Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59988.t1 | XP_003591371.1 | 93 | 712 | 49 | 1 | 1 | 712 | 1 | 711 | 0.00E+00 | 1338.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59988.t1 | Q9LZQ9 | 88.1 | 716 | 80 | 3 | 1 | 712 | 1 | 715 | 0.0e+00 | 1285.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59988.t1 | G7ICV1 | 93.0 | 712 | 49 | 1 | 1 | 712 | 1 | 711 | 0.0e+00 | 1338.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05323 | MS.gene59988 | 0.901572 | 2.34E-78 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59988.t1 | MTR_1g086640 | 92.978 | 712 | 49 | 1 | 1 | 712 | 1 | 711 | 0.0 | 1388 |
MS.gene59988.t1 | MTR_3g052610 | 84.145 | 719 | 83 | 4 | 1 | 692 | 1 | 715 | 0.0 | 1238 |
MS.gene59988.t1 | MTR_4g485610 | 82.584 | 712 | 85 | 1 | 1 | 712 | 1 | 673 | 0.0 | 1196 |
MS.gene59988.t1 | MTR_1g023985 | 53.752 | 653 | 283 | 5 | 51 | 702 | 563 | 1197 | 0.0 | 732 |
MS.gene59988.t1 | MTR_1g114490 | 53.096 | 646 | 279 | 6 | 58 | 702 | 506 | 1128 | 0.0 | 714 |
MS.gene59988.t1 | MTR_3g023880 | 53.670 | 654 | 283 | 8 | 53 | 703 | 407 | 1043 | 0.0 | 706 |
MS.gene59988.t1 | MTR_6g061840 | 51.672 | 658 | 297 | 8 | 51 | 703 | 247 | 888 | 0.0 | 677 |
MS.gene59988.t1 | MTR_5g075310 | 49.329 | 671 | 280 | 9 | 36 | 703 | 187 | 800 | 0.0 | 638 |
MS.gene59988.t1 | MTR_2g098440 | 45.146 | 649 | 332 | 8 | 51 | 692 | 564 | 1195 | 0.0 | 603 |
MS.gene59988.t1 | MTR_3g054400 | 44.615 | 650 | 336 | 8 | 51 | 693 | 361 | 993 | 0.0 | 600 |
MS.gene59988.t1 | MTR_2g015320 | 46.477 | 667 | 314 | 9 | 51 | 692 | 46 | 694 | 0.0 | 598 |
MS.gene59988.t1 | MTR_6g061840 | 55.492 | 528 | 219 | 5 | 51 | 574 | 247 | 762 | 0.0 | 592 |
MS.gene59988.t1 | MTR_7g095080 | 41.913 | 711 | 332 | 12 | 45 | 694 | 35 | 725 | 0.0 | 549 |
MS.gene59988.t1 | MTR_8g080240 | 41.782 | 651 | 338 | 12 | 57 | 685 | 3 | 634 | 2.79e-172 | 509 |
MS.gene59988.t1 | MTR_8g080240 | 41.782 | 651 | 338 | 12 | 57 | 685 | 3 | 634 | 4.62e-172 | 510 |
MS.gene59988.t1 | MTR_8g080240 | 43.170 | 593 | 301 | 11 | 57 | 634 | 3 | 574 | 1.36e-162 | 482 |
MS.gene59988.t1 | MTR_8g041990 | 42.190 | 621 | 226 | 12 | 53 | 668 | 101 | 593 | 4.13e-150 | 452 |
MS.gene59988.t1 | MTR_6g061840 | 58.239 | 352 | 135 | 2 | 51 | 402 | 247 | 586 | 5.39e-138 | 419 |
MS.gene59988.t1 | MTR_4g094992 | 40.115 | 521 | 272 | 11 | 199 | 694 | 14 | 519 | 4.15e-123 | 378 |
MS.gene59988.t1 | MTR_8g106630 | 32.196 | 733 | 388 | 20 | 39 | 683 | 257 | 968 | 1.64e-99 | 332 |
MS.gene59988.t1 | MTR_3g014030 | 31.118 | 662 | 396 | 14 | 58 | 687 | 266 | 899 | 1.25e-91 | 314 |
MS.gene59988.t1 | MTR_3g086770 | 31.865 | 681 | 400 | 18 | 41 | 687 | 249 | 899 | 1.41e-88 | 305 |
MS.gene59988.t1 | MTR_0267s0070 | 31.376 | 647 | 376 | 16 | 78 | 687 | 939 | 1554 | 1.57e-86 | 299 |
MS.gene59988.t1 | MTR_1543s0010 | 48.375 | 277 | 136 | 2 | 296 | 572 | 5 | 274 | 3.44e-82 | 264 |
MS.gene59988.t1 | MTR_3g055020 | 42.400 | 250 | 142 | 1 | 371 | 620 | 49 | 296 | 4.58e-63 | 218 |
MS.gene59988.t1 | MTR_4g023590 | 42.279 | 272 | 130 | 4 | 50 | 294 | 264 | 535 | 4.54e-59 | 218 |
MS.gene59988.t1 | MTR_4g023590 | 27.500 | 480 | 250 | 10 | 298 | 686 | 684 | 1156 | 4.50e-38 | 153 |
MS.gene59988.t1 | MTR_1g109170 | 33.333 | 423 | 249 | 11 | 273 | 677 | 608 | 1015 | 1.28e-56 | 210 |
MS.gene59988.t1 | MTR_1g109170 | 45.070 | 213 | 112 | 3 | 38 | 250 | 312 | 519 | 2.45e-47 | 182 |
MS.gene59988.t1 | MTR_1g109170 | 33.333 | 423 | 249 | 11 | 273 | 677 | 608 | 1015 | 1.34e-56 | 210 |
MS.gene59988.t1 | MTR_1g109170 | 45.070 | 213 | 112 | 3 | 38 | 250 | 312 | 519 | 2.76e-47 | 181 |
MS.gene59988.t1 | MTR_1g056490 | 36.235 | 425 | 243 | 13 | 270 | 677 | 503 | 916 | 1.32e-54 | 203 |
MS.gene59988.t1 | MTR_1g056490 | 43.939 | 198 | 105 | 2 | 55 | 250 | 228 | 421 | 2.39e-42 | 166 |
MS.gene59988.t1 | MTR_8g044260 | 32.791 | 430 | 261 | 10 | 270 | 683 | 526 | 943 | 1.45e-52 | 197 |
MS.gene59988.t1 | MTR_8g044260 | 42.991 | 214 | 115 | 3 | 38 | 250 | 232 | 439 | 5.79e-41 | 162 |
MS.gene59988.t1 | MTR_8g045110 | 32.220 | 419 | 260 | 13 | 270 | 677 | 113 | 518 | 1.18e-51 | 190 |
MS.gene59988.t1 | MTR_1g088590 | 31.681 | 464 | 244 | 16 | 58 | 474 | 30 | 467 | 2.44e-46 | 178 |
MS.gene59988.t1 | MTR_4g134790 | 30.802 | 474 | 246 | 15 | 273 | 677 | 909 | 1369 | 6.28e-45 | 174 |
MS.gene59988.t1 | MTR_4g134790 | 38.605 | 215 | 121 | 3 | 45 | 250 | 592 | 804 | 6.57e-37 | 149 |
MS.gene59988.t1 | MTR_4g134790 | 30.802 | 474 | 246 | 15 | 273 | 677 | 906 | 1366 | 6.44e-45 | 174 |
MS.gene59988.t1 | MTR_4g134790 | 38.605 | 215 | 121 | 3 | 45 | 250 | 592 | 804 | 7.11e-37 | 149 |
MS.gene59988.t1 | MTR_5g090430 | 32.895 | 380 | 230 | 9 | 263 | 628 | 544 | 912 | 1.37e-44 | 173 |
MS.gene59988.t1 | MTR_5g090430 | 37.198 | 207 | 115 | 3 | 55 | 250 | 184 | 386 | 1.18e-36 | 149 |
MS.gene59988.t1 | MTR_5g090430 | 33.784 | 370 | 220 | 9 | 273 | 628 | 441 | 799 | 2.17e-44 | 172 |
MS.gene59988.t1 | MTR_5g090430 | 37.198 | 207 | 115 | 3 | 55 | 250 | 71 | 273 | 1.29e-36 | 148 |
MS.gene59988.t1 | MTR_4g120070 | 28.392 | 479 | 246 | 11 | 298 | 686 | 610 | 1081 | 9.14e-38 | 152 |
MS.gene59988.t1 | MTR_4g120070 | 35.685 | 241 | 98 | 4 | 111 | 294 | 221 | 461 | 5.87e-36 | 146 |
MS.gene59988.t1 | MTR_3g054420 | 35.789 | 95 | 51 | 1 | 498 | 592 | 1 | 85 | 1.00e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59988.t1 | AT3G62310 | 88.128 | 716 | 80 | 3 | 1 | 712 | 1 | 715 | 0.0 | 1327 |
MS.gene59988.t1 | AT2G47250 | 85.675 | 719 | 96 | 2 | 1 | 712 | 1 | 719 | 0.0 | 1297 |
MS.gene59988.t1 | AT3G62310 | 88.168 | 524 | 57 | 3 | 1 | 520 | 1 | 523 | 0.0 | 948 |
MS.gene59988.t1 | AT3G62310 | 87.547 | 530 | 60 | 4 | 1 | 525 | 1 | 529 | 0.0 | 946 |
MS.gene59988.t1 | AT3G26560 | 53.905 | 653 | 282 | 5 | 51 | 702 | 508 | 1142 | 0.0 | 727 |
MS.gene59988.t1 | AT1G32490 | 52.504 | 659 | 293 | 9 | 50 | 705 | 386 | 1027 | 0.0 | 715 |
MS.gene59988.t1 | AT1G32490 | 52.504 | 659 | 293 | 9 | 50 | 705 | 396 | 1037 | 0.0 | 714 |
MS.gene59988.t1 | AT2G35340 | 51.662 | 662 | 298 | 9 | 48 | 705 | 394 | 1037 | 0.0 | 704 |
MS.gene59988.t1 | AT2G35340 | 51.662 | 662 | 298 | 9 | 48 | 705 | 256 | 899 | 0.0 | 703 |
MS.gene59988.t1 | AT4G16680 | 50.830 | 663 | 295 | 9 | 53 | 707 | 130 | 769 | 0.0 | 670 |
