Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002538.t1 | XP_003593709.1 | 98 | 701 | 10 | 1 | 1 | 697 | 1 | 701 | 0.00E+00 | 1311.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002538.t1 | F4JRJ6 | 75.3 | 691 | 166 | 3 | 4 | 692 | 3 | 690 | 1.4e-303 | 1043.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002538.t1 | G7IK78 | 98.0 | 701 | 10 | 1 | 1 | 697 | 1 | 701 | 0.0e+00 | 1311.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene002538 | MS.gene07327 | PPI |
MS.gene92776 | MS.gene002538 | PPI |
MS.gene002538 | MS.gene05323 | PPI |
MS.gene071065 | MS.gene002538 | PPI |
MS.gene87672 | MS.gene002538 | PPI |
MS.gene002538 | MS.gene08252 | PPI |
MS.gene036929 | MS.gene002538 | PPI |
MS.gene77305 | MS.gene002538 | PPI |
MS.gene40397 | MS.gene002538 | PPI |
MS.gene018109 | MS.gene002538 | PPI |
MS.gene002538 | MS.gene005495 | PPI |
MS.gene50492 | MS.gene002538 | PPI |
MS.gene002538 | MS.gene78458 | PPI |
MS.gene98782 | MS.gene002538 | PPI |
MS.gene27517 | MS.gene002538 | PPI |
MS.gene042341 | MS.gene002538 | PPI |
MS.gene048625 | MS.gene002538 | PPI |
MS.gene023392 | MS.gene002538 | PPI |
MS.gene59988 | MS.gene002538 | PPI |
MS.gene20876 | MS.gene002538 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002538.t1 | MTR_2g015320 | 98.003 | 701 | 10 | 1 | 1 | 697 | 1 | 701 | 0.0 | 1420 |
MS.gene002538.t1 | MTR_1g023985 | 48.012 | 654 | 317 | 5 | 41 | 694 | 562 | 1192 | 0.0 | 633 |
MS.gene002538.t1 | MTR_1g114490 | 48.346 | 635 | 305 | 5 | 62 | 696 | 514 | 1125 | 0.0 | 619 |
MS.gene002538.t1 | MTR_3g023880 | 45.522 | 670 | 330 | 9 | 29 | 691 | 392 | 1033 | 0.0 | 600 |
MS.gene002538.t1 | MTR_6g061840 | 46.012 | 652 | 326 | 7 | 41 | 688 | 246 | 875 | 0.0 | 598 |
MS.gene002538.t1 | MTR_1g086640 | 45.970 | 670 | 319 | 10 | 39 | 690 | 47 | 691 | 0.0 | 592 |
MS.gene002538.t1 | MTR_3g052610 | 43.185 | 697 | 328 | 10 | 38 | 690 | 43 | 715 | 0.0 | 568 |
MS.gene002538.t1 | MTR_5g075310 | 42.319 | 664 | 318 | 7 | 27 | 688 | 187 | 787 | 0.0 | 563 |
MS.gene002538.t1 | MTR_7g095080 | 41.076 | 706 | 338 | 8 | 42 | 691 | 41 | 724 | 0.0 | 554 |
MS.gene002538.t1 | MTR_4g485610 | 45.223 | 628 | 305 | 9 | 79 | 690 | 49 | 653 | 0.0 | 543 |
MS.gene002538.t1 | MTR_3g054400 | 40.758 | 660 | 362 | 7 | 41 | 694 | 360 | 996 | 1.44e-180 | 543 |
MS.gene002538.t1 | MTR_2g098440 | 40.909 | 660 | 361 | 7 | 41 | 694 | 563 | 1199 | 3.23e-178 | 542 |
MS.gene002538.t1 | MTR_6g061840 | 47.664 | 535 | 257 | 6 | 41 | 571 | 246 | 761 | 2.76e-170 | 507 |
MS.gene002538.t1 | MTR_8g080240 | 39.371 | 668 | 356 | 15 | 49 | 695 | 4 | 643 | 4.26e-154 | 461 |
MS.gene002538.t1 | MTR_8g080240 | 39.371 | 668 | 356 | 15 | 49 | 695 | 4 | 643 | 7.75e-154 | 462 |
MS.gene002538.t1 | MTR_8g080240 | 41.772 | 553 | 292 | 8 | 49 | 594 | 4 | 533 | 6.27e-144 | 433 |
MS.gene002538.t1 | MTR_4g094992 | 38.593 | 526 | 282 | 6 | 186 | 691 | 14 | 518 | 1.85e-128 | 390 |
MS.gene002538.t1 | MTR_8g041990 | 34.112 | 642 | 285 | 10 | 32 | 669 | 89 | 596 | 1.08e-123 | 382 |
MS.gene002538.t1 | MTR_6g061840 | 49.025 | 359 | 165 | 2 | 41 | 399 | 246 | 586 | 9.74e-116 | 360 |
MS.gene002538.t1 | MTR_3g014030 | 33.819 | 686 | 371 | 16 | 42 | 685 | 255 | 899 | 1.65e-98 | 333 |
MS.gene002538.t1 | MTR_1g109170 | 31.683 | 707 | 401 | 18 | 46 | 681 | 326 | 1021 | 2.29e-98 | 328 |
MS.gene002538.t1 | MTR_1g109170 | 31.683 | 707 | 401 | 18 | 46 | 681 | 326 | 1021 | 4.00e-98 | 328 |
