Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071540.t1 | XP_003595919.1 | 96 | 578 | 11 | 1 | 1 | 566 | 1 | 578 | 2.2e-309 | 1070.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071540.t1 | Q9LJE5 | 39.2 | 485 | 244 | 14 | 79 | 532 | 144 | 608 | 2.3e-73 | 278.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071540.t1 | G7IT77 | 96.0 | 578 | 11 | 1 | 1 | 566 | 1 | 578 | 1.6e-309 | 1070.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04991 | MS.gene071540 | -0.822729 | 2.03E-53 | -1.69E-46 |
MS.gene051122 | MS.gene071540 | 0.837625 | 4.66E-57 | -1.69E-46 |
MS.gene055505 | MS.gene071540 | 0.837997 | 3.73E-57 | -1.69E-46 |
MS.gene055701 | MS.gene071540 | 0.836803 | 7.55E-57 | -1.69E-46 |
MS.gene05761 | MS.gene071540 | 0.820604 | 6.28E-53 | -1.69E-46 |
MS.gene058503 | MS.gene071540 | 0.805813 | 1.11E-49 | -1.69E-46 |
MS.gene060010 | MS.gene071540 | 0.816614 | 5.05E-52 | -1.69E-46 |
MS.gene060850 | MS.gene071540 | 0.841789 | 3.84E-58 | -1.69E-46 |
MS.gene060851 | MS.gene071540 | 0.853811 | 1.87E-61 | -1.69E-46 |
MS.gene060852 | MS.gene071540 | 0.855401 | 6.47E-62 | -1.69E-46 |
MS.gene06121 | MS.gene071540 | 0.802113 | 6.54E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene071540 | MS.gene55918 | PPI |
MS.gene071540 | MS.gene67868 | PPI |
MS.gene68609 | MS.gene071540 | PPI |
MS.gene26804 | MS.gene071540 | PPI |
MS.gene030136 | MS.gene071540 | PPI |
MS.gene058307 | MS.gene071540 | PPI |
MS.gene071540 | MS.gene00083 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071540.t1 | MTR_2g063460 | 94.108 | 594 | 13 | 2 | 1 | 582 | 1 | 584 | 0.0 | 1071 |
MS.gene071540.t1 | MTR_2g063460 | 93.771 | 594 | 13 | 3 | 1 | 582 | 1 | 582 | 0.0 | 1062 |
MS.gene071540.t1 | MTR_4g123630 | 43.333 | 510 | 230 | 14 | 70 | 535 | 11 | 505 | 1.98e-105 | 331 |
MS.gene071540.t1 | MTR_2g032660 | 42.553 | 517 | 217 | 19 | 70 | 532 | 46 | 536 | 4.18e-103 | 327 |
MS.gene071540.t1 | MTR_4g005110 | 64.783 | 230 | 75 | 2 | 306 | 533 | 337 | 562 | 1.31e-95 | 305 |
MS.gene071540.t1 | MTR_8g088390 | 50.502 | 299 | 116 | 8 | 264 | 536 | 234 | 526 | 5.17e-85 | 276 |
MS.gene071540.t1 | MTR_8g088390 | 50.502 | 299 | 116 | 8 | 264 | 536 | 299 | 591 | 9.40e-85 | 278 |
MS.gene071540.t1 | MTR_2g005840 | 62.842 | 183 | 68 | 0 | 348 | 530 | 237 | 419 | 7.47e-83 | 267 |
MS.gene071540.t1 | MTR_2g005840 | 62.842 | 183 | 68 | 0 | 348 | 530 | 268 | 450 | 2.99e-82 | 267 |
MS.gene071540.t1 | MTR_7g085500 | 57.820 | 211 | 79 | 2 | 345 | 555 | 415 | 615 | 7.21e-80 | 265 |
MS.gene071540.t1 | MTR_6g032970 | 52.033 | 246 | 88 | 5 | 310 | 535 | 336 | 571 | 3.06e-77 | 257 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071540.t1 | AT1G79270 | 45.588 | 476 | 209 | 11 | 91 | 556 | 63 | 498 | 1.94e-123 | 374 |
MS.gene071540.t1 | AT1G79270 | 45.588 | 476 | 209 | 11 | 91 | 556 | 63 | 498 | 1.94e-123 | 374 |
MS.gene071540.t1 | AT1G79270 | 45.588 | 476 | 209 | 11 | 91 | 556 | 63 | 498 | 1.94e-123 | 374 |
MS.gene071540.t1 | AT1G79270 | 45.588 | 476 | 209 | 11 | 91 | 556 | 78 | 513 | 1.96e-123 | 374 |
MS.gene071540.t1 | AT1G48110 | 38.966 | 503 | 246 | 12 | 71 | 534 | 13 | 493 | 6.23e-98 | 311 |
MS.gene071540.t1 | AT1G48110 | 38.966 | 503 | 246 | 12 | 71 | 534 | 13 | 493 | 6.23e-98 | 311 |
MS.gene071540.t1 | AT3G13060 | 57.031 | 256 | 88 | 4 | 294 | 533 | 316 | 565 | 1.60e-92 | 297 |
MS.gene071540.t1 | AT3G13060 | 57.031 | 256 | 88 | 4 | 294 | 533 | 306 | 555 | 1.74e-92 | 297 |
MS.gene071540.t1 | AT3G13060 | 54.007 | 287 | 107 | 7 | 294 | 561 | 294 | 574 | 1.77e-92 | 296 |
MS.gene071540.t1 | AT3G13060 | 54.007 | 287 | 107 | 7 | 294 | 561 | 294 | 574 | 1.77e-92 | 296 |
MS.gene071540.t1 | AT3G17330 | 41.686 | 439 | 207 | 13 | 116 | 535 | 35 | 443 | 3.82e-90 | 290 |