MS.gene59988.t1 | AT5G13010 | 45.329 | 653 | 329 | 8 | 51 | 694 | 551 | 1184 | 0.0 | 613 |
MS.gene59988.t1 | AT4G18465 | 46.246 | 666 | 320 | 9 | 48 | 691 | 38 | 687 | 0.0 | 593 |
MS.gene59988.t1 | AT1G26370 | 42.008 | 707 | 331 | 11 | 43 | 690 | 27 | 713 | 0.0 | 536 |
MS.gene59988.t1 | AT1G27900 | 41.231 | 650 | 346 | 11 | 58 | 685 | 4 | 639 | 3.00e-172 | 511 |
MS.gene59988.t1 | AT4G16680 | 57.576 | 429 | 165 | 4 | 53 | 481 | 210 | 621 | 2.86e-165 | 491 |
MS.gene59988.t1 | AT5G14900 | 76.655 | 287 | 64 | 2 | 429 | 712 | 2 | 288 | 2.39e-161 | 468 |
MS.gene59988.t1 | AT1G27900 | 43.352 | 549 | 287 | 8 | 58 | 596 | 4 | 538 | 1.67e-159 | 473 |
MS.gene59988.t1 | AT1G27900 | 43.219 | 553 | 290 | 8 | 58 | 600 | 4 | 542 | 1.83e-159 | 473 |
MS.gene59988.t1 | AT5G10370 | 32.481 | 665 | 389 | 16 | 58 | 689 | 306 | 943 | 4.45e-95 | 324 |
MS.gene59988.t1 | AT4G01020 | 32.485 | 668 | 385 | 17 | 58 | 689 | 303 | 940 | 1.98e-92 | 317 |
MS.gene59988.t1 | AT2G35920 | 35.601 | 441 | 252 | 13 | 254 | 677 | 430 | 855 | 2.19e-63 | 228 |
MS.gene59988.t1 | AT2G35920 | 42.929 | 198 | 107 | 2 | 55 | 250 | 167 | 360 | 7.24e-43 | 167 |
MS.gene59988.t1 | AT2G35920 | 35.601 | 441 | 252 | 13 | 254 | 677 | 488 | 913 | 3.74e-63 | 228 |
MS.gene59988.t1 | AT2G35920 | 42.929 | 198 | 107 | 2 | 55 | 250 | 225 | 418 | 9.59e-43 | 167 |
MS.gene59988.t1 | AT2G35920 | 35.601 | 441 | 252 | 13 | 254 | 677 | 520 | 945 | 5.33e-63 | 228 |
MS.gene59988.t1 | AT2G35920 | 42.929 | 198 | 107 | 2 | 55 | 250 | 257 | 450 | 1.15e-42 | 167 |
MS.gene59988.t1 | AT2G01130 | 32.319 | 427 | 250 | 12 | 270 | 675 | 431 | 839 | 2.73e-55 | 206 |
MS.gene59988.t1 | AT2G01130 | 42.925 | 212 | 116 | 3 | 39 | 250 | 139 | 345 | 1.96e-44 | 172 |
MS.gene59988.t1 | AT2G01130 | 32.319 | 427 | 250 | 12 | 270 | 675 | 496 | 904 | 4.38e-55 | 205 |
MS.gene59988.t1 | AT2G01130 | 42.925 | 212 | 116 | 3 | 39 | 250 | 204 | 410 | 2.33e-44 | 172 |
MS.gene59988.t1 | AT1G33390 | 39.510 | 286 | 145 | 3 | 47 | 304 | 230 | 515 | 3.39e-53 | 199 |
MS.gene59988.t1 | AT1G33390 | 30.222 | 450 | 235 | 9 | 304 | 686 | 645 | 1082 | 1.13e-51 | 195 |
MS.gene59988.t1 | AT1G33390 | 39.510 | 286 | 145 | 3 | 47 | 304 | 230 | 515 | 3.39e-53 | 199 |
MS.gene59988.t1 | AT1G33390 | 30.222 | 450 | 235 | 9 | 304 | 686 | 645 | 1082 | 1.13e-51 | 195 |
MS.gene59988.t1 | AT1G48650 | 31.365 | 491 | 295 | 13 | 204 | 677 | 521 | 986 | 1.29e-52 | 198 |
MS.gene59988.t1 | AT1G48650 | 45.854 | 205 | 105 | 3 | 55 | 259 | 296 | 494 | 3.74e-47 | 181 |
MS.gene59988.t1 | AT1G48650 | 31.365 | 491 | 295 | 13 | 204 | 677 | 521 | 986 | 1.54e-52 | 197 |
MS.gene59988.t1 | AT1G48650 | 45.854 | 205 | 105 | 3 | 55 | 259 | 296 | 494 | 3.39e-47 | 181 |
MS.gene59988.t1 | AT5G04895 | 32.941 | 425 | 255 | 12 | 270 | 677 | 537 | 948 | 1.99e-47 | 182 |
MS.gene59988.t1 | AT5G04895 | 43.925 | 214 | 113 | 3 | 38 | 250 | 243 | 450 | 4.55e-46 | 178 |
MS.gene59988.t1 | AT1G58060 | 29.638 | 469 | 253 | 13 | 273 | 675 | 916 | 1373 | 2.22e-45 | 176 |
MS.gene59988.t1 | AT1G58060 | 36.842 | 247 | 130 | 5 | 25 | 250 | 573 | 814 | 1.15e-37 | 152 |
MS.gene59988.t1 | AT2G30800 | 33.065 | 372 | 220 | 10 | 273 | 628 | 209 | 567 | 1.80e-43 | 169 |
MS.gene59988.t1 | AT2G30800 | 33.065 | 372 | 220 | 10 | 273 | 628 | 552 | 910 | 2.07e-43 | 170 |
MS.gene59988.t1 | AT2G30800 | 39.706 | 204 | 117 | 2 | 50 | 250 | 179 | 379 | 7.39e-42 | 165 |
MS.gene59988.t1 | AT1G58050 | 32.659 | 346 | 203 | 9 | 273 | 597 | 883 | 1219 | 1.27e-42 | 167 |
MS.gene59988.t1 | AT1G58050 | 35.317 | 252 | 141 | 6 | 12 | 250 | 552 | 794 | 3.61e-36 | 147 |
MS.gene59988.t1 | AT1G06670 | 39.713 | 209 | 119 | 3 | 46 | 250 | 204 | 409 | 2.06e-41 | 164 |
MS.gene59988.t1 | AT1G06670 | 33.435 | 329 | 194 | 8 | 273 | 588 | 576 | 892 | 8.90e-39 | 155 |
MS.gene59988.t1 | AT1G06670 | 39.713 | 209 | 119 | 3 | 46 | 250 | 204 | 409 | 2.33e-41 | 164 |
MS.gene59988.t1 | AT1G06670 | 33.435 | 329 | 194 | 8 | 273 | 588 | 576 | 892 | 6.57e-39 | 156 |
MS.gene59988.t1 | AT2G47680 | 28.986 | 414 | 244 | 10 | 57 | 438 | 25 | 420 | 4.25e-37 | 150 |
Find 185 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAAAAGAAGTTGCAAATTT+AGG | 0.095057 | 6.1:-71993585 | MS.gene59988:CDS |
TCCATCAATGTGTGCAAATT+TGG | 0.136562 | 6.1:+71992532 | None:intergenic |
CCTGTAAGAATTCATCTTTC+TGG | 0.146253 | 6.1:+71994535 | None:intergenic |
CGAAAGGTACTACGAAATTT+TGG | 0.209571 | 6.1:-71994586 | MS.gene59988:CDS |
ACGACAACTTCGTTAATAAT+AGG | 0.221173 | 6.1:-71992359 | MS.gene59988:CDS |
TAAAAGAAGTTGCAAATTTA+GGG | 0.237571 | 6.1:-71993584 | MS.gene59988:CDS |
CCAGAAAGATGAATTCTTAC+AGG | 0.249323 | 6.1:-71994535 | MS.gene59988:CDS |
AGATTAGATCTCAGAATTTC+AGG | 0.250457 | 6.1:+71993192 | None:intergenic |
ATCATCTTCCTACGTTTATC+TGG | 0.260360 | 6.1:+71994263 | None:intergenic |
TGAGGCTTTATTTACGATTC+CGG | 0.277967 | 6.1:+71991431 | None:intergenic |
TTCCACCGGGTGTAGCCTTC+CGG | 0.286224 | 6.1:+71993752 | None:intergenic |
AGTTCTTACATTGAAGAAAC+TGG | 0.293038 | 6.1:-71993160 | MS.gene59988:CDS |
GCCAAATTTGCACACATTGA+TGG | 0.293058 | 6.1:-71992533 | MS.gene59988:CDS |
TGCTATTAATACAGTGTTGC+AGG | 0.293596 | 6.1:-71993688 | MS.gene59988:CDS |
AGCAATGACGGATCCACTTT+TGG | 0.303630 | 6.1:-71993958 | MS.gene59988:CDS |
CACTTGAAGCTGAAAAGTTT+CGG | 0.315307 | 6.1:-71993809 | MS.gene59988:CDS |
ACTTGAAGCTGAAAAGTTTC+GGG | 0.333059 | 6.1:-71993808 | MS.gene59988:CDS |
ACAGATCCCTCAGTTTGTTT+TGG | 0.333268 | 6.1:-71994306 | MS.gene59988:intron |
TCGATTACCGCCATGCTATC+AGG | 0.341614 | 6.1:-71992925 | MS.gene59988:intron |
CAAAATTTCGTAGTACCTTT+CGG | 0.342146 | 6.1:+71994587 | None:intergenic |
AAAATCTTCTGCTGCATAGC+TGG | 0.357946 | 6.1:+71993513 | None:intergenic |
GATACCACAATCTTCCTTCC+AGG | 0.358259 | 6.1:+71993453 | None:intergenic |
TTGATTCTCGTTGGTGAAAC+TGG | 0.361552 | 6.1:-71994492 | MS.gene59988:CDS |
CCCACTTGGGCTTGTGATCC+AGG | 0.362438 | 6.1:+71992008 | None:intergenic |
TGTGCTCTTCGGTCTTCTTA+AGG | 0.367337 | 6.1:-71993880 | MS.gene59988:CDS |
AGTTCGTGTTGAGTCTTTGT+TGG | 0.372594 | 6.1:-71993340 | MS.gene59988:CDS |
TCGTAGTACCTTTCGGAGTA+AGG | 0.379277 | 6.1:+71994594 | None:intergenic |
TCACCCTACATTTCGGCCTC+TGG | 0.380561 | 6.1:-71991411 | MS.gene59988:CDS |
TTCCAGCACGCCCAGCTCTC+TGG | 0.381460 | 6.1:+71993289 | None:intergenic |
CCTAGGTCGGATAAAGCAAT+TGG | 0.382504 | 6.1:+71992586 | None:intergenic |
