AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071541

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071541.t1 MTR_2g063460 96.633 594 10 1 1 594 1 584 0.0 1182
MS.gene071541.t1 MTR_2g063460 96.296 594 10 2 1 594 1 582 0.0 1173
MS.gene071541.t1 MTR_2g032660 42.115 520 227 18 70 544 46 536 5.23e-104 329
MS.gene071541.t1 MTR_4g123630 42.664 518 234 13 70 547 11 505 2.48e-103 326
MS.gene071541.t1 MTR_4g005110 64.783 230 75 2 318 545 337 562 1.04e-95 306
MS.gene071541.t1 MTR_8g088390 50.502 299 116 8 276 548 234 526 4.95e-85 277
MS.gene071541.t1 MTR_8g088390 50.502 299 116 8 276 548 299 591 1.05e-84 278
MS.gene071541.t1 MTR_2g005840 62.842 183 68 0 360 542 237 419 7.32e-83 268
MS.gene071541.t1 MTR_2g005840 62.842 183 68 0 360 542 268 450 2.61e-82 267
MS.gene071541.t1 MTR_7g085500 57.820 211 79 2 357 567 415 615 8.90e-80 265
MS.gene071541.t1 MTR_6g032970 52.033 246 88 5 322 547 336 571 3.32e-77 257
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071541.t1 AT1G79270 44.877 488 207 11 91 568 63 498 6.80e-123 372
MS.gene071541.t1 AT1G79270 44.877 488 207 11 91 568 63 498 6.80e-123 372
MS.gene071541.t1 AT1G79270 44.877 488 207 11 91 568 63 498 6.80e-123 372
MS.gene071541.t1 AT1G79270 44.877 488 207 11 91 568 78 513 7.89e-123 373
MS.gene071541.t1 AT1G48110 39.412 510 246 13 71 546 13 493 1.46e-98 313
MS.gene071541.t1 AT1G48110 39.412 510 246 13 71 546 13 493 1.46e-98 313
MS.gene071541.t1 AT3G13060 54.007 287 107 7 306 573 294 574 1.55e-92 297
MS.gene071541.t1 AT3G13060 54.007 287 107 7 306 573 294 574 1.55e-92 297
MS.gene071541.t1 AT3G13060 57.031 256 88 4 306 545 316 565 2.03e-92 297
MS.gene071541.t1 AT3G13060 57.031 256 88 4 306 545 306 555 2.50e-92 297
MS.gene071541.t1 AT3G17330 40.807 446 213 13 116 547 35 443 7.18e-90 290
MS.gene071541.t1 AT3G17330 40.807 446 213 13 116 547 35 443 7.18e-90 290
MS.gene071541.t1 AT3G17330 57.965 226 92 1 325 547 116 341 8.88e-90 286
MS.gene071541.t1 AT3G13460 51.203 291 115 6 287 557 338 621 1.21e-89 291
MS.gene071541.t1 AT3G13460 51.203 291 115 6 287 557 337 620 1.27e-89 291
MS.gene071541.t1 AT3G13460 51.203 291 115 6 287 557 335 618 1.28e-89 291
MS.gene071541.t1 AT1G09810 57.391 230 97 1 317 546 175 403 1.70e-85 274
MS.gene071541.t1 AT1G09810 51.799 278 126 4 273 546 111 384 1.71e-85 274
MS.gene071541.t1 AT1G09810 51.799 278 126 4 273 546 88 361 2.20e-85 273
MS.gene071541.t1 AT1G55500 53.307 257 97 4 303 540 268 520 6.08e-85 275
MS.gene071541.t1 AT1G55500 53.307 257 97 4 303 540 311 563 7.66e-85 276
MS.gene071541.t1 AT5G61020 55.274 237 86 4 322 545 197 426 3.02e-84 272
MS.gene071541.t1 AT5G61020 55.274 237 86 4 322 545 199 428 3.36e-84 272
MS.gene071541.t1 AT3G03950 55.357 224 96 1 322 545 190 409 3.26e-81 262
MS.gene071541.t1 AT3G03950 55.357 224 96 1 322 545 189 408 3.45e-81 261
MS.gene071541.t1 AT3G03950 55.357 224 96 1 322 545 193 412 3.48e-81 262
MS.gene071541.t1 AT1G27960 56.250 224 83 3 322 545 215 423 7.30e-79 257
MS.gene071541.t1 AT1G27960 56.250 224 83 3 322 545 289 497 6.44e-78 256
MS.gene071541.t1 AT5G58190 51.429 245 109 5 328 567 275 514 1.34e-76 253
MS.gene071541.t1 AT5G58190 51.429 245 109 5 328 567 274 513 1.38e-76 253
MS.gene071541.t1 AT1G55500 36.542 509 253 15 87 540 40 533 1.35e-75 251
MS.gene071541.t1 AT1G55500 36.542 509 253 15 87 540 83 576 1.48e-75 252
MS.gene071541.t1 AT1G55500 36.542 509 253 15 87 540 83 576 2.43e-75 251
MS.gene071541.t1 AT3G13060 56.075 214 72 4 306 503 316 523 2.28e-71 239
MS.gene071541.t1 AT3G13460 45.783 166 63 6 287 432 338 496 5.62e-29 121
MS.gene071541.t1 AT3G13060 43.357 143 59 4 306 432 316 452 4.29e-25 108
MS.gene071541.t1 AT1G27960 48.214 112 43 3 322 433 289 385 9.30e-20 92.8
MS.gene071541.t1 AT4G11970 30.357 168 82 5 355 503 44 195 2.19e-13 72.4
MS.gene071541.t1 AT4G11970 30.357 168 82 5 355 503 44 195 2.25e-13 72.4
MS.gene071541.t1 AT4G11970 30.357 168 82 5 355 503 44 195 2.28e-13 72.4
MS.gene071541.t1 AT4G11970 30.357 168 82 5 355 503 44 195 4.95e-13 72.0
MS.gene071541.t1 AT4G11970 30.357 168 82 5 355 503 44 195 4.95e-13 72.0

Find 135 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACTTGTTGCTTTCATATT+AGG 0.139929 2.1:-32979095 None:intergenic
TATTCTGCTGGTAGTTATTA+TGG 0.145347 2.1:+32977334 MS.gene071541:CDS
TCAACAAAAGTATGGATTTC+TGG 0.157531 2.1:+32979675 MS.gene071541:CDS
GAAAAGTGCATGATCATATT+TGG 0.231336 2.1:-32979309 None:intergenic
TTAAACTCTGGAGGTAATTC+TGG 0.231621 2.1:+32979221 MS.gene071541:CDS
GTTACCTTGTTTGCTTGTTT+TGG 0.232110 2.1:-32978723 None:intergenic
GAGGCTCGACAATGCATTTC+AGG 0.241866 2.1:+32979415 MS.gene071541:CDS
CCTGGCTATATTTCACCTTA+TGG 0.275162 2.1:+32978456 MS.gene071541:CDS
GTGTCTCTACTATTTGTTAC+AGG 0.280235 2.1:-32979803 None:intergenic
ATGTTGATCTGTCCTGATTT+TGG 0.281400 2.1:-32979267 None:intergenic
AGTGGATTTCAACAAAAGTA+TGG 0.322061 2.1:+32979667 MS.gene071541:CDS