MS.gene071540.t1 | AT3G17330 | 41.686 | 439 | 207 | 13 | 116 | 535 | 35 | 443 | 3.82e-90 | 290 |
MS.gene071540.t1 | AT3G17330 | 57.965 | 226 | 92 | 1 | 313 | 535 | 116 | 341 | 8.13e-90 | 286 |
MS.gene071540.t1 | AT3G13460 | 51.203 | 291 | 115 | 6 | 275 | 545 | 335 | 618 | 1.02e-89 | 291 |
MS.gene071540.t1 | AT3G13460 | 51.203 | 291 | 115 | 6 | 275 | 545 | 338 | 621 | 1.03e-89 | 291 |
MS.gene071540.t1 | AT3G13460 | 51.203 | 291 | 115 | 6 | 275 | 545 | 337 | 620 | 1.26e-89 | 290 |
MS.gene071540.t1 | AT1G09810 | 57.391 | 230 | 97 | 1 | 305 | 534 | 175 | 403 | 1.29e-85 | 274 |
MS.gene071540.t1 | AT1G09810 | 51.799 | 278 | 126 | 4 | 261 | 534 | 88 | 361 | 1.55e-85 | 273 |
MS.gene071540.t1 | AT1G09810 | 57.391 | 230 | 97 | 1 | 305 | 534 | 156 | 384 | 1.87e-85 | 273 |
MS.gene071540.t1 | AT1G55500 | 53.307 | 257 | 97 | 4 | 291 | 528 | 324 | 576 | 4.26e-85 | 277 |
MS.gene071540.t1 | AT1G55500 | 53.307 | 257 | 97 | 4 | 291 | 528 | 324 | 576 | 4.40e-85 | 276 |
MS.gene071540.t1 | AT1G55500 | 53.307 | 257 | 97 | 4 | 291 | 528 | 281 | 533 | 5.39e-85 | 275 |
MS.gene071540.t1 | AT1G55500 | 53.307 | 257 | 97 | 4 | 291 | 528 | 268 | 520 | 5.43e-85 | 275 |
MS.gene071540.t1 | AT1G55500 | 53.307 | 257 | 97 | 4 | 291 | 528 | 311 | 563 | 6.69e-85 | 276 |
MS.gene071540.t1 | AT1G55500 | 53.307 | 257 | 97 | 4 | 291 | 528 | 324 | 576 | 8.60e-85 | 276 |
MS.gene071540.t1 | AT5G61020 | 55.274 | 237 | 86 | 4 | 310 | 533 | 197 | 426 | 2.36e-84 | 272 |
MS.gene071540.t1 | AT5G61020 | 55.274 | 237 | 86 | 4 | 310 | 533 | 199 | 428 | 2.63e-84 | 271 |
MS.gene071540.t1 | AT3G03950 | 55.357 | 224 | 96 | 1 | 310 | 533 | 189 | 408 | 2.81e-81 | 261 |
MS.gene071540.t1 | AT3G03950 | 55.357 | 224 | 96 | 1 | 310 | 533 | 190 | 409 | 2.95e-81 | 261 |
MS.gene071540.t1 | AT3G03950 | 55.357 | 224 | 96 | 1 | 310 | 533 | 193 | 412 | 3.02e-81 | 261 |
MS.gene071540.t1 | AT1G27960 | 56.250 | 224 | 83 | 3 | 310 | 533 | 215 | 423 | 4.93e-79 | 257 |
MS.gene071540.t1 | AT1G27960 | 56.250 | 224 | 83 | 3 | 310 | 533 | 289 | 497 | 4.44e-78 | 256 |
MS.gene071540.t1 | AT5G58190 | 38.428 | 458 | 218 | 17 | 113 | 555 | 106 | 514 | 5.00e-77 | 253 |
MS.gene071540.t1 | AT5G58190 | 38.428 | 458 | 218 | 17 | 113 | 555 | 105 | 513 | 5.36e-77 | 253 |
MS.gene071540.t1 | AT3G13060 | 56.075 | 214 | 72 | 4 | 294 | 491 | 316 | 523 | 1.74e-71 | 239 |
MS.gene071540.t1 | AT3G13460 | 45.783 | 166 | 63 | 6 | 275 | 420 | 338 | 496 | 6.00e-29 | 121 |
MS.gene071540.t1 | AT3G13060 | 43.357 | 143 | 59 | 4 | 294 | 420 | 316 | 452 | 4.76e-25 | 108 |
MS.gene071540.t1 | AT1G27960 | 48.214 | 112 | 43 | 3 | 310 | 421 | 289 | 385 | 1.10e-19 | 92.4 |
MS.gene071540.t1 | AT4G11970 | 30.357 | 168 | 82 | 5 | 343 | 491 | 44 | 195 | 1.99e-13 | 72.4 |
MS.gene071540.t1 | AT4G11970 | 30.357 | 168 | 82 | 5 | 343 | 491 | 44 | 195 | 2.20e-13 | 72.4 |
MS.gene071540.t1 | AT4G11970 | 30.357 | 168 | 82 | 5 | 343 | 491 | 44 | 195 | 2.24e-13 | 72.4 |
MS.gene071540.t1 | AT4G11970 | 30.460 | 174 | 84 | 6 | 343 | 497 | 44 | 199 | 4.73e-13 | 72.0 |
MS.gene071540.t1 | AT4G11970 | 30.460 | 174 | 84 | 6 | 343 | 497 | 44 | 199 | 4.73e-13 | 72.0 |
Find 0 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGACTTCTAAATAAATTAT+TGG | - | 14997:10563-10582 | MS.gene071540:intergenic | 15.0% |
!! | ATAGTAGAAAAATAAAGAAT+TGG | - | 14997:10518-10537 | MS.gene071540:intergenic | 15.0% |
!! | ATATAAATGAAAAGTAAAGA+AGG | - | 14997:10620-10639 | MS.gene071540:intergenic | 15.0% |
!! | CATTTATTAAATATTGTGAA+AGG | - | 14997:10376-10395 | MS.gene071540:intergenic | 15.0% |
!! | GAAAATAACATGTTAATAAA+AGG | + | 14997:8174-8193 | MS.gene071540:intron | 15.0% |
!! | TAATTGTAACACAATTAAAA+AGG | - | 14997:10593-10612 | MS.gene071540:intergenic | 15.0% |
