Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042341.t1 | XP_003591371.1 | 93.1 | 712 | 48 | 1 | 1 | 712 | 1 | 711 | 0.00E+00 | 1341.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042341.t1 | Q9LZQ9 | 88.1 | 716 | 80 | 3 | 1 | 712 | 1 | 715 | 0.0e+00 | 1285.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042341.t1 | G7ICV1 | 93.1 | 712 | 48 | 1 | 1 | 712 | 1 | 711 | 0.0e+00 | 1341.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042341.t1 | MTR_1g086640 | 93.118 | 712 | 48 | 1 | 1 | 712 | 1 | 711 | 0.0 | 1391 |
MS.gene042341.t1 | MTR_3g052610 | 84.145 | 719 | 83 | 4 | 1 | 692 | 1 | 715 | 0.0 | 1241 |
MS.gene042341.t1 | MTR_4g485610 | 82.725 | 712 | 84 | 1 | 1 | 712 | 1 | 673 | 0.0 | 1201 |
MS.gene042341.t1 | MTR_1g023985 | 53.905 | 653 | 282 | 5 | 51 | 702 | 563 | 1197 | 0.0 | 735 |
MS.gene042341.t1 | MTR_1g114490 | 53.251 | 646 | 278 | 6 | 58 | 702 | 506 | 1128 | 0.0 | 715 |
MS.gene042341.t1 | MTR_3g023880 | 53.517 | 654 | 284 | 8 | 53 | 703 | 407 | 1043 | 0.0 | 702 |
MS.gene042341.t1 | MTR_6g061840 | 51.520 | 658 | 298 | 8 | 51 | 703 | 247 | 888 | 0.0 | 674 |
MS.gene042341.t1 | MTR_5g075310 | 49.180 | 671 | 281 | 9 | 36 | 703 | 187 | 800 | 0.0 | 635 |
MS.gene042341.t1 | MTR_2g098440 | 45.146 | 649 | 332 | 8 | 51 | 692 | 564 | 1195 | 0.0 | 603 |
MS.gene042341.t1 | MTR_3g054400 | 44.615 | 650 | 336 | 8 | 51 | 693 | 361 | 993 | 0.0 | 600 |
MS.gene042341.t1 | MTR_2g015320 | 46.327 | 667 | 315 | 9 | 51 | 692 | 46 | 694 | 0.0 | 597 |
MS.gene042341.t1 | MTR_6g061840 | 55.492 | 528 | 219 | 5 | 51 | 574 | 247 | 762 | 0.0 | 591 |
MS.gene042341.t1 | MTR_7g095080 | 42.053 | 711 | 331 | 12 | 45 | 694 | 35 | 725 | 0.0 | 550 |
MS.gene042341.t1 | MTR_8g080240 | 41.782 | 651 | 338 | 12 | 57 | 685 | 3 | 634 | 1.89e-172 | 509 |
MS.gene042341.t1 | MTR_8g080240 | 41.782 | 651 | 338 | 12 | 57 | 685 | 3 | 634 | 3.45e-172 | 511 |
MS.gene042341.t1 | MTR_8g080240 | 43.170 | 593 | 301 | 11 | 57 | 634 | 3 | 574 | 9.04e-163 | 483 |
MS.gene042341.t1 | MTR_8g041990 | 42.190 | 621 | 226 | 12 | 53 | 668 | 101 | 593 | 1.15e-149 | 451 |
MS.gene042341.t1 | MTR_6g061840 | 58.239 | 352 | 135 | 2 | 51 | 402 | 247 | 586 | 1.29e-137 | 418 |
MS.gene042341.t1 | MTR_4g094992 | 40.388 | 515 | 267 | 11 | 205 | 694 | 20 | 519 | 5.08e-123 | 378 |
MS.gene042341.t1 | MTR_8g106630 | 32.333 | 733 | 387 | 20 | 39 | 683 | 257 | 968 | 1.51e-99 | 332 |
MS.gene042341.t1 | MTR_3g014030 | 31.118 | 662 | 396 | 14 | 58 | 687 | 266 | 899 | 1.11e-91 | 314 |
MS.gene042341.t1 | MTR_3g086770 | 31.959 | 679 | 402 | 19 | 41 | 687 | 249 | 899 | 2.02e-88 | 305 |
MS.gene042341.t1 | MTR_0267s0070 | 31.376 | 647 | 376 | 16 | 78 | 687 | 939 | 1554 | 1.65e-86 | 299 |
MS.gene042341.t1 | MTR_1543s0010 | 48.375 | 277 | 136 | 2 | 296 | 572 | 5 | 274 | 4.72e-82 | 263 |
MS.gene042341.t1 | MTR_3g055020 | 42.400 | 250 | 142 | 1 | 371 | 620 | 49 | 296 | 6.04e-63 | 217 |
MS.gene042341.t1 | MTR_4g023590 | 42.279 | 272 | 130 | 4 | 50 | 294 | 264 | 535 | 4.07e-59 | 218 |
MS.gene042341.t1 | MTR_4g023590 | 27.083 | 480 | 252 | 9 | 298 | 686 | 684 | 1156 | 4.62e-38 | 153 |
MS.gene042341.t1 | MTR_1g109170 | 33.097 | 423 | 250 | 11 | 273 | 677 | 608 | 1015 | 1.89e-56 | 209 |
MS.gene042341.t1 | MTR_1g109170 | 44.601 | 213 | 113 | 3 | 38 | 250 | 312 | 519 | 4.03e-47 | 181 |
MS.gene042341.t1 | MTR_1g109170 | 33.097 | 423 | 250 | 11 | 273 | 677 | 608 | 1015 | 2.36e-56 | 209 |
MS.gene042341.t1 | MTR_1g109170 | 44.601 | 213 | 113 | 3 | 38 | 250 | 312 | 519 | 4.42e-47 | 181 |
MS.gene042341.t1 | MTR_1g056490 | 36.215 | 428 | 239 | 14 | 270 | 677 | 503 | 916 | 3.10e-55 | 205 |
MS.gene042341.t1 | MTR_1g056490 | 43.939 | 198 | 105 | 2 | 55 | 250 | 228 | 421 | 4.91e-42 | 165 |
MS.gene042341.t1 | MTR_8g044260 | 32.791 | 430 | 261 | 10 | 270 | 683 | 526 | 943 | 1.27e-52 | 197 |
MS.gene042341.t1 | MTR_8g044260 | 42.991 | 214 | 115 | 3 | 38 | 250 | 232 | 439 | 5.25e-41 | 162 |
MS.gene042341.t1 | MTR_8g045110 | 31.991 | 422 | 257 | 14 | 270 | 677 | 113 | 518 | 1.55e-51 | 190 |
MS.gene042341.t1 | MTR_1g088590 | 31.466 | 464 | 245 | 15 | 58 | 474 | 30 | 467 | 1.79e-46 | 179 |
MS.gene042341.t1 | MTR_4g134790 | 30.591 | 474 | 247 | 15 | 273 | 677 | 906 | 1366 | 7.24e-45 | 174 |
MS.gene042341.t1 | MTR_4g134790 | 39.070 | 215 | 120 | 3 | 45 | 250 | 592 | 804 | 2.17e-37 | 151 |
MS.gene042341.t1 | MTR_4g134790 | 30.591 | 474 | 247 | 15 | 273 | 677 | 909 | 1369 | 7.52e-45 | 174 |
MS.gene042341.t1 | MTR_4g134790 | 39.070 | 215 | 120 | 3 | 45 | 250 | 592 | 804 | 2.15e-37 | 151 |
MS.gene042341.t1 | MTR_5g090430 | 32.368 | 380 | 232 | 9 | 263 | 628 | 544 | 912 | 2.24e-43 | 169 |
MS.gene042341.t1 | MTR_5g090430 | 37.198 | 207 | 115 | 3 | 55 | 250 | 184 | 386 | 2.44e-36 | 147 |
MS.gene042341.t1 | MTR_5g090430 | 32.632 | 380 | 231 | 9 | 263 | 628 | 431 | 799 | 2.40e-43 | 169 |
MS.gene042341.t1 | MTR_5g090430 | 37.198 | 207 | 115 | 3 | 55 | 250 | 71 | 273 | 2.32e-36 | 147 |
MS.gene042341.t1 | MTR_4g120070 | 27.140 | 479 | 252 | 9 | 298 | 686 | 610 | 1081 | 1.34e-37 | 152 |
MS.gene042341.t1 | MTR_4g120070 | 35.685 | 241 | 98 | 4 | 111 | 294 | 221 | 461 | 5.42e-36 | 147 |
MS.gene042341.t1 | MTR_3g054420 | 35.789 | 95 | 51 | 1 | 498 | 592 | 1 | 85 | 1.13e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042341.t1 | AT3G62310 | 88.128 | 716 | 80 | 3 | 1 | 712 | 1 | 715 | 0.0 | 1328 |
MS.gene042341.t1 | AT2G47250 | 85.814 | 719 | 95 | 2 | 1 | 712 | 1 | 719 | 0.0 | 1298 |
MS.gene042341.t1 | AT3G62310 | 88.168 | 524 | 57 | 3 | 1 | 520 | 1 | 523 | 0.0 | 949 |
MS.gene042341.t1 | AT3G62310 | 87.547 | 530 | 60 | 4 | 1 | 525 | 1 | 529 | 0.0 | 947 |
MS.gene042341.t1 | AT3G26560 | 53.905 | 653 | 282 | 5 | 51 | 702 | 508 | 1142 | 0.0 | 729 |
MS.gene042341.t1 | AT1G32490 | 52.352 | 659 | 294 | 9 | 50 | 705 | 386 | 1027 | 0.0 | 712 |
MS.gene042341.t1 | AT1G32490 | 52.352 | 659 | 294 | 9 | 50 | 705 | 396 | 1037 | 0.0 | 711 |
MS.gene042341.t1 | AT2G35340 | 51.511 | 662 | 299 | 9 | 48 | 705 | 394 | 1037 | 0.0 | 701 |
MS.gene042341.t1 | AT2G35340 | 51.511 | 662 | 299 | 9 | 48 | 705 | 256 | 899 | 0.0 | 700 |
MS.gene042341.t1 | AT4G16680 | 50.830 | 663 | 295 | 9 | 53 | 707 | 130 | 769 | 0.0 | 669 |
MS.gene042341.t1 | AT5G13010 | 45.482 | 653 | 328 | 8 | 51 | 694 | 551 | 1184 | 0.0 | 615 |
MS.gene042341.t1 | AT4G18465 | 46.096 | 666 | 321 | 9 | 48 | 691 | 38 | 687 | 0.0 | 590 |