TGATGGGAACAGAGAGGAAG+AGG | 0.387971 | 6.1:-71994722 | MS.gene59988:CDS |
GAGGCTTTATTTACGATTCC+GGG | 0.389357 | 6.1:+71991432 | None:intergenic |
AGAGCACGCATTAAGGTCTC+TGG | 0.392130 | 6.1:+71993093 | None:intergenic |
GCCCCTCTTCTGAAAGTTCC+CGG | 0.395668 | 6.1:-71993771 | MS.gene59988:CDS |
TAAAGCCTCACCCTACATTT+CGG | 0.396409 | 6.1:-71991418 | MS.gene59988:CDS |
CACCAGAGAGCTGGGCGTGC+TGG | 0.396501 | 6.1:-71993291 | MS.gene59988:CDS |
CACTTCGAGAGCACGCATTA+AGG | 0.396663 | 6.1:+71993086 | None:intergenic |
CCTCCCTCTGTAACTGGAGG+TGG | 0.399259 | 6.1:+71993480 | None:intergenic |
AAGAGATGGATGTGACTATT+GGG | 0.402137 | 6.1:-71994181 | MS.gene59988:CDS |
AAAGGAAGACCCTTCCTGTT+TGG | 0.404959 | 6.1:-71994560 | MS.gene59988:CDS |
CGCATTAAGGTCTCTGGGGC+AGG | 0.409505 | 6.1:+71993099 | None:intergenic |
GAAACTTCCCTGACAATTGA+TGG | 0.410915 | 6.1:-71993417 | MS.gene59988:CDS |
TCCACCGGGTGTAGCCTTCC+GGG | 0.411505 | 6.1:+71993753 | None:intergenic |
TCATCTTTCTGGTGCCAAAC+AGG | 0.415049 | 6.1:+71994546 | None:intergenic |
CCACTTTCACAGGGCCAACC+TGG | 0.416008 | 6.1:+71993559 | None:intergenic |
ATATTACGATGTCAACTTGC+AGG | 0.417876 | 6.1:+71991366 | None:intergenic |
CGACAACTTCGTTAATAATA+GGG | 0.421091 | 6.1:-71992358 | MS.gene59988:CDS |
TCTCGAAGTGTTGAATTACT+TGG | 0.421382 | 6.1:-71993073 | MS.gene59988:CDS |
TCTGTAACTGGAGGTGGAGC+TGG | 0.426881 | 6.1:+71993486 | None:intergenic |
ACCTTCTGCTTAGCAAATCC+AGG | 0.431583 | 6.1:+71993375 | None:intergenic |
CTACATTTCGGCCTCTGGAT+TGG | 0.431650 | 6.1:-71991406 | MS.gene59988:CDS |
AGACTATACCATCAATTGTC+AGG | 0.434341 | 6.1:+71993409 | None:intergenic |
GAAGAGATGGATGTGACTAT+TGG | 0.440619 | 6.1:-71994182 | MS.gene59988:CDS |
AGATCCTGAGAGGGATTACT+TGG | 0.448017 | 6.1:-71993715 | MS.gene59988:CDS |
CACCAACGAGAATCAAAGTC+TGG | 0.452169 | 6.1:+71994499 | None:intergenic |
ACTTTGTATCGTTCCAAAAG+TGG | 0.463078 | 6.1:+71993945 | None:intergenic |
GTATGTCTCCAGCAGGTTCA+AGG | 0.465031 | 6.1:+71993658 | None:intergenic |
CTTCAATGTAAGAACTGTGT+TGG | 0.466640 | 6.1:+71993167 | None:intergenic |
TTTGCATCCATCAAATTGCC+TGG | 0.471358 | 6.1:-71992026 | MS.gene59988:CDS |
GCTAGTGCACACCAGAGAGC+TGG | 0.472382 | 6.1:-71993300 | MS.gene59988:CDS |
GTGACTATTGGGGAAGAGGT+TGG | 0.473162 | 6.1:-71994170 | MS.gene59988:CDS |
AAATCTTCTGCTGCATAGCT+GGG | 0.474547 | 6.1:+71993514 | None:intergenic |
CAATCCAGAGGCCGAAATGT+AGG | 0.481340 | 6.1:+71991407 | None:intergenic |
AGGACTAACAACAAGCATCT+TGG | 0.482741 | 6.1:+71992975 | None:intergenic |
TACAATGGTACCACTTTCAC+AGG | 0.484224 | 6.1:+71993549 | None:intergenic |
TTGGCTACAGATGTGCTCTT+CGG | 0.485260 | 6.1:-71993891 | MS.gene59988:CDS |
TTGTGATCCAGGCAATTTGA+TGG | 0.486167 | 6.1:+71992019 | None:intergenic |
AGTTGCAAATTTAGGGTCCC+AGG | 0.487778 | 6.1:-71993577 | MS.gene59988:CDS |
CCAGGTTGGCCCTGTGAAAG+TGG | 0.495963 | 6.1:-71993559 | MS.gene59988:CDS |
ATAAGAAAGGCAATGCTAGC+AGG | 0.500431 | 6.1:-71992228 | MS.gene59988:CDS |
GTTGAATTACTTGGGTGCAC+TGG | 0.506759 | 6.1:-71993064 | MS.gene59988:CDS |
AACCAGACTTTGATTCTCGT+TGG | 0.507479 | 6.1:-71994501 | MS.gene59988:CDS |
CGATGACTCTGCTGCTAAGA+GGG | 0.514499 | 6.1:-71994673 | MS.gene59988:CDS |
CCCTGGATTTGCTAAGCAGA+AGG | 0.521435 | 6.1:-71993376 | MS.gene59988:CDS |
GCTTCCAAGTAATCCCTCTC+AGG | 0.524150 | 6.1:+71993711 | None:intergenic |
ATAACCACCAACTTCAAGTC+AGG | 0.524486 | 6.1:+71993840 | None:intergenic |
GGGAACAGAGAGGAAGAGGA+AGG | 0.525724 | 6.1:-71994718 | MS.gene59988:CDS |
ATAGTCTATGTTATTGACCC+TGG | 0.526353 | 6.1:-71993393 | MS.gene59988:CDS |
TTCCGGGAACTTTCAGAAGA+GGG | 0.526449 | 6.1:+71993769 | None:intergenic |
CTCGAAGTGTTGAATTACTT+GGG | 0.527081 | 6.1:-71993072 | MS.gene59988:CDS |
TGAGGCACATGAAAGGACTT+TGG | 0.527365 | 6.1:-71993910 | MS.gene59988:CDS |
TTCATTGTAGATAACCCACT+TGG | 0.528625 | 6.1:+71991994 | None:intergenic |
AAACAGACCTGACTTGAAGT+TGG | 0.531317 | 6.1:-71993847 | MS.gene59988:CDS |
AATCCAGAGGCCGAAATGTA+GGG | 0.532002 | 6.1:+71991408 | None:intergenic |
GGATGTGACTATTGGGGAAG+AGG | 0.533162 | 6.1:-71994174 | MS.gene59988:CDS |
TGACGGACATACGCGGGGAA+TGG | 0.533415 | 6.1:-71991937 | MS.gene59988:intron |
CCGCCGTGTGGCTGAAGAGA+TGG | 0.533749 | 6.1:-71994195 | MS.gene59988:CDS |
GTTCACACCCTTGAACCTGC+TGG | 0.534655 | 6.1:-71993666 | MS.gene59988:CDS |
ATTAAGGTCTCTGGGGCAGG+AGG | 0.534663 | 6.1:+71993102 | None:intergenic |
CAATTGCTTTATCCGACCTA+GGG | 0.536273 | 6.1:-71992585 | MS.gene59988:CDS |
TTTCAGATGAGGATGCGTCT+TGG | 0.537349 | 6.1:-71992386 | MS.gene59988:intron |
CACTTTCACAGGGCCAACCT+GGG | 0.538377 | 6.1:+71993560 | None:intergenic |
CTTTCTGGTGCCAAACAGGA+AGG | 0.540765 | 6.1:+71994550 | None:intergenic |
CTCGTTGGTGAAACTGGTAG+TGG | 0.542316 | 6.1:-71994486 | MS.gene59988:CDS |
GAGCACGCATTAAGGTCTCT+GGG | 0.544415 | 6.1:+71993094 | None:intergenic |
GAAGGTAACTTAACAAAGCT+CGG | 0.544524 | 6.1:-71993036 | MS.gene59988:CDS |
CATCTCTTCAGCCACACGGC+GGG | 0.547536 | 6.1:+71994196 | None:intergenic |
CTAGTGCACACCAGAGAGCT+GGG | 0.549081 | 6.1:-71993299 | MS.gene59988:CDS |
GTGATAGTCTCATTAACAGC+TGG | 0.549151 | 6.1:-71994626 | MS.gene59988:CDS |
CTACTACGTCAACATAAGAA+AGG | 0.551235 | 6.1:-71992241 | MS.gene59988:CDS |
GTGGCTCATCTTGAGCGGAC+AGG | 0.551298 | 6.1:-71992192 | MS.gene59988:CDS |
CGTGCTGGAAGAACTCAACC+AGG | 0.555751 | 6.1:-71993276 | MS.gene59988:CDS |
CTAGGTCGGATAAAGCAATT+GGG | 0.557504 | 6.1:+71992587 | None:intergenic |
ACAACAGCTAGTGCGTATCA+TGG | 0.558197 | 6.1:-71992310 | MS.gene59988:CDS |
ATACCACAATCTTCCTTCCA+GGG | 0.559873 | 6.1:+71993454 | None:intergenic |
AGCTAGTGCGTATCATGGCT+CGG | 0.562361 | 6.1:-71992305 | MS.gene59988:CDS |
TTGAAGATTGTAGTGGTGCA+AGG | 0.562883 | 6.1:-71994133 | MS.gene59988:CDS |
AAAACAAGTATGTCTCCAGC+AGG | 0.564551 | 6.1:+71993651 | None:intergenic |
CCAATTGCTTTATCCGACCT+AGG | 0.565444 | 6.1:-71992586 | MS.gene59988:CDS |
ACACGCTTCGCTTCACATTG+TGG | 0.566257 | 6.1:+71991483 | None:intergenic |
CTTGACAGTGAAAGACAACC+AGG | 0.567630 | 6.1:-71992163 | MS.gene59988:intron |
ACGATGACTCTGCTGCTAAG+AGG | 0.567819 | 6.1:-71994674 | MS.gene59988:CDS |
TATGTCTCCAGCAGGTTCAA+GGG | 0.569169 | 6.1:+71993659 | None:intergenic |
AGTCTCATTAACAGCTGGAA+CGG | 0.573645 | 6.1:-71994621 | MS.gene59988:CDS |
GGGCCTCCCTCTGTAACTGG+AGG | 0.575165 | 6.1:+71993477 | None:intergenic |