MS.gene002538.t1 | MTR_3g086770 | 33.189 | 693 | 393 | 17 | 36 | 696 | 249 | 903 | 1.73e-96 | 327 |
MS.gene002538.t1 | MTR_1g056490 | 31.579 | 703 | 406 | 15 | 46 | 681 | 228 | 922 | 9.60e-92 | 307 |
MS.gene002538.t1 | MTR_0267s0070 | 33.739 | 658 | 355 | 16 | 68 | 685 | 938 | 1554 | 2.24e-91 | 312 |
MS.gene002538.t1 | MTR_8g106630 | 29.703 | 707 | 418 | 17 | 46 | 681 | 270 | 968 | 3.29e-90 | 305 |
MS.gene002538.t1 | MTR_1543s0010 | 41.319 | 288 | 165 | 2 | 300 | 587 | 5 | 288 | 2.34e-69 | 229 |
MS.gene002538.t1 | MTR_3g055020 | 38.645 | 251 | 148 | 3 | 346 | 594 | 25 | 271 | 1.35e-51 | 186 |
MS.gene002538.t1 | MTR_8g045110 | 29.929 | 421 | 261 | 12 | 270 | 671 | 109 | 514 | 9.83e-51 | 187 |
MS.gene002538.t1 | MTR_4g134790 | 29.106 | 481 | 271 | 11 | 267 | 681 | 896 | 1372 | 6.40e-49 | 186 |
MS.gene002538.t1 | MTR_4g134790 | 36.612 | 183 | 101 | 5 | 46 | 215 | 602 | 782 | 5.05e-25 | 112 |
MS.gene002538.t1 | MTR_4g134790 | 29.106 | 481 | 271 | 11 | 267 | 681 | 899 | 1375 | 6.90e-49 | 186 |
MS.gene002538.t1 | MTR_4g134790 | 36.612 | 183 | 101 | 5 | 46 | 215 | 602 | 782 | 4.93e-25 | 112 |
MS.gene002538.t1 | MTR_4g023590 | 36.396 | 283 | 136 | 6 | 37 | 290 | 260 | 527 | 9.46e-47 | 179 |
MS.gene002538.t1 | MTR_4g023590 | 41.414 | 198 | 114 | 2 | 303 | 499 | 684 | 880 | 5.75e-32 | 134 |
MS.gene002538.t1 | MTR_1g088590 | 30.617 | 454 | 270 | 13 | 48 | 471 | 29 | 467 | 1.81e-45 | 175 |
MS.gene002538.t1 | MTR_5g090430 | 30.993 | 413 | 252 | 13 | 277 | 665 | 554 | 957 | 6.60e-43 | 167 |
MS.gene002538.t1 | MTR_5g090430 | 37.363 | 182 | 101 | 4 | 46 | 215 | 184 | 364 | 1.16e-31 | 132 |
MS.gene002538.t1 | MTR_5g090430 | 30.676 | 414 | 252 | 13 | 277 | 665 | 441 | 844 | 7.21e-43 | 167 |
MS.gene002538.t1 | MTR_5g090430 | 37.363 | 182 | 101 | 4 | 46 | 215 | 71 | 251 | 1.33e-31 | 132 |
MS.gene002538.t1 | MTR_8g044260 | 27.570 | 428 | 288 | 10 | 270 | 681 | 522 | 943 | 7.24e-41 | 161 |
MS.gene002538.t1 | MTR_8g044260 | 41.040 | 173 | 98 | 3 | 46 | 215 | 246 | 417 | 1.88e-29 | 125 |
MS.gene002538.t1 | MTR_4g120070 | 41.624 | 197 | 113 | 2 | 303 | 498 | 610 | 805 | 3.35e-32 | 134 |
MS.gene002538.t1 | MTR_4g120070 | 29.630 | 297 | 124 | 9 | 50 | 290 | 186 | 453 | 1.46e-26 | 116 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002538.t1 | AT4G18465 | 76.845 | 691 | 155 | 3 | 4 | 692 | 3 | 690 | 0.0 | 1116 |
MS.gene002538.t1 | AT1G32490 | 46.605 | 648 | 321 | 7 | 46 | 691 | 401 | 1025 | 0.0 | 630 |
MS.gene002538.t1 | AT1G32490 | 46.605 | 648 | 321 | 7 | 46 | 691 | 391 | 1015 | 0.0 | 630 |
MS.gene002538.t1 | AT2G35340 | 45.710 | 676 | 341 | 8 | 18 | 691 | 236 | 887 | 0.0 | 624 |
MS.gene002538.t1 | AT2G35340 | 45.710 | 676 | 341 | 8 | 18 | 691 | 374 | 1025 | 0.0 | 624 |
MS.gene002538.t1 | AT3G26560 | 47.095 | 654 | 323 | 5 | 41 | 694 | 507 | 1137 | 0.0 | 623 |
MS.gene002538.t1 | AT3G62310 | 46.519 | 675 | 317 | 10 | 39 | 694 | 51 | 700 | 0.0 | 603 |
MS.gene002538.t1 | AT2G47250 | 46.074 | 675 | 320 | 11 | 39 | 694 | 55 | 704 | 0.0 | 597 |
MS.gene002538.t1 | AT4G16680 | 44.267 | 689 | 341 | 12 | 16 | 691 | 97 | 755 | 0.0 | 592 |
MS.gene002538.t1 | AT1G26370 | 41.679 | 703 | 333 | 8 | 42 | 689 | 34 | 714 | 0.0 | 546 |
MS.gene002538.t1 | AT5G13010 | 40.303 | 660 | 365 | 7 | 41 | 694 | 550 | 1186 | 9.65e-177 | 538 |
