCATATTTGGT+TGG 0.527014 2.3:+31067386 None:intergenic
ATATAGCCAGGGGATCCAAT+TGG 0.527493 2.3:+31068247 None:intergenic
CCCTTGTGCTACATCTTGTG+TGG 0.528879 2.3:+31068171 None:intergenic
GTACACCTAATGGCAATAAG+AGG 0.531549 2.3:-31067295 MS.gene90387:CDS
TCTTATGTCTATCTCATGCC+AGG 0.534138 2.3:-31068364 MS.gene90387:CDS
GATGGAAGTAACTCACCATA+AGG 0.536031 2.3:+31068220 None:intergenic
TCCAATTGGTTGTTGAAAGA+CGG 0.536670 2.3:+31068261 None:intergenic
GTATGGGCGAGTACACCTAA+TGG 0.536841 2.3:-31067305 MS.gene90387:CDS
TCACTTAATGAGCAGAATCA+AGG 0.540048 2.3:-31067521 MS.gene90387:CDS
GAACATGGAGGATCCTAAGT+TGG 0.540134 2.3:-31065873 MS.gene90387:CDS
GAACATGGAGGATCCTAAGT+TGG 0.540134 2.3:-31065903 MS.gene90387:CDS
TCGACACCAGGTGTGTTCAC+AGG 0.547002 2.3:+31068313 None:intergenic
CCAGCCAAAACAAGCAAACA+AGG 0.547719 2.3:-31067972 MS.gene90387:intron
CCATTCAGATGCAATGCCAA+AGG 0.548568 2.3:-31067690 MS.gene90387:CDS
CATTCAGATGCAATGCCAAA+GGG 0.552432 2.3:-31067689 MS.gene90387:CDS
CAGAATCGAATGGAAGAGAA+AGG 0.555397 2.3:-31067248 MS.gene90387:CDS
CAAACCTGTACATTGGTATG+TGG 0.555627 2.3:+31066613 None:intergenic
AAGGTTTCTTCAAAGGGTGG+TGG 0.558132 2.3:-31069492 MS.gene90387:CDS
GAGCATCAAGTACGATGTAT+GGG 0.559060 2.3:-31067321 MS.gene90387:CDS
TATGCCACATACCAATGTAC+AGG 0.568570 2.3:-31066617 MS.gene90387:intron
GAGCAACTCATCAGAAGTGA+AGG 0.569571 2.3:-31068041 MS.gene90387:CDS
CATATCAGCTGTAAAGAACA+TGG 0.571245 2.3:-31065918 MS.gene90387:CDS
CTCAGTACTAACCCATCCCT+TGG 0.572036 2.3:+31067574 None:intergenic
TTATAATGTGCCATTTGACA+GGG 0.573430 2.3:+31066967 None:intergenic
GAAGACTTAACAAGTGCACT+TGG 0.574492 2.3:-31065950 MS.gene90387:CDS
AGCAACAAGTACCAAGGGAT+GGG 0.576647 2.3:-31067585 MS.gene90387:CDS
CTCATGCCAGGATATCAGAC+TGG 0.577228 2.3:-31068352 MS.gene90387:CDS
GAAGAAACATCTAATATTGG+TGG 0.577898 2.3:+31068013 None:intergenic
ACCGAAAAGAAAAGGAATAC+GGG 0.578211 2.3:+31067215 None:intergenic
GTTAAGGTTTCTTCAAAGGG+TGG 0.579681 2.3:-31069495 MS.gene90387:intron
GTATGTAGAAAACTTTGCGA+CGG 0.581650 2.3:+31067658 None:intergenic
ACATACAATCAAGGAAAGAG+TGG 0.582689 2.3:-31067641 MS.gene90387:CDS
GCTTGTGATCATTATTCTCG+AGG 0.582868 2.3:+31066910 None:intergenic
ATGAAAGCAACAAGTACCAA+GGG 0.583635 2.3:-31067590 MS.gene90387:CDS
AGCCGAGATGATTGGACGAG+TGG 0.583728 2.3:-31067042 MS.gene90387:CDS
ACTTCCATCAACATACTCAT+GGG 0.589217 2.3:-31068206 MS.gene90387:CDS
ATCCACTCGTCCAATCATCT+CGG 0.591466 2.3:+31067040 None:intergenic
AAGCAACAAGTACCAAGGGA+TGG 0.592367 2.3:-31067586 MS.gene90387:CDS
TGAGTTCAGGTCAACGCTAG+TGG 0.593166 2.3:-31067080 MS.gene90387:intron
ATAAGCAACATTCTGATCAG+TGG 0.595793 2.3:+31069377 None:intergenic
ATATTCCAAATCCTCAGCTA+CGG 0.598835 2.3:-31066941 MS.gene90387:CDS
GTAAAATCAAACCTGTACAT+TGG 0.599665 2.3:+31066606 None:intergenic
GAAAATCAAGGATATTATGT+CGG 0.602073 2.3:-31069030 MS.gene90387:CDS
TGTACATTGGTATGTGGCAT+AGG 0.603452 2.3:+31066619 None:intergenic
TTGAGCATTTCAATACCTTG+CGG 0.609987 2.3:+31066739 None:intergenic
AGAATGATTACAGGTTATGG+TGG 0.612198 2.3:-31069069 MS.gene90387:intron
AAAGGTACTTTAAACTCTGG+AGG 0.617094 2.3:-31067479 MS.gene90387:CDS
TGAGTTGCTCACATTAGATG+AGG 0.617233 2.3:+31068054 None:intergenic
TGATACTGGACATCGACACC+AGG 0.618053 2.3:+31068301 None:intergenic
ATTTGGTTGGAAAATCAGGA+AGG 0.619406 2.3:+31067399 None:intergenic
CATAAGGTGAAATATAGCCA+GGG 0.620198 2.3:+31068236 None:intergenic
ACACATGATCTTGCATCAGA+TGG 0.625382 2.3:+31069462 None:intergenic
TAAGTTGGTTGTAAAGAACA+TGG 0.629871 2.3:-31065888 MS.gene90387:CDS
TATGAAAGCAACAAGTACCA+AGG 0.634095 2.3:-31067591 MS.gene90387:CDS
CATACAATCAAGGAAAGAGT+GGG 0.635967 2.3:-31067640 MS.gene90387:CDS
TCAGGATGCACAGAATCGAA+TGG 0.637168 2.3:-31067258 MS.gene90387:CDS
AGGATAATATGCCGTAGCTG+AGG 0.638343 2.3:+31066930 None:intergenic
ATGAATAAGAAGAAGCTGCA+TGG 0.646230 2.3:-31069722 MS.gene90387:CDS