!! | TAGTAGAAAAATAAAGAATT+GGG | - | 14997:10517-10536 | MS.gene071540:intergenic | 15.0% |
!! | TATAAATGAAAAGTAAAGAA+GGG | - | 14997:10619-10638 | MS.gene071540:intergenic | 15.0% |
!!! | AATTCTTTATTTTTCTACTA+TGG | + | 14997:10517-10536 | MS.gene071540:intron | 15.0% |
!!! | AATTTTTGTTGGTTTTATTT+AGG | + | 14997:8393-8412 | MS.gene071540:intron | 15.0% |
!!! | ATGTTTTCTTATTGTATTTT+TGG | + | 14997:7268-7287 | MS.gene071540:intron | 15.0% |
!!! | GTAAATATCTAAATTTTTGT+TGG | + | 14997:8382-8401 | MS.gene071540:intron | 15.0% |
!!! | TCTTTGCTTATATATAATTT+TGG | + | 14997:10815-10834 | MS.gene071540:intron | 15.0% |
!!! | TTGAATTCTGAAATAAATTT+GGG | + | 14997:8133-8152 | MS.gene071540:intron | 15.0% |
!!! | TTTCTCTTTCTAAAATTATA+AGG | - | 14997:8962-8981 | MS.gene071540:intergenic | 15.0% |
!!! | TTTGAATTCTGAAATAAATT+TGG | + | 14997:8132-8151 | MS.gene071540:intron | 15.0% |
!! | AAACAATAGTTAAAACAGAA+CGG | - | 14997:8869-8888 | MS.gene071540:intergenic | 20.0% |
!! | AATGTCAAAAAAGAATTCAT+TGG | - | 14997:10294-10313 | MS.gene071540:intergenic | 20.0% |
!! | AGATTATTCTAAATAGTTTG+TGG | + | 14997:9055-9074 | MS.gene071540:intron | 20.0% |
!! | ATGAGTAGATTATGAAAATT+TGG | - | 14997:10650-10669 | MS.gene071540:intergenic | 20.0% |
!! | CAAAAACTAAAGAAATGAAA+GGG | - | 14997:10787-10806 | MS.gene071540:intergenic | 20.0% |
!! | CAAAGTAATTAATAACTCTT+TGG | + | 14997:10459-10478 | MS.gene071540:intron | 20.0% |
!! | TGAGTAGATTATGAAAATTT+GGG | - | 14997:10649-10668 | MS.gene071540:intergenic | 20.0% |
!!! | ATTTGTTGTATGTTATGTTA+AGG | + | 14997:7291-7310 | MS.gene071540:intron | 20.0% |
!!! | ATTTTAGAAAGAGAAATAAG+TGG | + | 14997:8966-8985 | MS.gene071540:intron | 20.0% |
!!! | TCATGATAATTGTGTTATTA+TGG | + | 14997:7855-7874 | MS.gene071540:intron | 20.0% |
!!! | TGTTCTTCTTGTTTATTTTT+TGG | + | 14997:6953-6972 | MS.gene071540:intron | 20.0% |
!!! | TTCTTTTTTGACATTATTGA+TGG | + | 14997:10299-10318 | MS.gene071540:intron | 20.0% |
!!! | TTTATGTTTTTCCTTTCTTA+CGG | + | 14997:7708-7727 | MS.gene071540:intron | 20.0% |
! | AACTATATATTGAACTGTTG+GGG | + | 14997:8989-9008 | MS.gene071540:intron | 25.0% |
! | AACTCCAAATTATTCCAAAA+AGG | - | 14997:10430-10449 | MS.gene071540:intergenic | 25.0% |
! | AAGATACAGAAGAAATAACT+AGG | - | 14997:9994-10013 | MS.gene071540:intergenic | 25.0% |
! | ACTCCAAATTATTCCAAAAA+GGG | - | 14997:10429-10448 | MS.gene071540:intergenic | 25.0% |
! | ATGAGCAAATAAAACACAAA+CGG | - | 14997:9653-9672 | MS.gene071540:intergenic | 25.0% |
! | GAAAATCAAGGATATTATGT+CGG | + | 14997:7771-7790 | MS.gene071540:CDS | 25.0% |
! | GAACTATATATTGAACTGTT+GGG | + | 14997:8988-9007 | MS.gene071540:intron | 25.0% |
! | GCAAAAACTAAAGAAATGAA+AGG | - | 14997:10788-10807 | MS.gene071540:intergenic | 25.0% |
! | GTTGAAGAAACATCTAATAT+TGG | - | 14997:8794-8813 | MS.gene071540:intergenic | 25.0% |
! | TAACATTCAAGGAAAAAATG+TGG | + | 14997:8276-8295 | MS.gene071540:intron | 25.0% |
! | TAAGCATATATCTTCAGAAA+GGG | + | 14997:8058-8077 | MS.gene071540:intron | 25.0% |
! | TATGTTAAGGTTTCTTCAAA+GGG | + | 14997:7304-7323 | MS.gene071540:intron | 25.0% |
! | TATTATGGATATTACTATCC+AGG | + | 14997:7460-7479 | MS.gene071540:CDS | 25.0% |
! | TATTGCATTACACATGAAAA+TGG | + | 14997:8206-8225 | MS.gene071540:intron | 25.0% |
! | TCAGATTCAAGTATTTATAC+AGG | - | 14997:7943-7962 | MS.gene071540:intergenic | 25.0% |
! | TGAACATAATAATTCCAACA+TGG | + | 14997:7118-7137 | MS.gene071540:CDS | 25.0% |
! | TGTAACACAATTAAAAAGGT+GGG | - | 14997:10589-10608 | MS.gene071540:intergenic | 25.0% |
! | TTAAGCATATATCTTCAGAA+AGG | + | 14997:8057-8076 | MS.gene071540:intron | 25.0% |
! | TTAGTAAGAAGTAAGAACTT+TGG | - | 14997:10241-10260 | MS.gene071540:intergenic | 25.0% |
! | TTATGTTAAGGTTTCTTCAA+AGG | + | 14997:7303-7322 | MS.gene071540:intron | 25.0% |