MS.gene042341.t1 | AT1G26370 | 42.150 | 707 | 330 | 11 | 43 | 690 | 27 | 713 | 0.0 | 538 |
MS.gene042341.t1 | AT1G27900 | 41.077 | 650 | 347 | 11 | 58 | 685 | 4 | 639 | 8.74e-172 | 510 |
MS.gene042341.t1 | AT4G16680 | 57.576 | 429 | 165 | 4 | 53 | 481 | 210 | 621 | 6.62e-165 | 491 |
MS.gene042341.t1 | AT5G14900 | 76.655 | 287 | 64 | 2 | 429 | 712 | 2 | 288 | 3.69e-161 | 468 |
MS.gene042341.t1 | AT1G27900 | 43.352 | 549 | 287 | 8 | 58 | 596 | 4 | 538 | 9.29e-160 | 473 |
MS.gene042341.t1 | AT1G27900 | 43.219 | 553 | 290 | 8 | 58 | 600 | 4 | 542 | 1.18e-159 | 474 |
MS.gene042341.t1 | AT5G10370 | 32.481 | 665 | 389 | 16 | 58 | 689 | 306 | 943 | 6.10e-95 | 324 |
MS.gene042341.t1 | AT4G01020 | 32.485 | 668 | 385 | 17 | 58 | 689 | 303 | 940 | 1.42e-92 | 317 |
MS.gene042341.t1 | AT2G35920 | 35.601 | 441 | 252 | 13 | 254 | 677 | 430 | 855 | 1.58e-63 | 229 |
MS.gene042341.t1 | AT2G35920 | 42.929 | 198 | 107 | 2 | 55 | 250 | 167 | 360 | 1.14e-42 | 167 |
MS.gene042341.t1 | AT2G35920 | 35.601 | 441 | 252 | 13 | 254 | 677 | 488 | 913 | 2.57e-63 | 229 |
MS.gene042341.t1 | AT2G35920 | 42.929 | 198 | 107 | 2 | 55 | 250 | 225 | 418 | 1.48e-42 | 167 |
MS.gene042341.t1 | AT2G35920 | 35.601 | 441 | 252 | 13 | 254 | 677 | 520 | 945 | 2.73e-63 | 229 |
MS.gene042341.t1 | AT2G35920 | 42.929 | 198 | 107 | 2 | 55 | 250 | 257 | 450 | 1.47e-42 | 167 |
MS.gene042341.t1 | AT2G01130 | 31.604 | 424 | 257 | 11 | 270 | 675 | 431 | 839 | 3.34e-55 | 205 |
MS.gene042341.t1 | AT2G01130 | 43.396 | 212 | 115 | 3 | 39 | 250 | 139 | 345 | 1.51e-44 | 173 |
MS.gene042341.t1 | AT2G01130 | 31.604 | 424 | 257 | 11 | 270 | 675 | 496 | 904 | 5.78e-55 | 205 |
MS.gene042341.t1 | AT2G01130 | 43.396 | 212 | 115 | 3 | 39 | 250 | 204 | 410 | 1.76e-44 | 173 |
MS.gene042341.t1 | AT1G33390 | 39.510 | 286 | 145 | 3 | 47 | 304 | 230 | 515 | 2.65e-53 | 200 |
MS.gene042341.t1 | AT1G33390 | 30.889 | 450 | 232 | 10 | 304 | 686 | 645 | 1082 | 8.35e-52 | 195 |
MS.gene042341.t1 | AT1G33390 | 39.510 | 286 | 145 | 3 | 47 | 304 | 230 | 515 | 2.65e-53 | 200 |
MS.gene042341.t1 | AT1G33390 | 30.889 | 450 | 232 | 10 | 304 | 686 | 645 | 1082 | 8.35e-52 | 195 |
MS.gene042341.t1 | AT1G48650 | 31.365 | 491 | 295 | 13 | 204 | 677 | 521 | 986 | 7.55e-53 | 199 |
MS.gene042341.t1 | AT1G48650 | 43.891 | 221 | 115 | 4 | 39 | 259 | 283 | 494 | 3.18e-47 | 181 |
MS.gene042341.t1 | AT1G48650 | 31.365 | 491 | 295 | 13 | 204 | 677 | 521 | 986 | 7.97e-53 | 198 |
MS.gene042341.t1 | AT1G48650 | 43.891 | 221 | 115 | 4 | 39 | 259 | 283 | 494 | 2.96e-47 | 181 |
MS.gene042341.t1 | AT5G04895 | 32.941 | 425 | 255 | 12 | 270 | 677 | 537 | 948 | 1.02e-47 | 183 |
MS.gene042341.t1 | AT5G04895 | 43.458 | 214 | 114 | 3 | 38 | 250 | 243 | 450 | 7.67e-46 | 177 |
MS.gene042341.t1 | AT1G58060 | 29.424 | 469 | 254 | 13 | 273 | 675 | 916 | 1373 | 5.17e-45 | 175 |
MS.gene042341.t1 | AT1G58060 | 37.247 | 247 | 129 | 5 | 25 | 250 | 573 | 814 | 5.78e-38 | 153 |
MS.gene042341.t1 | AT1G58050 | 32.659 | 346 | 203 | 9 | 273 | 597 | 883 | 1219 | 9.88e-43 | 168 |
MS.gene042341.t1 | AT1G58050 | 35.714 | 252 | 140 | 6 | 12 | 250 | 552 | 794 | 5.83e-37 | 150 |
MS.gene042341.t1 | AT2G30800 | 32.527 | 372 | 222 | 10 | 273 | 628 | 552 | 910 | 2.33e-42 | 166 |
MS.gene042341.t1 | AT2G30800 | 39.706 | 204 | 117 | 2 | 50 | 250 | 179 | 379 | 1.05e-41 | 164 |
MS.gene042341.t1 | AT2G30800 | 32.527 | 372 | 222 | 10 | 273 | 628 | 209 | 567 | 2.35e-42 | 166 |
MS.gene042341.t1 | AT1G06670 | 38.942 | 208 | 121 | 2 | 46 | 250 | 205 | 409 | 5.96e-41 | 162 |
MS.gene042341.t1 | AT1G06670 | 33.131 | 329 | 195 | 8 | 273 | 588 | 576 | 892 | 1.84e-38 | 154 |
MS.gene042341.t1 | AT1G06670 | 38.942 | 208 | 121 | 2 | 46 | 250 | 205 | 409 | 6.70e-41 | 162 |
MS.gene042341.t1 | AT1G06670 | 33.131 | 329 | 195 | 8 | 273 | 588 | 576 | 892 | 3.25e-38 | 154 |
MS.gene042341.t1 | AT2G47680 | 28.986 | 414 | 244 | 10 | 57 | 438 | 25 | 420 | 5.17e-37 | 149 |
Find 187 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAAGAAGTTGCAAATTT+AGG | 0.084274 | 6.2:-79426449 | MS.gene042341:CDS |
TCCATCAATGTGTGCAAATT+TGG | 0.136562 | 6.2:+79425396 | None:intergenic |
CCTGTAAGAATTCATCTTTC+TGG | 0.146253 | 6.2:+79427401 | None:intergenic |
CCAAAGGTACTACGAAATTT+TGG | 0.207545 | 6.2:-79427452 | MS.gene042341:CDS |
ACGACAACTTCGTTAATAAT+AGG | 0.221173 | 6.2:-79425221 | MS.gene042341:CDS |
TTAAAGAAGTTGCAAATTTA+GGG | 0.248355 | 6.2:-79426448 | MS.gene042341:CDS |
CCAGAAAGATGAATTCTTAC+AGG | 0.249323 | 6.2:-79427401 | MS.gene042341:CDS |
AGATTAGATCTCAGAATTTC+AGG | 0.250457 | 6.2:+79426056 | None:intergenic |
ATCATCTTCCTACGTTTATC+TGG | 0.260360 | 6.2:+79427137 | None:intergenic |
CCAAAATTTCGTAGTACCTT+TGG | 0.266974 | 6.2:+79427452 | None:intergenic |
TTCCACCGGGTGTAGCCTTC+CGG | 0.286224 | 6.2:+79426616 | None:intergenic |
AGTTCTTACATTGAAGAAAC+TGG | 0.293038 | 6.2:-79426024 | MS.gene042341:CDS |
GCCAAATTTGCACACATTGA+TGG | 0.293058 | 6.2:-79425397 | MS.gene042341:CDS |
TGCTATTAATACAGTGTTGC+AGG | 0.293596 | 6.2:-79426552 | MS.gene042341:CDS |
TGAGGCTTTATTTACGATTC+CGG | 0.297449 | 6.2:+79424293 | None:intergenic |
AGCAATGACGGATCCACTTT+TGG | 0.303630 | 6.2:-79426822 | MS.gene042341:CDS |
CACTTGAAGCTGAAAAGTTT+CGG | 0.315307 | 6.2:-79426673 | MS.gene042341:CDS |
ACTTGAAGCTGAAAAGTTTC+GGG | 0.333059 | 6.2:-79426672 | MS.gene042341:CDS |
ACAGATCCCTCAGTTTGTTT+TGG | 0.333268 | 6.2:-79427180 | MS.gene042341:intron |
CAAAATTTCGTAGTACCTTT+GGG | 0.335815 | 6.2:+79427453 | None:intergenic |
TCGATTACCGCCATGCTATC+AGG | 0.341614 | 6.2:-79425789 | MS.gene042341:intron |
AAAATCTTCTGCTGCATAGC+TGG | 0.357946 | 6.2:+79426377 | None:intergenic |
GATACCACAATCTTCCTTCC+AGG | 0.358259 | 6.2:+79426317 | None:intergenic |
TAAAGCCTCACCTTACATTT+CGG | 0.358502 | 6.2:-79424280 | MS.gene042341:CDS |
TTGATTCTCGTTGGTGAAAC+TGG | 0.361552 | 6.2:-79427358 | MS.gene042341:CDS |
CCCACTTGGGCTTGTGATCC+AGG | 0.362438 | 6.2:+79424870 | None:intergenic |
TCACCTTACATTTCGGCCTC+TGG | 0.371189 | 6.2:-79424273 | MS.gene042341:CDS |
AGTTCGTGTTGAGTCTTTGT+TGG | 0.372594 | 6.2:-79426204 | MS.gene042341:CDS |
TTCCAGCACGCCCAGCTCTC+TGG | 0.381460 | 6.2:+79426153 | None:intergenic |
CCTAGGTCGGATAAAGCAAT+TGG | 0.382504 | 6.2:+79425450 | None:intergenic |
TGATGGGAACAGAGAGGAAG+AGG | 0.387971 | 6.2:-79427588 | MS.gene042341:CDS |
TCGTAGTACCTTTGGGAGTA+AGG | 0.390309 | 6.2:+79427460 | None:intergenic |