GAGTTGCTCACATTAGATGA+GGG 0.650819 2.3:+31068055 None:intergenic
TGGCAGCAAGATAAATGGAA+CGG 0.653548 2.3:-31066996 MS.gene90387:CDS
AGCAACTCATCAGAAGTGAA+GGG 0.655536 2.3:-31068040 MS.gene90387:CDS
AAATAGTAGAGACACTCAAG+AGG 0.657180 2.3:-31066880 MS.gene90387:intron
GAAGCTGAAACTCAGAAACA+AGG 0.666505 2.3:-31067552 MS.gene90387:CDS
ACCACACAAGATGTAGCACA+AGG 0.668664 2.3:-31068172 MS.gene90387:CDS
GTTGAAAGACGGAACCAGGA+GGG 0.679018 2.3:+31068272 None:intergenic
GAAAAGATCGATCTACCACT+CGG 0.689012 2.3:+31068121 None:intergenic
ATAAGGTGAAATATAGCCAG+GGG 0.699657 2.3:+31068237 None:intergenic
GTTGAGAAAGTGAATGACTG+AGG 0.708180 2.3:-31065851 None:intergenic
TGAACATAATAATTCCAACA+TGG 0.712248 2.3:-31069684 MS.gene90387:intron
TGTTGAAAGACGGAACCAGG+AGG 0.716372 2.3:+31068271 None:intergenic
GTTGGTTGTAAAGAACATGG+AGG 0.739574 2.3:-31065885 MS.gene90387:CDS
CCACACAAGATGTAGCACAA+GGG 0.750655 2.3:-31068171 MS.gene90387:CDS
ATCAGCTGTAAAGAACATGG+AGG 0.773499 2.3:-31065915 MS.gene90387:CDS
GAATTGGCCAGTAAACCGAG+TGG 0.774424 2.3:-31068136 MS.gene90387:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGACTTCTAAATAAATTAT+TGG + chr2.3:31069501-31069520 None:intergenic 15.0%
!! ATAGTAGAAAAATAAAGAAT+TGG + chr2.3:31069456-31069475 None:intergenic 15.0%
!! ATATAAATGAAAAGTAAAGA+AGG + chr2.3:31069558-31069577 None:intergenic 15.0%
!! CATTTATTAAATATTGTGAA+AGG + chr2.3:31069314-31069333 None:intergenic 15.0%
!! GAAAATAACATGTTAATAAA+AGG - chr2.3:31067111-31067130 MS.gene90387:intron 15.0%
!! TAATTGTAACACAATTAAAA+AGG + chr2.3:31069531-31069550 None:intergenic 15.0%
!! TAGTAGAAAAATAAAGAATT+GGG + chr2.3:31069455-31069474 None:intergenic 15.0%
!! TATAAATGAAAAGTAAAGAA+GGG + chr2.3:31069557-31069576 None:intergenic 15.0%
!!! AATTCTTTATTTTTCTACTA+TGG - chr2.3:31069455-31069474 MS.gene90387:CDS 15.0%
!!! AATTTTTGTTGGTTTTATTT+AGG - chr2.3:31067331-31067350 MS.gene90387:CDS 15.0%
!!! ATGTTTTCTTATTGTATTTT+TGG - chr2.3:31066204-31066223 MS.gene90387:intron 15.0%
!!! GTAAATATCTAAATTTTTGT+TGG - chr2.3:31067320-31067339 MS.gene90387:CDS 15.0%
!!! TCTTTGCTTATATATAATTT+TGG - chr2.3:31069753-31069772 MS.gene90387:intron 15.0%
!!! TTGAATTCTGAAATAAATTT+GGG - chr2.3:31067070-31067089 MS.gene90387:CDS 15.0%
!!! TTTCTCTTTCTAAAATTATA+AGG + chr2.3:31067899-31067918 None:intergenic 15.0%
!!! TTTGAATTCTGAAATAAATT+TGG - chr2.3:31067069-31067088 MS.gene90387:CDS 15.0%
!! AAACAATAGTTAAAACAGAA+CGG + chr2.3:31067806-31067825 None:intergenic 20.0%
!! AATGTCAAAAAAGAATTCAT+TGG + chr2.3:31069231-31069250 None:intergenic 20.0%
!! AGATTATTCTAAATAGTTTG+TGG - chr2.3:31067992-31068011 MS.gene90387:CDS 20.0%
!! ATGAGTAGATTATGAAAATT+TGG + chr2.3:31069588-31069607 None:intergenic 20.0%
!! CAAAAACTAAAGAAATGAAA+GGG + chr2.3:31069725-31069744 None:intergenic 20.0%
!! CAAAGTAATTAATAACTCTT+TGG - chr2.3:31069397-31069416 MS.gene90387:CDS 20.0%
!! TGAGTAGATTATGAAAATTT+GGG + chr2.3:31069587-31069606 None:intergenic 20.0%
!!! ATTTGTTGTATGTTATGTTA+AGG - chr2.3:31066227-31066246 MS.gene90387:intron 20.0%
!!! ATTTTAGAAAGAGAAATAAG+TGG - chr2.3:31067903-31067922 MS.gene90387:intron 20.0%
!!! TCATGATAATTGTGTTATTA+TGG - chr2.3:31066792-31066811 MS.gene90387:intron 20.0%
!!! TGTTCTTCTTGTTTATTTTT+TGG - chr2.3:31065889-31065908 MS.gene90387:CDS 20.0%
!!! TTCTTTTTTGACATTATTGA+TGG - chr2.3:31069236-31069255 MS.gene90387:intron 20.0%
!!! TTTATGTTTTTCCTTTCTTA+CGG - chr2.3:31066645-31066664 MS.gene90387:CDS 20.0%
! AACTATATATTGAACTGTTG+GGG - chr2.3:31067926-31067945 MS.gene90387:intron 25.0%
! AACTCCAAATTATTCCAAAA+AGG + chr2.3:31069368-31069387 None:intergenic 25.0%
! AAGATACAGAAGAAATAACT+AGG + chr2.3:31068931-31068950 None:intergenic 25.0%
! ACTCCAAATTATTCCAAAAA+GGG + chr2.3:31069367-31069386 None:intergenic 25.0%
! ATGAGCAAATAAAACACAAA+CGG + chr2.3:31068590-31068609 None:intergenic 25.0%