TCATATTTGGTTGGAAAATC+AGG 0.322709 2.1:-32979296 None:intergenic
CGATCTACCACTCGGTTTAC+TGG 0.323936 2.1:-32978562 None:intergenic
TGTATCGAGAACATCGATAT+TGG 0.347303 2.1:+32979990 MS.gene071541:CDS
ATTTCTGGCAGCAAGATAAA+TGG 0.351407 2.1:+32979690 MS.gene071541:CDS
ATATGCCGTAGCTGAGGATT+TGG 0.367053 2.1:-32979755 None:intergenic
AGGGAATCGTTATAATGAAT+TGG 0.374688 2.1:+32978539 MS.gene071541:CDS
CAGTATCAGGTTTACCCTCC+TGG 0.392158 2.1:+32978405 MS.gene071541:CDS
TTTATAATGTGCCATTTGAC+AGG 0.415396 2.1:-32979725 None:intergenic
TCCGTCTTTCAACAACCAAT+TGG 0.421822 2.1:+32978429 MS.gene071541:CDS
CTCTTGCATGACCTTCTGAC+GGG 0.425352 2.1:-32980034 None:intergenic
ATGTTCTTTACAACCAACTT+AGG 0.426914 2.1:-32980801 None:intergenic
TGGTGTCGATGTCCAGTATC+AGG 0.429764 2.1:+32978392 MS.gene071541:CDS
TAGGTCATGCAAGCAGATAA+TGG 0.430474 2.1:+32978303 MS.gene071541:intron
TCGAGCCTCTTATTGCCATT+AGG 0.430781 2.1:-32979401 None:intergenic
GCGACGGGAAAAGAACCCTT+TGG 0.439928 2.1:-32979017 None:intergenic
AGATCATGTGTATCATCAAT+AGG 0.445206 2.1:+32977241 MS.gene071541:CDS
TTCACTTTCTCAACCAACTT+AGG 0.446586 2.1:-32980831 None:intergenic
ATGGAGAACAGGACCAGAAA+TGG 0.448479 2.1:-32978982 None:intergenic
AGAGCATCAAGTACGATGTA+TGG 0.449332 2.1:+32979369 MS.gene071541:CDS
CAGGAGGGTAAACCTGATAC+TGG 0.449509 2.1:-32978404 None:intergenic
TGTGGAGTAGCCGAGATGAT+TGG 0.450864 2.1:+32979641 MS.gene071541:CDS
TATTATGGATATTACTATCC+AGG 0.456293 2.1:+32977349 MS.gene071541:CDS
GTTGAAGAAACATCTAATAT+TGG 0.457075 2.1:-32978681 None:intergenic
TCATCAATAGGAGATGCTTC+TGG 0.457910 2.1:+32977253 MS.gene071541:CDS
CAGAATGTTGCTTATTCTGC+TGG 0.462148 2.1:+32977322 MS.gene071541:CDS
TATGTTAAGGTTTCTTCAAA+GGG 0.467717 2.1:+32977193 MS.gene071541:intron
TCAATGGTGACACCAAAATC+AGG 0.467791 2.1:+32979255 MS.gene071541:CDS
TTATGTCGGCGCTGATGCTA+TGG 0.468389 2.1:+32977675 MS.gene071541:CDS
TCTCTTGCATGACCTTCTGA+CGG 0.475313 2.1:-32980035 None:intergenic
CAACAACCAATTGGATCCCC+TGG 0.475726 2.1:+32978438 MS.gene071541:CDS
ATTGCATCTGAATGGAGAAC+AGG 0.476903 2.1:-32978993 None:intergenic
CAACATTCTGATCAGTGGAT+TGG 0.479321 2.1:-32977309 None:intergenic
TACCGAAAAGAAAAGGAATA+CGG 0.480275 2.1:-32979477 None:intergenic
CCATAAGGTGAAATATAGCC+AGG 0.480961 2.1:-32978456 None:intergenic
GAGTAGCCAGTCTGATATCC+TGG 0.482425 2.1:-32978345 None:intergenic
CCTAGAACAGTTAATGCAAA+AGG 0.482609 2.1:+32979194 MS.gene071541:CDS
GAATCCCATGAGTATGTTGA+TGG 0.482741 2.1:-32978489 None:intergenic
GGTTGTTGAAAGACGGAACC+AGG 0.487017 2.1:-32978423 None:intergenic
CCTTTGGCATTGCATCTGAA+TGG 0.488787 2.1:-32979001 None:intergenic
TTATGTTAAGGTTTCTTCAA+AGG 0.495686 2.1:+32977192 MS.gene071541:intron
TATGGAGAGCAAGAAAATCA+AGG 0.500681 2.1:+32977649 MS.gene071541:CDS
ACGGATATTTCCCTGTCAAA+TGG 0.501338 2.1:+32979714 MS.gene071541:CDS
TACTTTCCTGTGAACACACC+TGG 0.502118 2.1:+32978372 MS.gene071541:CDS
GATAGCATACCGAAAAGAAA+AGG 0.504322 2.1:-32979484 None:intergenic
TATGTAGAAAACTTTGCGAC+GGG 0.505982 2.1:-32979032 None:intergenic
GCAAAAGGTACTTTAAACTC+TGG 0.507406 2.1:+32979209 MS.gene071541:CDS
TCTGGAGATAAGAGTGTCAA+TGG 0.513122 2.1:+32979239 MS.gene071541:CDS
TACTTCCATCAACATACTCA+TGG 0.517546 2.1:+32978484 MS.gene071541:CDS
CACATGCAAGCTTACCATGT+TGG 0.518787 2.1:-32977021 None:intergenic
TCGCAGAGTCGTACTGGCAG+TGG 0.526655 2.1:+32978594 MS.gene071541:CDS
AGTGCATGATCATATTTGGT+TGG 0.527014 2.1:-32979305 None:intergenic
ATATAGCCAGGGGATCCAAT+TGG 0.527493 2.1:-32978444 None:intergenic
CCCTTGTGCTACATCTTGTG+TGG 0.528879 2.1:-32978520 None:intergenic
GTACACCTAATGGCAATAAG+AGG 0.531549 2.1:+32979396 MS.gene071541:CDS
TCTTATGTCTATCTCATGCC+AGG 0.534138 2.1:+32978327 MS.gene071541:CDS
GATGGAAGTAACTCACCATA+AGG 0.536031 2.1:-32978471 None:intergenic
TCCAATTGGTTGTTGAAAGA+CGG 0.536670 2.1:-32978430 None:intergenic
GTATGGGCGAGTACACCTAA+TGG 0.536841 2.1:+32979386 MS.gene071541:CDS
TCACTTAATGAGCAGAATCA+AGG 0.540048 2.1:+32979170 MS.gene071541:CDS
GAACATGGAGGATCCTAAGT+TGG 0.540134 2.1:+32980788 MS.gene071541:CDS
GAACATGGAGGATCCTAAGT+TGG 0.540134 2.1:+32980818 MS.gene071541:CDS
TCGACACCAGGTGTGTTCAC+AGG 0.547002 2.1:-32978378 None:intergenic
CCAGCCAAAACAAGCAAACA+AGG 0.547719 2.1:+32978719 MS.gene071541:CDS
CCATTCAGATGCAATGCCAA+AGG 0.548568 2.1:+32979001 MS.gene071541:CDS
CATTCAGATGCAATGCCAAA+GGG 0.552432 2.1:+32979002 MS.gene071541:CDS
CAGAATCGAATGGAAGAGAA+AGG 0.555397 2.1:+32979443 MS.gene071541:CDS
CAAACCTGTACATTGGTATG+TGG 0.555627 2.1:-32980078 None:intergenic
AAGGTTTCTTCAAAGGGTGG+TGG 0.558132 2.1:+32977199 MS.gene071541:intron
GAGCATCAAGTACGATGTAT+GGG 0.559060 2.1:+32979370 MS.gene071541:CDS
TATGCCACATACCAATGTAC+AGG 0.568570 2.1:+32980074 MS.gene071541:CDS
GAGCAACTCATCAGAAGTGA+AGG 0.569571 2.1:+32978650 MS.gene071541:CDS
CATATCAGCTGTAAAGAACA+TGG 0.571245 2.1:+32980773 MS.gene071541:CDS
CTCAGTACTAACCCATCCCT+TGG 0.572036 2.1:-32979117 None:intergenic
TTATAATGTGCCATTTGACA+GGG 0.573430 2.1:-32979724 None:intergenic