! | TTGTAACACAATTAAAAAGG+TGG | - | 14997:10590-10609 | MS.gene071540:intergenic | 25.0% |
!! | AAGTTTTCTACATACAATCA+AGG | + | 14997:9151-9170 | MS.gene071540:CDS | 25.0% |
!! | TTTAGAATAGTTTGTCAACT+AGG | - | 14997:10399-10418 | MS.gene071540:intergenic | 25.0% |
!!! | AAGAAATGAAAGGGTTTTTT+CGG | - | 14997:10778-10797 | MS.gene071540:intergenic | 25.0% |
!!! | ACTTATTTTTACTCGAAACT+CGG | + | 14997:10705-10724 | MS.gene071540:intron | 25.0% |
!!! | ATACCCTTTTTGGAATAATT+TGG | + | 14997:10423-10442 | MS.gene071540:intron | 25.0% |
!!! | ATTAGGAAAGTTGTTTTGAT+AGG | - | 14997:9191-9210 | MS.gene071540:intergenic | 25.0% |
!!! | ATTTTTTCCTTGAATGTTAC+AGG | - | 14997:8275-8294 | MS.gene071540:intergenic | 25.0% |
!!! | TTAGGAAAGTTGTTTTGATA+GGG | - | 14997:9190-9209 | MS.gene071540:intergenic | 25.0% |
!!! | TTCTGAAATAAATTTGGGAT+TGG | + | 14997:8138-8157 | MS.gene071540:intron | 25.0% |
!!! | TTTTGATAATTGTTGAGTTC+AGG | + | 14997:9708-9727 | MS.gene071540:intron | 25.0% |
!!! | TTTTGGAATAATTTGGAGTT+GGG | + | 14997:10430-10449 | MS.gene071540:intron | 25.0% |
!!! | TTTTTGGAATAATTTGGAGT+TGG | + | 14997:10429-10448 | MS.gene071540:intron | 25.0% |
AGATCATGTGTATCATCAAT+AGG | + | 14997:7352-7371 | MS.gene071540:CDS | 30.0% | |
AGGGAATCGTTATAATGAAT+TGG | + | 14997:8648-8667 | MS.gene071540:CDS | 30.0% | |
CAACCACAATTATGCAAAAA+TGG | - | 14997:10346-10365 | MS.gene071540:intergenic | 30.0% | |
GAAGAAACATCTAATATTGG+TGG | - | 14997:8791-8810 | MS.gene071540:intergenic | 30.0% | |
GGAACTATATATTGAACTGT+TGG | + | 14997:8987-9006 | MS.gene071540:intron | 30.0% | |
GTAAAATCAAACCTGTACAT+TGG | - | 14997:10198-10217 | MS.gene071540:intergenic | 30.0% | |
TAATCATTCTACCGTAAGAA+AGG | - | 14997:7722-7741 | MS.gene071540:intergenic | 30.0% | |
TACCGAAAAGAAAAGGAATA+CGG | - | 14997:9590-9609 | MS.gene071540:intergenic | 30.0% | |
TATTCTGCTGGTAGTTATTA+TGG | + | 14997:7445-7464 | MS.gene071540:CDS | 30.0% | |
TCATATTTGGTTGGAAAATC+AGG | - | 14997:9409-9428 | MS.gene071540:intergenic | 30.0% | |
TGAGCAAATAAAACACAAAC+GGG | - | 14997:9652-9671 | MS.gene071540:intergenic | 30.0% | |
! | AGTGGATTTCAACAAAAGTA+TGG | + | 14997:9777-9796 | MS.gene071540:CDS | 30.0% |
! | ATTGATAACACTGACGAATA+GGG | - | 14997:7506-7525 | MS.gene071540:intergenic | 30.0% |
! | CATTTTTGCATAATTGTGGT+TGG | + | 14997:10344-10363 | MS.gene071540:intron | 30.0% |
! | CTGATAATTTGCATTGCATT+AGG | + | 14997:7959-7978 | MS.gene071540:intron | 30.0% |
! | GAAAAGTGCATGATCATATT+TGG | - | 14997:9422-9441 | MS.gene071540:intergenic | 30.0% |
! | TCAACAAAAGTATGGATTTC+TGG | + | 14997:9785-9804 | MS.gene071540:CDS | 30.0% |
! | TCTAAACTTGATACCCTTTT+TGG | + | 14997:10413-10432 | MS.gene071540:intron | 30.0% |
!! | AATAGTTTGTGGTGTTTTTC+AGG | + | 14997:9066-9085 | MS.gene071540:intron | 30.0% |
!! | AGAACTTTGGAATAAGAACA+AGG | - | 14997:10228-10247 | MS.gene071540:intergenic | 30.0% |
!! | GTACTTGTTGCTTTCATATT+AGG | - | 14997:9208-9227 | MS.gene071540:intergenic | 30.0% |
!! | TTATAATGTGCCATTTGACA+GGG | - | 14997:9837-9856 | MS.gene071540:intergenic | 30.0% |
!! | TTTATAATGTGCCATTTGAC+AGG | - | 14997:9838-9857 | MS.gene071540:intergenic | 30.0% |
!!! | AATTTGGGATTGGCTAATTT+TGG | + | 14997:8148-8167 | MS.gene071540:intron | 30.0% |
!!! | TAGGAAAGTTGTTTTGATAG+GGG | - | 14997:9189-9208 | MS.gene071540:intergenic | 30.0% |
AAATAGTAGAGACACTCAAG+AGG | + | 14997:9921-9940 | MS.gene071540:CDS | 35.0% | |
AATTGACCAGATATGCAACA+AGG | - | 14997:7902-7921 | MS.gene071540:intergenic | 35.0% | |
ACATACAATCAAGGAAAGAG+TGG | + | 14997:9160-9179 | MS.gene071540:CDS | 35.0% | |
ACCGAAAAGAAAAGGAATAC+GGG | - | 14997:9589-9608 | MS.gene071540:intergenic | 35.0% | |
ACTTCCATCAACATACTCAT+GGG | + | 14997:8594-8613 | MS.gene071540:CDS | 35.0% | |