! GAAAATCAAGGATATTATGT+CGG - chr2.3:31066708-31066727 MS.gene90387:CDS 25.0%
! GAACTATATATTGAACTGTT+GGG - chr2.3:31067925-31067944 MS.gene90387:intron 25.0%
! GCAAAAACTAAAGAAATGAA+AGG + chr2.3:31069726-31069745 None:intergenic 25.0%
! GTTGAAGAAACATCTAATAT+TGG + chr2.3:31067731-31067750 None:intergenic 25.0%
! TAACATTCAAGGAAAAAATG+TGG - chr2.3:31067213-31067232 MS.gene90387:intron 25.0%
! TAAGCATATATCTTCAGAAA+GGG - chr2.3:31066995-31067014 MS.gene90387:CDS 25.0%
! TATGTTAAGGTTTCTTCAAA+GGG - chr2.3:31066240-31066259 MS.gene90387:intron 25.0%
! TATTATGGATATTACTATCC+AGG - chr2.3:31066396-31066415 MS.gene90387:intron 25.0%
! TATTGCATTACACATGAAAA+TGG - chr2.3:31067143-31067162 MS.gene90387:intron 25.0%
! TCAGATTCAAGTATTTATAC+AGG + chr2.3:31066880-31066899 None:intergenic 25.0%
! TGAACATAATAATTCCAACA+TGG - chr2.3:31066054-31066073 MS.gene90387:intron 25.0%
! TGTAACACAATTAAAAAGGT+GGG + chr2.3:31069527-31069546 None:intergenic 25.0%
! TTAAGCATATATCTTCAGAA+AGG - chr2.3:31066994-31067013 MS.gene90387:CDS 25.0%
! TTAGTAAGAAGTAAGAACTT+TGG + chr2.3:31069178-31069197 None:intergenic 25.0%
! TTATGTTAAGGTTTCTTCAA+AGG - chr2.3:31066239-31066258 MS.gene90387:intron 25.0%
! TTGTAACACAATTAAAAAGG+TGG + chr2.3:31069528-31069547 None:intergenic 25.0%
!! AAGTTTTCTACATACAATCA+AGG - chr2.3:31068088-31068107 MS.gene90387:CDS 25.0%
!! TTTAGAATAGTTTGTCAACT+AGG + chr2.3:31069337-31069356 None:intergenic 25.0%
!!! AAGAAATGAAAGGGTTTTTT+CGG + chr2.3:31069716-31069735 None:intergenic 25.0%
!!! ACTTATTTTTACTCGAAACT+CGG - chr2.3:31069643-31069662 MS.gene90387:intron 25.0%
!!! ATACCCTTTTTGGAATAATT+TGG - chr2.3:31069361-31069380 MS.gene90387:CDS 25.0%
!!! ATTAGGAAAGTTGTTTTGAT+AGG + chr2.3:31068128-31068147 None:intergenic 25.0%
!!! ATTTTTTCCTTGAATGTTAC+AGG + chr2.3:31067212-31067231 None:intergenic 25.0%
!!! TTAGGAAAGTTGTTTTGATA+GGG + chr2.3:31068127-31068146 None:intergenic 25.0%
!!! TTCTGAAATAAATTTGGGAT+TGG - chr2.3:31067075-31067094 MS.gene90387:intron 25.0%
!!! TTTTGATAATTGTTGAGTTC+AGG - chr2.3:31068645-31068664 MS.gene90387:intron 25.0%
!!! TTTTGGAATAATTTGGAGTT+GGG - chr2.3:31069368-31069387 MS.gene90387:CDS 25.0%
!!! TTTTTGGAATAATTTGGAGT+TGG - chr2.3:31069367-31069386 MS.gene90387:CDS 25.0%
AGATCATGTGTATCATCAAT+AGG - chr2.3:31066288-31066307 MS.gene90387:intron 30.0%
AGGGAATCGTTATAATGAAT+TGG - chr2.3:31067586-31067605 MS.gene90387:CDS 30.0%
CAACCACAATTATGCAAAAA+TGG + chr2.3:31069284-31069303 None:intergenic 30.0%
GAAGAAACATCTAATATTGG+TGG + chr2.3:31067728-31067747 None:intergenic 30.0%
GGAACTATATATTGAACTGT+TGG - chr2.3:31067924-31067943 MS.gene90387:intron 30.0%
GTAAAATCAAACCTGTACAT+TGG + chr2.3:31069135-31069154 None:intergenic 30.0%
TAATCATTCTACCGTAAGAA+AGG + chr2.3:31066659-31066678 None:intergenic 30.0%
TACCGAAAAGAAAAGGAATA+CGG + chr2.3:31068527-31068546 None:intergenic 30.0%
TATTCTGCTGGTAGTTATTA+TGG - chr2.3:31066381-31066400 MS.gene90387:intron 30.0%
TCATATTTGGTTGGAAAATC+AGG + chr2.3:31068346-31068365 None:intergenic 30.0%
TGAGCAAATAAAACACAAAC+GGG + chr2.3:31068589-31068608 None:intergenic 30.0%
! AGTGGATTTCAACAAAAGTA+TGG - chr2.3:31068714-31068733 MS.gene90387:intron 30.0%
! ATTGATAACACTGACGAATA+GGG + chr2.3:31066442-31066461 None:intergenic 30.0%
! CATTTTTGCATAATTGTGGT+TGG - chr2.3:31069282-31069301 MS.gene90387:intron 30.0%
! CTGATAATTTGCATTGCATT+AGG - chr2.3:31066896-31066915 MS.gene90387:CDS 30.0%
! GAAAAGTGCATGATCATATT+TGG + chr2.3:31068359-31068378 None:intergenic 30.0%
! TCAACAAAAGTATGGATTTC+TGG - chr2.3:31068722-31068741 MS.gene90387:intron 30.0%
! TCTAAACTTGATACCCTTTT+TGG - chr2.3:31069351-31069370 MS.gene90387:CDS 30.0%
!! AATAGTTTGTGGTGTTTTTC+AGG - chr2.3:31068003-31068022 MS.gene90387:CDS 30.0%
!! AGAACTTTGGAATAAGAACA+AGG + chr2.3:31069165-31069184 None:intergenic 30.0%
!! GTACTTGTTGCTTTCATATT+AGG + chr2.3:31068145-31068164 None:intergenic 30.0%