GAAGACTTAACAAGTGCACT+TGG 0.574492 2.1:+32980741 MS.gene071541:CDS
AGCAACAAGTACCAAGGGAT+GGG 0.576647 2.1:+32979106 MS.gene071541:CDS
CTCATGCCAGGATATCAGAC+TGG 0.577228 2.1:+32978339 MS.gene071541:CDS
GAAGAAACATCTAATATTGG+TGG 0.577898 2.1:-32978678 None:intergenic
ACCGAAAAGAAAAGGAATAC+GGG 0.578211 2.1:-32979476 None:intergenic
GTTAAGGTTTCTTCAAAGGG+TGG 0.579681 2.1:+32977196 MS.gene071541:intron
GTATGTAGAAAACTTTGCGA+CGG 0.581650 2.1:-32979033 None:intergenic
ACATACAATCAAGGAAAGAG+TGG 0.582689 2.1:+32979050 MS.gene071541:CDS
GCTTGTGATCATTATTCTCG+AGG 0.582868 2.1:-32979781 None:intergenic
ATGAAAGCAACAAGTACCAA+GGG 0.583635 2.1:+32979101 MS.gene071541:CDS
AGCCGAGATGATTGGACGAG+TGG 0.583728 2.1:+32979649 MS.gene071541:CDS
ACTTCCATCAACATACTCAT+GGG 0.589217 2.1:+32978485 MS.gene071541:CDS
ATCCACTCGTCCAATCATCT+CGG 0.591466 2.1:-32979651 None:intergenic
AAGCAACAAGTACCAAGGGA+TGG 0.592367 2.1:+32979105 MS.gene071541:CDS
TGAGTTCAGGTCAACGCTAG+TGG 0.593166 2.1:+32979611 MS.gene071541:intron
ATAAGCAACATTCTGATCAG+TGG 0.595793 2.1:-32977314 None:intergenic
ATATTCCAAATCCTCAGCTA+CGG 0.598835 2.1:+32979750 MS.gene071541:CDS
GTAAAATCAAACCTGTACAT+TGG 0.599665 2.1:-32980085 None:intergenic
GAAAATCAAGGATATTATGT+CGG 0.602073 2.1:+32977661 MS.gene071541:CDS
TGTACATTGGTATGTGGCAT+AGG 0.603452 2.1:-32980072 None:intergenic
TTGAGCATTTCAATACCTTG+CGG 0.609987 2.1:-32979952 None:intergenic
AGAATGATTACAGGTTATGG+TGG 0.612198 2.1:+32977622 MS.gene071541:intron
AAAGGTACTTTAAACTCTGG+AGG 0.617094 2.1:+32979212 MS.gene071541:CDS
TGAGTTGCTCACATTAGATG+AGG 0.617233 2.1:-32978637 None:intergenic
TGATACTGGACATCGACACC+AGG 0.618053 2.1:-32978390 None:intergenic
ATTTGGTTGGAAAATCAGGA+AGG 0.619406 2.1:-32979292 None:intergenic
CATAAGGTGAAATATAGCCA+GGG 0.620198 2.1:-32978455 None:intergenic
ACACATGATCTTGCATCAGA+TGG 0.625382 2.1:-32977229 None:intergenic
TAAGTTGGTTGTAAAGAACA+TGG 0.629871 2.1:+32980803 MS.gene071541:CDS
TATGAAAGCAACAAGTACCA+AGG 0.634095 2.1:+32979100 MS.gene071541:CDS
CATACAATCAAGGAAAGAGT+GGG 0.635967 2.1:+32979051 MS.gene071541:CDS
TCAGGATGCACAGAATCGAA+TGG 0.637168 2.1:+32979433 MS.gene071541:CDS
AGGATAATATGCCGTAGCTG+AGG 0.638343 2.1:-32979761 None:intergenic
ATGAATAAGAAGAAGCTGCA+TGG 0.646230 2.1:+32976969 MS.gene071541:CDS
GAGTTGCTCACATTAGATGA+GGG 0.650819 2.1:-32978636 None:intergenic
TGGCAGCAAGATAAATGGAA+CGG 0.653548 2.1:+32979695 MS.gene071541:CDS
AGCAACTCATCAGAAGTGAA+GGG 0.655536 2.1:+32978651 MS.gene071541:CDS
AAATAGTAGAGACACTCAAG+AGG 0.657180 2.1:+32979811 MS.gene071541:CDS
GAAGCTGAAACTCAGAAACA+AGG 0.666505 2.1:+32979139 MS.gene071541:CDS
ACCACACAAGATGTAGCACA+AGG 0.668664 2.1:+32978519 MS.gene071541:CDS
GTTGAAAGACGGAACCAGGA+GGG 0.679018 2.1:-32978419 None:intergenic
GAAAAGATCGATCTACCACT+CGG 0.689012 2.1:-32978570 None:intergenic
ATAAGGTGAAATATAGCCAG+GGG 0.699657 2.1:-32978454 None:intergenic
GTTGAGAAAGTGAATGACTG+AGG 0.708180 2.1:+32980840 MS.gene071541:CDS
TGAACATAATAATTCCAACA+TGG 0.712248 2.1:+32977007 MS.gene071541:CDS
TGTTGAAAGACGGAACCAGG+AGG 0.716372 2.1:-32978420 None:intergenic
GTTGGTTGTAAAGAACATGG+AGG 0.739574 2.1:+32980806 MS.gene071541:CDS
CCACACAAGATGTAGCACAA+GGG 0.750655 2.1:+32978520 MS.gene071541:CDS
ATCAGCTGTAAAGAACATGG+AGG 0.773499 2.1:+32980776 MS.gene071541:CDS
GAATTGGCCAGTAAACCGAG+TGG 0.774424 2.1:+32978555 MS.gene071541:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGACTTCTAAATAAATTAT+TGG - chr2.1:32980454-32980473 None:intergenic 15.0%
!! ATAGTAGAAAAATAAAGAAT+TGG - chr2.1:32980409-32980428 None:intergenic 15.0%
!! ATATAAATGAAAAGTAAAGA+AGG - chr2.1:32980511-32980530 None:intergenic 15.0%
!! CATTTATTAAATATTGTGAA+AGG - chr2.1:32980267-32980286 None:intergenic 15.0%
!! GAAAATAACATGTTAATAAA+AGG + chr2.1:32978064-32978083 MS.gene071541:intron 15.0%
!! TAATTGTAACACAATTAAAA+AGG - chr2.1:32980484-32980503 None:intergenic 15.0%
!! TAGTAGAAAAATAAAGAATT+GGG - chr2.1:32980408-32980427 None:intergenic 15.0%
!! TATAAATGAAAAGTAAAGAA+GGG - chr2.1:32980510-32980529 None:intergenic 15.0%
!!! AATTCTTTATTTTTCTACTA+TGG + chr2.1:32980408-32980427 MS.gene071541:intron 15.0%
!!! AATTTTTGTTGGTTTTATTT+AGG + chr2.1:32978284-32978303 MS.gene071541:intron 15.0%
!!! ATGTTTTCTTATTGTATTTT+TGG + chr2.1:32977157-32977176 MS.gene071541:intron 15.0%
!!! GTAAATATCTAAATTTTTGT+TGG + chr2.1:32978273-32978292 MS.gene071541:intron 15.0%
!!! TCTTTGCTTATATATAATTT+TGG + chr2.1:32980706-32980725 MS.gene071541:intron 15.0%
!!! TTGAATTCTGAAATAAATTT+GGG + chr2.1:32978023-32978042 MS.gene071541:intron 15.0%
!!! TTTCTCTTTCTAAAATTATA+AGG - chr2.1:32978852-32978871 None:intergenic 15.0%
!!! TTTGAATTCTGAAATAAATT+TGG + chr2.1:32978022-32978041 MS.gene071541:intron 15.0%
!! AAACAATAGTTAAAACAGAA+CGG - chr2.1:32978759-32978778 None:intergenic 20.0%
!! AATGTCAAAAAAGAATTCAT+TGG - chr2.1:32980184-32980203 None:intergenic 20.0%