AGAATGATTACAGGTTATGG+TGG | + | 14997:7732-7751 | MS.gene071540:intron | 35.0% | |
AGTGCATGATCATATTTGGT+TGG | - | 14997:9418-9437 | MS.gene071540:intergenic | 35.0% | |
ATAAGCAACATTCTGATCAG+TGG | - | 14997:7428-7447 | MS.gene071540:intergenic | 35.0% | |
ATAAGGTGAAATATAGCCAG+GGG | - | 14997:8566-8585 | MS.gene071540:intergenic | 35.0% | |
ATATTCCAAATCCTCAGCTA+CGG | + | 14997:9860-9879 | MS.gene071540:CDS | 35.0% | |
ATGAAAGCAACAAGTACCAA+GGG | + | 14997:9211-9230 | MS.gene071540:CDS | 35.0% | |
ATGAATAAGAAGAAGCTGCA+TGG | + | 14997:7080-7099 | MS.gene071540:CDS | 35.0% | |
ATGGCTGCTGAATTGAAAAA+AGG | + | 14997:6917-6936 | MS.gene071540:CDS | 35.0% | |
ATTTGGTTGGAAAATCAGGA+AGG | - | 14997:9405-9424 | MS.gene071540:intergenic | 35.0% | |
CAATAGTTAAAACAGAACGG+AGG | - | 14997:8866-8885 | MS.gene071540:intergenic | 35.0% | |
CATAAGGTGAAATATAGCCA+GGG | - | 14997:8567-8586 | MS.gene071540:intergenic | 35.0% | |
CATACAATCAAGGAAAGAGT+GGG | + | 14997:9161-9180 | MS.gene071540:CDS | 35.0% | |
CATATCAGCTGTAAAGAACA+TGG | + | 14997:10882-10901 | MS.gene071540:CDS | 35.0% | |
CCTAGAACAGTTAATGCAAA+AGG | + | 14997:9304-9323 | MS.gene071540:CDS | 35.0% | |
CTCACAACAACATGAAACAA+TGG | - | 14997:8005-8024 | MS.gene071540:intergenic | 35.0% | |
GATAGCATACCGAAAAGAAA+AGG | - | 14997:9597-9616 | MS.gene071540:intergenic | 35.0% | |
GGTAGAATGATTACAGGTTA+TGG | + | 14997:7729-7748 | MS.gene071540:intron | 35.0% | |
GTATGTAGAAAACTTTGCGA+CGG | - | 14997:9146-9165 | MS.gene071540:intergenic | 35.0% | |
TACTTCCATCAACATACTCA+TGG | + | 14997:8593-8612 | MS.gene071540:CDS | 35.0% | |
TATGAAAGCAACAAGTACCA+AGG | + | 14997:9210-9229 | MS.gene071540:CDS | 35.0% | |
TATGGAGAGCAAGAAAATCA+AGG | + | 14997:7759-7778 | MS.gene071540:CDS | 35.0% | |
TATGTAGAAAACTTTGCGAC+GGG | - | 14997:9145-9164 | MS.gene071540:intergenic | 35.0% | |
TCACTTAATGAGCAGAATCA+AGG | + | 14997:9280-9299 | MS.gene071540:CDS | 35.0% | |
TCCAATTGGTTGTTGAAAGA+CGG | - | 14997:8542-8561 | MS.gene071540:intergenic | 35.0% | |
TCTTACGGTAGAATGATTAC+AGG | + | 14997:7723-7742 | MS.gene071540:intron | 35.0% | |
TGTATCGAGAACATCGATAT+TGG | + | 14997:10100-10119 | MS.gene071540:CDS | 35.0% | |
TTAGACAGCGACAAATAAAC+AGG | - | 14997:8897-8916 | MS.gene071540:intergenic | 35.0% | |
TTCACTTTCTCAACCAACTT+AGG | - | 14997:10943-10962 | MS.gene071540:intergenic | 35.0% | |
TTGAGAAAGTGAATGACTGA+TGG | + | 14997:10950-10969 | MS.gene071540:CDS | 35.0% | |
TTGAGCATTTCAATACCTTG+CGG | - | 14997:10065-10084 | MS.gene071540:intergenic | 35.0% | |
! | AAGTTTCTTGAGCTGGTTTA+TGG | + | 14997:7824-7843 | MS.gene071540:intron | 35.0% |
! | AGTTTGCTCACATTAGATGA+GGG | - | 14997:8748-8767 | MS.gene071540:intergenic | 35.0% |
! | ATGTTGATCTGTCCTGATTT+TGG | - | 14997:9380-9399 | MS.gene071540:intergenic | 35.0% |
! | CCTTTTGCATTAACTGTTCT+AGG | - | 14997:9307-9326 | MS.gene071540:intergenic | 35.0% |
! | GATTGATAACACTGACGAAT+AGG | - | 14997:7507-7526 | MS.gene071540:intergenic | 35.0% |
! | GTGTCTCTACTATTTGTTAC+AGG | - | 14997:9916-9935 | MS.gene071540:intergenic | 35.0% |
! | TCCCGTATTCCTTTTCTTTT+CGG | + | 14997:9585-9604 | MS.gene071540:CDS | 35.0% |
! | TTAAACTCTGGAGGTAATTC+TGG | + | 14997:9331-9350 | MS.gene071540:CDS | 35.0% |
! | TTTTGCATAATTGTGGTTGG+AGG | + | 14997:10347-10366 | MS.gene071540:intron | 35.0% |
!! | AAAGGTACTTTAAACTCTGG+AGG | + | 14997:9322-9341 | MS.gene071540:CDS | 35.0% |
!! | ATTTCTGGCAGCAAGATAAA+TGG | + | 14997:9800-9819 | MS.gene071540:CDS | 35.0% |
!! | CTATGGTTGATGTGTTCTTT+TGG | + | 14997:10534-10553 | MS.gene071540:intron | 35.0% |
!! | GCAAAAGGTACTTTAAACTC+TGG | + | 14997:9319-9338 | MS.gene071540:CDS | 35.0% |
!! | GGACCATTTTTGCATAATTG+TGG | + | 14997:10340-10359 | MS.gene071540:intron | 35.0% |