!! TTATAATGTGCCATTTGACA+GGG + chr2.3:31068774-31068793 None:intergenic 30.0%
!! TTTATAATGTGCCATTTGAC+AGG + chr2.3:31068775-31068794 None:intergenic 30.0%
!!! AATTTGGGATTGGCTAATTT+TGG - chr2.3:31067085-31067104 MS.gene90387:intron 30.0%
!!! TAGGAAAGTTGTTTTGATAG+GGG + chr2.3:31068126-31068145 None:intergenic 30.0%
AAATAGTAGAGACACTCAAG+AGG - chr2.3:31068858-31068877 MS.gene90387:intron 35.0%
AATTGACCAGATATGCAACA+AGG + chr2.3:31066839-31066858 None:intergenic 35.0%
ACATACAATCAAGGAAAGAG+TGG - chr2.3:31068097-31068116 MS.gene90387:CDS 35.0%
ACCGAAAAGAAAAGGAATAC+GGG + chr2.3:31068526-31068545 None:intergenic 35.0%
ACTTCCATCAACATACTCAT+GGG - chr2.3:31067532-31067551 MS.gene90387:CDS 35.0%
AGAATGATTACAGGTTATGG+TGG - chr2.3:31066669-31066688 MS.gene90387:CDS 35.0%
AGTGCATGATCATATTTGGT+TGG + chr2.3:31068355-31068374 None:intergenic 35.0%
ATAAGCAACATTCTGATCAG+TGG + chr2.3:31066364-31066383 None:intergenic 35.0%
ATAAGGTGAAATATAGCCAG+GGG + chr2.3:31067504-31067523 None:intergenic 35.0%
ATATTCCAAATCCTCAGCTA+CGG - chr2.3:31068797-31068816 MS.gene90387:intron 35.0%
ATGAAAGCAACAAGTACCAA+GGG - chr2.3:31068148-31068167 MS.gene90387:CDS 35.0%
ATGAATAAGAAGAAGCTGCA+TGG - chr2.3:31066016-31066035 MS.gene90387:intron 35.0%
ATGGCTGCTGAATTGAAAAA+AGG - chr2.3:31065853-31065872 MS.gene90387:CDS 35.0%
ATTTGGTTGGAAAATCAGGA+AGG + chr2.3:31068342-31068361 None:intergenic 35.0%
CAATAGTTAAAACAGAACGG+AGG + chr2.3:31067803-31067822 None:intergenic 35.0%
CATAAGGTGAAATATAGCCA+GGG + chr2.3:31067505-31067524 None:intergenic 35.0%
CATACAATCAAGGAAAGAGT+GGG - chr2.3:31068098-31068117 MS.gene90387:CDS 35.0%
CATATCAGCTGTAAAGAACA+TGG - chr2.3:31069820-31069839 MS.gene90387:intron 35.0%
CCTAGAACAGTTAATGCAAA+AGG - chr2.3:31068241-31068260 MS.gene90387:CDS 35.0%
CTCACAACAACATGAAACAA+TGG + chr2.3:31066942-31066961 None:intergenic 35.0%
GATAGCATACCGAAAAGAAA+AGG + chr2.3:31068534-31068553 None:intergenic 35.0%
GGTAGAATGATTACAGGTTA+TGG - chr2.3:31066666-31066685 MS.gene90387:CDS 35.0%
GTATGTAGAAAACTTTGCGA+CGG + chr2.3:31068083-31068102 None:intergenic 35.0%
TACTTCCATCAACATACTCA+TGG - chr2.3:31067531-31067550 MS.gene90387:CDS 35.0%
TATGAAAGCAACAAGTACCA+AGG - chr2.3:31068147-31068166 MS.gene90387:CDS 35.0%
TATGGAGAGCAAGAAAATCA+AGG - chr2.3:31066696-31066715 MS.gene90387:CDS 35.0%
TATGTAGAAAACTTTGCGAC+GGG + chr2.3:31068082-31068101 None:intergenic 35.0%
TCACTTAATGAGCAGAATCA+AGG - chr2.3:31068217-31068236 MS.gene90387:CDS 35.0%
TCCAATTGGTTGTTGAAAGA+CGG + chr2.3:31067480-31067499 None:intergenic 35.0%
TCTTACGGTAGAATGATTAC+AGG - chr2.3:31066660-31066679 MS.gene90387:CDS 35.0%
TGTATCGAGAACATCGATAT+TGG - chr2.3:31069037-31069056 MS.gene90387:CDS 35.0%
TTAGACAGCGACAAATAAAC+AGG + chr2.3:31067834-31067853 None:intergenic 35.0%
TTCACTTTCTCAACCAACTT+AGG + chr2.3:31069881-31069900 None:intergenic 35.0%
TTGAGCATTTCAATACCTTG+CGG + chr2.3:31069002-31069021 None:intergenic 35.0%
! AAGTTTCTTGAGCTGGTTTA+TGG - chr2.3:31066761-31066780 MS.gene90387:intron 35.0%
! ATGTTGATCTGTCCTGATTT+TGG + chr2.3:31068317-31068336 None:intergenic 35.0%
! CCTTTTGCATTAACTGTTCT+AGG + chr2.3:31068244-31068263 None:intergenic 35.0%
! GATTGATAACACTGACGAAT+AGG + chr2.3:31066443-31066462 None:intergenic 35.0%
! GTGTCTCTACTATTTGTTAC+AGG + chr2.3:31068853-31068872 None:intergenic 35.0%
! TCCCGTATTCCTTTTCTTTT+CGG - chr2.3:31068522-31068541 MS.gene90387:intron 35.0%
! TTAAACTCTGGAGGTAATTC+TGG - chr2.3:31068268-31068287 MS.gene90387:CDS 35.0%
! TTTTGCATAATTGTGGTTGG+AGG - chr2.3:31069285-31069304 MS.gene90387:intron 35.0%
!! AAAGGTACTTTAAACTCTGG+AGG - chr2.3:31068259-31068278 MS.gene90387:CDS 35.0%
!! ATTTCTGGCAGCAAGATAAA+TGG - chr2.3:31068737-31068756 MS.gene90387:intron 35.0%
!! CTATGGTTGATGTGTTCTTT+TGG - chr2.3:31069472-31069491 MS.gene90387:CDS 35.0%
!! GCAAAAGGTACTTTAAACTC+TGG - chr2.3:31068256-31068275 MS.gene90387:CDS 35.0%