!! AGATTATTCTAAATAGTTTG+TGG + chr2.1:32978945-32978964 MS.gene071541:intron 20.0%
!! ATGAGTAGATTATGAAAATT+TGG - chr2.1:32980541-32980560 None:intergenic 20.0%
!! CAAAAACTAAAGAAATGAAA+GGG - chr2.1:32980678-32980697 None:intergenic 20.0%
!! CAAAGTAATTAATAACTCTT+TGG + chr2.1:32980350-32980369 MS.gene071541:intron 20.0%
!! TGAGTAGATTATGAAAATTT+GGG - chr2.1:32980540-32980559 None:intergenic 20.0%
!!! ATTTGTTGTATGTTATGTTA+AGG + chr2.1:32977180-32977199 MS.gene071541:intron 20.0%
!!! ATTTTAGAAAGAGAAATAAG+TGG + chr2.1:32978856-32978875 MS.gene071541:intron 20.0%
!!! TCATGATAATTGTGTTATTA+TGG + chr2.1:32977745-32977764 MS.gene071541:intron 20.0%
!!! TGTTCTTCTTGTTTATTTTT+TGG + chr2.1:32976842-32976861 MS.gene071541:intron 20.0%
!!! TTCTTTTTTGACATTATTGA+TGG + chr2.1:32980189-32980208 MS.gene071541:intron 20.0%
!!! TTTATGTTTTTCCTTTCTTA+CGG + chr2.1:32977598-32977617 MS.gene071541:intron 20.0%
! AACTATATATTGAACTGTTG+GGG + chr2.1:32978879-32978898 MS.gene071541:intron 25.0%
! AACTCCAAATTATTCCAAAA+AGG - chr2.1:32980321-32980340 None:intergenic 25.0%
! AAGATACAGAAGAAATAACT+AGG - chr2.1:32979884-32979903 None:intergenic 25.0%
! ACTCCAAATTATTCCAAAAA+GGG - chr2.1:32980320-32980339 None:intergenic 25.0%
! ATGAGCAAATAAAACACAAA+CGG - chr2.1:32979543-32979562 None:intergenic 25.0%
! GAAAATCAAGGATATTATGT+CGG + chr2.1:32977661-32977680 MS.gene071541:CDS 25.0%
! GAACTATATATTGAACTGTT+GGG + chr2.1:32978878-32978897 MS.gene071541:intron 25.0%
! GCAAAAACTAAAGAAATGAA+AGG - chr2.1:32980679-32980698 None:intergenic 25.0%
! GTTGAAGAAACATCTAATAT+TGG - chr2.1:32978684-32978703 None:intergenic 25.0%
! TAACATTCAAGGAAAAAATG+TGG + chr2.1:32978166-32978185 MS.gene071541:intron 25.0%
! TAAGCATATATCTTCAGAAA+GGG + chr2.1:32977948-32977967 MS.gene071541:intron 25.0%
! TATGTTAAGGTTTCTTCAAA+GGG + chr2.1:32977193-32977212 MS.gene071541:intron 25.0%
! TATTATGGATATTACTATCC+AGG + chr2.1:32977349-32977368 MS.gene071541:CDS 25.0%
! TATTGCATTACACATGAAAA+TGG + chr2.1:32978096-32978115 MS.gene071541:intron 25.0%
! TCAGATTCAAGTATTTATAC+AGG - chr2.1:32977833-32977852 None:intergenic 25.0%
! TGAACATAATAATTCCAACA+TGG + chr2.1:32977007-32977026 MS.gene071541:CDS 25.0%
! TGTAACACAATTAAAAAGGT+GGG - chr2.1:32980480-32980499 None:intergenic 25.0%
! TTAAGCATATATCTTCAGAA+AGG + chr2.1:32977947-32977966 MS.gene071541:intron 25.0%
! TTAGTAAGAAGTAAGAACTT+TGG - chr2.1:32980131-32980150 None:intergenic 25.0%
! TTATGTTAAGGTTTCTTCAA+AGG + chr2.1:32977192-32977211 MS.gene071541:intron 25.0%
! TTGTAACACAATTAAAAAGG+TGG - chr2.1:32980481-32980500 None:intergenic 25.0%
!! AAGTTTTCTACATACAATCA+AGG + chr2.1:32979041-32979060 MS.gene071541:CDS 25.0%
!! TTTAGAATAGTTTGTCAACT+AGG - chr2.1:32980290-32980309 None:intergenic 25.0%
!!! AAGAAATGAAAGGGTTTTTT+CGG - chr2.1:32980669-32980688 None:intergenic 25.0%
!!! ACTTATTTTTACTCGAAACT+CGG + chr2.1:32980596-32980615 MS.gene071541:intron 25.0%
!!! ATACCCTTTTTGGAATAATT+TGG + chr2.1:32980314-32980333 MS.gene071541:intron 25.0%
!!! ATTAGGAAAGTTGTTTTGAT+AGG - chr2.1:32979081-32979100 None:intergenic 25.0%
!!! ATTTTTTCCTTGAATGTTAC+AGG - chr2.1:32978165-32978184 None:intergenic 25.0%
!!! TTAGGAAAGTTGTTTTGATA+GGG - chr2.1:32979080-32979099 None:intergenic 25.0%
!!! TTCTGAAATAAATTTGGGAT+TGG + chr2.1:32978028-32978047 MS.gene071541:intron 25.0%
!!! TTTTGATAATTGTTGAGTTC+AGG + chr2.1:32979598-32979617 MS.gene071541:intron 25.0%
!!! TTTTGGAATAATTTGGAGTT+GGG + chr2.1:32980321-32980340 MS.gene071541:intron 25.0%
!!! TTTTTGGAATAATTTGGAGT+TGG + chr2.1:32980320-32980339 MS.gene071541:intron 25.0%
AGATCATGTGTATCATCAAT+AGG + chr2.1:32977241-32977260 MS.gene071541:CDS 30.0%
AGGGAATCGTTATAATGAAT+TGG + chr2.1:32978539-32978558 MS.gene071541:CDS 30.0%
CAACCACAATTATGCAAAAA+TGG - chr2.1:32980237-32980256 None:intergenic 30.0%
GAAGAAACATCTAATATTGG+TGG - chr2.1:32978681-32978700 None:intergenic 30.0%
GGAACTATATATTGAACTGT+TGG + chr2.1:32978877-32978896 MS.gene071541:intron 30.0%
GTAAAATCAAACCTGTACAT+TGG - chr2.1:32980088-32980107 None:intergenic 30.0%
TAATCATTCTACCGTAAGAA+AGG - chr2.1:32977612-32977631 None:intergenic 30.0%
TACCGAAAAGAAAAGGAATA+CGG - chr2.1:32979480-32979499 None:intergenic 30.0%
TATTCTGCTGGTAGTTATTA+TGG + chr2.1:32977334-32977353 MS.gene071541:CDS 30.0%
TCATATTTGGTTGGAAAATC+AGG - chr2.1:32979299-32979318 None:intergenic 30.0%
TGAGCAAATAAAACACAAAC+GGG - chr2.1:32979542-32979561 None:intergenic 30.0%
! AGTGGATTTCAACAAAAGTA+TGG + chr2.1:32979667-32979686 MS.gene071541:CDS 30.0%
! ATTGATAACACTGACGAATA+GGG - chr2.1:32977395-32977414 None:intergenic 30.0%
! CATTTTTGCATAATTGTGGT+TGG + chr2.1:32980235-32980254 MS.gene071541:intron 30.0%
! CTGATAATTTGCATTGCATT+AGG + chr2.1:32977849-32977868 MS.gene071541:intron 30.0%
! GAAAAGTGCATGATCATATT+TGG - chr2.1:32979312-32979331 None:intergenic 30.0%
! TCAACAAAAGTATGGATTTC+TGG + chr2.1:32979675-32979694 MS.gene071541:CDS 30.0%
! TCTAAACTTGATACCCTTTT+TGG + chr2.1:32980304-32980323 MS.gene071541:intron 30.0%