AGAGCACGCATTAAGGTCTC+TGG | 0.392130 | 6.2:+79425957 | None:intergenic |
GCCCCTCTTCTGAAAGTTCC+CGG | 0.395668 | 6.2:-79426635 | MS.gene042341:CDS |
CACCAGAGAGCTGGGCGTGC+TGG | 0.396501 | 6.2:-79426155 | MS.gene042341:CDS |
CACTTCGAGAGCACGCATTA+AGG | 0.396663 | 6.2:+79425950 | None:intergenic |
CCTCCCTCTGTAACTGGAGG+TGG | 0.399259 | 6.2:+79426344 | None:intergenic |
AAGAGATGGATGTGACTATT+GGG | 0.402137 | 6.2:-79427055 | MS.gene042341:CDS |
AAAGGAAGACCCTTCCTGTT+TGG | 0.404959 | 6.2:-79427426 | MS.gene042341:CDS |
GAGGCTTTATTTACGATTCC+GGG | 0.405853 | 6.2:+79424294 | None:intergenic |
CGCATTAAGGTCTCTGGGGC+AGG | 0.409505 | 6.2:+79425963 | None:intergenic |
GAAACTTCCCTGACAATTGA+TGG | 0.410915 | 6.2:-79426281 | MS.gene042341:CDS |
TCCACCGGGTGTAGCCTTCC+GGG | 0.411505 | 6.2:+79426617 | None:intergenic |
TCATCTTTCTGGTGCCAAAC+AGG | 0.415049 | 6.2:+79427412 | None:intergenic |
CCACTTTCACAGGGCCAACC+TGG | 0.416008 | 6.2:+79426423 | None:intergenic |
ATATTACGATGTCAACTTGC+AGG | 0.417876 | 6.2:+79424228 | None:intergenic |
CGACAACTTCGTTAATAATA+GGG | 0.421091 | 6.2:-79425220 | MS.gene042341:CDS |
TCTCGAAGTGTTGAATTACT+TGG | 0.421382 | 6.2:-79425937 | MS.gene042341:CDS |
TCTGTAACTGGAGGTGGAGC+TGG | 0.426881 | 6.2:+79426350 | None:intergenic |
ACCTTCTGCTTAGCAAATCC+AGG | 0.431583 | 6.2:+79426239 | None:intergenic |
AGACTATACCATCAATTGTC+AGG | 0.434341 | 6.2:+79426273 | None:intergenic |
TTACATTTCGGCCTCTGGAT+TGG | 0.434585 | 6.2:-79424268 | MS.gene042341:CDS |
GAAGAGATGGATGTGACTAT+TGG | 0.440619 | 6.2:-79427056 | MS.gene042341:CDS |
AGATCCTGAGAGGGATTACT+TGG | 0.448017 | 6.2:-79426579 | MS.gene042341:CDS |
CACCAACGAGAATCAAAGTC+TGG | 0.452169 | 6.2:+79427365 | None:intergenic |
ACTTTGTATCGTTCCAAAAG+TGG | 0.463078 | 6.2:+79426809 | None:intergenic |
GTATGTCTCCAGCAGGTTCA+AGG | 0.465031 | 6.2:+79426522 | None:intergenic |
CTTCAATGTAAGAACTGTGT+TGG | 0.466640 | 6.2:+79426031 | None:intergenic |
TTTGCATCCATCAAATTGCC+TGG | 0.471358 | 6.2:-79424888 | MS.gene042341:CDS |
GCTAGTGCACACCAGAGAGC+TGG | 0.472382 | 6.2:-79426164 | MS.gene042341:CDS |
GTGACTATTGGGGAAGAGGT+TGG | 0.473162 | 6.2:-79427044 | MS.gene042341:CDS |
AAATCTTCTGCTGCATAGCT+GGG | 0.474547 | 6.2:+79426378 | None:intergenic |
AATCCAGAGGCCGAAATGTA+AGG | 0.479191 | 6.2:+79424270 | None:intergenic |
AGGACTAACAACAAGCATCT+TGG | 0.482741 | 6.2:+79425839 | None:intergenic |
TACAATGGTACCACTTTCAC+AGG | 0.484224 | 6.2:+79426413 | None:intergenic |
TTGGCTACAGATGTGCTCTT+CGG | 0.485260 | 6.2:-79426755 | MS.gene042341:CDS |
TTGTGATCCAGGCAATTTGA+TGG | 0.486167 | 6.2:+79424881 | None:intergenic |
AGTTGCAAATTTAGGGTCCC+AGG | 0.487778 | 6.2:-79426441 | MS.gene042341:CDS |
CCAGGTTGGCCCTGTGAAAG+TGG | 0.495963 | 6.2:-79426423 | MS.gene042341:CDS |
ATAAGAAAGGCAATGCTAGC+AGG | 0.500431 | 6.2:-79425090 | MS.gene042341:CDS |
GTTGAATTACTTGGGTGCAC+TGG | 0.506759 | 6.2:-79425928 | MS.gene042341:CDS |
AACCAGACTTTGATTCTCGT+TGG | 0.507479 | 6.2:-79427367 | MS.gene042341:CDS |
CGATGACTCTGCTGCTAAGA+GGG | 0.514499 | 6.2:-79427539 | MS.gene042341:CDS |
CCCTGGATTTGCTAAGCAGA+AGG | 0.521435 | 6.2:-79426240 | MS.gene042341:CDS |
GCTTCCAAGTAATCCCTCTC+AGG | 0.524150 | 6.2:+79426575 | None:intergenic |
GGGAACAGAGAGGAAGAGGA+AGG | 0.525724 | 6.2:-79427584 | MS.gene042341:CDS |
ATAGTCTATGTTATTGACCC+TGG | 0.526353 | 6.2:-79426257 | MS.gene042341:CDS |
TTCCGGGAACTTTCAGAAGA+GGG | 0.526449 | 6.2:+79426633 | None:intergenic |
CTCGAAGTGTTGAATTACTT+GGG | 0.527081 | 6.2:-79425936 | MS.gene042341:CDS |
TGAGGCACATGAAAGGACTT+TGG | 0.527365 | 6.2:-79426774 | MS.gene042341:CDS |
TTCATTGTAGATAACCCACT+TGG | 0.528625 | 6.2:+79424856 | None:intergenic |
GGATGTGACTATTGGGGAAG+AGG | 0.533162 | 6.2:-79427048 | MS.gene042341:CDS |
ATAACCACCAACTTCAAGTC+GGG | 0.533382 | 6.2:+79426704 | None:intergenic |
TGACGGACATACGCGGGGAA+TGG | 0.533415 | 6.2:-79424799 | MS.gene042341:intron |
CCGCCGTGTGGCTGAAGAGA+TGG | 0.533749 | 6.2:-79427069 | MS.gene042341:CDS |
GTTCACACCCTTGAACCTGC+TGG | 0.534655 | 6.2:-79426530 | MS.gene042341:CDS |
ATTAAGGTCTCTGGGGCAGG+AGG | 0.534663 | 6.2:+79425966 | None:intergenic |
CAATTGCTTTATCCGACCTA+GGG | 0.536273 | 6.2:-79425449 | MS.gene042341:CDS |
CACTTTCACAGGGCCAACCT+GGG | 0.538377 | 6.2:+79426424 | None:intergenic |
CTTTCTGGTGCCAAACAGGA+AGG | 0.540765 | 6.2:+79427416 | None:intergenic |
CTCGTTGGTGAAACTGGTAG+TGG | 0.542316 | 6.2:-79427352 | MS.gene042341:CDS |
GAGCACGCATTAAGGTCTCT+GGG | 0.544415 | 6.2:+79425958 | None:intergenic |
GAAGGTAACTTAACAAAGCT+CGG | 0.544524 | 6.2:-79425900 | MS.gene042341:CDS |
AACGAAGTTGTCGTAGCACC+AGG | 0.544748 | 6.2:+79425230 | None:intergenic |
CATCTCTTCAGCCACACGGC+GGG | 0.547536 | 6.2:+79427070 | None:intergenic |
CTAGTGCACACCAGAGAGCT+GGG | 0.549081 | 6.2:-79426163 | MS.gene042341:CDS |
GTGATAGTCTCATTAACAGC+TGG | 0.549151 | 6.2:-79427492 | MS.gene042341:CDS |
CTACTACGTCAACATAAGAA+AGG | 0.551235 | 6.2:-79425103 | MS.gene042341:CDS |
GTGGCTCATCTTGAGCGGAC+AGG | 0.551298 | 6.2:-79425054 | MS.gene042341:CDS |
AAACAGACCCGACTTGAAGT+TGG | 0.553030 | 6.2:-79426711 | MS.gene042341:CDS |
TTTCAGATGAGGATGCGTCC+TGG | 0.554973 | 6.2:-79425248 | MS.gene042341:intron |
CGTGCTGGAAGAACTCAACC+AGG | 0.555751 | 6.2:-79426140 | MS.gene042341:CDS |
CTAGGTCGGATAAAGCAATT+GGG | 0.557504 | 6.2:+79425451 | None:intergenic |
CAACTTCTTTAAATATTCTG+CGG | 0.557758 | 6.2:+79426459 | None:intergenic |
ACAACAGCTAGTGCGTATCA+TGG | 0.558197 | 6.2:-79425172 | MS.gene042341:CDS |
ATACCACAATCTTCCTTCCA+GGG | 0.559873 | 6.2:+79426318 | None:intergenic |
TTGAAGATTGTAGTGGTGCA+AGG | 0.562883 | 6.2:-79427007 | MS.gene042341:CDS |
AAAACAAGTATGTCTCCAGC+AGG | 0.564551 | 6.2:+79426515 | None:intergenic |
CCAATTGCTTTATCCGACCT+AGG | 0.565444 | 6.2:-79425450 | MS.gene042341:CDS |
ACACGCTTCGCTTCACATTG+TGG | 0.566257 | 6.2:+79424345 | None:intergenic |
CTTGACAGTGAAAGACAACC+AGG | 0.567630 | 6.2:-79425025 | MS.gene042341:intron |
ACGATGACTCTGCTGCTAAG+AGG | 0.567819 | 6.2:-79427540 | MS.gene042341:CDS |
TATGTCTCCAGCAGGTTCAA+GGG | 0.569169 | 6.2:+79426523 | None:intergenic |
AGTCTCATTAACAGCTGGAA+CGG | 0.573645 | 6.2:-79427487 | MS.gene042341:CDS |
GGGCCTCCCTCTGTAACTGG+AGG | 0.575165 | 6.2:+79426341 | None:intergenic |
GATTATGAGCGAGTTTCCGT+TGG | 0.577977 | 6.2:-79425874 | MS.gene042341:CDS |
CAAAGTAATTATTCTTGATG+AGG | 0.579181 | 6.2:-79426792 | MS.gene042341:CDS |