CAGACCTGACTTGAAGTTGG+TGG | 0.576381 | 6.1:-71993844 | MS.gene59988:CDS |
GATTATGAGCGAGTTTCCGT+TGG | 0.577977 | 6.1:-71993010 | MS.gene59988:CDS |
CAAAGTAATTATTCTTGATG+AGG | 0.579181 | 6.1:-71993928 | MS.gene59988:CDS |
TCGTTTGAACAGTTGAACTC+AGG | 0.579830 | 6.1:+71992955 | None:intergenic |
TAAAGTCTGAAGCATTTCCC+TGG | 0.580106 | 6.1:+71993258 | None:intergenic |
ACAAGCATCTTGGACATCTG+AGG | 0.582390 | 6.1:+71992985 | None:intergenic |
CATTGCAGGTATCTAACAGA+TGG | 0.584996 | 6.1:-71993996 | MS.gene59988:intron |
GACTATACCATCAATTGTCA+GGG | 0.585147 | 6.1:+71993410 | None:intergenic |
TCCGGGAACTTTCAGAAGAG+GGG | 0.585424 | 6.1:+71993770 | None:intergenic |
GAGAATCATACCTGATAGCA+TGG | 0.589279 | 6.1:+71992915 | None:intergenic |
TTATACTAAAGATCCTGAGA+GGG | 0.590897 | 6.1:-71993724 | MS.gene59988:CDS |
AATCTTCTGCTGCATAGCTG+GGG | 0.591377 | 6.1:+71993515 | None:intergenic |
ATGCACTCAGCCTCGTAGAG+TGG | 0.592238 | 6.1:-71994234 | MS.gene59988:CDS |
AGAGGCCGAAATGTAGGGTG+AGG | 0.592984 | 6.1:+71991413 | None:intergenic |
TTCTTGATGAGGCACATGAA+AGG | 0.595611 | 6.1:-71993917 | MS.gene59988:CDS |
AAAGACTCAACACGAACTCG+AGG | 0.597221 | 6.1:+71993345 | None:intergenic |
CTTCCGGGAACTTTCAGAAG+AGG | 0.600508 | 6.1:+71993768 | None:intergenic |
GCAAATTTAGGGTCCCAGGT+TGG | 0.604428 | 6.1:-71993573 | MS.gene59988:CDS |
CTCTTCTGAAAGTTCCCGGA+AGG | 0.605168 | 6.1:-71993767 | MS.gene59988:CDS |
GCTTCTGAGAGAAGCAATGA+CGG | 0.606633 | 6.1:-71993970 | MS.gene59988:CDS |
TTAAGGTCTCTGGGGCAGGA+GGG | 0.608444 | 6.1:+71993103 | None:intergenic |
GCCTGGATCACAAGCCCAAG+TGG | 0.608892 | 6.1:-71992009 | MS.gene59988:CDS |
AGCAGGATATTTCATGCAGG+TGG | 0.610174 | 6.1:-71992211 | MS.gene59988:CDS |
ATCAGATTTGAAGATTGTAG+TGG | 0.611330 | 6.1:-71994140 | MS.gene59988:CDS |
TTGGACATCTGAGGGTCCAA+CGG | 0.612778 | 6.1:+71992994 | None:intergenic |
TTTATACTAAAGATCCTGAG+AGG | 0.616133 | 6.1:-71993725 | MS.gene59988:CDS |
ACGGAAAACCTTACTCCGAA+AGG | 0.616364 | 6.1:-71994602 | MS.gene59988:CDS |
TGCAGGTGGCTCATCTTGAG+CGG | 0.617552 | 6.1:-71992197 | MS.gene59988:CDS |
GCAGCTTCCAAAACAAACTG+AGG | 0.618791 | 6.1:+71994299 | None:intergenic |
GTTCTTACATTGAAGAAACT+GGG | 0.618997 | 6.1:-71993159 | MS.gene59988:CDS |
TTTCTGGTGCCAAACAGGAA+GGG | 0.620769 | 6.1:+71994551 | None:intergenic |
ATGAATACGTTCTGACCAGT+CGG | 0.622397 | 6.1:-71991976 | MS.gene59988:CDS |
CAAGCATCTTGGACATCTGA+GGG | 0.623893 | 6.1:+71992986 | None:intergenic |
CAGCTTCCAAAACAAACTGA+GGG | 0.627735 | 6.1:+71994300 | None:intergenic |
GCTAGCAGGATATTTCATGC+AGG | 0.627840 | 6.1:-71992214 | MS.gene59988:CDS |
AGCTGTTAATGAGACTATCA+CGG | 0.628097 | 6.1:+71994628 | None:intergenic |
TACCACAATCTTCCTTCCAG+GGG | 0.628659 | 6.1:+71993455 | None:intergenic |
AGCTCCACCTCCAGTTACAG+AGG | 0.630152 | 6.1:-71993484 | MS.gene59988:CDS |
GTACTGTGACGGACATACGC+GGG | 0.632492 | 6.1:-71991943 | MS.gene59988:CDS |
CATCCATCTCTTCAGCCACA+CGG | 0.632610 | 6.1:+71994192 | None:intergenic |
ATCTTCTGCTGCATAGCTGG+GGG | 0.635596 | 6.1:+71993516 | None:intergenic |
AGTACGTATAAAATTCCGAC+TGG | 0.636105 | 6.1:+71991961 | None:intergenic |
TTAGACAAATCATAGTAATG+TGG | 0.637983 | 6.1:+71991510 | None:intergenic |
AGAGATGGATGTGACTATTG+GGG | 0.639115 | 6.1:-71994180 | MS.gene59988:CDS |
TCATTGTAGATAACCCACTT+GGG | 0.639363 | 6.1:+71991995 | None:intergenic |
AACATCAAATTCCAATCCAG+AGG | 0.642225 | 6.1:+71991395 | None:intergenic |
TTGATTTGATGGGAACAGAG+AGG | 0.647425 | 6.1:-71994728 | None:intergenic |
CCTTCTGCTTAGCAAATCCA+GGG | 0.648485 | 6.1:+71993376 | None:intergenic |
CGTACTGTGACGGACATACG+CGG | 0.649221 | 6.1:-71991944 | MS.gene59988:CDS |
AATGTCTGTTTCCCGCCGTG+TGG | 0.650873 | 6.1:-71994207 | MS.gene59988:CDS |
AGTTCCCGGAAGGCTACACC+CGG | 0.653563 | 6.1:-71993757 | MS.gene59988:CDS |
TTATGTTGACGTAGTAGTCG+CGG | 0.654635 | 6.1:+71992247 | None:intergenic |
GACATTGCAGCCACTCTACG+AGG | 0.655738 | 6.1:+71994224 | None:intergenic |
TTGGGTGCACTGGATGATGA+AGG | 0.657309 | 6.1:-71993054 | MS.gene59988:CDS |
CCTGGATCACAAGCCCAAGT+GGG | 0.659222 | 6.1:-71992008 | MS.gene59988:CDS |
TCCCGGAAGGCTACACCCGG+TGG | 0.660405 | 6.1:-71993754 | MS.gene59988:CDS |
CCACCTCCAGTTACAGAGGG+AGG | 0.661788 | 6.1:-71993480 | MS.gene59988:CDS |
GCTCCACCTCCAGTTACAGA+GGG | 0.661909 | 6.1:-71993483 | MS.gene59988:CDS |
ACCACAATCTTCCTTCCAGG+GGG | 0.663082 | 6.1:+71993456 | None:intergenic |
AAGACTCAACACGAACTCGA+GGG | 0.667733 | 6.1:+71993346 | None:intergenic |
TGGTAGTGGCAAAACTACAC+AGG | 0.668865 | 6.1:-71994472 | MS.gene59988:intron |
AGAATTTCAGGATATGTCTG+CGG | 0.675913 | 6.1:+71993204 | None:intergenic |
TAGAGACTCCAGATAAACGT+AGG | 0.685609 | 6.1:-71994271 | MS.gene59988:CDS |
TACTGTGACGGACATACGCG+GGG | 0.694347 | 6.1:-71991942 | MS.gene59988:CDS |
CCATCTCTTCAGCCACACGG+CGG | 0.704471 | 6.1:+71994195 | None:intergenic |
AGCACGCATTAAGGTCTCTG+GGG | 0.707760 | 6.1:+71993095 | None:intergenic |
CCACAATCTTCCTTCCAGGG+GGG | 0.732599 | 6.1:+71993457 | None:intergenic |
ACAATGGTACCACTTTCACA+GGG | 0.749295 | 6.1:+71993550 | None:intergenic |
GTGCTGGAAGAACTCAACCA+GGG | 0.755525 | 6.1:-71993275 | MS.gene59988:CDS |
AATCATACCTGATAGCATGG+CGG | 0.798994 | 6.1:+71992918 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAATGCTTTACAAAAAT+CGG | - | chr6.1:71994639-71994658 | MS.gene59988:CDS | 15.0% |
!! | ACATAGAGTAATATAATATC+AGG | + | chr6.1:71992018-71992037 | None:intergenic | 20.0% |
!! | ACATGATATTTCAGTAATTA+AGG | + | chr6.1:71994432-71994451 | None:intergenic | 20.0% |
!! | CATAGAGTAATATAATATCA+GGG | + | chr6.1:71992017-71992036 | None:intergenic | 20.0% |
!! | TAAAAGAAGTTGCAAATTTA+GGG | - | chr6.1:71992513-71992532 | MS.gene59988:CDS | 20.0% |
!! | TAATTAAGGATTATAAACCA+CGG | + | chr6.1:71994418-71994437 | None:intergenic | 20.0% |
!! | TCAATATATTCAAAAAGTTG+AGG | + | chr6.1:71994488-71994507 | None:intergenic | 20.0% |
!! | TGTAAATAGTAATATCCATT+TGG | - | chr6.1:71994197-71994216 | MS.gene59988:CDS | 20.0% |
!! | TTAAAAGAAGTTGCAAATTT+AGG | - | chr6.1:71992512-71992531 | MS.gene59988:CDS | 20.0% |
!! | TTAGTATAAAAAATTTCCAC+CGG | + | chr6.1:71992362-71992381 | None:intergenic | 20.0% |
!! | TTCTAACATAATTAACGAAA+TGG | + | chr6.1:71994346-71994365 | None:intergenic | 20.0% |
!!! | ATCATTGTTGAAACTATTTT+CGG | + | chr6.1:71992867-71992886 | None:intergenic | 20.0% |