MS.gene002538.t1 | AT3G62310 | 48.780 | 492 | 221 | 5 | 39 | 518 | 51 | 523 | 1.62e-157 | 466 |
MS.gene002538.t1 | AT3G62310 | 48.676 | 491 | 221 | 5 | 39 | 517 | 51 | 522 | 8.28e-156 | 463 |
MS.gene002538.t1 | AT1G27900 | 38.358 | 670 | 365 | 15 | 49 | 695 | 4 | 648 | 1.75e-146 | 443 |
MS.gene002538.t1 | AT4G16680 | 46.723 | 473 | 218 | 7 | 16 | 480 | 177 | 623 | 1.42e-138 | 421 |
MS.gene002538.t1 | AT1G27900 | 39.892 | 554 | 304 | 9 | 49 | 593 | 4 | 537 | 5.15e-135 | 408 |
MS.gene002538.t1 | AT1G27900 | 39.892 | 554 | 304 | 9 | 49 | 593 | 4 | 537 | 6.34e-135 | 409 |
MS.gene002538.t1 | AT2G35920 | 32.575 | 703 | 399 | 15 | 46 | 681 | 167 | 861 | 7.10e-105 | 341 |
MS.gene002538.t1 | AT2G35920 | 32.575 | 703 | 399 | 15 | 46 | 681 | 257 | 951 | 4.55e-104 | 341 |
MS.gene002538.t1 | AT2G35920 | 32.575 | 703 | 399 | 15 | 46 | 681 | 225 | 919 | 4.76e-104 | 340 |
MS.gene002538.t1 | AT2G01130 | 30.181 | 719 | 419 | 18 | 37 | 681 | 138 | 847 | 8.58e-94 | 313 |
MS.gene002538.t1 | AT2G01130 | 30.181 | 719 | 419 | 18 | 37 | 681 | 203 | 912 | 2.65e-93 | 313 |
MS.gene002538.t1 | AT5G10370 | 32.448 | 715 | 416 | 19 | 8 | 687 | 261 | 943 | 8.65e-92 | 313 |
MS.gene002538.t1 | AT4G01020 | 32.985 | 670 | 386 | 18 | 49 | 687 | 303 | 940 | 5.17e-90 | 308 |
MS.gene002538.t1 | AT1G48650 | 31.356 | 708 | 403 | 19 | 46 | 681 | 296 | 992 | 4.20e-87 | 297 |
MS.gene002538.t1 | AT1G48650 | 31.356 | 708 | 403 | 19 | 46 | 681 | 296 | 992 | 5.06e-87 | 297 |
MS.gene002538.t1 | AT5G04895 | 29.787 | 705 | 419 | 19 | 46 | 681 | 257 | 954 | 9.27e-78 | 270 |
MS.gene002538.t1 | AT5G14900 | 43.066 | 274 | 140 | 7 | 426 | 690 | 2 | 268 | 3.32e-67 | 223 |
MS.gene002538.t1 | AT1G58060 | 30.081 | 492 | 273 | 13 | 257 | 681 | 894 | 1381 | 5.36e-51 | 192 |
MS.gene002538.t1 | AT1G58060 | 38.220 | 191 | 102 | 6 | 39 | 215 | 604 | 792 | 3.34e-27 | 119 |
MS.gene002538.t1 | AT1G58050 | 34.561 | 353 | 203 | 9 | 268 | 596 | 872 | 1220 | 3.77e-48 | 184 |
MS.gene002538.t1 | AT1G58050 | 35.417 | 192 | 103 | 7 | 39 | 215 | 587 | 772 | 1.41e-23 | 107 |
MS.gene002538.t1 | AT1G33390 | 36.755 | 302 | 141 | 8 | 40 | 312 | 232 | 512 | 1.35e-45 | 176 |
MS.gene002538.t1 | AT1G33390 | 27.887 | 459 | 261 | 8 | 301 | 693 | 637 | 1091 | 3.76e-40 | 159 |
MS.gene002538.t1 | AT1G33390 | 36.755 | 302 | 141 | 8 | 40 | 312 | 232 | 512 | 1.35e-45 | 176 |
MS.gene002538.t1 | AT1G33390 | 27.887 | 459 | 261 | 8 | 301 | 693 | 637 | 1091 | 3.76e-40 | 159 |
MS.gene002538.t1 | AT2G47680 | 30.266 | 489 | 291 | 16 | 49 | 504 | 26 | 497 | 4.76e-40 | 159 |
MS.gene002538.t1 | AT1G06670 | 30.108 | 372 | 229 | 10 | 277 | 626 | 576 | 938 | 5.08e-40 | 159 |
MS.gene002538.t1 | AT1G06670 | 37.363 | 182 | 108 | 3 | 39 | 215 | 207 | 387 | 3.79e-32 | 134 |
MS.gene002538.t1 | AT1G06670 | 30.108 | 372 | 229 | 10 | 277 | 626 | 576 | 938 | 5.98e-40 | 159 |
MS.gene002538.t1 | AT1G06670 | 37.363 | 182 | 108 | 3 | 39 | 215 | 207 | 387 | 4.10e-32 | 134 |
MS.gene002538.t1 | AT2G30800 | 28.689 | 366 | 238 | 9 | 277 | 624 | 209 | 569 | 5.99e-39 | 155 |
MS.gene002538.t1 | AT2G30800 | 28.689 | 366 | 238 | 9 | 277 | 624 | 552 | 912 | 1.28e-38 | 154 |
MS.gene002538.t1 | AT2G30800 | 37.430 | 179 | 106 | 3 | 42 | 215 | 180 | 357 | 7.21e-33 | 136 |
Find 168 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTATGCATACAGTCTATT+TGG | 0.136281 | 2.1:-70070412 | MS.gene002538:intron |
CTGTTCAGGCTGTTTCTTCT+AGG | 0.204165 | 2.1:-70078895 | MS.gene002538:CDS |