!! | GTTACCTTGTTTGCTTGTTT+TGG | - | 14997:8836-8855 | MS.gene071540:intergenic | 35.0% |
!!! | AATGAAAGGGTTTTTTCGGT+TGG | - | 14997:10774-10793 | MS.gene071540:intergenic | 35.0% |
!!! | ACAGGTTATGGTGGATTTTA+TGG | + | 14997:7741-7760 | MS.gene071540:intron | 35.0% |
!!! | GCTTCTGGTAGTTTTAAAGA+AGG | + | 14997:7379-7398 | MS.gene071540:CDS | 35.0% |
!!! | TTTTTTCGGTTGGACTAGTT+TGG | - | 14997:10764-10783 | MS.gene071540:intergenic | 35.0% |
AAAACAGAACGGAGGAAGTA+AGG | - | 14997:8858-8877 | MS.gene07154:intergenic | 40.0% | |
AACCAGCTCAAGAAACTTAC+AGG | - | 14997:7822-7841 | MS.gene071540:intergenic | 40.0% | |
ACACATGATCTTGCATCAGA+TGG | - | 14997:7343-7362 | MS.gene071540:intergenic | 40.0% | |
ACGGATATTTCCCTGTCAAA+TGG | + | 14997:9824-9843 | MS.gene071540:CDS | 40.0% | |
AGCAAACTCATCAGAAGTGA+AGG | + | 14997:8760-8779 | MS.gene071540:intron | 40.0% | |
ATCAGCTGTAAAGAACATGG+AGG | + | 14997:10885-10904 | MS.gene071540:CDS | 40.0% | |
ATCCTGTAAGTTTCTTGAGC+TGG | + | 14997:7817-7836 | MS.gene071540:intron | 40.0% | |
ATTGCATCTGAATGGAGAAC+AGG | - | 14997:9106-9125 | MS.gene071540:intergenic | 40.0% | |
CAAACCTGTACATTGGTATG+TGG | - | 14997:10191-10210 | MS.gene071540:intergenic | 40.0% | |
CAACATTCTGATCAGTGGAT+TGG | - | 14997:7423-7442 | MS.gene071540:intergenic | 40.0% | |
CAGAATCGAATGGAAGAGAA+AGG | + | 14997:9553-9572 | MS.gene071540:CDS | 40.0% | |
CATTCAGATGCAATGCCAAA+GGG | + | 14997:9112-9131 | MS.gene071540:CDS | 40.0% | |
CCATAAGGTGAAATATAGCC+AGG | - | 14997:8568-8587 | MS.gene071540:intergenic | 40.0% | |
CCTGGCTATATTTCACCTTA+TGG | + | 14997:8565-8584 | MS.gene071540:CDS | 40.0% | |
CTCTGTTCTGTTAAGACCTA+CGG | + | 14997:9626-9645 | MS.gene071540:intron | 40.0% | |
CTGATGTCCTGTAACATTCA+AGG | + | 14997:8265-8284 | MS.gene071540:intron | 40.0% | |
GAAAAGATCGATCTACCACT+CGG | - | 14997:8682-8701 | MS.gene071540:intergenic | 40.0% | |
GAAGACTTAACAAGTGCACT+TGG | + | 14997:10850-10869 | MS.gene071540:CDS | 40.0% | |
GAAGCTGAAACTCAGAAACA+AGG | + | 14997:9249-9268 | MS.gene071540:CDS | 40.0% | |
GAATCCCATGAGTATGTTGA+TGG | - | 14997:8601-8620 | MS.gene071540:intergenic | 40.0% | |
GAGCATCAAGTACGATGTAT+GGG | + | 14997:9480-9499 | MS.gene071540:CDS | 40.0% | |
GATGGAAGTAACTCACCATA+AGG | - | 14997:8583-8602 | MS.gene071540:intergenic | 40.0% | |
GCAAACTCATCAGAAGTGAA+GGG | + | 14997:8761-8780 | MS.gene071540:intron | 40.0% | |
GCTTGTGATCATTATTCTCG+AGG | - | 14997:9894-9913 | MS.gene071540:intergenic | 40.0% | |
GTACACCTAATGGCAATAAG+AGG | + | 14997:9506-9525 | MS.gene071540:CDS | 40.0% | |
GTTAAGGTTTCTTCAAAGGG+TGG | + | 14997:7307-7326 | MS.gene071540:intron | 40.0% | |
TACCTTGCGGAAAATGAATC+TGG | - | 14997:10052-10071 | MS.gene071540:intergenic | 40.0% | |
TAGGTCATGCAAGCAGATAA+TGG | + | 14997:8412-8431 | MS.gene071540:intron | 40.0% | |
TATGCCACATACCAATGTAC+AGG | + | 14997:10184-10203 | MS.gene071540:CDS | 40.0% | |
TCAATGGTGACACCAAAATC+AGG | + | 14997:9365-9384 | MS.gene071540:CDS | 40.0% | |
TCATCAATAGGAGATGCTTC+TGG | + | 14997:7364-7383 | MS.gene071540:CDS | 40.0% | |
TCCGTCTTTCAACAACCAAT+TGG | + | 14997:8538-8557 | MS.gene071540:CDS | 40.0% | |
TCTTATGTCTATCTCATGCC+AGG | + | 14997:8436-8455 | MS.gene071540:CDS | 40.0% | |
TGGCAGCAAGATAAATGGAA+CGG | + | 14997:9805-9824 | MS.gene071540:CDS | 40.0% | |
TGTACATTGGTATGTGGCAT+AGG | - | 14997:10185-10204 | MS.gene071540:intergenic | 40.0% | |
TTTGTTCAGATTCCGCTATG+CGG | + | 14997:7629-7648 | MS.gene071540:intron | 40.0% | |
! | AACGCTAGTGGTCAATTTTG+TGG | + | 14997:9733-9752 | MS.gene071540:CDS | 40.0% |
! | AGAGCATCAAGTACGATGTA+TGG | + | 14997:9479-9498 | MS.gene071540:CDS | 40.0% |
! | CAGAATGTTGCTTATTCTGC+TGG | + | 14997:7433-7452 | MS.gene071540:CDS | 40.0% |