!! AATAGTTTGTGGTGTTTTTC+AGG + chr2.1:32978956-32978975 MS.gene071541:intron 30.0%
!! AGAACTTTGGAATAAGAACA+AGG - chr2.1:32980118-32980137 None:intergenic 30.0%
!! GTACTTGTTGCTTTCATATT+AGG - chr2.1:32979098-32979117 None:intergenic 30.0%
!! TTATAATGTGCCATTTGACA+GGG - chr2.1:32979727-32979746 None:intergenic 30.0%
!! TTTATAATGTGCCATTTGAC+AGG - chr2.1:32979728-32979747 None:intergenic 30.0%
!!! AATTTGGGATTGGCTAATTT+TGG + chr2.1:32978038-32978057 MS.gene071541:intron 30.0%
!!! TAGGAAAGTTGTTTTGATAG+GGG - chr2.1:32979079-32979098 None:intergenic 30.0%
AAATAGTAGAGACACTCAAG+AGG + chr2.1:32979811-32979830 MS.gene071541:CDS 35.0%
AATTGACCAGATATGCAACA+AGG - chr2.1:32977792-32977811 None:intergenic 35.0%
ACATACAATCAAGGAAAGAG+TGG + chr2.1:32979050-32979069 MS.gene071541:CDS 35.0%
ACCGAAAAGAAAAGGAATAC+GGG - chr2.1:32979479-32979498 None:intergenic 35.0%
ACTTCCATCAACATACTCAT+GGG + chr2.1:32978485-32978504 MS.gene071541:CDS 35.0%
AGAATGATTACAGGTTATGG+TGG + chr2.1:32977622-32977641 MS.gene071541:intron 35.0%
AGTGCATGATCATATTTGGT+TGG - chr2.1:32979308-32979327 None:intergenic 35.0%
ATAAGCAACATTCTGATCAG+TGG - chr2.1:32977317-32977336 None:intergenic 35.0%
ATAAGGTGAAATATAGCCAG+GGG - chr2.1:32978457-32978476 None:intergenic 35.0%
ATATTCCAAATCCTCAGCTA+CGG + chr2.1:32979750-32979769 MS.gene071541:CDS 35.0%
ATGAAAGCAACAAGTACCAA+GGG + chr2.1:32979101-32979120 MS.gene071541:CDS 35.0%
ATGAATAAGAAGAAGCTGCA+TGG + chr2.1:32976969-32976988 MS.gene071541:CDS 35.0%
ATGGCTGCTGAATTGAAAAA+AGG + chr2.1:32976806-32976825 MS.gene071541:CDS 35.0%
ATTTGGTTGGAAAATCAGGA+AGG - chr2.1:32979295-32979314 None:intergenic 35.0%
CAATAGTTAAAACAGAACGG+AGG - chr2.1:32978756-32978775 None:intergenic 35.0%
CATAAGGTGAAATATAGCCA+GGG - chr2.1:32978458-32978477 None:intergenic 35.0%
CATACAATCAAGGAAAGAGT+GGG + chr2.1:32979051-32979070 MS.gene071541:CDS 35.0%
CATATCAGCTGTAAAGAACA+TGG + chr2.1:32980773-32980792 MS.gene071541:CDS 35.0%
CCTAGAACAGTTAATGCAAA+AGG + chr2.1:32979194-32979213 MS.gene071541:CDS 35.0%
CTCACAACAACATGAAACAA+TGG - chr2.1:32977895-32977914 None:intergenic 35.0%
GATAGCATACCGAAAAGAAA+AGG - chr2.1:32979487-32979506 None:intergenic 35.0%
GGTAGAATGATTACAGGTTA+TGG + chr2.1:32977619-32977638 MS.gene071541:intron 35.0%
GTATGTAGAAAACTTTGCGA+CGG - chr2.1:32979036-32979055 None:intergenic 35.0%
TACTTCCATCAACATACTCA+TGG + chr2.1:32978484-32978503 MS.gene071541:CDS 35.0%
TATGAAAGCAACAAGTACCA+AGG + chr2.1:32979100-32979119 MS.gene071541:CDS 35.0%
TATGGAGAGCAAGAAAATCA+AGG + chr2.1:32977649-32977668 MS.gene071541:CDS 35.0%
TATGTAGAAAACTTTGCGAC+GGG - chr2.1:32979035-32979054 None:intergenic 35.0%
TCACTTAATGAGCAGAATCA+AGG + chr2.1:32979170-32979189 MS.gene071541:CDS 35.0%
TCCAATTGGTTGTTGAAAGA+CGG - chr2.1:32978433-32978452 None:intergenic 35.0%
TCTTACGGTAGAATGATTAC+AGG + chr2.1:32977613-32977632 MS.gene071541:intron 35.0%
TGTATCGAGAACATCGATAT+TGG + chr2.1:32979990-32980009 MS.gene071541:CDS 35.0%
TTAGACAGCGACAAATAAAC+AGG - chr2.1:32978787-32978806 None:intergenic 35.0%
TTCACTTTCTCAACCAACTT+AGG - chr2.1:32980834-32980853 None:intergenic 35.0%
TTGAGCATTTCAATACCTTG+CGG - chr2.1:32979955-32979974 None:intergenic 35.0%
! AAGTTTCTTGAGCTGGTTTA+TGG + chr2.1:32977714-32977733 MS.gene071541:intron 35.0%
! ATGTTGATCTGTCCTGATTT+TGG - chr2.1:32979270-32979289 None:intergenic 35.0%
! CCTTTTGCATTAACTGTTCT+AGG - chr2.1:32979197-32979216 None:intergenic 35.0%
! GATTGATAACACTGACGAAT+AGG - chr2.1:32977396-32977415 None:intergenic 35.0%
! GTGTCTCTACTATTTGTTAC+AGG - chr2.1:32979806-32979825 None:intergenic 35.0%
! TCCCGTATTCCTTTTCTTTT+CGG + chr2.1:32979475-32979494 MS.gene071541:CDS 35.0%
! TTAAACTCTGGAGGTAATTC+TGG + chr2.1:32979221-32979240 MS.gene071541:CDS 35.0%
! TTTTGCATAATTGTGGTTGG+AGG + chr2.1:32980238-32980257 MS.gene071541:intron 35.0%
!! AAAGGTACTTTAAACTCTGG+AGG + chr2.1:32979212-32979231 MS.gene071541:CDS 35.0%
!! ATTTCTGGCAGCAAGATAAA+TGG + chr2.1:32979690-32979709 MS.gene071541:CDS 35.0%
!! CTATGGTTGATGTGTTCTTT+TGG + chr2.1:32980425-32980444 MS.gene071541:intron 35.0%
!! GCAAAAGGTACTTTAAACTC+TGG + chr2.1:32979209-32979228 MS.gene071541:CDS 35.0%
!! GGACCATTTTTGCATAATTG+TGG + chr2.1:32980231-32980250 MS.gene071541:intron 35.0%
!! GTTACCTTGTTTGCTTGTTT+TGG - chr2.1:32978726-32978745 None:intergenic 35.0%
!!! AATGAAAGGGTTTTTTCGGT+TGG - chr2.1:32980665-32980684 None:intergenic 35.0%
!!! ACAGGTTATGGTGGATTTTA+TGG + chr2.1:32977631-32977650 MS.gene071541:intron 35.0%
!!! GCTTCTGGTAGTTTTAAAGA+AGG + chr2.1:32977268-32977287 MS.gene071541:CDS 35.0%
!!! TTTTTTCGGTTGGACTAGTT+TGG - chr2.1:32980655-32980674 None:intergenic 35.0%
AAAACAGAACGGAGGAAGTA+AGG - chr2.1:32978748-32978767 None:intergenic 40.0%
AACCAGCTCAAGAAACTTAC+AGG - chr2.1:32977712-32977731 None:intergenic 40.0%
ACACATGATCTTGCATCAGA+TGG - chr2.1:32977232-32977251 None:intergenic 40.0%