TCGTTTGAACAGTTGAACTC+AGG | 0.579830 | 6.2:+79425819 | None:intergenic |
TAAAGTCTGAAGCATTTCCC+TGG | 0.580106 | 6.2:+79426122 | None:intergenic |
ACAAGCATCTTGGACATCTG+AGG | 0.582390 | 6.2:+79425849 | None:intergenic |
CATTGCAGGTATCTAACAGA+TGG | 0.584996 | 6.2:-79426860 | MS.gene042341:intron |
GACTATACCATCAATTGTCA+GGG | 0.585147 | 6.2:+79426274 | None:intergenic |
TCCGGGAACTTTCAGAAGAG+GGG | 0.585424 | 6.2:+79426634 | None:intergenic |
CAGACCCGACTTGAAGTTGG+TGG | 0.586911 | 6.2:-79426708 | MS.gene042341:CDS |
GAGAATCATACCTGATAGCA+TGG | 0.589279 | 6.2:+79425779 | None:intergenic |
TTATACTAAAGATCCTGAGA+GGG | 0.590897 | 6.2:-79426588 | MS.gene042341:CDS |
AATCTTCTGCTGCATAGCTG+GGG | 0.591377 | 6.2:+79426379 | None:intergenic |
TGCAGGTGGCTCATCTTGAG+CGG | 0.591727 | 6.2:-79425059 | MS.gene042341:CDS |
ATGCACTCAGCCTCGTAGAG+TGG | 0.592238 | 6.2:-79427108 | MS.gene042341:CDS |
TTCTTGATGAGGCACATGAA+AGG | 0.595611 | 6.2:-79426781 | MS.gene042341:CDS |
AAAGACTCAACACGAACTCG+AGG | 0.597221 | 6.2:+79426209 | None:intergenic |
CTTCCGGGAACTTTCAGAAG+AGG | 0.600508 | 6.2:+79426632 | None:intergenic |
TTGCTTTATCCGACCTAGGG+AGG | 0.602405 | 6.2:-79425446 | MS.gene042341:CDS |
GCAAATTTAGGGTCCCAGGT+TGG | 0.604428 | 6.2:-79426437 | MS.gene042341:CDS |
CTCTTCTGAAAGTTCCCGGA+AGG | 0.605168 | 6.2:-79426631 | MS.gene042341:CDS |
GCTTCTGAGAGAAGCAATGA+CGG | 0.606633 | 6.2:-79426834 | MS.gene042341:CDS |
TTAAGGTCTCTGGGGCAGGA+GGG | 0.608444 | 6.2:+79425967 | None:intergenic |
GCCTGGATCACAAGCCCAAG+TGG | 0.608892 | 6.2:-79424871 | MS.gene042341:CDS |
ATCAGATTTGAAGATTGTAG+TGG | 0.611330 | 6.2:-79427014 | MS.gene042341:CDS |
TTGGACATCTGAGGGTCCAA+CGG | 0.612778 | 6.2:+79425858 | None:intergenic |
TTTATACTAAAGATCCTGAG+AGG | 0.616133 | 6.2:-79426589 | MS.gene042341:CDS |
GCAGCTTCCAAAACAAACTG+AGG | 0.618791 | 6.2:+79427173 | None:intergenic |
GTTCTTACATTGAAGAAACT+GGG | 0.618997 | 6.2:-79426023 | MS.gene042341:CDS |
TTTCTGGTGCCAAACAGGAA+GGG | 0.620769 | 6.2:+79427417 | None:intergenic |
ATGAATACGTTCTGACCAGT+CGG | 0.622397 | 6.2:-79424838 | MS.gene042341:CDS |
CAAGCATCTTGGACATCTGA+GGG | 0.623893 | 6.2:+79425850 | None:intergenic |
CATAACCACCAACTTCAAGT+CGG | 0.624330 | 6.2:+79426703 | None:intergenic |
CAGCTTCCAAAACAAACTGA+GGG | 0.627735 | 6.2:+79427174 | None:intergenic |
AGCTGTTAATGAGACTATCA+CGG | 0.628097 | 6.2:+79427494 | None:intergenic |
TACCACAATCTTCCTTCCAG+GGG | 0.628659 | 6.2:+79426319 | None:intergenic |
AGCTCCACCTCCAGTTACAG+AGG | 0.630152 | 6.2:-79426348 | MS.gene042341:CDS |
ACGGAAAACCTTACTCCCAA+AGG | 0.631171 | 6.2:-79427468 | MS.gene042341:CDS |
GTACTGTGACGGACATACGC+GGG | 0.632492 | 6.2:-79424805 | MS.gene042341:CDS |
CATCCATCTCTTCAGCCACA+CGG | 0.632610 | 6.2:+79427066 | None:intergenic |
ATCTTCTGCTGCATAGCTGG+GGG | 0.635596 | 6.2:+79426380 | None:intergenic |
AGTACGTATAAAATTCCGAC+TGG | 0.636105 | 6.2:+79424823 | None:intergenic |
TTAGACAAATCATAGTAATG+TGG | 0.637983 | 6.2:+79424372 | None:intergenic |
AGAGATGGATGTGACTATTG+GGG | 0.639115 | 6.2:-79427054 | MS.gene042341:CDS |
TCATTGTAGATAACCCACTT+GGG | 0.639363 | 6.2:+79424857 | None:intergenic |
AACATCAAATTCCAATCCAG+AGG | 0.642225 | 6.2:+79424257 | None:intergenic |
TTGATTTGATGGGAACAGAG+AGG | 0.647425 | 6.2:-79427594 | None:intergenic |
CCTTCTGCTTAGCAAATCCA+GGG | 0.648485 | 6.2:+79426240 | None:intergenic |
CGTACTGTGACGGACATACG+CGG | 0.649221 | 6.2:-79424806 | MS.gene042341:CDS |
AATGTCTGTTTCCCGCCGTG+TGG | 0.650873 | 6.2:-79427081 | MS.gene042341:CDS |
AGTTCCCGGAAGGCTACACC+CGG | 0.653563 | 6.2:-79426621 | MS.gene042341:CDS |
TTATGTTGACGTAGTAGTCG+CGG | 0.654635 | 6.2:+79425109 | None:intergenic |
GACATTGCAGCCACTCTACG+AGG | 0.655738 | 6.2:+79427098 | None:intergenic |
TTGGGTGCACTGGATGATGA+AGG | 0.657309 | 6.2:-79425918 | MS.gene042341:CDS |
GCTAAGAGGGCGAAAACTAA+CGG | 0.658850 | 6.2:-79427526 | MS.gene042341:CDS |
CCTGGATCACAAGCCCAAGT+GGG | 0.659222 | 6.2:-79424870 | MS.gene042341:CDS |
AGAGGCCGAAATGTAAGGTG+AGG | 0.660318 | 6.2:+79424275 | None:intergenic |
TCCCGGAAGGCTACACCCGG+TGG | 0.660405 | 6.2:-79426618 | MS.gene042341:CDS |
CCACCTCCAGTTACAGAGGG+AGG | 0.661788 | 6.2:-79426344 | MS.gene042341:CDS |
GCTCCACCTCCAGTTACAGA+GGG | 0.661909 | 6.2:-79426347 | MS.gene042341:CDS |
ACCACAATCTTCCTTCCAGG+GGG | 0.663082 | 6.2:+79426320 | None:intergenic |
AAGACTCAACACGAACTCGA+GGG | 0.667733 | 6.2:+79426210 | None:intergenic |
TGGTAGTGGCAAAACTACAC+AGG | 0.668865 | 6.2:-79427338 | MS.gene042341:intron |
AGAATTTCAGGATATGTCTG+CGG | 0.675913 | 6.2:+79426068 | None:intergenic |
TAGAGACTCCAGATAAACGT+AGG | 0.685609 | 6.2:-79427145 | MS.gene042341:CDS |
TACTGTGACGGACATACGCG+GGG | 0.694347 | 6.2:-79424804 | MS.gene042341:CDS |
CCATCTCTTCAGCCACACGG+CGG | 0.704471 | 6.2:+79427069 | None:intergenic |
AGCACGCATTAAGGTCTCTG+GGG | 0.707760 | 6.2:+79425959 | None:intergenic |
CCACAATCTTCCTTCCAGGG+GGG | 0.732599 | 6.2:+79426321 | None:intergenic |
ACAATGGTACCACTTTCACA+GGG | 0.749295 | 6.2:+79426414 | None:intergenic |
GTGCTGGAAGAACTCAACCA+GGG | 0.755525 | 6.2:-79426139 | MS.gene042341:CDS |
AAGAGGGCGAAAACTAACGG+CGG | 0.776056 | 6.2:-79427523 | MS.gene042341:CDS |
AATCATACCTGATAGCATGG+CGG | 0.798994 | 6.2:+79425782 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAATGCTTTACAAAAAT+CGG | - | chr6.2:79427505-79427524 | MS.gene042341:CDS | 15.0% |
!! | TTTAAATTGTAATATCCATT+TGG | - | chr6.2:79427063-79427082 | MS.gene042341:CDS | 15.0% |
!! | AATTACATAGAGTAATATCA+GGG | + | chr6.2:79424871-79424890 | None:intergenic | 20.0% |
!! | ACATGATATTTCAGTAATTA+AGG | + | chr6.2:79427298-79427317 | None:intergenic | 20.0% |
!! | TAATTAAGGATTATAAACCA+CGG | + | chr6.2:79427284-79427303 | None:intergenic | 20.0% |
!! | TTAAAGAAGTTGCAAATTTA+GGG | - | chr6.2:79425377-79425396 | MS.gene042341:CDS | 20.0% |
!! | TTAGTATAAAAAATTTCCAC+CGG | + | chr6.2:79425226-79425245 | None:intergenic | 20.0% |
!! | TTCTAACATAATTAACGAAA+TGG | + | chr6.2:79427212-79427231 | None:intergenic | 20.0% |
!! | TTTAAAGAAGTTGCAAATTT+AGG | - | chr6.2:79425376-79425395 | MS.gene042341:CDS | 20.0% |
!!! | ATCATTGTTGAAACTATTTT+CGG | + | chr6.2:79425731-79425750 | None:intergenic | 20.0% |
! | CAAAGTAATTATTCTTGATG+AGG | - | chr6.2:79425033-79425052 | MS.gene042341:CDS | 25.0% |
! | CAACTTCTTTAAATATTCTG+CGG | + | chr6.2:79425369-79425388 | None:intergenic | 25.0% |
! | CAATTACATAGAGTAATATC+AGG | + | chr6.2:79424872-79424891 | None:intergenic | 25.0% |