! | ATTCGTGTAATAGTTAAACA+AGG | + | chr6.1:71994308-71994327 | None:intergenic | 25.0% |
! | CAAAGTAATTATTCTTGATG+AGG | - | chr6.1:71992169-71992188 | MS.gene59988:CDS | 25.0% |
! | GAAATAGATTATCACATAAG+AGG | + | chr6.1:71993479-71993498 | None:intergenic | 25.0% |
! | GTTTATTAAATGCATGTGAA+TGG | - | chr6.1:71993686-71993705 | MS.gene59988:CDS | 25.0% |
! | TAGTATAAAAAATTTCCACC+GGG | + | chr6.1:71992361-71992380 | None:intergenic | 25.0% |
! | TGCATAAAAGAAAAAATGCT+GGG | + | chr6.1:71993298-71993317 | None:intergenic | 25.0% |
! | TTAGACAAATCATAGTAATG+TGG | + | chr6.1:71994590-71994609 | None:intergenic | 25.0% |
! | TTCGTGTAATAGTTAAACAA+GGG | + | chr6.1:71994307-71994326 | None:intergenic | 25.0% |
!! | ACGAAATGGTAAAAGTATAT+AGG | + | chr6.1:71994332-71994351 | None:intergenic | 25.0% |
!! | CAACTTCTTTTAATATTCTG+CGG | + | chr6.1:71992505-71992524 | None:intergenic | 25.0% |
!!! | GCACATAATTTTTGTTATAC+TGG | - | chr6.1:71993364-71993383 | MS.gene59988:CDS | 25.0% |
AATCCATTTCAAATGAATCC+CGG | + | chr6.1:71993275-71993294 | None:intergenic | 30.0% | |
AATCTATTATTTCCCATTGC+AGG | - | chr6.1:71992087-71992106 | MS.gene59988:intron | 30.0% | |
ACCTAACAAACGAATAAGAT+AGG | + | chr6.1:71991702-71991721 | None:intergenic | 30.0% | |
ACGACAACTTCGTTAATAAT+AGG | - | chr6.1:71993738-71993757 | MS.gene59988:CDS | 30.0% | |
AGATTAGATCTCAGAATTTC+AGG | + | chr6.1:71992908-71992927 | None:intergenic | 30.0% | |
AGTTCTTACATTGAAGAAAC+TGG | - | chr6.1:71992937-71992956 | MS.gene59988:CDS | 30.0% | |
ATCAGATTTGAAGATTGTAG+TGG | - | chr6.1:71991957-71991976 | MS.gene59988:CDS | 30.0% | |
ATGTCCCATTAAAATTACAG+TGG | + | chr6.1:71993245-71993264 | None:intergenic | 30.0% | |
CAAAATTTCGTAGTACCTTT+CGG | + | chr6.1:71991513-71991532 | None:intergenic | 30.0% | |
CAATAACATCAAAAACCACA+AGG | + | chr6.1:71994515-71994534 | None:intergenic | 30.0% | |
CGACAACTTCGTTAATAATA+GGG | - | chr6.1:71993739-71993758 | MS.gene59988:CDS | 30.0% | |
GAATATATTGAGTAACCTTG+TGG | - | chr6.1:71994497-71994516 | MS.gene59988:CDS | 30.0% | |
GCAATGGGAAATAATAGATT+GGG | + | chr6.1:71992087-71992106 | None:intergenic | 30.0% | |
GTGCATAAAAGAAAAAATGC+TGG | + | chr6.1:71993299-71993318 | None:intergenic | 30.0% | |
GTTCTTACATTGAAGAAACT+GGG | - | chr6.1:71992938-71992957 | MS.gene59988:CDS | 30.0% | |
TCAAATTTATGATTCTGCTC+TGG | - | chr6.1:71994035-71994054 | MS.gene59988:intron | 30.0% | |
TCCTATCTTATTCGTTTGTT+AGG | - | chr6.1:71991698-71991717 | MS.gene59988:intron | 30.0% | |
TGCAATGGGAAATAATAGAT+TGG | + | chr6.1:71992088-71992107 | None:intergenic | 30.0% | |
TGTCCCATTAAAATTACAGT+GGG | + | chr6.1:71993244-71993263 | None:intergenic | 30.0% | |
TTATACTAAAGATCCTGAGA+GGG | - | chr6.1:71992373-71992392 | MS.gene59988:CDS | 30.0% | |
TTTATACTAAAGATCCTGAG+AGG | - | chr6.1:71992372-71992391 | MS.gene59988:CDS | 30.0% | |
! | GAATTTTATACGTACTGTGA+CGG | - | chr6.1:71994143-71994162 | MS.gene59988:CDS | 30.0% |
!! | AATGATGATTTTAGCAAACC+TGG | + | chr6.1:71993955-71993974 | None:intergenic | 30.0% |
!! | ACTACGAAATTTTGGAGAAA+AGG | - | chr6.1:71991519-71991538 | MS.gene59988:CDS | 30.0% |
!! | AGTCCCACTGTAATTTTAAT+GGG | - | chr6.1:71993238-71993257 | MS.gene59988:CDS | 30.0% |
!! | GACATACTTGTTTTTCTTAC+TGG | - | chr6.1:71992455-71992474 | MS.gene59988:intron | 30.0% |
!! | TGAATTCTTACAGGTTTTGA+AGG | - | chr6.1:71991571-71991590 | MS.gene59988:intron | 30.0% |
!!! | TTTAGTGCATTTTGACTTCA+TGG | - | chr6.1:71992970-71992989 | MS.gene59988:CDS | 30.0% |
AACATCAAATTCCAATCCAG+AGG | + | chr6.1:71994705-71994724 | None:intergenic | 35.0% | |
AAGAGATGGATGTGACTATT+GGG | - | chr6.1:71991916-71991935 | MS.gene59988:intron | 35.0% | |
ACTTGAAGCTGAAAAGTTTC+GGG | - | chr6.1:71992289-71992308 | MS.gene59988:CDS | 35.0% | |
ACTTTGTATCGTTCCAAAAG+TGG | + | chr6.1:71992155-71992174 | None:intergenic | 35.0% | |
AGAATTTCAGGATATGTCTG+CGG | + | chr6.1:71992896-71992915 | None:intergenic | 35.0% | |
AGACTATACCATCAATTGTC+AGG | + | chr6.1:71992691-71992710 | None:intergenic | 35.0% | |
AGCTGTTAATGAGACTATCA+CGG | + | chr6.1:71991472-71991491 | None:intergenic | 35.0% | |
AGTACGTATAAAATTCCGAC+TGG | + | chr6.1:71994139-71994158 | None:intergenic | 35.0% | |
AGTTCGAGGTATAAAACTGA+TGG | + | chr6.1:71994271-71994290 | None:intergenic | 35.0% | |
ATAGTCTATGTTATTGACCC+TGG | - | chr6.1:71992704-71992723 | MS.gene59988:intron | 35.0% | |
ATCATCTTCCTACGTTTATC+TGG | + | chr6.1:71991837-71991856 | None:intergenic | 35.0% | |
ATCTGTTAGATACCTGCAAT+GGG | + | chr6.1:71992102-71992121 | None:intergenic | 35.0% | |
CACTTGAAGCTGAAAAGTTT+CGG | - | chr6.1:71992288-71992307 | MS.gene59988:CDS | 35.0% | |
CCAGAAAGATGAATTCTTAC+AGG | - | chr6.1:71991562-71991581 | MS.gene59988:intron | 35.0% | |
CCTGTAAGAATTCATCTTTC+TGG | + | chr6.1:71991565-71991584 | None:intergenic | 35.0% | |
CCTGTCAGAAAACAAATGAT+CGG | + | chr6.1:71994552-71994571 | None:intergenic | 35.0% | |
CTACTACGTCAACATAAGAA+AGG | - | chr6.1:71993856-71993875 | MS.gene59988:CDS | 35.0% | |
CTTCAATGTAAGAACTGTGT+TGG | + | chr6.1:71992933-71992952 | None:intergenic | 35.0% | |
GAAGGTAACTTAACAAAGCT+CGG | - | chr6.1:71993061-71993080 | MS.gene59988:CDS | 35.0% | |
GACTATACCATCAATTGTCA+GGG | + | chr6.1:71992690-71992709 | None:intergenic | 35.0% | |
TACCAAAATATCTACCGTCT+TGG | - | chr6.1:71993998-71994017 | MS.gene59988:intron | 35.0% | |
TCACATAAGAGGTCTATGAA+AGG | + | chr6.1:71993468-71993487 | None:intergenic | 35.0% | |
TCATTGTAGATAACCCACTT+GGG | + | chr6.1:71994105-71994124 | None:intergenic | 35.0% | |
TCCATCAATGTGTGCAAATT+TGG | + | chr6.1:71993568-71993587 | None:intergenic | 35.0% | |
TGCTATTAATACAGTGTTGC+AGG | - | chr6.1:71992409-71992428 | MS.gene59988:intron | 35.0% | |
TTAGTTTCTGTACTCTCTCT+TGG | - | chr6.1:71991648-71991667 | MS.gene59988:intron | 35.0% | |
TTATGCACAGACATATGACA+GGG | - | chr6.1:71993311-71993330 | MS.gene59988:CDS | 35.0% | |
TTCATTGTAGATAACCCACT+TGG | + | chr6.1:71994106-71994125 | None:intergenic | 35.0% | |
TTTATGCACAGACATATGAC+AGG | - | chr6.1:71993310-71993329 | MS.gene59988:CDS | 35.0% | |
! | GAGTCCCACTGTAATTTTAA+TGG | - | chr6.1:71993237-71993256 | MS.gene59988:CDS | 35.0% |
! | TCACTTACTGTTTTGCTTGT+AGG | + | chr6.1:71993622-71993641 | None:intergenic | 35.0% |