! | GAGTTTGCTCACATTAGATG+AGG | - | 14997:8749-8768 | MS.gene071540:intergenic | 40.0% |
! | TAGTTGCCTTGTTGCATATC+TGG | + | 14997:7893-7912 | MS.gene071540:intron | 40.0% |
! | TTCCAGATTCATTTTCCGCA+AGG | + | 14997:10047-10066 | MS.gene071540:intron | 40.0% |
! | TTTTTACGAAACCCGTCAGA+AGG | + | 14997:10133-10152 | MS.gene071540:CDS | 40.0% |
!! | TCTGGAGATAAGAGTGTCAA+TGG | + | 14997:9349-9368 | MS.gene071540:CDS | 40.0% |
!!! | GTTTTTCAGGCATCCATTTC+TGG | + | 14997:9079-9098 | MS.gene071540:intron | 40.0% |
AAGCAACAAGTACCAAGGGA+TGG | + | 14997:9215-9234 | MS.gene071540:CDS | 45.0% | |
AAGGTTTCTTCAAAGGGTGG+TGG | + | 14997:7310-7329 | MS.gene071540:intron | 45.0% | |
ACATTAACGCTACCGCATAG+CGG | - | 14997:7644-7663 | MS.gene071540:intergenic | 45.0% | |
ACCACACAAGATGTAGCACA+AGG | + | 14997:8628-8647 | MS.gene071540:CDS | 45.0% | |
ACTGACGAATAGGGAACCAT+GGG | - | 14997:7497-7516 | MS.gene071540:intergenic | 45.0% | |
AGCAACAAGTACCAAGGGAT+GGG | + | 14997:9216-9235 | MS.gene071540:CDS | 45.0% | |
AGGACATCAGAGATGATGTC+GGG | - | 14997:8255-8274 | MS.gene071540:intergenic | 45.0% | |
AGGATAATATGCCGTAGCTG+AGG | - | 14997:9874-9893 | MS.gene071540:intergenic | 45.0% | |
ATAAAACACAAACGGGCCGT+AGG | - | 14997:9645-9664 | MS.gene071540:intergenic | 45.0% | |
ATATAGCCAGGGGATCCAAT+TGG | - | 14997:8556-8575 | MS.gene071540:intergenic | 45.0% | |
ATATGCCGTAGCTGAGGATT+TGG | - | 14997:9868-9887 | MS.gene071540:intergenic | 45.0% | |
ATCCACTCGTCCAATCATCT+CGG | - | 14997:9764-9783 | MS.gene071540:intergenic | 45.0% | |
ATGGAGAACAGGACCAGAAA+TGG | - | 14997:9095-9114 | MS.gene071540:intergenic | 45.0% | |
CACATGCAAGCTTACCATGT+TGG | - | 14997:7135-7154 | MS.gene071540:intergenic | 45.0% | |
CAGGACATCAGAGATGATGT+CGG | - | 14997:8256-8275 | MS.gene071540:intergenic | 45.0% | |
CCACACAAGATGTAGCACAA+GGG | + | 14997:8629-8648 | MS.gene071540:CDS | 45.0% | |
CCAGCCAAAACAAGCAAACA+AGG | + | 14997:8829-8848 | MS.gene071540:CDS | 45.0% | |
CCATTCAGATGCAATGCCAA+AGG | + | 14997:9111-9130 | MS.gene071540:CDS | 45.0% | |
CCTTTGGCATTGCATCTGAA+TGG | - | 14997:9114-9133 | MS.gene071540:intergenic | 45.0% | |
GAACATGGAGGATCCTAAGT+TGG | + | 14997:10897-10916 | MS.gene071540:CDS | 45.0% | |
TACTTTCCTGTGAACACACC+TGG | + | 14997:8481-8500 | MS.gene071540:CDS | 45.0% | |
TCAGGATGCACAGAATCGAA+TGG | + | 14997:9543-9562 | MS.gene071540:CDS | 45.0% | |
TCGAGCCTCTTATTGCCATT+AGG | - | 14997:9514-9533 | MS.gene071540:intergenic | 45.0% | |
TCTCTTGCATGACCTTCTGA+CGG | - | 14997:10148-10167 | MS.gene071540:intergenic | 45.0% | |
TGAACTGTTGGGGATTTCGT+AGG | + | 14997:8999-9018 | MS.gene071540:intron | 45.0% | |
TGGATGAGTGCATGTGATTG+TGG | + | 14997:10319-10338 | MS.gene071540:intron | 45.0% | |
! | TTTTCTTCGCAGAGTCGTAC+TGG | + | 14997:8697-8716 | MS.gene071540:CDS | 45.0% |
!!! | CCTTGTTTGCTTGTTTTGGC+TGG | - | 14997:8832-8851 | MS.gene071540:intergenic | 45.0% |
!!! | TTTATTTTTTTTATATTTTG+CGG | + | 14997:7182-7201 | MS.gene071540:intron | 5.0% |
ACGAATAGGGAACCATGGGA+GGG | - | 14997:7493-7512 | MS.gene071540:intergenic | 50.0% | |
CAACAACCAATTGGATCCCC+TGG | + | 14997:8547-8566 | MS.gene071540:CDS | 50.0% | |
CACTGACGAATAGGGAACCA+TGG | - | 14997:7498-7517 | MS.gene071540:intergenic | 50.0% | |
CAGGAGGGTAAACCTGATAC+TGG | - | 14997:8516-8535 | MS.gene071540:intergenic | 50.0% | |
CAGTATCAGGTTTACCCTCC+TGG | + | 14997:8514-8533 | MS.gene071540:CDS | 50.0% | |
CCCTTGTGCTACATCTTGTG+TGG | - | 14997:8632-8651 | MS.gene071540:intergenic | 50.0% | |
CGATCTACCACTCGGTTTAC+TGG | - | 14997:8674-8693 | MS.gene071540:intergenic | 50.0% | |
CTCAGTACTAACCCATCCCT+TGG | - | 14997:9230-9249 | MS.gene071540:intergenic | 50.0% | |
CTCATGCCAGGATATCAGAC+TGG | + | 14997:8448-8467 | MS.gene071540:CDS | 50.0% | |