! | GAAATAGATTATCACATAAG+AGG | + | chr6.2:79426343-79426362 | None:intergenic | 25.0% |
! | GTTTATTAAATGCATGTGAA+TGG | - | chr6.2:79426552-79426571 | MS.gene042341:CDS | 25.0% |
! | TAACAAACGAATCTTAAGAT+AGG | + | chr6.2:79424559-79424578 | None:intergenic | 25.0% |
! | TAGTATAAAAAATTTCCACC+GGG | + | chr6.2:79425225-79425244 | None:intergenic | 25.0% |
! | TATCTTAAGATTCGTTTGTT+AGG | - | chr6.2:79424558-79424577 | MS.gene042341:intron | 25.0% |
! | TCCATATATTCAAAAAGTTG+AGG | + | chr6.2:79427354-79427373 | None:intergenic | 25.0% |
! | TGCATAAAAGAAAAAATGCT+GGG | + | chr6.2:79426162-79426181 | None:intergenic | 25.0% |
! | TTAGACAAATCATAGTAATG+TGG | + | chr6.2:79427456-79427475 | None:intergenic | 25.0% |
!! | ACGAAATGGTAAAAGTATAT+AGG | + | chr6.2:79427198-79427217 | None:intergenic | 25.0% |
!!! | GCACATAATTTTTGTTATAC+TGG | - | chr6.2:79426228-79426247 | MS.gene042341:CDS | 25.0% |
AATCCATTTCAAATGAATCC+CGG | + | chr6.2:79426139-79426158 | None:intergenic | 30.0% | |
AATCTATTATTTCCCATTGC+AGG | - | chr6.2:79424951-79424970 | MS.gene042341:intron | 30.0% | |
ACGACAACTTCGTTAATAAT+AGG | - | chr6.2:79426604-79426623 | MS.gene042341:CDS | 30.0% | |
AGATTAGATCTCAGAATTTC+AGG | + | chr6.2:79425772-79425791 | None:intergenic | 30.0% | |
AGTTCTTACATTGAAGAAAC+TGG | - | chr6.2:79425801-79425820 | MS.gene042341:CDS | 30.0% | |
ATCAGATTTGAAGATTGTAG+TGG | - | chr6.2:79424811-79424830 | MS.gene042341:CDS | 30.0% | |
ATGTCCCATTAAAATTACAG+TGG | + | chr6.2:79426109-79426128 | None:intergenic | 30.0% | |
ATTCGTGTAATGGTTAAACA+AGG | + | chr6.2:79427174-79427193 | None:intergenic | 30.0% | |
CAAAATTTCGTAGTACCTTT+GGG | + | chr6.2:79424375-79424394 | None:intergenic | 30.0% | |
CAATAACATCAAAAACCACA+AGG | + | chr6.2:79427381-79427400 | None:intergenic | 30.0% | |
CCTGTCAGAAAACAAATTAT+CGG | + | chr6.2:79427418-79427437 | None:intergenic | 30.0% | |
CGACAACTTCGTTAATAATA+GGG | - | chr6.2:79426605-79426624 | MS.gene042341:CDS | 30.0% | |
GCAATGGGAAATAATAGATT+GGG | + | chr6.2:79424951-79424970 | None:intergenic | 30.0% | |
GTATATAGGTATTCGTGTAA+TGG | + | chr6.2:79427184-79427203 | None:intergenic | 30.0% | |
GTGCATAAAAGAAAAAATGC+TGG | + | chr6.2:79426163-79426182 | None:intergenic | 30.0% | |
GTTCTTACATTGAAGAAACT+GGG | - | chr6.2:79425802-79425821 | MS.gene042341:CDS | 30.0% | |
TCAAATTTATGATTCTGCTC+TGG | - | chr6.2:79426901-79426920 | MS.gene042341:intron | 30.0% | |
TGCAATGGGAAATAATAGAT+TGG | + | chr6.2:79424952-79424971 | None:intergenic | 30.0% | |
TGTCCCATTAAAATTACAGT+GGG | + | chr6.2:79426108-79426127 | None:intergenic | 30.0% | |
TTATACTAAAGATCCTGAGA+GGG | - | chr6.2:79425237-79425256 | MS.gene042341:CDS | 30.0% | |
TTCGTGTAATGGTTAAACAA+GGG | + | chr6.2:79427173-79427192 | None:intergenic | 30.0% | |
TTTATACTAAAGATCCTGAG+AGG | - | chr6.2:79425236-79425255 | MS.gene042341:CDS | 30.0% | |
! | GAATTTTATACGTACTGTGA+CGG | - | chr6.2:79427009-79427028 | MS.gene042341:CDS | 30.0% |
! | GCCTCAACTTTTTGAATATA+TGG | - | chr6.2:79427350-79427369 | MS.gene042341:CDS | 30.0% |
!! | AATGATGATTTTAGCAAACC+TGG | + | chr6.2:79426821-79426840 | None:intergenic | 30.0% |
!! | ACTACGAAATTTTGGAGAAA+AGG | - | chr6.2:79424381-79424400 | MS.gene042341:CDS | 30.0% |
!! | GACATACTTGTTTTTCTTAC+TGG | - | chr6.2:79425319-79425338 | MS.gene042341:intron | 30.0% |
!! | TGAATTCTTACAGGTTTTGA+AGG | - | chr6.2:79424433-79424452 | MS.gene042341:intron | 30.0% |
!! | TGTCCCACTGTAATTTTAAT+GGG | - | chr6.2:79426102-79426121 | MS.gene042341:CDS | 30.0% |
!!! | TAATTTGTTTTCTGACAGGT+TGG | - | chr6.2:79427419-79427438 | MS.gene042341:CDS | 30.0% |
!!! | TTTAGTGCATTTTGACTTCA+TGG | - | chr6.2:79425834-79425853 | MS.gene042341:CDS | 30.0% |
AACATCAAATTCCAATCCAG+AGG | + | chr6.2:79427571-79427590 | None:intergenic | 35.0% | |
AAGAGATGGATGTGACTATT+GGG | - | chr6.2:79424770-79424789 | MS.gene042341:intron | 35.0% | |
ACTTCGAGGTATAAAACTGA+TGG | + | chr6.2:79427137-79427156 | None:intergenic | 35.0% | |
ACTTGAAGCTGAAAAGTTTC+GGG | - | chr6.2:79425153-79425172 | MS.gene042341:CDS | 35.0% | |
ACTTTGTATCGTTCCAAAAG+TGG | + | chr6.2:79425019-79425038 | None:intergenic | 35.0% | |
AGAATTTCAGGATATGTCTG+CGG | + | chr6.2:79425760-79425779 | None:intergenic | 35.0% | |
AGACTATACCATCAATTGTC+AGG | + | chr6.2:79425555-79425574 | None:intergenic | 35.0% | |
AGCTGTTAATGAGACTATCA+CGG | + | chr6.2:79424334-79424353 | None:intergenic | 35.0% | |
AGTACGTATAAAATTCCGAC+TGG | + | chr6.2:79427005-79427024 | None:intergenic | 35.0% | |
ATAGTCTATGTTATTGACCC+TGG | - | chr6.2:79425568-79425587 | MS.gene042341:intron | 35.0% | |
ATCATCTTCCTACGTTTATC+TGG | + | chr6.2:79424691-79424710 | None:intergenic | 35.0% | |
ATCTGTTAGATACCTGCAAT+GGG | + | chr6.2:79424966-79424985 | None:intergenic | 35.0% | |
CACTTGAAGCTGAAAAGTTT+CGG | - | chr6.2:79425152-79425171 | MS.gene042341:CDS | 35.0% | |
CCAAAATTTCGTAGTACCTT+TGG | + | chr6.2:79424376-79424395 | None:intergenic | 35.0% | |
CCAGAAAGATGAATTCTTAC+AGG | - | chr6.2:79424424-79424443 | MS.gene042341:intron | 35.0% | |
CCTGTAAGAATTCATCTTTC+TGG | + | chr6.2:79424427-79424446 | None:intergenic | 35.0% | |
CTACTACGTCAACATAAGAA+AGG | - | chr6.2:79426722-79426741 | MS.gene042341:CDS | 35.0% | |
CTTCAATGTAAGAACTGTGT+TGG | + | chr6.2:79425797-79425816 | None:intergenic | 35.0% | |
GAAGGTAACTTAACAAAGCT+CGG | - | chr6.2:79425925-79425944 | MS.gene042341:CDS | 35.0% | |
GAATATATGGAGTAACCTTG+TGG | - | chr6.2:79427363-79427382 | MS.gene042341:CDS | 35.0% | |
GACTATACCATCAATTGTCA+GGG | + | chr6.2:79425554-79425573 | None:intergenic | 35.0% | |
TAAAGCCTCACCTTACATTT+CGG | - | chr6.2:79427545-79427564 | MS.gene042341:CDS | 35.0% | |
TACCAAAATATCTACCGTCT+TGG | - | chr6.2:79426864-79426883 | MS.gene042341:intron | 35.0% | |
TCACATAAGAGGTCTATGAA+AGG | + | chr6.2:79426332-79426351 | None:intergenic | 35.0% | |
TCATTGTAGATAACCCACTT+GGG | + | chr6.2:79426971-79426990 | None:intergenic | 35.0% | |
TCCATCAATGTGTGCAAATT+TGG | + | chr6.2:79426432-79426451 | None:intergenic | 35.0% | |
TGCTATTAATACAGTGTTGC+AGG | - | chr6.2:79425273-79425292 | MS.gene042341:intron | 35.0% | |
TTATGCACAGACATATGACA+GGG | - | chr6.2:79426175-79426194 | MS.gene042341:CDS | 35.0% | |
TTCATTGTAGATAACCCACT+TGG | + | chr6.2:79426972-79426991 | None:intergenic | 35.0% | |
TTTATGCACAGACATATGAC+AGG | - | chr6.2:79426174-79426193 | MS.gene042341:CDS | 35.0% | |