ACGGATATTTCCCTGTCAAA+TGG + chr2.1:32979714-32979733 MS.gene071541:CDS 40.0%
AGCAACTCATCAGAAGTGAA+GGG + chr2.1:32978651-32978670 MS.gene071541:CDS 40.0%
ATCAGCTGTAAAGAACATGG+AGG + chr2.1:32980776-32980795 MS.gene071541:CDS 40.0%
ATCCTGTAAGTTTCTTGAGC+TGG + chr2.1:32977707-32977726 MS.gene071541:intron 40.0%
ATTGCATCTGAATGGAGAAC+AGG - chr2.1:32978996-32979015 None:intergenic 40.0%
CAAACCTGTACATTGGTATG+TGG - chr2.1:32980081-32980100 None:intergenic 40.0%
CAACATTCTGATCAGTGGAT+TGG - chr2.1:32977312-32977331 None:intergenic 40.0%
CAGAATCGAATGGAAGAGAA+AGG + chr2.1:32979443-32979462 MS.gene071541:CDS 40.0%
CATTCAGATGCAATGCCAAA+GGG + chr2.1:32979002-32979021 MS.gene071541:CDS 40.0%
CCATAAGGTGAAATATAGCC+AGG - chr2.1:32978459-32978478 None:intergenic 40.0%
CCTGGCTATATTTCACCTTA+TGG + chr2.1:32978456-32978475 MS.gene071541:CDS 40.0%
CTCTGTTCTGTTAAGACCTA+CGG + chr2.1:32979516-32979535 MS.gene071541:intron 40.0%
CTGATGTCCTGTAACATTCA+AGG + chr2.1:32978155-32978174 MS.gene071541:intron 40.0%
GAAAAGATCGATCTACCACT+CGG - chr2.1:32978573-32978592 None:intergenic 40.0%
GAAGACTTAACAAGTGCACT+TGG + chr2.1:32980741-32980760 MS.gene071541:CDS 40.0%
GAAGCTGAAACTCAGAAACA+AGG + chr2.1:32979139-32979158 MS.gene071541:CDS 40.0%
GAATCCCATGAGTATGTTGA+TGG - chr2.1:32978492-32978511 None:intergenic 40.0%
GAGCATCAAGTACGATGTAT+GGG + chr2.1:32979370-32979389 MS.gene071541:CDS 40.0%
GAGTTGCTCACATTAGATGA+GGG - chr2.1:32978639-32978658 None:intergenic 40.0%
GATGGAAGTAACTCACCATA+AGG - chr2.1:32978474-32978493 None:intergenic 40.0%
GCTTGTGATCATTATTCTCG+AGG - chr2.1:32979784-32979803 None:intergenic 40.0%
GTACACCTAATGGCAATAAG+AGG + chr2.1:32979396-32979415 MS.gene071541:CDS 40.0%
GTTAAGGTTTCTTCAAAGGG+TGG + chr2.1:32977196-32977215 MS.gene071541:intron 40.0%
GTTGGTTGTAAAGAACATGG+AGG + chr2.1:32980806-32980825 MS.gene071541:CDS 40.0%
TACCTTGCGGAAAATGAATC+TGG - chr2.1:32979942-32979961 None:intergenic 40.0%
TAGGTCATGCAAGCAGATAA+TGG + chr2.1:32978303-32978322 MS.gene071541:intron 40.0%
TATGCCACATACCAATGTAC+AGG + chr2.1:32980074-32980093 MS.gene071541:CDS 40.0%
TCAATGGTGACACCAAAATC+AGG + chr2.1:32979255-32979274 MS.gene071541:CDS 40.0%
TCATCAATAGGAGATGCTTC+TGG + chr2.1:32977253-32977272 MS.gene071541:CDS 40.0%
TCCGTCTTTCAACAACCAAT+TGG + chr2.1:32978429-32978448 MS.gene071541:CDS 40.0%
TCTTATGTCTATCTCATGCC+AGG + chr2.1:32978327-32978346 MS.gene071541:CDS 40.0%
TGAGTTGCTCACATTAGATG+AGG - chr2.1:32978640-32978659 None:intergenic 40.0%
TGGCAGCAAGATAAATGGAA+CGG + chr2.1:32979695-32979714 MS.gene071541:CDS 40.0%
TGTACATTGGTATGTGGCAT+AGG - chr2.1:32980075-32980094 None:intergenic 40.0%
TTTGTTCAGATTCCGCTATG+CGG + chr2.1:32977518-32977537 MS.gene071541:intron 40.0%
! AACGCTAGTGGTCAATTTTG+TGG + chr2.1:32979623-32979642 MS.gene071541:CDS 40.0%
! AGAGCATCAAGTACGATGTA+TGG + chr2.1:32979369-32979388 MS.gene071541:CDS 40.0%
! CAGAATGTTGCTTATTCTGC+TGG + chr2.1:32977322-32977341 MS.gene071541:CDS 40.0%
! TAGTTGCCTTGTTGCATATC+TGG + chr2.1:32977783-32977802 MS.gene071541:intron 40.0%
! TTCCAGATTCATTTTCCGCA+AGG + chr2.1:32979937-32979956 MS.gene071541:intron 40.0%
! TTTTTACGAAACCCGTCAGA+AGG + chr2.1:32980023-32980042 MS.gene071541:CDS 40.0%
!! TCTGGAGATAAGAGTGTCAA+TGG + chr2.1:32979239-32979258 MS.gene071541:CDS 40.0%
!!! GTTTTTCAGGCATCCATTTC+TGG + chr2.1:32978969-32978988 MS.gene071541:intron 40.0%
AAGCAACAAGTACCAAGGGA+TGG + chr2.1:32979105-32979124 MS.gene071541:CDS 45.0%
AAGGTTTCTTCAAAGGGTGG+TGG + chr2.1:32977199-32977218 MS.gene071541:intron 45.0%
ACATTAACGCTACCGCATAG+CGG - chr2.1:32977533-32977552 None:intergenic 45.0%
ACCACACAAGATGTAGCACA+AGG + chr2.1:32978519-32978538 MS.gene071541:CDS 45.0%
ACTGACGAATAGGGAACCAT+GGG - chr2.1:32977386-32977405 None:intergenic 45.0%
AGCAACAAGTACCAAGGGAT+GGG + chr2.1:32979106-32979125 MS.gene071541:CDS 45.0%
AGGACATCAGAGATGATGTC+GGG - chr2.1:32978145-32978164 None:intergenic 45.0%
AGGATAATATGCCGTAGCTG+AGG - chr2.1:32979764-32979783 None:intergenic 45.0%
ATAAAACACAAACGGGCCGT+AGG - chr2.1:32979535-32979554 None:intergenic 45.0%
ATATAGCCAGGGGATCCAAT+TGG - chr2.1:32978447-32978466 None:intergenic 45.0%
ATATGCCGTAGCTGAGGATT+TGG - chr2.1:32979758-32979777 None:intergenic 45.0%
ATCCACTCGTCCAATCATCT+CGG - chr2.1:32979654-32979673 None:intergenic 45.0%
ATGGAGAACAGGACCAGAAA+TGG - chr2.1:32978985-32979004 None:intergenic 45.0%
CACATGCAAGCTTACCATGT+TGG - chr2.1:32977024-32977043 None:intergenic 45.0%
CAGGACATCAGAGATGATGT+CGG - chr2.1:32978146-32978165 None:intergenic 45.0%
CCACACAAGATGTAGCACAA+GGG + chr2.1:32978520-32978539 MS.gene071541:CDS 45.0%
CCAGCCAAAACAAGCAAACA+AGG + chr2.1:32978719-32978738 MS.gene071541:CDS 45.0%
CCATTCAGATGCAATGCCAA+AGG + chr2.1:32979001-32979020 MS.gene071541:CDS 45.0%
CCTTTGGCATTGCATCTGAA+TGG - chr2.1:32979004-32979023 None:intergenic 45.0%
GAACATGGAGGATCCTAAGT+TGG + chr2.1:32980788-32980807 MS.gene071541:CDS 45.0%