CTCTTGCATGACCTTCTGAC+GGG | - | 14997:10147-10166 | MS.gene071540:intergenic | 50.0% | |
GAATTGGCCAGTAAACCGAG+TGG | + | 14997:8664-8683 | MS.gene071540:CDS | 50.0% | |
GAGGCTCGACAATGCATTTC+AGG | + | 14997:9525-9544 | MS.gene071540:CDS | 50.0% | |
GAGTAGCCAGTCTGATATCC+TGG | - | 14997:8457-8476 | MS.gene071540:intergenic | 50.0% | |
GCTATGCGGTAGCGTTAATG+TGG | + | 14997:7643-7662 | MS.gene071540:intron | 50.0% | |
GGTTGTTGAAAGACGGAACC+AGG | - | 14997:8535-8554 | MS.gene071540:intergenic | 50.0% | |
GTATGGGCGAGTACACCTAA+TGG | + | 14997:9496-9515 | MS.gene071540:CDS | 50.0% | |
GTTGAAAGACGGAACCAGGA+GGG | - | 14997:8531-8550 | MS.gene071540:intergenic | 50.0% | |
TGAGTTCAGGTCAACGCTAG+TGG | + | 14997:9721-9740 | MS.gene071540:intron | 50.0% | |
TGATACTGGACATCGACACC+AGG | - | 14997:8502-8521 | MS.gene071540:intergenic | 50.0% | |
TGTGGAGTAGCCGAGATGAT+TGG | + | 14997:9751-9770 | MS.gene071540:CDS | 50.0% | |
TGTTGAAAGACGGAACCAGG+AGG | - | 14997:8532-8551 | MS.gene071540:intergenic | 50.0% | |
!! | TGGTGTCGATGTCCAGTATC+AGG | + | 14997:8501-8520 | MS.gene071540:CDS | 50.0% |
!! | TTATGTCGGCGCTGATGCTA+TGG | + | 14997:7785-7804 | MS.gene071540:CDS | 50.0% |
AGCCGAGATGATTGGACGAG+TGG | + | 14997:9759-9778 | MS.gene071540:CDS | 55.0% | |
GACGAATAGGGAACCATGGG+AGG | - | 14997:7494-7513 | MS.gene071540:intergenic | 55.0% | |
GCGACGGGAAAAGAACCCTT+TGG | - | 14997:9130-9149 | MS.gene071540:intergenic | 55.0% | |
TCGACACCAGGTGTGTTCAC+AGG | - | 14997:8490-8509 | MS.gene071540:intergenic | 55.0% | |
CCATGGGAGGGAAGCTAACC+TGG | - | 14997:7481-7500 | MS.gene071540:intergenic | 60.0% | |
! | TCGCAGAGTCGTACTGGCAG+TGG | + | 14997:8703-8722 | MS.gene071540:CDS | 60.0% |
!! | CCAGGTTAGCTTCCCTCCCA+TGG | + | 14997:7478-7497 | MS.gene071540:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
14997 | gene | 6917 | 10969 | 6917 | ID=MS.gene071540 |
14997 | mRNA | 6917 | 10969 | 6917 | ID=MS.gene071540.t1;Parent=MS.gene071540 |
14997 | exon | 6917 | 6938 | 6917 | ID=MS.gene071540.t1.exon1;Parent=MS.gene071540.t1 |
14997 | CDS | 6917 | 6938 | 6917 | ID=cds.MS.gene071540.t1;Parent=MS.gene071540.t1 |
14997 | exon | 7069 | 7139 | 7069 | ID=MS.gene071540.t1.exon2;Parent=MS.gene071540.t1 |
14997 | CDS | 7069 | 7139 | 7069 | ID=cds.MS.gene071540.t1;Parent=MS.gene071540.t1 |
14997 | exon | 7313 | 7481 | 7313 | ID=MS.gene071540.t1.exon3;Parent=MS.gene071540.t1 |
14997 | CDS | 7313 | 7481 | 7313 | ID=cds.MS.gene071540.t1;Parent=MS.gene071540.t1 |
14997 | exon | 7745 | 7821 | 7745 | ID=MS.gene071540.t1.exon4;Parent=MS.gene071540.t1 |
14997 | CDS | 7745 | 7821 | 7745 | ID=cds.MS.gene071540.t1;Parent=MS.gene071540.t1 |
14997 | exon | 8415 | 8724 | 8415 | ID=MS.gene071540.t1.exon5;Parent=MS.gene071540.t1 |
14997 | CDS | 8415 | 8724 | 8415 | ID=cds.MS.gene071540.t1;Parent=MS.gene071540.t1 |
14997 | exon | 8762 | 8850 | 8762 | ID=MS.gene071540.t1.exon6;Parent=MS.gene071540.t1 |
14997 | CDS | 8762 | 8850 | 8762 | ID=cds.MS.gene071540.t1;Parent=MS.gene071540.t1 |
14997 | exon | 9088 | 9606 | 9088 | ID=MS.gene071540.t1.exon7;Parent=MS.gene071540.t1 |
14997 | CDS | 9088 | 9606 | 9088 | ID=cds.MS.gene071540.t1;Parent=MS.gene071540.t1 |
14997 | exon | 9730 | 9942 | 9730 | ID=MS.gene071540.t1.exon8;Parent=MS.gene071540.t1 |
14997 | CDS | 9730 | 9942 | 9730 | ID=cds.MS.gene071540.t1;Parent=MS.gene071540.t1 |
14997 | exon | 10053 | 10205 | 10053 | ID=MS.gene071540.t1.exon9;Parent=MS.gene071540.t1 |
14997 | CDS | 10053 | 10205 | 10053 | ID=cds.MS.gene071540.t1;Parent=MS.gene071540.t1 |
14997 | exon | 10844 | 10969 | 10844 | ID=MS.gene071540.t1.exon10;Parent=MS.gene071540.t1 |
14997 | CDS | 10844 | 10969 | 10844 | ID=cds.MS.gene071540.t1;Parent=MS.gene071540.t1 |
Gene Sequence |
Protein sequence |