!! | ACTTGTTTTTCTTACTGGAG+AGG | - | chr6.1:71992460-71992479 | MS.gene59988:intron | 35.0% |
!! | CTCGAAGTGTTGAATTACTT+GGG | - | chr6.1:71993025-71993044 | MS.gene59988:CDS | 35.0% |
!! | TCATTTGTTTTCTGACAGGT+TGG | - | chr6.1:71994553-71994572 | MS.gene59988:CDS | 35.0% |
!! | TCTCGAAGTGTTGAATTACT+TGG | - | chr6.1:71993024-71993043 | MS.gene59988:CDS | 35.0% |
!! | TGAGGCTTTATTTACGATTC+CGG | + | chr6.1:71994669-71994688 | None:intergenic | 35.0% |
!!! | AAGTTTCGGGCCTATTTTTT+TGG | - | chr6.1:71992302-71992321 | MS.gene59988:CDS | 35.0% |
!!! | CGAAAGGTACTACGAAATTT+TGG | - | chr6.1:71991511-71991530 | MS.gene59988:CDS | 35.0% |
!!! | TGTGCACTAGCTTTTGATAT+TGG | + | chr6.1:71992788-71992807 | None:intergenic | 35.0% |
AAAACAAGTATGTCTCCAGC+AGG | + | chr6.1:71992449-71992468 | None:intergenic | 40.0% | |
AAAATCTTCTGCTGCATAGC+TGG | + | chr6.1:71992587-71992606 | None:intergenic | 40.0% | |
AAAGCTTCACGCTATTGAAG+TGG | - | chr6.1:71994391-71994410 | MS.gene59988:intron | 40.0% | |
AAATCTTCTGCTGCATAGCT+GGG | + | chr6.1:71992586-71992605 | None:intergenic | 40.0% | |
AACCAGACTTTGATTCTCGT+TGG | - | chr6.1:71991596-71991615 | MS.gene59988:intron | 40.0% | |
AAGAGGGCAAAAACTAACGA+CGG | - | chr6.1:71991440-71991459 | MS.gene59988:CDS | 40.0% | |
AAGAGGGGCTCCAAAAAAAT+AGG | + | chr6.1:71992315-71992334 | None:intergenic | 40.0% | |
AATCATACCTGATAGCATGG+CGG | + | chr6.1:71993182-71993201 | None:intergenic | 40.0% | |
ACAATGGTACCACTTTCACA+GGG | + | chr6.1:71992550-71992569 | None:intergenic | 40.0% | |
AGAGATGGATGTGACTATTG+GGG | - | chr6.1:71991917-71991936 | MS.gene59988:intron | 40.0% | |
AGGACTAACAACAAGCATCT+TGG | + | chr6.1:71993125-71993144 | None:intergenic | 40.0% | |
AGTCTCATTAACAGCTGGAA+CGG | - | chr6.1:71991476-71991495 | MS.gene59988:CDS | 40.0% | |
AGTTCGTGTTGAGTCTTTGT+TGG | - | chr6.1:71992757-71992776 | MS.gene59988:intron | 40.0% | |
ATAACCACCAACTTCAAGTC+AGG | + | chr6.1:71992260-71992279 | None:intergenic | 40.0% | |
ATAAGAAAGGCAATGCTAGC+AGG | - | chr6.1:71993869-71993888 | MS.gene59988:CDS | 40.0% | |
ATACCACAATCTTCCTTCCA+GGG | + | chr6.1:71992646-71992665 | None:intergenic | 40.0% | |
ATGAATACGTTCTGACCAGT+CGG | - | chr6.1:71994121-71994140 | MS.gene59988:intron | 40.0% | |
CAATTGCTTTATCCGACCTA+GGG | - | chr6.1:71993512-71993531 | MS.gene59988:CDS | 40.0% | |
CAGCTTCCAAAACAAACTGA+GGG | + | chr6.1:71991800-71991819 | None:intergenic | 40.0% | |
CATCTGTTAGATACCTGCAA+TGG | + | chr6.1:71992103-71992122 | None:intergenic | 40.0% | |
CATTGCAGGTATCTAACAGA+TGG | - | chr6.1:71992101-71992120 | MS.gene59988:intron | 40.0% | |
CTAGGTCGGATAAAGCAATT+GGG | + | chr6.1:71993513-71993532 | None:intergenic | 40.0% | |
CTTTACAAAAATCGGAAGCC+CGG | - | chr6.1:71994647-71994666 | MS.gene59988:CDS | 40.0% | |
GAAACTTCCCTGACAATTGA+TGG | - | chr6.1:71992680-71992699 | MS.gene59988:intron | 40.0% | |
GAAGAGATGGATGTGACTAT+TGG | - | chr6.1:71991915-71991934 | MS.gene59988:intron | 40.0% | |
GAGAATCATACCTGATAGCA+TGG | + | chr6.1:71993185-71993204 | None:intergenic | 40.0% | |
GCCAAATTTGCACACATTGA+TGG | - | chr6.1:71993564-71993583 | MS.gene59988:CDS | 40.0% | |
GTCTATGAAAGGTTAGCAGA+TGG | + | chr6.1:71993457-71993476 | None:intergenic | 40.0% | |
GTGATAGTCTCATTAACAGC+TGG | - | chr6.1:71991471-71991490 | MS.gene59988:CDS | 40.0% | |
TAAAGCCTCACCCTACATTT+CGG | - | chr6.1:71994679-71994698 | MS.gene59988:CDS | 40.0% | |
TACAATGGTACCACTTTCAC+AGG | + | chr6.1:71992551-71992570 | None:intergenic | 40.0% | |
TAGAGACTCCAGATAAACGT+AGG | - | chr6.1:71991826-71991845 | MS.gene59988:intron | 40.0% | |
TCGTTTGAACAGTTGAACTC+AGG | + | chr6.1:71993145-71993164 | None:intergenic | 40.0% | |
TTAATGGGACATAGTTGAGC+CGG | - | chr6.1:71993253-71993272 | MS.gene59988:CDS | 40.0% | |
TTATGATTCTGCTCTGGTGT+AGG | - | chr6.1:71994041-71994060 | MS.gene59988:intron | 40.0% | |
TTATGTTGACGTAGTAGTCG+CGG | + | chr6.1:71993853-71993872 | None:intergenic | 40.0% | |
TTCTTGATGAGGCACATGAA+AGG | - | chr6.1:71992180-71992199 | MS.gene59988:CDS | 40.0% | |
TTGAAGATTGTAGTGGTGCA+AGG | - | chr6.1:71991964-71991983 | MS.gene59988:CDS | 40.0% | |
TTGTGATCCAGGCAATTTGA+TGG | + | chr6.1:71994081-71994100 | None:intergenic | 40.0% | |
TTTGCATCCATCAAATTGCC+TGG | - | chr6.1:71994071-71994090 | MS.gene59988:intron | 40.0% | |
TTTGTTTGAGAACCTTGAGC+TGG | - | chr6.1:71994237-71994256 | MS.gene59988:CDS | 40.0% | |
! | AAACAGACCTGACTTGAAGT+TGG | - | chr6.1:71992250-71992269 | MS.gene59988:CDS | 40.0% |
! | AGCCAAGACGGTAGATATTT+TGG | + | chr6.1:71994003-71994022 | None:intergenic | 40.0% |
! | ATGGATATTTTGCCAGCTCA+AGG | + | chr6.1:71994252-71994271 | None:intergenic | 40.0% |
! | TAAAGTCTGAAGCATTTCCC+TGG | + | chr6.1:71992842-71992861 | None:intergenic | 40.0% |
! | TACTGTTTTGCTTGTAGGCA+TGG | + | chr6.1:71993617-71993636 | None:intergenic | 40.0% |
! | TGTGAATGGCTTTTCAGATG+AGG | - | chr6.1:71993700-71993719 | MS.gene59988:CDS | 40.0% |
! | TTGATTCTCGTTGGTGAAAC+TGG | - | chr6.1:71991605-71991624 | MS.gene59988:intron | 40.0% |
!! | AAAGTTGAGGCATTGATGAG+AGG | + | chr6.1:71994475-71994494 | None:intergenic | 40.0% |
!! | ACAGATCCCTCAGTTTGTTT+TGG | - | chr6.1:71991791-71991810 | MS.gene59988:intron | 40.0% |
!! | CCGATCATTTGTTTTCTGAC+AGG | - | chr6.1:71994549-71994568 | MS.gene59988:CDS | 40.0% |
!! | GAGCTTTTGAAAACAGTTCG+AGG | + | chr6.1:71994285-71994304 | None:intergenic | 40.0% |
!! | GAGGCTTTATTTACGATTCC+GGG | + | chr6.1:71994668-71994687 | None:intergenic | 40.0% |
AAAGACTCAACACGAACTCG+AGG | + | chr6.1:71992755-71992774 | None:intergenic | 45.0% | |
AAAGGAAGACCCTTCCTGTT+TGG | - | chr6.1:71991537-71991556 | MS.gene59988:intron | 45.0% | |
AAGACTCAACACGAACTCGA+GGG | + | chr6.1:71992754-71992773 | None:intergenic | 45.0% | |
AATCCAGAGGCCGAAATGTA+GGG | + | chr6.1:71994692-71994711 | None:intergenic | 45.0% | |
AATCTTCTGCTGCATAGCTG+GGG | + | chr6.1:71992585-71992604 | None:intergenic | 45.0% | |
ACAACAGCTAGTGCGTATCA+TGG | - | chr6.1:71993787-71993806 | MS.gene59988:CDS | 45.0% | |
ACAAGCATCTTGGACATCTG+AGG | + | chr6.1:71993115-71993134 | None:intergenic | 45.0% | |
ACCTTCTGCTTAGCAAATCC+AGG | + | chr6.1:71992725-71992744 | None:intergenic | 45.0% | |
ACGGAAAACCTTACTCCGAA+AGG | - | chr6.1:71991495-71991514 | MS.gene59988:CDS | 45.0% | |