! | GTGTCCCACTGTAATTTTAA+TGG | - | chr6.2:79426101-79426120 | MS.gene042341:CDS | 35.0% |
! | TCACTTACTGTTTTGCTTGT+AGG | + | chr6.2:79426486-79426505 | None:intergenic | 35.0% |
!! | ACTTGTTTTTCTTACTGGAG+AGG | - | chr6.2:79425324-79425343 | MS.gene042341:intron | 35.0% |
!! | CTCGAAGTGTTGAATTACTT+GGG | - | chr6.2:79425889-79425908 | MS.gene042341:CDS | 35.0% |
!! | TCTCGAAGTGTTGAATTACT+TGG | - | chr6.2:79425888-79425907 | MS.gene042341:CDS | 35.0% |
!! | TGAGGCTTTATTTACGATTC+CGG | + | chr6.2:79427535-79427554 | None:intergenic | 35.0% |
!!! | AAGTTTCGGGCCTATTTTTT+TGG | - | chr6.2:79425166-79425185 | MS.gene042341:CDS | 35.0% |
!!! | CCAAAGGTACTACGAAATTT+TGG | - | chr6.2:79424373-79424392 | MS.gene042341:CDS | 35.0% |
!!! | CCGATAATTTGTTTTCTGAC+AGG | - | chr6.2:79427415-79427434 | MS.gene042341:CDS | 35.0% |
!!! | TGTGCACTAGCTTTTGATAT+TGG | + | chr6.2:79425652-79425671 | None:intergenic | 35.0% |
AAAACAAGTATGTCTCCAGC+AGG | + | chr6.2:79425313-79425332 | None:intergenic | 40.0% | |
AAAATCTTCTGCTGCATAGC+TGG | + | chr6.2:79425451-79425470 | None:intergenic | 40.0% | |
AAAGCTTCACGCTATTGAAG+TGG | - | chr6.2:79427257-79427276 | MS.gene042341:intron | 40.0% | |
AAATCTTCTGCTGCATAGCT+GGG | + | chr6.2:79425450-79425469 | None:intergenic | 40.0% | |
AACCAGACTTTGATTCTCGT+TGG | - | chr6.2:79424458-79424477 | MS.gene042341:intron | 40.0% | |
AAGAGGGGCTCCAAAAAAAT+AGG | + | chr6.2:79425179-79425198 | None:intergenic | 40.0% | |
AATCATACCTGATAGCATGG+CGG | + | chr6.2:79426046-79426065 | None:intergenic | 40.0% | |
ACAATGGTACCACTTTCACA+GGG | + | chr6.2:79425414-79425433 | None:intergenic | 40.0% | |
AGAGATGGATGTGACTATTG+GGG | - | chr6.2:79424771-79424790 | MS.gene042341:intron | 40.0% | |
AGGACTAACAACAAGCATCT+TGG | + | chr6.2:79425989-79426008 | None:intergenic | 40.0% | |
AGTCTCATTAACAGCTGGAA+CGG | - | chr6.2:79424338-79424357 | MS.gene042341:CDS | 40.0% | |
AGTTCGTGTTGAGTCTTTGT+TGG | - | chr6.2:79425621-79425640 | MS.gene042341:intron | 40.0% | |
ATAACCACCAACTTCAAGTC+GGG | + | chr6.2:79425124-79425143 | None:intergenic | 40.0% | |
ATAAGAAAGGCAATGCTAGC+AGG | - | chr6.2:79426735-79426754 | MS.gene042341:CDS | 40.0% | |
ATACCACAATCTTCCTTCCA+GGG | + | chr6.2:79425510-79425529 | None:intergenic | 40.0% | |
ATGAATACGTTCTGACCAGT+CGG | - | chr6.2:79426987-79427006 | MS.gene042341:intron | 40.0% | |
CAATTGCTTTATCCGACCTA+GGG | - | chr6.2:79426376-79426395 | MS.gene042341:CDS | 40.0% | |
CAGCTTCCAAAACAAACTGA+GGG | + | chr6.2:79424654-79424673 | None:intergenic | 40.0% | |
CATAACCACCAACTTCAAGT+CGG | + | chr6.2:79425125-79425144 | None:intergenic | 40.0% | |
CATCTGTTAGATACCTGCAA+TGG | + | chr6.2:79424967-79424986 | None:intergenic | 40.0% | |
CATTGCAGGTATCTAACAGA+TGG | - | chr6.2:79424965-79424984 | MS.gene042341:intron | 40.0% | |
CTAGGTCGGATAAAGCAATT+GGG | + | chr6.2:79426377-79426396 | None:intergenic | 40.0% | |
CTTAAGCAAGAGCAACCAAA+TGG | + | chr6.2:79427081-79427100 | None:intergenic | 40.0% | |
CTTTACAAAAATCGGAAGCC+CGG | - | chr6.2:79427513-79427532 | MS.gene042341:CDS | 40.0% | |
GAAACTTCCCTGACAATTGA+TGG | - | chr6.2:79425544-79425563 | MS.gene042341:intron | 40.0% | |
GAAGAGATGGATGTGACTAT+TGG | - | chr6.2:79424769-79424788 | MS.gene042341:intron | 40.0% | |
GAGAATCATACCTGATAGCA+TGG | + | chr6.2:79426049-79426068 | None:intergenic | 40.0% | |
GCCAAATTTGCACACATTGA+TGG | - | chr6.2:79426428-79426447 | MS.gene042341:CDS | 40.0% | |
GTCTATGAAAGGTTAGCAGA+TGG | + | chr6.2:79426321-79426340 | None:intergenic | 40.0% | |
GTGATAGTCTCATTAACAGC+TGG | - | chr6.2:79424333-79424352 | MS.gene042341:CDS | 40.0% | |
TACAATGGTACCACTTTCAC+AGG | + | chr6.2:79425415-79425434 | None:intergenic | 40.0% | |
TAGAGACTCCAGATAAACGT+AGG | - | chr6.2:79424680-79424699 | MS.gene042341:intron | 40.0% | |
TCGTTTGAACAGTTGAACTC+AGG | + | chr6.2:79426009-79426028 | None:intergenic | 40.0% | |
TTAATGGGACATAGTTGAGC+CGG | - | chr6.2:79426117-79426136 | MS.gene042341:CDS | 40.0% | |
TTATGATTCTGCTCTGGTGT+AGG | - | chr6.2:79426907-79426926 | MS.gene042341:intron | 40.0% | |
TTATGTTGACGTAGTAGTCG+CGG | + | chr6.2:79426719-79426738 | None:intergenic | 40.0% | |
TTCTTGATGAGGCACATGAA+AGG | - | chr6.2:79425044-79425063 | MS.gene042341:CDS | 40.0% | |
TTGAAGATTGTAGTGGTGCA+AGG | - | chr6.2:79424818-79424837 | MS.gene042341:CDS | 40.0% | |
TTGTGATCCAGGCAATTTGA+TGG | + | chr6.2:79426947-79426966 | None:intergenic | 40.0% | |
TTTGCATCCATCAAATTGCC+TGG | - | chr6.2:79426937-79426956 | MS.gene042341:intron | 40.0% | |
TTTGTTTGAGAACCTTGAGC+TGG | - | chr6.2:79427103-79427122 | MS.gene042341:CDS | 40.0% | |
! | AGCAGGATATTTTATGCAGG+TGG | - | chr6.2:79426752-79426771 | MS.gene042341:CDS | 40.0% |
! | AGCCAAGACGGTAGATATTT+TGG | + | chr6.2:79426869-79426888 | None:intergenic | 40.0% |
! | ATGGATATTTTGCCAGCTCA+AGG | + | chr6.2:79427118-79427137 | None:intergenic | 40.0% |
! | GCTAGCAGGATATTTTATGC+AGG | - | chr6.2:79426749-79426768 | MS.gene042341:CDS | 40.0% |
! | TAAAGTCTGAAGCATTTCCC+TGG | + | chr6.2:79425706-79425725 | None:intergenic | 40.0% |
! | TACTGTTTTGCTTGTAGGCA+TGG | + | chr6.2:79426481-79426500 | None:intergenic | 40.0% |
! | TGTGAATGGCTTTTCAGATG+AGG | - | chr6.2:79426566-79426585 | MS.gene042341:CDS | 40.0% |
! | TTGATTCTCGTTGGTGAAAC+TGG | - | chr6.2:79424467-79424486 | MS.gene042341:intron | 40.0% |
!! | AAAGTTGAGGCATTGATGAG+AGG | + | chr6.2:79427341-79427360 | None:intergenic | 40.0% |
!! | ACAGATCCCTCAGTTTGTTT+TGG | - | chr6.2:79424645-79424664 | MS.gene042341:intron | 40.0% |
!! | ACAGGTTAGTTTCTGTCTCT+TGG | - | chr6.2:79424505-79424524 | MS.gene042341:intron | 40.0% |
!! | GAGCTTTTGAAAACACTTCG+AGG | + | chr6.2:79427151-79427170 | None:intergenic | 40.0% |
!! | GAGGCTTTATTTACGATTCC+GGG | + | chr6.2:79427534-79427553 | None:intergenic | 40.0% |
AAAGACTCAACACGAACTCG+AGG | + | chr6.2:79425619-79425638 | None:intergenic | 45.0% | |
AAAGGAAGACCCTTCCTGTT+TGG | - | chr6.2:79424399-79424418 | MS.gene042341:intron | 45.0% | |
AAGACTCAACACGAACTCGA+GGG | + | chr6.2:79425618-79425637 | None:intergenic | 45.0% | |
AATCCAGAGGCCGAAATGTA+AGG | + | chr6.2:79427558-79427577 | None:intergenic | 45.0% | |
AATCTTCTGCTGCATAGCTG+GGG | + | chr6.2:79425449-79425468 | None:intergenic | 45.0% | |
ACAACAGCTAGTGCGTATCA+TGG | - | chr6.2:79426653-79426672 | MS.gene042341:CDS | 45.0% | |