GATGTTCTTGTATTCCTTAC+TGG | 0.232908 | 2.1:-70074335 | MS.gene002538:CDS |
TCTTCTTCTTCCTCCGGATA+TGG | 0.237160 | 2.1:-70079200 | MS.gene002538:CDS |
AGTTGAGAATGGCGCAATTC+TGG | 0.261132 | 2.1:-70079298 | None:intergenic |
TGGTTGTGGCTCCAATTTCT+AGG | 0.265548 | 2.1:-70073087 | MS.gene002538:CDS |
GCTTCGGGTTTCTCTGTTCC+TGG | 0.271519 | 2.1:+70079272 | None:intergenic |
TTTGGGGATCGATAATATAT+TGG | 0.272408 | 2.1:-70071607 | MS.gene002538:CDS |
CTTGCTTGGACTATTGAAAA+AGG | 0.289636 | 2.1:-70077921 | MS.gene002538:intron |
TCTCTACTCCCTTGGGATCT+TGG | 0.291941 | 2.1:-70071529 | MS.gene002538:CDS |
ATCAAGTTGGTTATACTATT+AGG | 0.292995 | 2.1:-70078841 | MS.gene002538:CDS |
GATTTCCAGTTAAAGGCTTT+GGG | 0.306358 | 2.1:-70071624 | MS.gene002538:intron |
CTAGCAGAAGCCCTAGAAAT+TGG | 0.312284 | 2.1:+70073076 | None:intergenic |
TGATTTCCAGTTAAAGGCTT+TGG | 0.330501 | 2.1:-70071625 | MS.gene002538:intron |
GATCTCTGATATTGAAAATC+TGG | 0.337569 | 2.1:-70073107 | MS.gene002538:CDS |
ACTATCATTGTCGGCGAAAC+CGG | 0.359000 | 2.1:-70079089 | MS.gene002538:CDS |
TCGTCAACTACCTGTGCTTC+GGG | 0.361670 | 2.1:+70079257 | None:intergenic |
TTGGGGATCGATAATATATT+GGG | 0.361787 | 2.1:-70071606 | MS.gene002538:CDS |
GTCGTCAACTACCTGTGCTT+CGG | 0.365035 | 2.1:+70079256 | None:intergenic |
ACCAAGACGACTCGCTGTTC+AGG | 0.375838 | 2.1:-70078909 | MS.gene002538:CDS |
CCGCAACGCCATTCTCTACT+TGG | 0.380130 | 2.1:-70079129 | MS.gene002538:CDS |
ACCCTTCATCGGTGCTATTC+AGG | 0.380359 | 2.1:-70069391 | MS.gene002538:intron |
AATAGATCCCTCATGGCTAT+TGG | 0.386520 | 2.1:-70069048 | MS.gene002538:CDS |
TGGAAGTTCTCTACTCCCTT+GGG | 0.390548 | 2.1:-70071536 | MS.gene002538:CDS |
TTGGAAGTTCTCTACTCCCT+TGG | 0.391288 | 2.1:-70071537 | MS.gene002538:CDS |
GTGTTGTTACAGTGTTATAA+TGG | 0.393810 | 2.1:-70077981 | MS.gene002538:intron |
ACCTCGACTGATAAGATTGC+AGG | 0.395827 | 2.1:+70075511 | None:intergenic |
ATTGAGGCTGGTTGGGCTGC+CGG | 0.396172 | 2.1:-70078956 | MS.gene002538:CDS |
ACTAATCGAAAGCACTCTTC+AGG | 0.396484 | 2.1:-70074263 | MS.gene002538:intron |
TTCCTCTTTCCTCTAGGAGT+TGG | 0.396820 | 2.1:+70073874 | None:intergenic |
AAGCAAGATGTCAGTTGAAA+TGG | 0.399094 | 2.1:+70077937 | None:intergenic |
ATACAGTCTATTTGGATCTC+AGG | 0.400650 | 2.1:-70070404 | MS.gene002538:intron |
TTCGACCAGGAAAATGTTAC+AGG | 0.403679 | 2.1:-70073027 | MS.gene002538:intron |
TGAAGCAATGATCCGAGCTT+TGG | 0.413230 | 2.1:-70071556 | MS.gene002538:CDS |
GTATCTGATTGAGGCTGGTT+GGG | 0.414430 | 2.1:-70078963 | MS.gene002538:CDS |
ATTTCAACTGACATCTTGCT+TGG | 0.417097 | 2.1:-70077935 | MS.gene002538:CDS |
CAAGTGGAATTTCTGCAACT+TGG | 0.419675 | 2.1:+70071472 | None:intergenic |
GTTAAGAAAGCAGTTATTGC+TGG | 0.420014 | 2.1:-70069629 | MS.gene002538:CDS |
CACGTTTCTTAATGTATACA+AGG | 0.420532 | 2.1:-70070085 | MS.gene002538:CDS |
TTGGCGTTGTTTATCGATGC+TGG | 0.431047 | 2.1:+70079172 | None:intergenic |
ATAATATATTGGGCTTTGAC+TGG | 0.435408 | 2.1:-70071596 | MS.gene002538:CDS |
AGATTTGATCTCTGTATCTC+TGG | 0.439451 | 2.1:+70072220 | None:intergenic |
TCATATCAATGAAGAAGATT+AGG | 0.443820 | 2.1:+70068993 | None:intergenic |
TCTGCTTCTTCTTCTTCCTC+CGG | 0.445350 | 2.1:-70079206 | MS.gene002538:CDS |
GCCAAGCTTACTTCACCAAC+TGG | 0.448080 | 2.1:-70071498 | MS.gene002538:CDS |
GCCTGAACAGCGAGTCGTCT+TGG | 0.453470 | 2.1:+70078908 | None:intergenic |
AACAGAGAAACCCGAAGCAC+AGG | 0.453867 | 2.1:-70079267 | MS.gene002538:CDS |