GAGCAACTCATCAGAAGTGA+AGG + chr2.1:32978650-32978669 MS.gene071541:CDS 45.0%
GGATGAGTGCATGTGATTGT+GGG + chr2.1:32980210-32980229 MS.gene071541:intron 45.0%
TACTTTCCTGTGAACACACC+TGG + chr2.1:32978372-32978391 MS.gene071541:CDS 45.0%
TCAGGATGCACAGAATCGAA+TGG + chr2.1:32979433-32979452 MS.gene071541:CDS 45.0%
TCGAGCCTCTTATTGCCATT+AGG - chr2.1:32979404-32979423 None:intergenic 45.0%
TCTCTTGCATGACCTTCTGA+CGG - chr2.1:32980038-32980057 None:intergenic 45.0%
TGAACTGTTGGGGATTTCGT+AGG + chr2.1:32978889-32978908 MS.gene071541:intron 45.0%
TGGATGAGTGCATGTGATTG+TGG + chr2.1:32980209-32980228 MS.gene071541:intron 45.0%
! TTTTCTTCGCAGAGTCGTAC+TGG + chr2.1:32978588-32978607 MS.gene071541:CDS 45.0%
!!! CCTTGTTTGCTTGTTTTGGC+TGG - chr2.1:32978722-32978741 None:intergenic 45.0%
!!! TTTATTTTTTTTATATTTTG+CGG + chr2.1:32977071-32977090 MS.gene071541:intron 5.0%
ACGAATAGGGAACCATGGGA+GGG - chr2.1:32977382-32977401 None:intergenic 50.0%
CAACAACCAATTGGATCCCC+TGG + chr2.1:32978438-32978457 MS.gene071541:CDS 50.0%
CACTGACGAATAGGGAACCA+TGG - chr2.1:32977387-32977406 None:intergenic 50.0%
CAGGAGGGTAAACCTGATAC+TGG - chr2.1:32978407-32978426 None:intergenic 50.0%
CAGTATCAGGTTTACCCTCC+TGG + chr2.1:32978405-32978424 MS.gene071541:CDS 50.0%
CCCTTGTGCTACATCTTGTG+TGG - chr2.1:32978523-32978542 None:intergenic 50.0%
CGATCTACCACTCGGTTTAC+TGG - chr2.1:32978565-32978584 None:intergenic 50.0%
CTCAGTACTAACCCATCCCT+TGG - chr2.1:32979120-32979139 None:intergenic 50.0%
CTCATGCCAGGATATCAGAC+TGG + chr2.1:32978339-32978358 MS.gene071541:CDS 50.0%
CTCTTGCATGACCTTCTGAC+GGG - chr2.1:32980037-32980056 None:intergenic 50.0%
GAATTGGCCAGTAAACCGAG+TGG + chr2.1:32978555-32978574 MS.gene071541:CDS 50.0%
GAGGCTCGACAATGCATTTC+AGG + chr2.1:32979415-32979434 MS.gene071541:CDS 50.0%
GAGTAGCCAGTCTGATATCC+TGG - chr2.1:32978348-32978367 None:intergenic 50.0%
GCTATGCGGTAGCGTTAATG+TGG + chr2.1:32977532-32977551 MS.gene071541:intron 50.0%
GGTTGTTGAAAGACGGAACC+AGG - chr2.1:32978426-32978445 None:intergenic 50.0%
GTATGGGCGAGTACACCTAA+TGG + chr2.1:32979386-32979405 MS.gene071541:CDS 50.0%
GTTGAAAGACGGAACCAGGA+GGG - chr2.1:32978422-32978441 None:intergenic 50.0%
TGAGTTCAGGTCAACGCTAG+TGG + chr2.1:32979611-32979630 MS.gene071541:intron 50.0%
TGATACTGGACATCGACACC+AGG - chr2.1:32978393-32978412 None:intergenic 50.0%
TGTGGAGTAGCCGAGATGAT+TGG + chr2.1:32979641-32979660 MS.gene071541:CDS 50.0%
TGTTGAAAGACGGAACCAGG+AGG - chr2.1:32978423-32978442 None:intergenic 50.0%
!! TGGTGTCGATGTCCAGTATC+AGG + chr2.1:32978392-32978411 MS.gene071541:CDS 50.0%
!! TTATGTCGGCGCTGATGCTA+TGG + chr2.1:32977675-32977694 MS.gene071541:CDS 50.0%
AGCCGAGATGATTGGACGAG+TGG + chr2.1:32979649-32979668 MS.gene071541:CDS 55.0%
GACGAATAGGGAACCATGGG+AGG - chr2.1:32977383-32977402 None:intergenic 55.0%
GCGACGGGAAAAGAACCCTT+TGG - chr2.1:32979020-32979039 None:intergenic 55.0%
TCGACACCAGGTGTGTTCAC+AGG - chr2.1:32978381-32978400 None:intergenic 55.0%
CCATGGGAGGGAAGCTAACC+TGG - chr2.1:32977370-32977389 None:intergenic 60.0%
! TCGCAGAGTCGTACTGGCAG+TGG + chr2.1:32978594-32978613 MS.gene071541:CDS 60.0%
!! CCAGGTTAGCTTCCCTCCCA+TGG + chr2.1:32977367-32977386 MS.gene071541:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 32976806 32980860 32976806 ID=MS.gene071541
chr2.1 mRNA 32976806 32980860 32976806 ID=MS.gene071541.t1;Parent=MS.gene071541
chr2.1 exon 32976806 32976827 32976806 ID=MS.gene071541.t1.exon1;Parent=MS.gene071541.t1
chr2.1 CDS 32976806 32976827 32976806 ID=cds.MS.gene071541.t1;Parent=MS.gene071541.t1
chr2.1 exon 32976958 32977028 32976958 ID=MS.gene071541.t1.exon2;Parent=MS.gene071541.t1
chr2.1 CDS 32976958 32977028 32976958 ID=cds.MS.gene071541.t1;Parent=MS.gene071541.t1
chr2.1 exon 32977202 32977370 32977202 ID=MS.gene071541.t1.exon3;Parent=MS.gene071541.t1
chr2.1 CDS 32977202 32977370 32977202 ID=cds.MS.gene071541.t1;Parent=MS.gene071541.t1
chr2.1 exon 32977635 32977711 32977635 ID=MS.gene071541.t1.exon4;Parent=MS.gene071541.t1
chr2.1 CDS 32977635 32977711 32977635 ID=cds.MS.gene071541.t1;Parent=MS.gene071541.t1
chr2.1 exon 32978306 32978740 32978306 ID=MS.gene071541.t1.exon5;Parent=MS.gene071541.t1
chr2.1 CDS 32978306 32978740 32978306 ID=cds.MS.gene071541.t1;Parent=MS.gene071541.t1
chr2.1 exon 32978978 32979496 32978978 ID=MS.gene071541.t1.exon6;Parent=MS.gene071541.t1
chr2.1 CDS 32978978 32979496 32978978 ID=cds.MS.gene071541.t1;Parent=MS.gene071541.t1
chr2.1 exon 32979620 32979832 32979620 ID=MS.gene071541.t1.exon7;Parent=MS.gene071541.t1
chr2.1 CDS 32979620 32979832 32979620 ID=cds.MS.gene071541.t1;Parent=MS.gene071541.t1
chr2.1 exon 32979943 32980095 32979943 ID=MS.gene071541.t1.exon8;Parent=MS.gene071541.t1
chr2.1 CDS 32979943 32980095 32979943 ID=cds.MS.gene071541.t1;Parent=MS.gene071541.t1
chr2.1 exon 32980735 32980860 32980735 ID=MS.gene071541.t1.exon9;Parent=MS.gene071541.t1
chr2.1 CDS 32980735 32980860 32980735 ID=cds.MS.gene071541.t1;Parent=MS.gene071541.t1