!! GGACCATTTTTGCATAATTG+TGG - chr2.3:31069278-31069297 MS.gene90387:intron 35.0%
!! GTTACCTTGTTTGCTTGTTT+TGG + chr2.3:31067773-31067792 None:intergenic 35.0%
!!! AATGAAAGGGTTTTTTCGGT+TGG + chr2.3:31069712-31069731 None:intergenic 35.0%
!!! ACAGGTTATGGTGGATTTTA+TGG - chr2.3:31066678-31066697 MS.gene90387:CDS 35.0%
!!! GCTTCTGGTAGTTTTAAAGA+AGG - chr2.3:31066315-31066334 MS.gene90387:intron 35.0%
!!! TTTTTTCGGTTGGACTAGTT+TGG + chr2.3:31069702-31069721 None:intergenic 35.0%
AAAACAGAACGGAGGAAGTA+AGG + chr2.3:31067795-31067814 None:intergenic 40.0%
AACCAGCTCAAGAAACTTAC+AGG + chr2.3:31066759-31066778 None:intergenic 40.0%
ACACATGATCTTGCATCAGA+TGG + chr2.3:31066279-31066298 None:intergenic 40.0%
ACGGATATTTCCCTGTCAAA+TGG - chr2.3:31068761-31068780 MS.gene90387:intron 40.0%
AGCAACTCATCAGAAGTGAA+GGG - chr2.3:31067698-31067717 MS.gene90387:CDS 40.0%
ATCAGCTGTAAAGAACATGG+AGG - chr2.3:31069823-31069842 MS.gene90387:intron 40.0%
ATCCTGTAAGTTTCTTGAGC+TGG - chr2.3:31066754-31066773 MS.gene90387:intron 40.0%
ATTGCATCTGAATGGAGAAC+AGG + chr2.3:31068043-31068062 None:intergenic 40.0%
CAAACCTGTACATTGGTATG+TGG + chr2.3:31069128-31069147 None:intergenic 40.0%
CAACATTCTGATCAGTGGAT+TGG + chr2.3:31066359-31066378 None:intergenic 40.0%
CAGAATCGAATGGAAGAGAA+AGG - chr2.3:31068490-31068509 MS.gene90387:intron 40.0%
CATTCAGATGCAATGCCAAA+GGG - chr2.3:31068049-31068068 MS.gene90387:CDS 40.0%
CCATAAGGTGAAATATAGCC+AGG + chr2.3:31067506-31067525 None:intergenic 40.0%
CCTGGCTATATTTCACCTTA+TGG - chr2.3:31067503-31067522 MS.gene90387:CDS 40.0%
CTCTGTTCTGTTAAGACCTA+CGG - chr2.3:31068563-31068582 MS.gene90387:intron 40.0%
CTGATGTCCTGTAACATTCA+AGG - chr2.3:31067202-31067221 MS.gene90387:intron 40.0%
GAAAAGATCGATCTACCACT+CGG + chr2.3:31067620-31067639 None:intergenic 40.0%
GAAGACTTAACAAGTGCACT+TGG - chr2.3:31069788-31069807 MS.gene90387:intron 40.0%
GAAGCTGAAACTCAGAAACA+AGG - chr2.3:31068186-31068205 MS.gene90387:CDS 40.0%
GAATCCCATGAGTATGTTGA+TGG + chr2.3:31067539-31067558 None:intergenic 40.0%
GAGCATCAAGTACGATGTAT+GGG - chr2.3:31068417-31068436 MS.gene90387:intron 40.0%
GAGTTGCTCACATTAGATGA+GGG + chr2.3:31067686-31067705 None:intergenic 40.0%
GATGGAAGTAACTCACCATA+AGG + chr2.3:31067521-31067540 None:intergenic 40.0%
GCTTGTGATCATTATTCTCG+AGG + chr2.3:31068831-31068850 None:intergenic 40.0%
GTACACCTAATGGCAATAAG+AGG - chr2.3:31068443-31068462 MS.gene90387:intron 40.0%
GTTAAGGTTTCTTCAAAGGG+TGG - chr2.3:31066243-31066262 MS.gene90387:intron 40.0%
GTTGGTTGTAAAGAACATGG+AGG - chr2.3:31069853-31069872 MS.gene90387:intron 40.0%
TACCTTGCGGAAAATGAATC+TGG + chr2.3:31068989-31069008 None:intergenic 40.0%
TAGGTCATGCAAGCAGATAA+TGG - chr2.3:31067350-31067369 MS.gene90387:CDS 40.0%
TATGCCACATACCAATGTAC+AGG - chr2.3:31069121-31069140 MS.gene90387:intron 40.0%
TCAATGGTGACACCAAAATC+AGG - chr2.3:31068302-31068321 MS.gene90387:CDS 40.0%
TCATCAATAGGAGATGCTTC+TGG - chr2.3:31066300-31066319 MS.gene90387:intron 40.0%
TCCGTCTTTCAACAACCAAT+TGG - chr2.3:31067476-31067495 MS.gene90387:CDS 40.0%
TCTTATGTCTATCTCATGCC+AGG - chr2.3:31067374-31067393 MS.gene90387:CDS 40.0%
TGAGTTGCTCACATTAGATG+AGG + chr2.3:31067687-31067706 None:intergenic 40.0%
TGGCAGCAAGATAAATGGAA+CGG - chr2.3:31068742-31068761 MS.gene90387:intron 40.0%
TGTACATTGGTATGTGGCAT+AGG + chr2.3:31069122-31069141 None:intergenic 40.0%
TTTGTTCAGATTCCGCTATG+CGG - chr2.3:31066565-31066584 MS.gene90387:intron 40.0%
! AACGCTAGTGGTCAATTTTG+TGG - chr2.3:31068670-31068689 MS.gene90387:intron 40.0%
! AGAGCATCAAGTACGATGTA+TGG - chr2.3:31068416-31068435 MS.gene90387:intron 40.0%
! CAGAATGTTGCTTATTCTGC+TGG - chr2.3:31066369-31066388 MS.gene90387:intron 40.0%
! TAGTTGCCTTGTTGCATATC+TGG - chr2.3:31066830-31066849 MS.gene90387:intron 40.0%
! TTCCAGATTCATTTTCCGCA+AGG - chr2.3:31068984-31069003 MS.gene90387:intron 40.0%