CGGATCATTGCTTCAGGTGA+TGG | 0.454095 | 2.1:+70071564 | None:intergenic |
TACATCCCATCAGGACTGTA+TGG | 0.461427 | 2.1:+70069449 | None:intergenic |
CTCTGAACATCCAAGTTGGC+TGG | 0.462620 | 2.1:+70070632 | None:intergenic |
GGTTGTGGCTCCAATTTCTA+GGG | 0.463394 | 2.1:-70073086 | MS.gene002538:CDS |
TGTTCAGGCTGTTTCTTCTA+GGG | 0.465073 | 2.1:-70078894 | MS.gene002538:CDS |
TTCTAGGGTTGCTCAAGAGA+TGG | 0.466640 | 2.1:-70078879 | MS.gene002538:CDS |
GAGGCTGGTTGGGCTGCCGG+TGG | 0.467499 | 2.1:-70078953 | MS.gene002538:CDS |
GAATTGAAAATAACCCACTT+TGG | 0.468850 | 2.1:+70069113 | None:intergenic |
AGACAAAGAGCTGGTAGGGC+TGG | 0.476988 | 2.1:-70073055 | MS.gene002538:CDS |
GTTAAACTTGGTGATCAAGT+TGG | 0.477413 | 2.1:-70078854 | MS.gene002538:CDS |
AGTATCTGATTGAGGCTGGT+TGG | 0.479870 | 2.1:-70078964 | MS.gene002538:CDS |
GGGATGTACAAGACGTTAAG+AGG | 0.481768 | 2.1:-70069434 | MS.gene002538:CDS |
AAAGCTCGGATCATTGCTTC+AGG | 0.483536 | 2.1:+70071558 | None:intergenic |
TCTTAACCACATGTCTAATG+AGG | 0.484691 | 2.1:-70072248 | MS.gene002538:CDS |
CTCCAACTCCTAGAGGAAAG+AGG | 0.486444 | 2.1:-70073876 | MS.gene002538:CDS |
TCTTGTCTCCTGTGTAATCC+AGG | 0.491145 | 2.1:-70072200 | MS.gene002538:intron |
CACATTGCAGTATCTGATTG+AGG | 0.491460 | 2.1:-70078972 | MS.gene002538:intron |
ACTACTTTCCTCTTTCCTCT+AGG | 0.492137 | 2.1:+70073868 | None:intergenic |
CAAGAGATGGGAGTTAAACT+TGG | 0.492826 | 2.1:-70078866 | MS.gene002538:CDS |
TACTATTGAAGCAAAATCAA+TGG | 0.493274 | 2.1:-70077748 | MS.gene002538:CDS |
TCTAGGGTTGCTCAAGAGAT+GGG | 0.493990 | 2.1:-70078878 | MS.gene002538:CDS |
GGTTTCGCCGACAATGATAG+TGG | 0.498964 | 2.1:+70079091 | None:intergenic |
TGGCTGATTTCTTCCGCCCA+AGG | 0.500876 | 2.1:-70077728 | MS.gene002538:intron |
CTCTCTTAATAGGAAACCAC+TGG | 0.504086 | 2.1:-70074359 | MS.gene002538:intron |
TTACCGATGGGGTGCTCCTG+AGG | 0.504557 | 2.1:-70078143 | MS.gene002538:CDS |
TGCTAGACAAAGAGCTGGTA+GGG | 0.508207 | 2.1:-70073059 | MS.gene002538:CDS |
TCCAGTTGGTGAAGTAAGCT+TGG | 0.508830 | 2.1:+70071497 | None:intergenic |
CATTCCACCACTATCATTGT+CGG | 0.508919 | 2.1:-70079098 | MS.gene002538:CDS |
GCAATAATCAAACGCAACTC+TGG | 0.510658 | 2.1:+70077777 | None:intergenic |
AGGCTGGTTGGGCTGCCGGT+GGG | 0.510882 | 2.1:-70078952 | MS.gene002538:CDS |
ATAATAGCGTCCAGCCAACT+TGG | 0.512838 | 2.1:-70070642 | MS.gene002538:CDS |
CGATATCATCTTGACCAGTA+AGG | 0.513614 | 2.1:+70074321 | None:intergenic |
AGGGCTCCCACGTGCTGACC+AGG | 0.515295 | 2.1:-70074015 | MS.gene002538:intron |
ATCTTGCGAAAGTGATATGC+AGG | 0.516796 | 2.1:-70069829 | MS.gene002538:intron |
GCGTTGCGGTATTTGTAGAC+AGG | 0.517253 | 2.1:+70079143 | None:intergenic |
ATGGCGCAATTCTGGAAGCC+AGG | 0.517729 | 2.1:-70079290 | MS.gene002538:CDS |
AACGTCTTGTACATCCCATC+AGG | 0.518567 | 2.1:+70069440 | None:intergenic |
CTGCTAGACAAAGAGCTGGT+AGG | 0.518625 | 2.1:-70073060 | MS.gene002538:CDS |
TAAAAGCCATACAGTCCTGA+TGG | 0.520580 | 2.1:-70069455 | MS.gene002538:intron |
TACCTGAATAGCACCGATGA+AGG | 0.520912 | 2.1:+70069389 | None:intergenic |
CAGCAGCCTGAACATAGTCT+TGG | 0.521541 | 2.1:+70075042 | None:intergenic |
GATGCTGGCGTAGCCATATC+CGG | 0.522367 | 2.1:+70079187 | None:intergenic |
GCCTGAACATAGTCTTGGAC+AGG | 0.522736 | 2.1:+70075047 | None:intergenic |
GAAGGCAAATTACCCGCTCA+TGG | 0.523634 | 2.1:+70075000 | None:intergenic |
CTTAACCACATGTCTAATGA+GGG | 0.524180 | 2.1:-70072247 | MS.gene002538:CDS |