AGATCCTGAGAGGGATTACT+TGG | - | chr6.1:71992382-71992401 | MS.gene59988:CDS | 45.0% | |
AGCAGGATATTTCATGCAGG+TGG | - | chr6.1:71993886-71993905 | MS.gene59988:CDS | 45.0% | |
ATACTGGAGTGTGTCCAGTT+AGG | - | chr6.1:71993380-71993399 | MS.gene59988:CDS | 45.0% | |
ATATCTACCGTCTTGGCTGA+AGG | - | chr6.1:71994005-71994024 | MS.gene59988:intron | 45.0% | |
ATGCAATCCTTCAGCCAAGA+CGG | + | chr6.1:71994015-71994034 | None:intergenic | 45.0% | |
CAAGCATCTTGGACATCTGA+GGG | + | chr6.1:71993114-71993133 | None:intergenic | 45.0% | |
CACCAACGAGAATCAAAGTC+TGG | + | chr6.1:71991601-71991620 | None:intergenic | 45.0% | |
CCAATTGCTTTATCCGACCT+AGG | - | chr6.1:71993511-71993530 | MS.gene59988:CDS | 45.0% | |
CCTAGGTCGGATAAAGCAAT+TGG | + | chr6.1:71993514-71993533 | None:intergenic | 45.0% | |
CCTTCTGCTTAGCAAATCCA+GGG | + | chr6.1:71992724-71992743 | None:intergenic | 45.0% | |
CTTGACAGTGAAAGACAACC+AGG | - | chr6.1:71993934-71993953 | MS.gene59988:CDS | 45.0% | |
CTTGAGCAAGAGCAACCAAA+TGG | + | chr6.1:71994215-71994234 | None:intergenic | 45.0% | |
GAGCCGGGATTCATTTGAAA+TGG | - | chr6.1:71993269-71993288 | MS.gene59988:CDS | 45.0% | |
GATACCACAATCTTCCTTCC+AGG | + | chr6.1:71992647-71992666 | None:intergenic | 45.0% | |
GATTATGAGCGAGTTTCCGT+TGG | - | chr6.1:71993087-71993106 | MS.gene59988:CDS | 45.0% | |
GCAGCTTCCAAAACAAACTG+AGG | + | chr6.1:71991801-71991820 | None:intergenic | 45.0% | |
GCTAGCAGGATATTTCATGC+AGG | - | chr6.1:71993883-71993902 | MS.gene59988:CDS | 45.0% | |
GGGGGAAGAGTAGAATACAA+TGG | + | chr6.1:71992566-71992585 | None:intergenic | 45.0% | |
GTTGAATTACTTGGGTGCAC+TGG | - | chr6.1:71993033-71993052 | MS.gene59988:CDS | 45.0% | |
GTTGCTGATGACTACCTAAC+TGG | + | chr6.1:71993397-71993416 | None:intergenic | 45.0% | |
TAATGGGACATAGTTGAGCC+GGG | - | chr6.1:71993254-71993273 | MS.gene59988:CDS | 45.0% | |
TACCACAATCTTCCTTCCAG+GGG | + | chr6.1:71992645-71992664 | None:intergenic | 45.0% | |
TAGCAGATGGAACATGCCAA+CGG | + | chr6.1:71993444-71993463 | None:intergenic | 45.0% | |
TATGTCTCCAGCAGGTTCAA+GGG | + | chr6.1:71992441-71992460 | None:intergenic | 45.0% | |
TCGTAGTACCTTTCGGAGTA+AGG | + | chr6.1:71991506-71991525 | None:intergenic | 45.0% | |
TGACTGCTTACATGTGTGCT+CGG | - | chr6.1:71993339-71993358 | MS.gene59988:CDS | 45.0% | |
TGAGGCACATGAAAGGACTT+TGG | - | chr6.1:71992187-71992206 | MS.gene59988:CDS | 45.0% | |
TGTGCTCTTCGGTCTTCTTA+AGG | - | chr6.1:71992217-71992236 | MS.gene59988:CDS | 45.0% | |
TTCCGGGAACTTTCAGAAGA+GGG | + | chr6.1:71992331-71992350 | None:intergenic | 45.0% | |
TTGGCTACAGATGTGCTCTT+CGG | - | chr6.1:71992206-71992225 | MS.gene59988:CDS | 45.0% | |
TTTCAGATGAGGATGCGTCT+TGG | - | chr6.1:71993711-71993730 | MS.gene59988:CDS | 45.0% | |
! | AGTTGCAAATTTAGGGTCCC+AGG | - | chr6.1:71992520-71992539 | MS.gene59988:CDS | 45.0% |
! | GCTTCTGAGAGAAGCAATGA+CGG | - | chr6.1:71992127-71992146 | MS.gene59988:intron | 45.0% |
! | TCATCTTTCTGGTGCCAAAC+AGG | + | chr6.1:71991554-71991573 | None:intergenic | 45.0% |
! | TTTCTGGTGCCAAACAGGAA+GGG | + | chr6.1:71991549-71991568 | None:intergenic | 45.0% |
!! | TGGTAGTGGCAAAACTACAC+AGG | - | chr6.1:71991625-71991644 | MS.gene59988:intron | 45.0% |
!!! | AGCAATGACGGATCCACTTT+TGG | - | chr6.1:71992139-71992158 | MS.gene59988:intron | 45.0% |
ACACGCTTCGCTTCACATTG+TGG | + | chr6.1:71994617-71994636 | None:intergenic | 50.0% | |
ACCACAATCTTCCTTCCAGG+GGG | + | chr6.1:71992644-71992663 | None:intergenic | 50.0% | |
ACGATGACTCTGCTGCTAAG+AGG | - | chr6.1:71991423-71991442 | MS.gene59988:CDS | 50.0% | |
AGAGCACGCATTAAGGTCTC+TGG | + | chr6.1:71993007-71993026 | None:intergenic | 50.0% | |
AGCACGCATTAAGGTCTCTG+GGG | + | chr6.1:71993005-71993024 | None:intergenic | 50.0% | |
AGCAGATGGAACATGCCAAC+GGG | + | chr6.1:71993443-71993462 | None:intergenic | 50.0% | |
AGCTAGTGCGTATCATGGCT+CGG | - | chr6.1:71993792-71993811 | MS.gene59988:CDS | 50.0% | |
ATCTTCTGCTGCATAGCTGG+GGG | + | chr6.1:71992584-71992603 | None:intergenic | 50.0% | |
CAATCCAGAGGCCGAAATGT+AGG | + | chr6.1:71994693-71994712 | None:intergenic | 50.0% | |
CATCCATCTCTTCAGCCACA+CGG | + | chr6.1:71991908-71991927 | None:intergenic | 50.0% | |
CGATGACTCTGCTGCTAAGA+GGG | - | chr6.1:71991424-71991443 | MS.gene59988:CDS | 50.0% | |
CTACATTTCGGCCTCTGGAT+TGG | - | chr6.1:71994691-71994710 | MS.gene59988:CDS | 50.0% | |
CTTCCGGGAACTTTCAGAAG+AGG | + | chr6.1:71992332-71992351 | None:intergenic | 50.0% | |
GAGCACGCATTAAGGTCTCT+GGG | + | chr6.1:71993006-71993025 | None:intergenic | 50.0% | |
GCTTCCAAGTAATCCCTCTC+AGG | + | chr6.1:71992389-71992408 | None:intergenic | 50.0% | |
GGATGTGACTATTGGGGAAG+AGG | - | chr6.1:71991923-71991942 | MS.gene59988:intron | 50.0% | |
GTATGTCTCCAGCAGGTTCA+AGG | + | chr6.1:71992442-71992461 | None:intergenic | 50.0% | |
GTGACTATTGGGGAAGAGGT+TGG | - | chr6.1:71991927-71991946 | MS.gene59988:intron | 50.0% | |
GTGCTGGAAGAACTCAACCA+GGG | - | chr6.1:71992822-71992841 | MS.gene59988:intron | 50.0% | |
TAGGGAGACGCAAAAAGCTG+CGG | - | chr6.1:71993530-71993549 | MS.gene59988:CDS | 50.0% | |
TCCGGGAACTTTCAGAAGAG+GGG | + | chr6.1:71992330-71992349 | None:intergenic | 50.0% | |
TCGATTACCGCCATGCTATC+AGG | - | chr6.1:71993172-71993191 | MS.gene59988:CDS | 50.0% | |
TGATTCTGCTCTGGTGTAGG+TGG | - | chr6.1:71994044-71994063 | MS.gene59988:intron | 50.0% | |
TTGGACATCTGAGGGTCCAA+CGG | + | chr6.1:71993106-71993125 | None:intergenic | 50.0% | |
TTGGGTGCACTGGATGATGA+AGG | - | chr6.1:71993043-71993062 | MS.gene59988:CDS | 50.0% | |
! | CACTTCGAGAGCACGCATTA+AGG | + | chr6.1:71993014-71993033 | None:intergenic | 50.0% |
! | CAGACCTGACTTGAAGTTGG+TGG | - | chr6.1:71992253-71992272 | MS.gene59988:CDS | 50.0% |
! | CTCGTTGGTGAAACTGGTAG+TGG | - | chr6.1:71991611-71991630 | MS.gene59988:intron | 50.0% |
! | CTCTTCTGAAAGTTCCCGGA+AGG | - | chr6.1:71992330-71992349 | MS.gene59988:CDS | 50.0% |
! | CTTTCTGGTGCCAAACAGGA+AGG | + | chr6.1:71991550-71991569 | None:intergenic | 50.0% |
! | CTTTTTGCGTCTCCCTAGGT+CGG | + | chr6.1:71993527-71993546 | None:intergenic | 50.0% |
! | GCAAATTTAGGGTCCCAGGT+TGG | - | chr6.1:71992524-71992543 | MS.gene59988:CDS | 50.0% |
!! | CCCTGGATTTGCTAAGCAGA+AGG | - | chr6.1:71992721-71992740 | MS.gene59988:intron | 50.0% |
AATGTCTGTTTCCCGCCGTG+TGG | - | chr6.1:71991890-71991909 | MS.gene59988:intron | 55.0% | |