! TTTTTACGAAACCCGTCAGA+AGG - chr2.3:31069070-31069089 MS.gene90387:intron 40.0%
!! TCTGGAGATAAGAGTGTCAA+TGG - chr2.3:31068286-31068305 MS.gene90387:CDS 40.0%
!!! GTTTTTCAGGCATCCATTTC+TGG - chr2.3:31068016-31068035 MS.gene90387:CDS 40.0%
AAGCAACAAGTACCAAGGGA+TGG - chr2.3:31068152-31068171 MS.gene90387:CDS 45.0%
AAGGTTTCTTCAAAGGGTGG+TGG - chr2.3:31066246-31066265 MS.gene90387:intron 45.0%
ACATTAACGCTACCGCATAG+CGG + chr2.3:31066580-31066599 None:intergenic 45.0%
ACCACACAAGATGTAGCACA+AGG - chr2.3:31067566-31067585 MS.gene90387:CDS 45.0%
ACTGACGAATAGGGAACCAT+GGG + chr2.3:31066433-31066452 None:intergenic 45.0%
AGCAACAAGTACCAAGGGAT+GGG - chr2.3:31068153-31068172 MS.gene90387:CDS 45.0%
AGGACATCAGAGATGATGTC+GGG + chr2.3:31067192-31067211 None:intergenic 45.0%
AGGATAATATGCCGTAGCTG+AGG + chr2.3:31068811-31068830 None:intergenic 45.0%
ATAAAACACAAACGGGCCGT+AGG + chr2.3:31068582-31068601 None:intergenic 45.0%
ATATAGCCAGGGGATCCAAT+TGG + chr2.3:31067494-31067513 None:intergenic 45.0%
ATATGCCGTAGCTGAGGATT+TGG + chr2.3:31068805-31068824 None:intergenic 45.0%
ATCCACTCGTCCAATCATCT+CGG + chr2.3:31068701-31068720 None:intergenic 45.0%
ATGGAGAACAGGACCAGAAA+TGG + chr2.3:31068032-31068051 None:intergenic 45.0%
CACATGCAAGCTTACCATGT+TGG + chr2.3:31066071-31066090 None:intergenic 45.0%
CAGGACATCAGAGATGATGT+CGG + chr2.3:31067193-31067212 None:intergenic 45.0%
CCACACAAGATGTAGCACAA+GGG - chr2.3:31067567-31067586 MS.gene90387:CDS 45.0%
CCAGCCAAAACAAGCAAACA+AGG - chr2.3:31067766-31067785 MS.gene90387:intron 45.0%
CCATTCAGATGCAATGCCAA+AGG - chr2.3:31068048-31068067 MS.gene90387:CDS 45.0%
CCTTTGGCATTGCATCTGAA+TGG + chr2.3:31068051-31068070 None:intergenic 45.0%
GAACATGGAGGATCCTAAGT+TGG - chr2.3:31069835-31069854 MS.gene90387:intron 45.0%
GAGCAACTCATCAGAAGTGA+AGG - chr2.3:31067697-31067716 MS.gene90387:CDS 45.0%
GGATGAGTGCATGTGATTGT+GGG - chr2.3:31069257-31069276 MS.gene90387:intron 45.0%
TACTTTCCTGTGAACACACC+TGG - chr2.3:31067419-31067438 MS.gene90387:CDS 45.0%
TCAGGATGCACAGAATCGAA+TGG - chr2.3:31068480-31068499 MS.gene90387:intron 45.0%
TCGAGCCTCTTATTGCCATT+AGG + chr2.3:31068451-31068470 None:intergenic 45.0%
TCTCTTGCATGACCTTCTGA+CGG + chr2.3:31069085-31069104 None:intergenic 45.0%
TGAACTGTTGGGGATTTCGT+AGG - chr2.3:31067936-31067955 MS.gene90387:intron 45.0%
TGGATGAGTGCATGTGATTG+TGG - chr2.3:31069256-31069275 MS.gene90387:intron 45.0%
! TTTTCTTCGCAGAGTCGTAC+TGG - chr2.3:31067635-31067654 MS.gene90387:CDS 45.0%
!!! CCTTGTTTGCTTGTTTTGGC+TGG + chr2.3:31067769-31067788 None:intergenic 45.0%
!!! TTTATTTTTTTTATATTTTG+CGG - chr2.3:31066118-31066137 MS.gene90387:intron 5.0%
ACGAATAGGGAACCATGGGA+GGG + chr2.3:31066429-31066448 None:intergenic 50.0%
CAACAACCAATTGGATCCCC+TGG - chr2.3:31067485-31067504 MS.gene90387:CDS 50.0%
CACTGACGAATAGGGAACCA+TGG + chr2.3:31066434-31066453 None:intergenic 50.0%
CAGGAGGGTAAACCTGATAC+TGG + chr2.3:31067454-31067473 None:intergenic 50.0%
CAGTATCAGGTTTACCCTCC+TGG - chr2.3:31067452-31067471 MS.gene90387:CDS 50.0%
CCCTTGTGCTACATCTTGTG+TGG + chr2.3:31067570-31067589 None:intergenic 50.0%
CGATCTACCACTCGGTTTAC+TGG + chr2.3:31067612-31067631 None:intergenic 50.0%
CTCAGTACTAACCCATCCCT+TGG + chr2.3:31068167-31068186 None:intergenic 50.0%
CTCATGCCAGGATATCAGAC+TGG - chr2.3:31067386-31067405 MS.gene90387:CDS 50.0%
CTCTTGCATGACCTTCTGAC+GGG + chr2.3:31069084-31069103 None:intergenic 50.0%
GAATTGGCCAGTAAACCGAG+TGG - chr2.3:31067602-31067621 MS.gene90387:CDS 50.0%
GAGGCTCGACAATGCATTTC+AGG - chr2.3:31068462-31068481 MS.gene90387:intron 50.0%
GAGTAGCCAGTCTGATATCC+TGG + chr2.3:31067395-31067414 None:intergenic 50.0%
GCTATGCGGTAGCGTTAATG+TGG - chr2.3:31066579-31066598 MS.gene90387:intron 50.0%
GGTTGTTGAAAGACGGAACC+AGG + chr2.3:31067473-31067492 None:intergenic 50.0%
GTATGGGCGAGTACACCTAA+TGG - chr2.3:31068433-31068452 MS.gene90387:intron 50.0%