ACCTGTCCAAGACTATGTTC+AGG | 0.533597 | 2.1:-70075048 | MS.gene002538:CDS |
ATTGTCTATGTTGTTGACAG+TGG | 0.536673 | 2.1:-70073718 | MS.gene002538:CDS |
GCTTCAGGTGATGGAGATGC+TGG | 0.539926 | 2.1:+70071573 | None:intergenic |
TACAGTCTATTTGGATCTCA+GGG | 0.545479 | 2.1:-70070403 | MS.gene002538:intron |
AGATCCCTCATGGCTATTGG+AGG | 0.547377 | 2.1:-70069045 | MS.gene002538:CDS |
AGAAGAATTGCACAGAGGAT+AGG | 0.551527 | 2.1:-70069864 | MS.gene002538:CDS |
TACCGATGGGGTGCTCCTGA+GGG | 0.552778 | 2.1:-70078142 | MS.gene002538:CDS |
AAAACAGCGGTTCTACAATC+CGG | 0.553766 | 2.1:-70073689 | MS.gene002538:intron |
CAGGTAGTTGACGACGAAGA+AGG | 0.554742 | 2.1:-70079248 | MS.gene002538:CDS |
TGATATTGAAAATCTGGTTG+TGG | 0.556104 | 2.1:-70073101 | MS.gene002538:CDS |
CTCCCTCAGGAGCACCCCAT+CGG | 0.563660 | 2.1:+70078140 | None:intergenic |
TTGCAGTATCTGATTGAGGC+TGG | 0.564411 | 2.1:-70078968 | MS.gene002538:intron |
TTGTTACAGTGTTATAATGG+TGG | 0.565300 | 2.1:-70077978 | MS.gene002538:intron |
GCGGCGAGAACCTGAAAATG+AGG | 0.570614 | 2.1:-70075554 | MS.gene002538:CDS |
GAACCTGAAAATGAGGCGAA+TGG | 0.571890 | 2.1:-70075547 | MS.gene002538:CDS |
AGTTTCAACCAAGTAGAGAA+TGG | 0.573146 | 2.1:+70079121 | None:intergenic |
ATTGAGATTTGCTGCTGCCG+AGG | 0.574585 | 2.1:-70070348 | MS.gene002538:intron |
ATTCTCTAGTATCAACTGAT+CGG | 0.574959 | 2.1:-70069094 | MS.gene002538:CDS |
TTGCAGAGTAAATCCAAAGT+GGG | 0.575538 | 2.1:-70069126 | MS.gene002538:intron |
ATTTGTAGACAGGTAATCGT+TGG | 0.576280 | 2.1:+70079153 | None:intergenic |
TCTGCAACTTGGAATCCAGT+TGG | 0.576711 | 2.1:+70071483 | None:intergenic |
GATCATTCATCATCTCCCTC+AGG | 0.579868 | 2.1:+70078127 | None:intergenic |
TGCTAATGCATGTCGTCTTG+AGG | 0.581633 | 2.1:-70069600 | MS.gene002538:intron |
AAAAGCCATACAGTCCTGAT+GGG | 0.581663 | 2.1:-70069454 | MS.gene002538:intron |
CAAAACCACTCAAATCCCTC+AGG | 0.581786 | 2.1:-70079060 | MS.gene002538:intron |
AGAAACATCACTCACGTTGG+AGG | 0.584237 | 2.1:-70073827 | MS.gene002538:intron |
AGTATATATTCACCCTTCAT+CGG | 0.585718 | 2.1:-70069402 | MS.gene002538:CDS |
ATTGTCGGCGAAACCGGTAG+CGG | 0.585830 | 2.1:-70079083 | MS.gene002538:CDS |
CTCAGGGAGAGGGATACAAA+AGG | 0.587938 | 2.1:-70070387 | MS.gene002538:CDS |
AGTAGAGAACTTCCAAAGCT+CGG | 0.587949 | 2.1:+70071544 | None:intergenic |
ATTTCCAGTTAAAGGCTTTG+GGG | 0.589591 | 2.1:-70071623 | MS.gene002538:intron |
TTTAAAATTTGTTACCGATG+GGG | 0.589931 | 2.1:-70078154 | MS.gene002538:CDS |
TTTCTAACCTGGTCAGCACG+TGG | 0.590505 | 2.1:+70074008 | None:intergenic |
TCTCCTCTGAACATCCAAGT+TGG | 0.594100 | 2.1:+70070628 | None:intergenic |
TCTATTTGGATCTCAGGGAG+AGG | 0.595728 | 2.1:-70070398 | MS.gene002538:CDS |
CTATTTGGATCTCAGGGAGA+GGG | 0.595788 | 2.1:-70070397 | MS.gene002538:CDS |
TGATGACAATAGATCCCTCA+TGG | 0.595949 | 2.1:-70069055 | MS.gene002538:CDS |
CATCATCATCCAAGATCCCA+AGG | 0.596814 | 2.1:+70071520 | None:intergenic |
AGTACTCTTGATCCATGAGC+GGG | 0.596911 | 2.1:-70075012 | MS.gene002538:intron |
GAATTCCCTCATTAGACATG+TGG | 0.597790 | 2.1:+70072242 | None:intergenic |
GCTTCTGCTAGACAAAGAGC+TGG | 0.603108 | 2.1:-70073064 | MS.gene002538:CDS |
AGGGCTGGACGAGTTCGACC+AGG | 0.603545 | 2.1:-70073040 | MS.gene002538:CDS |
AGGAAGAAGAAGAAGCAGAA+GGG | 0.604379 | 2.1:+70079210 | None:intergenic |
TTTGCAGAGTAAATCCAAAG+TGG | 0.604482 | 2.1:-70069127 | MS.gene002538:intron |
TGGTGGATGAAGCTCATGAA+AGG | 0.604552 | 2.1:-70077961 | MS.gene002538:CDS |