AGAGGCCGAAATGTAGGGTG+AGG | + | chr6.1:71994687-71994706 | None:intergenic | 55.0% | |
AGATGGAACATGCCAACGGG+GGG | + | chr6.1:71993440-71993459 | None:intergenic | 55.0% | |
AGCTCCACCTCCAGTTACAG+AGG | - | chr6.1:71992613-71992632 | MS.gene59988:intron | 55.0% | |
ATGCACTCAGCCTCGTAGAG+TGG | - | chr6.1:71991863-71991882 | MS.gene59988:intron | 55.0% | |
CACGCTATTGAAGTGGACCG+TGG | - | chr6.1:71994398-71994417 | MS.gene59988:intron | 55.0% | |
CACTTTCACAGGGCCAACCT+GGG | + | chr6.1:71992540-71992559 | None:intergenic | 55.0% | |
CAGATGGAACATGCCAACGG+GGG | + | chr6.1:71993441-71993460 | None:intergenic | 55.0% | |
CCACAATCTTCCTTCCAGGG+GGG | + | chr6.1:71992643-71992662 | None:intergenic | 55.0% | |
CCTGGATCACAAGCCCAAGT+GGG | - | chr6.1:71994089-71994108 | MS.gene59988:intron | 55.0% | |
CGTGCTGGAAGAACTCAACC+AGG | - | chr6.1:71992821-71992840 | MS.gene59988:intron | 55.0% | |
CTAGTGCACACCAGAGAGCT+GGG | - | chr6.1:71992798-71992817 | MS.gene59988:intron | 55.0% | |
GACATTGCAGCCACTCTACG+AGG | + | chr6.1:71991876-71991895 | None:intergenic | 55.0% | |
GCAGATGGAACATGCCAACG+GGG | + | chr6.1:71993442-71993461 | None:intergenic | 55.0% | |
GCTCCACCTCCAGTTACAGA+GGG | - | chr6.1:71992614-71992633 | MS.gene59988:intron | 55.0% | |
GGGAACAGAGAGGAAGAGGA+AGG | - | chr6.1:71991379-71991398 | MS.gene59988:CDS | 55.0% | |
GTTCACACCCTTGAACCTGC+TGG | - | chr6.1:71992431-71992450 | MS.gene59988:intron | 55.0% | |
TCACCCTACATTTCGGCCTC+TGG | - | chr6.1:71994686-71994705 | MS.gene59988:CDS | 55.0% | |
TCTGTAACTGGAGGTGGAGC+TGG | + | chr6.1:71992614-71992633 | None:intergenic | 55.0% | |
TGCAGGTGGCTCATCTTGAG+CGG | - | chr6.1:71993900-71993919 | MS.gene59988:CDS | 55.0% | |
! | GCAGCTTTTTGCGTCTCCCT+AGG | + | chr6.1:71993531-71993550 | None:intergenic | 55.0% |
! | GCCCCTCTTCTGAAAGTTCC+CGG | - | chr6.1:71992326-71992345 | MS.gene59988:CDS | 55.0% |
!! | ATTAAGGTCTCTGGGGCAGG+AGG | + | chr6.1:71992998-71993017 | None:intergenic | 55.0% |
!! | CGTACTGTGACGGACATACG+CGG | - | chr6.1:71994153-71994172 | MS.gene59988:CDS | 55.0% |
!! | GTACTGTGACGGACATACGC+GGG | - | chr6.1:71994154-71994173 | MS.gene59988:CDS | 55.0% |
!! | TACTGTGACGGACATACGCG+GGG | - | chr6.1:71994155-71994174 | MS.gene59988:CDS | 55.0% |
!! | TTAAGGTCTCTGGGGCAGGA+GGG | + | chr6.1:71992997-71993016 | None:intergenic | 55.0% |
AGTTCCCGGAAGGCTACACC+CGG | - | chr6.1:71992340-71992359 | MS.gene59988:CDS | 60.0% | |
CATCTCTTCAGCCACACGGC+GGG | + | chr6.1:71991904-71991923 | None:intergenic | 60.0% | |
CCACCTCCAGTTACAGAGGG+AGG | - | chr6.1:71992617-71992636 | MS.gene59988:intron | 60.0% | |
CCACTTTCACAGGGCCAACC+TGG | + | chr6.1:71992541-71992560 | None:intergenic | 60.0% | |
CCATCTCTTCAGCCACACGG+CGG | + | chr6.1:71991905-71991924 | None:intergenic | 60.0% | |
CCCACTTGGGCTTGTGATCC+AGG | + | chr6.1:71994092-71994111 | None:intergenic | 60.0% | |
CCCCCCTGGAAGGAAGATTG+TGG | - | chr6.1:71992640-71992659 | MS.gene59988:intron | 60.0% | |
CCTCCCTCTGTAACTGGAGG+TGG | + | chr6.1:71992620-71992639 | None:intergenic | 60.0% | |
GCCTGGATCACAAGCCCAAG+TGG | - | chr6.1:71994088-71994107 | MS.gene59988:intron | 60.0% | |
GCTAGTGCACACCAGAGAGC+TGG | - | chr6.1:71992797-71992816 | MS.gene59988:intron | 60.0% | |
GTGGCTCATCTTGAGCGGAC+AGG | - | chr6.1:71993905-71993924 | MS.gene59988:CDS | 60.0% | |
TTCCACCGGGTGTAGCCTTC+CGG | + | chr6.1:71992348-71992367 | None:intergenic | 60.0% | |
! | CCAGGTTGGCCCTGTGAAAG+TGG | - | chr6.1:71992538-71992557 | MS.gene59988:CDS | 60.0% |
! | TGACGGACATACGCGGGGAA+TGG | - | chr6.1:71994160-71994179 | MS.gene59988:CDS | 60.0% |
!! | CGCATTAAGGTCTCTGGGGC+AGG | + | chr6.1:71993001-71993020 | None:intergenic | 60.0% |
CCGCCGTGTGGCTGAAGAGA+TGG | - | chr6.1:71991902-71991921 | MS.gene59988:intron | 65.0% | |
GAACATGCCAACGGGGGGCA+CGG | + | chr6.1:71993435-71993454 | None:intergenic | 65.0% | |
GGGCCTCCCTCTGTAACTGG+AGG | + | chr6.1:71992623-71992642 | None:intergenic | 65.0% | |
TCCACCGGGTGTAGCCTTCC+GGG | + | chr6.1:71992347-71992366 | None:intergenic | 65.0% | |
TTCCAGCACGCCCAGCTCTC+TGG | + | chr6.1:71992811-71992830 | None:intergenic | 65.0% | |
CACCAGAGAGCTGGGCGTGC+TGG | - | chr6.1:71992806-71992825 | MS.gene59988:intron | 70.0% | |
CTGTGTTCCGTGCCCCCCGT+TGG | - | chr6.1:71993425-71993444 | MS.gene59988:CDS | 70.0% | |
GGGGGGCCTCCCTCTGTAAC+TGG | + | chr6.1:71992626-71992645 | None:intergenic | 70.0% | |
GTTACAGAGGGAGGCCCCCC+TGG | - | chr6.1:71992626-71992645 | MS.gene59988:intron | 70.0% | |
TCCCGGAAGGCTACACCCGG+TGG | - | chr6.1:71992343-71992362 | MS.gene59988:CDS | 70.0% | |
CAGAGGGAGGCCCCCCTGGA+AGG | - | chr6.1:71992630-71992649 | MS.gene59988:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 71991377 | 71994742 | 71991377 | ID=MS.gene59988 |
chr6.1 | mRNA | 71991377 | 71994742 | 71991377 | ID=MS.gene59988.t1;Parent=MS.gene59988 |
chr6.1 | exon | 71994473 | 71994742 | 71994473 | ID=MS.gene59988.t1.exon1;Parent=MS.gene59988.t1 |
chr6.1 | CDS | 71994473 | 71994742 | 71994473 | ID=cds.MS.gene59988.t1;Parent=MS.gene59988.t1 |
chr6.1 | exon | 71994122 | 71994324 | 71994122 | ID=MS.gene59988.t1.exon2;Parent=MS.gene59988.t1 |
chr6.1 | CDS | 71994122 | 71994324 | 71994122 | ID=cds.MS.gene59988.t1;Parent=MS.gene59988.t1 |
chr6.1 | exon | 71992926 | 71994010 | 71992926 | ID=MS.gene59988.t1.exon3;Parent=MS.gene59988.t1 |
chr6.1 | CDS | 71992926 | 71994010 | 71992926 | ID=cds.MS.gene59988.t1;Parent=MS.gene59988.t1 |
chr6.1 | exon | 71992486 | 71992611 | 71992486 | ID=MS.gene59988.t1.exon4;Parent=MS.gene59988.t1 |
chr6.1 | CDS | 71992486 | 71992611 | 71992486 | ID=cds.MS.gene59988.t1;Parent=MS.gene59988.t1 |
chr6.1 | exon | 71992164 | 71992402 | 71992164 | ID=MS.gene59988.t1.exon5;Parent=MS.gene59988.t1 |
chr6.1 | CDS | 71992164 | 71992402 | 71992164 | ID=cds.MS.gene59988.t1;Parent=MS.gene59988.t1 |
chr6.1 | exon | 71991938 | 71992056 | 71991938 | ID=MS.gene59988.t1.exon6;Parent=MS.gene59988.t1 |
chr6.1 | CDS | 71991938 | 71992056 | 71991938 | ID=cds.MS.gene59988.t1;Parent=MS.gene59988.t1 |
chr6.1 | exon | 71991377 | 71991548 | 71991377 | ID=MS.gene59988.t1.exon7;Parent=MS.gene59988.t1 |
chr6.1 | CDS | 71991377 | 71991548 | 71991377 | ID=cds.MS.gene59988.t1;Parent=MS.gene59988.t1 |
Gene Sequence |
Protein sequence |