GTTGAAAGACGGAACCAGGA+GGG + chr2.3:31067469-31067488 None:intergenic 50.0%
TGAGTTCAGGTCAACGCTAG+TGG - chr2.3:31068658-31068677 MS.gene90387:intron 50.0%
TGATACTGGACATCGACACC+AGG + chr2.3:31067440-31067459 None:intergenic 50.0%
TGTGGAGTAGCCGAGATGAT+TGG - chr2.3:31068688-31068707 MS.gene90387:intron 50.0%
TGTTGAAAGACGGAACCAGG+AGG + chr2.3:31067470-31067489 None:intergenic 50.0%
!! TGGTGTCGATGTCCAGTATC+AGG - chr2.3:31067439-31067458 MS.gene90387:CDS 50.0%
!! TTATGTCGGCGCTGATGCTA+TGG - chr2.3:31066722-31066741 MS.gene90387:CDS 50.0%
AGCCGAGATGATTGGACGAG+TGG - chr2.3:31068696-31068715 MS.gene90387:intron 55.0%
GACGAATAGGGAACCATGGG+AGG + chr2.3:31066430-31066449 None:intergenic 55.0%
GCGACGGGAAAAGAACCCTT+TGG + chr2.3:31068067-31068086 None:intergenic 55.0%
TCGACACCAGGTGTGTTCAC+AGG + chr2.3:31067428-31067447 None:intergenic 55.0%
CCATGGGAGGGAAGCTAACC+TGG + chr2.3:31066417-31066436 None:intergenic 60.0%
! TCGCAGAGTCGTACTGGCAG+TGG - chr2.3:31067641-31067660 MS.gene90387:CDS 60.0%
!! CCAGGTTAGCTTCCCTCCCA+TGG - chr2.3:31066414-31066433 MS.gene90387:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 31065853 31069907 31065853 ID=MS.gene90387
chr2.3 mRNA 31065853 31069907 31065853 ID=MS.gene90387.t1;Parent=MS.gene90387
chr2.3 exon 31069886 31069907 31069886 ID=MS.gene90387.t1.exon1;Parent=MS.gene90387.t1
chr2.3 CDS 31069886 31069907 31069886 ID=cds.MS.gene90387.t1;Parent=MS.gene90387.t1
chr2.3 exon 31069685 31069755 31069685 ID=MS.gene90387.t1.exon2;Parent=MS.gene90387.t1
chr2.3 CDS 31069685 31069755 31069685 ID=cds.MS.gene90387.t1;Parent=MS.gene90387.t1
chr2.3 exon 31069343 31069511 31069343 ID=MS.gene90387.t1.exon3;Parent=MS.gene90387.t1
chr2.3 CDS 31069343 31069511 31069343 ID=cds.MS.gene90387.t1;Parent=MS.gene90387.t1
chr2.3 exon 31069002 31069078 31069002 ID=MS.gene90387.t1.exon4;Parent=MS.gene90387.t1
chr2.3 CDS 31069002 31069078 31069002 ID=cds.MS.gene90387.t1;Parent=MS.gene90387.t1
chr2.3 exon 31067973 31068407 31067973 ID=MS.gene90387.t1.exon5;Parent=MS.gene90387.t1
chr2.3 CDS 31067973 31068407 31067973 ID=cds.MS.gene90387.t1;Parent=MS.gene90387.t1
chr2.3 exon 31067217 31067735 31067217 ID=MS.gene90387.t1.exon6;Parent=MS.gene90387.t1
chr2.3 CDS 31067217 31067735 31067217 ID=cds.MS.gene90387.t1;Parent=MS.gene90387.t1
chr2.3 exon 31066881 31067093 31066881 ID=MS.gene90387.t1.exon7;Parent=MS.gene90387.t1
chr2.3 CDS 31066881 31067093 31066881 ID=cds.MS.gene90387.t1;Parent=MS.gene90387.t1
chr2.3 exon 31066618 31066770 31066618 ID=MS.gene90387.t1.exon8;Parent=MS.gene90387.t1
chr2.3 CDS 31066618 31066770 31066618 ID=cds.MS.gene90387.t1;Parent=MS.gene90387.t1
chr2.3 exon 31065853 31065978 31065853 ID=MS.gene90387.t1.exon9;Parent=MS.gene90387.t1
chr2.3 CDS 31065853 31065978 31065853 ID=cds.MS.gene90387.t1;Parent=MS.gene90387.t1
Gene Sequence

>MS.gene90387

ATGGCTGCTGAATTGAAAAAAGGTATTTGTTTTCTTTGTTCTTCTTGTTTATTTTTTGGTTTAGATTTAAATTTTATTTCAATTTGATTATGATTTGAATATTTTGATTTTTTTTTTAATAAAAATGAGATTTTTACTGTGTTTTTTTACAGCTGCAGATGAAATGAATAAGAAGAAGCTGCATGGTGATTCTTCAACAGCTGAACATAATAATTCCAACATGGTAAGCTTGCATGTGATTTCTAAATTTTTATTTTATTTTTGTTTTATTTTTTTTATATTTTGCGGCTTAATTTTGAATTTTGAAATTAACTGTTTCATTAGTTATATGCATGAAACTTGAAGAATTACATGTTTTCTTATTGTATTTTTGGATTTGTTGTATGTTATGTTAAGGTTTCTTCAAAGGGTGGTGGAAGTTCACCATCTGATGCAAGATCATGTGTATCATCAATAGGAGATGCTTCTGGTAGTTTTAAAGAAGGCGATGTTGATCATGAATTCCAATCCACTGATCAGAATGTTGCTTATTCTGCTGGTAGTTATTATGGATATTACTATCCAGGTTAGCTTCCCTCCCATGGTTCCCTATTCGTCAGTGTTATCAATCGCAGATCGCAGAAACTAGCAGTTTGTTCAAATTATGATATGCTATATCACAGTTGTTGATGCTATTTGACAACAGTTTGTTTAAAATAGAGAACAGTAGCGATTTGTTCAGATTCCGCTATGCGGTAGCGTTAATGTGGCTGCTATTTGACAACACTGCTATTCGTTTATGTTGATTGTATATTTATGTTTTTCCTTTCTTACGGTAGAATGATTACAGGTTATGGTGGATTTTATGGAGAGCAAGAAAATCAAGGATATTATGTCGGCGCTGATGCTATGGATTTTCAGTATCCTGTAAGTTTCTTGAGCTGGTTTATGGTTTTTTTGTCATGATAATTGTGTTATTATGGTTCAGTCTTTCTATGTAGTTGCCTTGTTGCATATCTGGTCAATTCAGTCTATGCATTTGATGCCTGTATAAATACTTGAATCTGATAATTTGCATTGCATTAGGCAAGTCTTTAGAATCATATTCCATTGTTTCATGTTGTTGTGAGAAACATGCATGTGTCTCAAAGAATCGTATTCTTTAAGCATATATCTTCAGAAAGGGTTGAATAGAAAATAAAACTGTAATGATGATGTATAATGTTTTTTAGCACATTTTGAATTCTGAAATAAATTTGGGATTGGCTAATTTTGGCTTGAAAATAACATGTTAATAAAAGGCTTCATTCATATTGCATTACACATGAAAATGGTTAATATTTTAAACTACTATTTACCCGACATCATCTCTGATGTCCTGTAACATTCAAGGAAAAAATGTGGCTAGTAAATATGATTTTATGAAATGATAAGAATTCATTATGCAGACATATACTTGATCTCTCATATGTTCTACAACATATATATGTAAATATCTAAATTTTTGTTGGTTTTATTTAGGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCATGCCAGGATATCAGACTGGCTACTCTTCATACTTTCCTGTGAACACACCTGGTGTCGATGTCCAGTATCAGGTTTACCCTCCTGGTTCCGTCTTTCAACAACCAATTGGATCCCCTGGCTATATTTCACCTTATGGTGAGTTACTTCCATCAACATACTCATGGGATTCATCTTTAACCACACAAGATGTAGCACAAGGGAATCGTTATAATGAATTGGCCAGTAAACCGAGTGGTAGATCGATCTTTTCTTCGCAGAGTCGTACTGGCAGTGGTATTGTGTCAAAGTCTGTGCCCTCATCTAATGTGAGCAACTCATCAGAAGTGAAGGGTTTGCCACCAATATTAGATGTTTCTTCAACACATGTTAAGCGCAACCAGCCAAAACAAGCAAACAAGGTAACCTTACTTCCTCCGTTCTGTTTTAACTATTGTTTTTGTTCCTGTTTATTTGTCGCTGTCTAAGTTCAATGCAATATTAACTATTGTTTTTTCGATATATGCTTACCTTATAATTTTAGAAAGAGAAATAAGTGGAACTATATATTGAACTGTTGGGGATTTCGTAGGAAAACAACAAATAATTTCATCAAAAGTTAAATTAGATTATTCTAAATAGTTTGTGGTGTTTTTCAGGCATCCATTTCTGGTCCTGTTCTCCATTCAGATGCAATGCCAAAGGGTTCTTTTCCCGTCGCAAAGTTTTCTACATACAATCAAGGAAAGAGTGGGTTCCCCTATCAAAACAACTTTCCTAATATGAAAGCAACAAGTACCAAGGGATGGGTTAGTACTGAGAAGCTGAAACTCAGAAACAAGGTTAATGATTCACTTAATGAGCAGAATCAAGGTCCTAGAACAGTTAATGCAAAAGGTACTTTAAACTCTGGAGGTAATTCTGGAGATAAGAGTGTCAATGGTGACACCAAAATCAGGACAGATCAACATAACCTTCCTGATTTTCCAACCAAATATGATCATGCACTTTTCTTCGTCATTAAATCGTACAGTGAAGATGATGTTCATAAGAGCATCAAGTACGATGTATGGGCGAGTACACCTAATGGCAATAAGAGGCTCGACAATGCATTTCAGGATGCACAGAATCGAATGGAAGAGAAAGGAAGCATGTGTCCCGTATTCCTTTTCTTTTCGGTATGCTATCAAGTTCAATCTCTGTTCTGTTAAGACCTACGGCCCGTTTGTGTTTTATTTGCTCATTTATTTATCTTAGAAAAATACGACTCACATCAGTGTTTTGATAATTGTTGAGTTCAGGTCAACGCTAGTGGTCAATTTTGTGGAGTAGCCGAGATGATTGGACGAGTGGATTTCAACAAAAGTATGGATTTCTGGCAGCAAGATAAATGGAACGGATATTTCCCTGTCAAATGGCACATTATAAAAGATATTCCAAATCCTCAGCTACGGCATATTATCCTCGAGAATAATGATCACAAGCCTGTAACAAATAGTAGAGACACTCAAGAGGTTTGCATTTTTTTAACATTCTATTAAAGCAACTGTTTACAGAAATGTCCTAGTTATTTCTTCTGTATCTTCACTATTGTGTTAATTGTGTTAATGTTTCGACTTTCCAGATTCATTTTCCGCAAGGTATTGAAATGCTCAACATTTTCAAAAACTATGTATCGAGAACATCGATATTGGATGATTTTGATTTTTACGAAACCCGTCAGAAGGTCATGCAAGAGAAGAAAATAAGACAACCTATGCCACATACCAATGTACAGGTTTGATTTTACACTTGTACCTTGTTCTTATTCCAAAGTTCTTACTTCTTACTAATGATAGCACTAGCACTAGCACATATTGATTCCAATGAATTCTTTTTTGACATTATTGATGGATGAGTGCATGTGATTGTGGGACCATTTTTGCATAATTGTGGTTGGAGGAATCCTTTCACAATATTTAATAAATGCCTAGTTGACAAACTATTCTAAACTTGATACCCTTTTTGGAATAATTTGGAGTTGGGAAATCTCAAAGTAATTAATAACTCTTTGGAGCATGTTCTTTTATTTATCTCTTTTGTATTTCCCAATTCTTTATTTTTCTACTATGGTTGATGTGTTCTTTTGGTGTCCAATAATTTATTTAGAAGTCTTAGACCCACCTTTTTAATTGTGTTACAATTATGTCCCTTCTTTACTTTTCATTTATATAAAACTCCCAAATTTTCATAATCTACTCATAATTTTCACACATTTAATCAGCTAAGTTTTTTTACACTTATTTTTACTCGAAACTCGGCAAAACAATTCAAGACTAATAGTTGTGCATAGTCCAAACTAGTCCAACCGAAAAAACCCTTTCATTTCTTTAGTTTTTGCTTTGATCTCTTTGCTTATATATAATTTTGGTTGCAGCATATAGAAGACTTAACAAGTGCACTTGGATCAGTAGACATATCAGCTGTAAAGAACATGGAGGATCCTAAGTTGGTTGTAAAGAACATGGAGGATCCTAAGTTGGTTGAGAAAGTGAATGACTGA
Protein sequence

>MS.gene90387.t1

MAAELKKAADEMNKKKLHGDSSTAEHNNSNMVSSKGGGSSPSDARSCVSSIGDASGSFKEGDVDHEFQSTDQNVAYSAGSYYGYYYPGYGGFYGEQENQGYYVGADAMDFQYPVMQADNGSYVYLMPGYQTGYSSYFPVNTPGVDVQYQVYPPGSVFQQPIGSPGYISPYGELLPSTYSWDSSLTTQDVAQGNRYNELASKPSGRSIFSSQSRTGSGIVSKSVPSSNVSNSSEVKGLPPILDVSSTHVKRNQPKQANKASISGPVLHSDAMPKGSFPVAKFSTYNQGKSGFPYQNNFPNMKATSTKGWVSTEKLKLRNKVNDSLNEQNQGPRTVNAKGTLNSGGNSGDKSVNGDTKIRTDQHNLPDFPTKYDHALFFVIKSYSEDDVHKSIKYDVWASTPNGNKRLDNAFQDAQNRMEEKGSMCPVFLFFSVNASGQFCGVAEMIGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDIPNPQLRHIILENNDHKPVTNSRDTQEIHFPQGIEMLNIFKNYVSRTSILDDFDFYETRQKVMQEKKIRQPMPHTNVQHIEDLTSALGSVDISAVKNMEDPKLVVKNMEDPKLVEKVND