ACAAGCATCTTGGACATCTG+AGG | + | chr6.2:79425979-79425998 | None:intergenic | 45.0% | |
ACCTTCTGCTTAGCAAATCC+AGG | + | chr6.2:79425589-79425608 | None:intergenic | 45.0% | |
ACGGAAAACCTTACTCCCAA+AGG | - | chr6.2:79424357-79424376 | MS.gene042341:CDS | 45.0% | |
AGATCCTGAGAGGGATTACT+TGG | - | chr6.2:79425246-79425265 | MS.gene042341:intron | 45.0% | |
ATACTGGAGTGTGTCCAGTT+AGG | - | chr6.2:79426244-79426263 | MS.gene042341:CDS | 45.0% | |
ATGCAATGCTTCAGCCAAGA+CGG | + | chr6.2:79426881-79426900 | None:intergenic | 45.0% | |
CAAGCATCTTGGACATCTGA+GGG | + | chr6.2:79425978-79425997 | None:intergenic | 45.0% | |
CACCAACGAGAATCAAAGTC+TGG | + | chr6.2:79424463-79424482 | None:intergenic | 45.0% | |
CCAATTGCTTTATCCGACCT+AGG | - | chr6.2:79426375-79426394 | MS.gene042341:CDS | 45.0% | |
CCTAGGTCGGATAAAGCAAT+TGG | + | chr6.2:79426378-79426397 | None:intergenic | 45.0% | |
CCTTCTGCTTAGCAAATCCA+GGG | + | chr6.2:79425588-79425607 | None:intergenic | 45.0% | |
CTTGACAGTGAAAGACAACC+AGG | - | chr6.2:79426800-79426819 | MS.gene042341:CDS | 45.0% | |
GAGCCGGGATTCATTTGAAA+TGG | - | chr6.2:79426133-79426152 | MS.gene042341:CDS | 45.0% | |
GATACCACAATCTTCCTTCC+AGG | + | chr6.2:79425511-79425530 | None:intergenic | 45.0% | |
GATTATGAGCGAGTTTCCGT+TGG | - | chr6.2:79425951-79425970 | MS.gene042341:CDS | 45.0% | |
GCAGCTTCCAAAACAAACTG+AGG | + | chr6.2:79424655-79424674 | None:intergenic | 45.0% | |
GCTAAGAGGGCGAAAACTAA+CGG | - | chr6.2:79424299-79424318 | MS.gene042341:CDS | 45.0% | |
GGGGGAAGAGTAGAATACAA+TGG | + | chr6.2:79425430-79425449 | None:intergenic | 45.0% | |
GTTGAATTACTTGGGTGCAC+TGG | - | chr6.2:79425897-79425916 | MS.gene042341:CDS | 45.0% | |
GTTGCTGATGACTACCTAAC+TGG | + | chr6.2:79426261-79426280 | None:intergenic | 45.0% | |
TAATGGGACATAGTTGAGCC+GGG | - | chr6.2:79426118-79426137 | MS.gene042341:CDS | 45.0% | |
TACCACAATCTTCCTTCCAG+GGG | + | chr6.2:79425509-79425528 | None:intergenic | 45.0% | |
TAGCAGATGGAACATGCCAA+CGG | + | chr6.2:79426308-79426327 | None:intergenic | 45.0% | |
TATGTCTCCAGCAGGTTCAA+GGG | + | chr6.2:79425305-79425324 | None:intergenic | 45.0% | |
TGACTGCTTACATGTGTGCT+CGG | - | chr6.2:79426203-79426222 | MS.gene042341:CDS | 45.0% | |
TGAGGCACATGAAAGGACTT+TGG | - | chr6.2:79425051-79425070 | MS.gene042341:CDS | 45.0% | |
TTACATTTCGGCCTCTGGAT+TGG | - | chr6.2:79427557-79427576 | MS.gene042341:CDS | 45.0% | |
TTCCGGGAACTTTCAGAAGA+GGG | + | chr6.2:79425195-79425214 | None:intergenic | 45.0% | |
TTGGCTACAGATGTGCTCTT+CGG | - | chr6.2:79425070-79425089 | MS.gene042341:CDS | 45.0% | |
! | AAACAGACCCGACTTGAAGT+TGG | - | chr6.2:79425114-79425133 | MS.gene042341:CDS | 45.0% |
! | AGTTGCAAATTTAGGGTCCC+AGG | - | chr6.2:79425384-79425403 | MS.gene042341:CDS | 45.0% |
! | GCTTCTGAGAGAAGCAATGA+CGG | - | chr6.2:79424991-79425010 | MS.gene042341:intron | 45.0% |
! | TCATCTTTCTGGTGCCAAAC+AGG | + | chr6.2:79424416-79424435 | None:intergenic | 45.0% |
! | TCGTAGTACCTTTGGGAGTA+AGG | + | chr6.2:79424368-79424387 | None:intergenic | 45.0% |
! | TTTCTGGTGCCAAACAGGAA+GGG | + | chr6.2:79424411-79424430 | None:intergenic | 45.0% |
!! | TGGTAGTGGCAAAACTACAC+AGG | - | chr6.2:79424487-79424506 | MS.gene042341:intron | 45.0% |
!!! | AGCAATGACGGATCCACTTT+TGG | - | chr6.2:79425003-79425022 | MS.gene042341:intron | 45.0% |
AACGAAGTTGTCGTAGCACC+AGG | + | chr6.2:79426598-79426617 | None:intergenic | 50.0% | |
AAGAGGGCGAAAACTAACGG+CGG | - | chr6.2:79424302-79424321 | MS.gene042341:CDS | 50.0% | |
ACACGCTTCGCTTCACATTG+TGG | + | chr6.2:79427483-79427502 | None:intergenic | 50.0% | |
ACCACAATCTTCCTTCCAGG+GGG | + | chr6.2:79425508-79425527 | None:intergenic | 50.0% | |
ACGATGACTCTGCTGCTAAG+AGG | - | chr6.2:79424285-79424304 | MS.gene042341:CDS | 50.0% | |
AGAGCACGCATTAAGGTCTC+TGG | + | chr6.2:79425871-79425890 | None:intergenic | 50.0% | |
AGAGGCCGAAATGTAAGGTG+AGG | + | chr6.2:79427553-79427572 | None:intergenic | 50.0% | |
AGCACGCATTAAGGTCTCTG+GGG | + | chr6.2:79425869-79425888 | None:intergenic | 50.0% | |
AGCAGATGGAACATGCCAAC+GGG | + | chr6.2:79426307-79426326 | None:intergenic | 50.0% | |
ATCTTCTGCTGCATAGCTGG+GGG | + | chr6.2:79425448-79425467 | None:intergenic | 50.0% | |
CATCCATCTCTTCAGCCACA+CGG | + | chr6.2:79424762-79424781 | None:intergenic | 50.0% | |
CGATGACTCTGCTGCTAAGA+GGG | - | chr6.2:79424286-79424305 | MS.gene042341:CDS | 50.0% | |
CTTCCGGGAACTTTCAGAAG+AGG | + | chr6.2:79425196-79425215 | None:intergenic | 50.0% | |
GAGCACGCATTAAGGTCTCT+GGG | + | chr6.2:79425870-79425889 | None:intergenic | 50.0% | |
GCTTCCAAGTAATCCCTCTC+AGG | + | chr6.2:79425253-79425272 | None:intergenic | 50.0% | |
GGATGTGACTATTGGGGAAG+AGG | - | chr6.2:79424777-79424796 | MS.gene042341:intron | 50.0% | |
GTATGTCTCCAGCAGGTTCA+AGG | + | chr6.2:79425306-79425325 | None:intergenic | 50.0% | |
GTGACTATTGGGGAAGAGGT+TGG | - | chr6.2:79424781-79424800 | MS.gene042341:intron | 50.0% | |
GTGCTGGAAGAACTCAACCA+GGG | - | chr6.2:79425686-79425705 | MS.gene042341:intron | 50.0% | |
TCACCTTACATTTCGGCCTC+TGG | - | chr6.2:79427552-79427571 | MS.gene042341:CDS | 50.0% | |
TCCGGGAACTTTCAGAAGAG+GGG | + | chr6.2:79425194-79425213 | None:intergenic | 50.0% | |
TCGATTACCGCCATGCTATC+AGG | - | chr6.2:79426036-79426055 | MS.gene042341:CDS | 50.0% | |
TGATTCTGCTCTGGTGTAGG+TGG | - | chr6.2:79426910-79426929 | MS.gene042341:intron | 50.0% | |
TTGCTTTATCCGACCTAGGG+AGG | - | chr6.2:79426379-79426398 | MS.gene042341:CDS | 50.0% | |
TTGGACATCTGAGGGTCCAA+CGG | + | chr6.2:79425970-79425989 | None:intergenic | 50.0% | |
TTGGGTGCACTGGATGATGA+AGG | - | chr6.2:79425907-79425926 | MS.gene042341:CDS | 50.0% | |
TTTCAGATGAGGATGCGTCC+TGG | - | chr6.2:79426577-79426596 | MS.gene042341:CDS | 50.0% | |
! | CACTTCGAGAGCACGCATTA+AGG | + | chr6.2:79425878-79425897 | None:intergenic | 50.0% |
! | CTCGTTGGTGAAACTGGTAG+TGG | - | chr6.2:79424473-79424492 | MS.gene042341:intron | 50.0% |
! | CTCTTCTGAAAGTTCCCGGA+AGG | - | chr6.2:79425194-79425213 | MS.gene042341:CDS | 50.0% |
! | CTTTCTGGTGCCAAACAGGA+AGG | + | chr6.2:79424412-79424431 | None:intergenic | 50.0% |
! | GCAAATTTAGGGTCCCAGGT+TGG | - | chr6.2:79425388-79425407 | MS.gene042341:CDS | 50.0% |
!! | CCCTGGATTTGCTAAGCAGA+AGG | - | chr6.2:79425585-79425604 | MS.gene042341:intron | 50.0% |
AATGTCTGTTTCCCGCCGTG+TGG | - | chr6.2:79424744-79424763 | MS.gene042341:intron | 55.0% | |
AGATGGAACATGCCAACGGG+GGG | + | chr6.2:79426304-79426323 | None:intergenic | 55.0% | |