Gene Sequence

>MS.gene071541

ATGGCTGCTGAATTGAAAAAAGGTATTTGTTTTCTTTGTTCTTCTTGTTTATTTTTTGGTTTAGATTTAAATTTTATTTCAATTTGATTATGATTTGAATATTTTGATTTTTTTTTTAATAAAAATGAGATTTTTACTGTGTTTTTTTACAGCTGCAGATGAAATGAATAAGAAGAAGCTGCATGGTGATTCTTCAACAGCTGAACATAATAATTCCAACATGGTAAGCTTGCATGTGATTTCTAAATTTTTATTTTATTTTTGTTTTATTTTTTTTATATTTTGCGGCTTAATTTTGAATTTTGAAATTAACTGTTTCATTAGTTATATGCATGAAACTTGAAGAATTACATGTTTTCTTATTGTATTTTTGGATTTGTTGTATGTTATGTTAAGGTTTCTTCAAAGGGTGGTGGAAGTTCACCATCTGATGCAAGATCATGTGTATCATCAATAGGAGATGCTTCTGGTAGTTTTAAAGAAGGCGATGTTGATCATGAATTCCAATCCACTGATCAGAATGTTGCTTATTCTGCTGGTAGTTATTATGGATATTACTATCCAGGTTAGCTTCCCTCCCATGGTTCCCTATTCGTCAGTGTTATCAATCGCAGATCGCAGAAACTAGCAGTTTGTTCAAATTATGATATGCTATATCACAGTTGTTGATGCTATTTGACAACAGTTTGTTTAAAATAGAGAACAGTAGCGATTTGTTCAGATTCCGCTATGCGGTAGCGTTAATGTGGCTGCTATTTGACAACACTGCTATTCGTTTATGTTGATTGTATATTTATGTTTTTCCTTTCTTACGGTAGAATGATTACAGGTTATGGTGGATTTTATGGAGAGCAAGAAAATCAAGGATATTATGTCGGCGCTGATGCTATGGATTTTCAGTATCCTGTAAGTTTCTTGAGCTGGTTTATGGTTTTTTTGTCATGATAATTGTGTTATTATGGTTCAGTCTTTCTATGTAGTTGCCTTGTTGCATATCTGGTCAATTCAGTCTATGCATTTGATGCCTGTATAAATACTTGAATCTGATAATTTGCATTGCATTAGGCAAGTCTTTAGAATCATATTCCATTGTTTCATGTTGTTGTGAGAAACATGCATGTGTCTCAAAGAATCGTATTCTTTAAGCATATATCTTCAGAAAGGGTTGAATAGAAAATAAAACTGTAATGATGATGTATAATGTTTTTTAGCACATTTTGAATTCTGAAATAAATTTGGGATTGGCTAATTTTGGCTTGAAAATAACATGTTAATAAAAGGCTTCATTCATATTGCATTACACATGAAAATGGTTAATATTTTAAACTACTATTTACCCGACATCATCTCTGATGTCCTGTAACATTCAAGGAAAAAATGTGGCTAGTAAATATGATTTTATGAAATGATAAGAATTCATTATGCAGACATATACTTGATCTCTCATATGTTCTACAACATATATATGTAAATATCTAAATTTTTGTTGGTTTTATTTAGGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCATGCCAGGATATCAGACTGGCTACTCTTCATACTTTCCTGTGAACACACCTGGTGTCGATGTCCAGTATCAGGTTTACCCTCCTGGTTCCGTCTTTCAACAACCAATTGGATCCCCTGGCTATATTTCACCTTATGGTGAGTTACTTCCATCAACATACTCATGGGATTCATCTTTAACCACACAAGATGTAGCACAAGGGAATCGTTATAATGAATTGGCCAGTAAACCGAGTGGTAGATCGATCTTTTCTTCGCAGAGTCGTACTGGCAGTGGTATTGTGTCAAAGTCTGTGCCCTCATCTAATGTGAGCAACTCATCAGAAGTGAAGGGTTTGCCACCAATATTAGATGTTTCTTCAACACATGTTAAGCGCAACCAGCCAAAACAAGCAAACAAGGTAACCTTACTTCCTCCGTTCTGTTTTAACTATTGTTTTTGTTCCTGTTTATTTGTCGCTGTCTAAGTTCAATGCAATATTAACTATTGTTTTTTCGATATATGCTTACCTTATAATTTTAGAAAGAGAAATAAGTGGAACTATATATTGAACTGTTGGGGATTTCGTAGGAAAACAACAAATAATTTCATCAAAAGTTAAATTAGATTATTCTAAATAGTTTGTGGTGTTTTTCAGGCATCCATTTCTGGTCCTGTTCTCCATTCAGATGCAATGCCAAAGGGTTCTTTTCCCGTCGCAAAGTTTTCTACATACAATCAAGGAAAGAGTGGGTTCCCCTATCAAAACAACTTTCCTAATATGAAAGCAACAAGTACCAAGGGATGGGTTAGTACTGAGAAGCTGAAACTCAGAAACAAGGTTAATGATTCACTTAATGAGCAGAATCAAGGTCCTAGAACAGTTAATGCAAAAGGTACTTTAAACTCTGGAGGTAATTCTGGAGATAAGAGTGTCAATGGTGACACCAAAATCAGGACAGATCAACATAACCTTCCTGATTTTCCAACCAAATATGATCATGCACTTTTCTTCGTCATTAAATCGTACAGTGAAGATGATGTTCATAAGAGCATCAAGTACGATGTATGGGCGAGTACACCTAATGGCAATAAGAGGCTCGACAATGCATTTCAGGATGCACAGAATCGAATGGAAGAGAAAGGAAGCATGTGTCCCGTATTCCTTTTCTTTTCGGTATGCTATCAAGTTCAATCTCTGTTCTGTTAAGACCTACGGCCCGTTTGTGTTTTATTTGCTCATTTATTTATCTTAGAAAAATACGACTCACATCAGTGTTTTGATAATTGTTGAGTTCAGGTCAACGCTAGTGGTCAATTTTGTGGAGTAGCCGAGATGATTGGACGAGTGGATTTCAACAAAAGTATGGATTTCTGGCAGCAAGATAAATGGAACGGATATTTCCCTGTCAAATGGCACATTATAAAAGATATTCCAAATCCTCAGCTACGGCATATTATCCTCGAGAATAATGATCACAAGCCTGTAACAAATAGTAGAGACACTCAAGAGGTTTGCATTTTTTTAACATTCTATTAAAGCAACTGTTTACAGAAATGTCCTAGTTATTTCTTCTGTATCTTCACTATTGTGTTAATTGTGTTAATGTTTCGACTTTCCAGATTCATTTTCCGCAAGGTATTGAAATGCTCAACATTTTCAAAAACTATGTATCGAGAACATCGATATTGGATGATTTTGATTTTTACGAAACCCGTCAGAAGGTCATGCAAGAGAAGAAAATAAGACAACCTATGCCACATACCAATGTACAGGTTTGATTTTACACTTGTACCTTGTTCTTATTCCAAAGTTCTTACTTCTTACTAATGATAGCACTAGCACTAGCACATATTGATTCCAATGAATTCTTTTTTGACATTATTGATGGATGAGTGCATGTGATTGTGGGACCATTTTTGCATAATTGTGGTTGGAGGAATCCTTTCACAATATTTAATAAATGCCTAGTTGACAAACTATTCTAAACTTGATACCCTTTTTGGAATAATTTGGAGTTGGGAAATCTCAAAGTAATTAATAACTCTTTGGAGCATGTTCTTTTATTTATCTCTTTTGTATTTCCCAATTCTTTATTTTTCTACTATGGTTGATGTGTTCTTTTGGTGTCCAATAATTTATTTAGAAGTCTTAGACCCACCTTTTTAATTGTGTTACAATTATGTCCCTTCTTTACTTTTCATTTATATAAAACTCCCAAATTTTCATAATCTACTCATAATTTTCACACATTTAATCAGCTAAGTTTTTTTACACTTATTTTTACTCGAAACTCGGCAAAACAATTCAAGACTAATAGTTGTGCATAGTCCAAACTAGTCCAACCGAAAAAACCCTTTCATTTCTTTAGTTTTTGCTTTGATCTCTTTGCTTATATATAATTTTGGTTGCAGCATATAGAAGACTTAACAAGTGCACTTGGATCAGTAGACATATCAGCTGTAAAGAACATGGAGGATCCTAAGTTGGTTGTAAAGAACATGGAGGATCCTAAGTTGGTTGAGAAAGTGAATGACTGA
Protein sequence

>MS.gene071541.t1

MAAELKKAADEMNKKKLHGDSSTAEHNNSNMVSSKGGGSSPSDARSCVSSIGDASGSFKEGDVDHEFQSTDQNVAYSAGSYYGYYYPGYGGFYGEQENQGYYVGADAMDFQYPVMQADNGSYVYLMPGYQTGYSSYFPVNTPGVDVQYQVYPPGSVFQQPIGSPGYISPYGELLPSTYSWDSSLTTQDVAQGNRYNELASKPSGRSIFSSQSRTGSGIVSKSVPSSNVSNSSEVKGLPPILDVSSTHVKRNQPKQANKASISGPVLHSDAMPKGSFPVAKFSTYNQGKSGFPYQNNFPNMKATSTKGWVSTEKLKLRNKVNDSLNEQNQGPRTVNAKGTLNSGGNSGDKSVNGDTKIRTDQHNLPDFPTKYDHALFFVIKSYSEDDVHKSIKYDVWASTPNGNKRLDNAFQDAQNRMEEKGSMCPVFLFFSVNASGQFCGVAEMIGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDIPNPQLRHIILENNDHKPVTNSRDTQEIHFPQGIEMLNIFKNYVSRTSILDDFDFYETRQKVMQEKKIRQPMPHTNVQHIEDLTSALGSVDISAVKNMEDPKLVVKNMEDPKLVEKVND