TGCTGTAGCTTGTAGAAGTG+AGG | 0.605035 | 2.1:+70069017 | None:intergenic |
AACTCATACACACCATGGCA+TGG | 0.607780 | 2.1:+70070007 | None:intergenic |
GAGGAAGAAGAAGAAGCAGA+AGG | 0.615329 | 2.1:+70079209 | None:intergenic |
ACGTTTCTTAATGTATACAA+GGG | 0.616343 | 2.1:-70070084 | MS.gene002538:CDS |
ACAAGCAATGAGTCGCCCAC+CGG | 0.618598 | 2.1:+70078937 | None:intergenic |
TTCGTTGAATAAATGAACAG+CGG | 0.620861 | 2.1:+70074295 | None:intergenic |
GCAGCCTCCAATAGCCATGA+GGG | 0.626820 | 2.1:+70069041 | None:intergenic |
TTCTAACCTGGTCAGCACGT+GGG | 0.627262 | 2.1:+70074009 | None:intergenic |
CAGCCAACTTGGATGTTCAG+AGG | 0.629001 | 2.1:-70070631 | MS.gene002538:CDS |
ATTGTGATGATTTACGAGAC+TGG | 0.632482 | 2.1:+70070055 | None:intergenic |
CCAAGTAGAGAATGGCGTTG+CGG | 0.633612 | 2.1:+70079129 | None:intergenic |
ACCTGAATAGCACCGATGAA+GGG | 0.634582 | 2.1:+70069390 | None:intergenic |
ACCTGCAATCTTATCAGTCG+AGG | 0.638844 | 2.1:-70075512 | MS.gene002538:intron |
TTCGCCGACAATGATAGTGG+TGG | 0.649702 | 2.1:+70079094 | None:intergenic |
AGCAGAAACATCACTCACGT+TGG | 0.650532 | 2.1:-70073830 | MS.gene002538:CDS |
GATTGGACGAAAACCTTGGG+CGG | 0.657330 | 2.1:+70077715 | None:intergenic |
CGTGGGAGCCCTGAATAGAG+AGG | 0.658763 | 2.1:+70074026 | None:intergenic |
GGAGATAATTACAATTGCTG+CGG | 0.667691 | 2.1:-70070610 | MS.gene002538:CDS |
ATTACAGACCTGGATTACAC+AGG | 0.669752 | 2.1:+70072192 | None:intergenic |
TAGAACCTGAGGGATTTGAG+TGG | 0.673826 | 2.1:+70079055 | None:intergenic |
CAGTACTCTTGATCCATGAG+CGG | 0.675015 | 2.1:-70075013 | MS.gene002538:CDS |
AGCAGCCTCCAATAGCCATG+AGG | 0.682887 | 2.1:+70069040 | None:intergenic |
GAATACAAGAACATCTCCAG+TGG | 0.693869 | 2.1:+70074343 | None:intergenic |
ATCATCATCCAAGATCCCAA+GGG | 0.696835 | 2.1:+70071521 | None:intergenic |
CTTTGTGAACTACCATGCCA+TGG | 0.708432 | 2.1:-70070019 | MS.gene002538:intron |
ACAGTGGATTCTCAAAACAG+CGG | 0.719661 | 2.1:-70073702 | MS.gene002538:CDS |
ATACATTAAGAAACGTGACA+TGG | 0.721612 | 2.1:+70070091 | None:intergenic |
GCTGGCGTAGCCATATCCGG+AGG | 0.727235 | 2.1:+70079190 | None:intergenic |
GTAGTTGACGACGAAGAAGG+CGG | 0.730388 | 2.1:-70079245 | MS.gene002538:CDS |
AGTCTCGTAAATCATCACAA+TGG | 0.739888 | 2.1:-70070053 | MS.gene002538:CDS |
AACTCAGAAGAATTGCACAG+AGG | 0.778214 | 2.1:-70069869 | MS.gene002538:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 70068998 | 70079312 | 70068998 | ID=MS.gene002538 |
chr2.1 | mRNA | 70068998 | 70079312 | 70068998 | ID=MS.gene002538.t1;Parent=MS.gene002538 |
chr2.1 | exon | 70079061 | 70079312 | 70079061 | ID=MS.gene002538.t1.exon1;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70079061 | 70079312 | 70079061 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70078820 | 70078984 | 70078820 | ID=MS.gene002538.t1.exon2;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70078820 | 70078984 | 70078820 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70078108 | 70078187 | 70078108 | ID=MS.gene002538.t1.exon3;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70078108 | 70078187 | 70078108 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70077922 | 70077991 | 70077922 | ID=MS.gene002538.t1.exon4;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70077922 | 70077991 | 70077922 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70077729 | 70077814 | 70077729 | ID=MS.gene002538.t1.exon5;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70077729 | 70077814 | 70077729 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70075513 | 70075582 | 70075513 | ID=MS.gene002538.t1.exon6;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70075513 | 70075582 | 70075513 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70075013 | 70075108 | 70075013 | ID=MS.gene002538.t1.exon7;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70075013 | 70075108 | 70075013 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70074264 | 70074369 | 70074264 | ID=MS.gene002538.t1.exon8;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70074264 | 70074369 | 70074264 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70074016 | 70074062 | 70074016 | ID=MS.gene002538.t1.exon9;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70074016 | 70074062 | 70074016 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70073828 | 70073911 | 70073828 | ID=MS.gene002538.t1.exon10;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70073828 | 70073911 | 70073828 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70073690 | 70073743 | 70073690 | ID=MS.gene002538.t1.exon11;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70073690 | 70073743 | 70073690 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70073028 | 70073128 | 70073028 | ID=MS.gene002538.t1.exon12;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70073028 | 70073128 | 70073028 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70072201 | 70072291 | 70072201 | ID=MS.gene002538.t1.exon13;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70072201 | 70072291 | 70072201 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70071473 | 70071637 | 70071473 | ID=MS.gene002538.t1.exon14;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70071473 | 70071637 | 70071473 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70070596 | 70070685 | 70070596 | ID=MS.gene002538.t1.exon15;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70070596 | 70070685 | 70070596 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70070349 | 70070420 | 70070349 | ID=MS.gene002538.t1.exon16;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70070349 | 70070420 | 70070349 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70070020 | 70070118 | 70070020 | ID=MS.gene002538.t1.exon17;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70070020 | 70070118 | 70070020 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70069830 | 70069916 | 70069830 | ID=MS.gene002538.t1.exon18;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70069830 | 70069916 | 70069830 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70069601 | 70069654 | 70069601 | ID=MS.gene002538.t1.exon19;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70069601 | 70069654 | 70069601 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70069392 | 70069471 | 70069392 | ID=MS.gene002538.t1.exon20;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70069392 | 70069471 | 70069392 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
chr2.1 | exon | 70068998 | 70069142 | 70068998 | ID=MS.gene002538.t1.exon21;Parent=MS.gene002538.t1 |
chr2.1 | CDS | 70068998 | 70069142 | 70068998 | ID=cds.MS.gene002538.t1;Parent=MS.gene002538.t1 |
Gene Sequence |
Protein sequence |