AGCTCCACCTCCAGTTACAG+AGG | - | chr6.2:79425477-79425496 | MS.gene042341:intron | 55.0% | |
ATGCACTCAGCCTCGTAGAG+TGG | - | chr6.2:79424717-79424736 | MS.gene042341:intron | 55.0% | |
CACGCTATTGAAGTGGACCG+TGG | - | chr6.2:79427264-79427283 | MS.gene042341:intron | 55.0% | |
CACTTTCACAGGGCCAACCT+GGG | + | chr6.2:79425404-79425423 | None:intergenic | 55.0% | |
CAGATGGAACATGCCAACGG+GGG | + | chr6.2:79426305-79426324 | None:intergenic | 55.0% | |
CCACAATCTTCCTTCCAGGG+GGG | + | chr6.2:79425507-79425526 | None:intergenic | 55.0% | |
CCTGGATCACAAGCCCAAGT+GGG | - | chr6.2:79426955-79426974 | MS.gene042341:intron | 55.0% | |
CGTGCTGGAAGAACTCAACC+AGG | - | chr6.2:79425685-79425704 | MS.gene042341:intron | 55.0% | |
CTAGTGCACACCAGAGAGCT+GGG | - | chr6.2:79425662-79425681 | MS.gene042341:intron | 55.0% | |
GACATTGCAGCCACTCTACG+AGG | + | chr6.2:79424730-79424749 | None:intergenic | 55.0% | |
GCAGATGGAACATGCCAACG+GGG | + | chr6.2:79426306-79426325 | None:intergenic | 55.0% | |
GCTCCACCTCCAGTTACAGA+GGG | - | chr6.2:79425478-79425497 | MS.gene042341:intron | 55.0% | |
GGGAACAGAGAGGAAGAGGA+AGG | - | chr6.2:79424241-79424260 | MS.gene042341:CDS | 55.0% | |
GTTCACACCCTTGAACCTGC+TGG | - | chr6.2:79425295-79425314 | MS.gene042341:intron | 55.0% | |
TCTGTAACTGGAGGTGGAGC+TGG | + | chr6.2:79425478-79425497 | None:intergenic | 55.0% | |
TGCAGGTGGCTCATCTTGAG+CGG | - | chr6.2:79426766-79426785 | MS.gene042341:CDS | 55.0% | |
! | CAGACCCGACTTGAAGTTGG+TGG | - | chr6.2:79425117-79425136 | MS.gene042341:CDS | 55.0% |
! | CTTTTTGCGCCTCCCTAGGT+CGG | + | chr6.2:79426391-79426410 | None:intergenic | 55.0% |
! | GCCCCTCTTCTGAAAGTTCC+CGG | - | chr6.2:79425190-79425209 | MS.gene042341:CDS | 55.0% |
! | TAGGGAGGCGCAAAAAGCTG+CGG | - | chr6.2:79426394-79426413 | MS.gene042341:CDS | 55.0% |
!! | ATTAAGGTCTCTGGGGCAGG+AGG | + | chr6.2:79425862-79425881 | None:intergenic | 55.0% |
!! | CGTACTGTGACGGACATACG+CGG | - | chr6.2:79427019-79427038 | MS.gene042341:CDS | 55.0% |
!! | GTACTGTGACGGACATACGC+GGG | - | chr6.2:79427020-79427039 | MS.gene042341:CDS | 55.0% |
!! | TACTGTGACGGACATACGCG+GGG | - | chr6.2:79427021-79427040 | MS.gene042341:CDS | 55.0% |
!! | TTAAGGTCTCTGGGGCAGGA+GGG | + | chr6.2:79425861-79425880 | None:intergenic | 55.0% |
AGTTCCCGGAAGGCTACACC+CGG | - | chr6.2:79425204-79425223 | MS.gene042341:CDS | 60.0% | |
CATCTCTTCAGCCACACGGC+GGG | + | chr6.2:79424758-79424777 | None:intergenic | 60.0% | |
CCACCTCCAGTTACAGAGGG+AGG | - | chr6.2:79425481-79425500 | MS.gene042341:intron | 60.0% | |
CCACTTTCACAGGGCCAACC+TGG | + | chr6.2:79425405-79425424 | None:intergenic | 60.0% | |
CCATCTCTTCAGCCACACGG+CGG | + | chr6.2:79424759-79424778 | None:intergenic | 60.0% | |
CCCACTTGGGCTTGTGATCC+AGG | + | chr6.2:79426958-79426977 | None:intergenic | 60.0% | |
CCCCCCTGGAAGGAAGATTG+TGG | - | chr6.2:79425504-79425523 | MS.gene042341:intron | 60.0% | |
CCTCCCTCTGTAACTGGAGG+TGG | + | chr6.2:79425484-79425503 | None:intergenic | 60.0% | |
GCCTGGATCACAAGCCCAAG+TGG | - | chr6.2:79426954-79426973 | MS.gene042341:intron | 60.0% | |
GCTAGTGCACACCAGAGAGC+TGG | - | chr6.2:79425661-79425680 | MS.gene042341:intron | 60.0% | |
GTGGCTCATCTTGAGCGGAC+AGG | - | chr6.2:79426771-79426790 | MS.gene042341:CDS | 60.0% | |
TTCCACCGGGTGTAGCCTTC+CGG | + | chr6.2:79425212-79425231 | None:intergenic | 60.0% | |
! | CCAGGTTGGCCCTGTGAAAG+TGG | - | chr6.2:79425402-79425421 | MS.gene042341:CDS | 60.0% |
! | GCAGCTTTTTGCGCCTCCCT+AGG | + | chr6.2:79426395-79426414 | None:intergenic | 60.0% |
! | TGACGGACATACGCGGGGAA+TGG | - | chr6.2:79427026-79427045 | MS.gene042341:CDS | 60.0% |
!! | CGCATTAAGGTCTCTGGGGC+AGG | + | chr6.2:79425865-79425884 | None:intergenic | 60.0% |
CCGCCGTGTGGCTGAAGAGA+TGG | - | chr6.2:79424756-79424775 | MS.gene042341:intron | 65.0% | |
GAACATGCCAACGGGGGGCA+CGG | + | chr6.2:79426299-79426318 | None:intergenic | 65.0% | |
GGGCCTCCCTCTGTAACTGG+AGG | + | chr6.2:79425487-79425506 | None:intergenic | 65.0% | |
TCCACCGGGTGTAGCCTTCC+GGG | + | chr6.2:79425211-79425230 | None:intergenic | 65.0% | |
TTCCAGCACGCCCAGCTCTC+TGG | + | chr6.2:79425675-79425694 | None:intergenic | 65.0% | |
CACCAGAGAGCTGGGCGTGC+TGG | - | chr6.2:79425670-79425689 | MS.gene042341:intron | 70.0% | |
CTGTGTTCCGTGCCCCCCGT+TGG | - | chr6.2:79426289-79426308 | MS.gene042341:CDS | 70.0% | |
GGGGGGCCTCCCTCTGTAAC+TGG | + | chr6.2:79425490-79425509 | None:intergenic | 70.0% | |
GTTACAGAGGGAGGCCCCCC+TGG | - | chr6.2:79425490-79425509 | MS.gene042341:intron | 70.0% | |
TCCCGGAAGGCTACACCCGG+TGG | - | chr6.2:79425207-79425226 | MS.gene042341:CDS | 70.0% | |
CAGAGGGAGGCCCCCCTGGA+AGG | - | chr6.2:79425494-79425513 | MS.gene042341:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 79424239 | 79427608 | 79424239 | ID=MS.gene042341 |
chr6.2 | mRNA | 79424239 | 79427608 | 79424239 | ID=MS.gene042341.t1;Parent=MS.gene042341 |
chr6.2 | exon | 79427339 | 79427608 | 79427339 | ID=MS.gene042341.t1.exon1;Parent=MS.gene042341.t1 |
chr6.2 | CDS | 79427339 | 79427608 | 79427339 | ID=cds.MS.gene042341.t1;Parent=MS.gene042341.t1 |
chr6.2 | exon | 79426996 | 79427198 | 79426996 | ID=MS.gene042341.t1.exon2;Parent=MS.gene042341.t1 |
chr6.2 | CDS | 79426996 | 79427198 | 79426996 | ID=cds.MS.gene042341.t1;Parent=MS.gene042341.t1 |
chr6.2 | exon | 79425790 | 79426874 | 79425790 | ID=MS.gene042341.t1.exon3;Parent=MS.gene042341.t1 |
chr6.2 | CDS | 79425790 | 79426874 | 79425790 | ID=cds.MS.gene042341.t1;Parent=MS.gene042341.t1 |
chr6.2 | exon | 79425350 | 79425475 | 79425350 | ID=MS.gene042341.t1.exon4;Parent=MS.gene042341.t1 |
chr6.2 | CDS | 79425350 | 79425475 | 79425350 | ID=cds.MS.gene042341.t1;Parent=MS.gene042341.t1 |
chr6.2 | exon | 79425026 | 79425264 | 79425026 | ID=MS.gene042341.t1.exon5;Parent=MS.gene042341.t1 |
chr6.2 | CDS | 79425026 | 79425264 | 79425026 | ID=cds.MS.gene042341.t1;Parent=MS.gene042341.t1 |
chr6.2 | exon | 79424800 | 79424918 | 79424800 | ID=MS.gene042341.t1.exon6;Parent=MS.gene042341.t1 |
chr6.2 | CDS | 79424800 | 79424918 | 79424800 | ID=cds.MS.gene042341.t1;Parent=MS.gene042341.t1 |
chr6.2 | exon | 79424239 | 79424410 | 79424239 | ID=MS.gene042341.t1.exon7;Parent=MS.gene042341.t1 |
chr6.2 | CDS | 79424239 | 79424410 | 79424239 | ID=cds.MS.gene042341.t1;Parent=MS.gene042341.t1 |
Gene Sequence |
Protein sequence |