AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20876

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20876.t1 MTR_1g086640 99.723 721 2 0 1 721 1 721 0.0 1499
MS.gene20876.t1 MTR_3g052610 86.769 718 65 3 1 691 1 715 0.0 1274
MS.gene20876.t1 MTR_4g485610 85.319 722 66 2 1 721 1 683 0.0 1248
MS.gene20876.t1 MTR_1g023985 52.280 658 296 4 50 706 563 1203 0.0 726
MS.gene20876.t1 MTR_1g114490 53.096 646 279 7 57 701 506 1128 0.0 711
MS.gene20876.t1 MTR_3g023880 53.282 655 284 9 52 702 407 1043 0.0 702
MS.gene20876.t1 MTR_6g061840 51.442 659 297 9 50 702 247 888 0.0 674
MS.gene20876.t1 MTR_5g075310 49.469 659 273 9 47 702 199 800 0.0 632
MS.gene20876.t1 MTR_3g054400 44.196 672 346 9 50 714 361 1010 0.0 603
MS.gene20876.t1 MTR_2g098440 44.179 670 347 9 50 712 564 1213 0.0 602
MS.gene20876.t1 MTR_2g015320 46.027 667 317 9 50 691 46 694 0.0 595
MS.gene20876.t1 MTR_6g061840 55.009 529 220 6 50 573 247 762 0.0 587
MS.gene20876.t1 MTR_7g095080 41.384 708 340 9 44 693 35 725 0.0 545
MS.gene20876.t1 MTR_8g080240 41.718 652 337 11 56 684 3 634 2.99e-174 514
MS.gene20876.t1 MTR_8g080240 41.718 652 337 11 56 684 3 634 6.04e-174 514
MS.gene20876.t1 MTR_8g080240 43.098 594 300 10 56 633 3 574 6.71e-164 485
MS.gene20876.t1 MTR_8g041990 41.374 626 234 12 47 667 96 593 7.18e-148 446
MS.gene20876.t1 MTR_6g061840 57.386 352 138 2 50 401 247 586 2.77e-135 411
MS.gene20876.t1 MTR_4g094992 38.921 519 283 8 197 693 13 519 8.83e-121 372
MS.gene20876.t1 MTR_1g109170 33.795 722 376 22 38 676 313 1015 4.93e-106 350
MS.gene20876.t1 MTR_1g109170 33.795 722 376 22 38 676 313 1015 5.99e-106 350
MS.gene20876.t1 MTR_1g056490 33.291 796 430 20 14 721 188 970 1.11e-103 340
MS.gene20876.t1 MTR_3g014030 31.571 662 393 14 57 686 266 899 9.53e-92 314
MS.gene20876.t1 MTR_3g086770 31.361 676 410 16 40 686 249 899 2.36e-88 304
MS.gene20876.t1 MTR_0267s0070 31.832 644 377 15 77 686 939 1554 1.23e-87 302
MS.gene20876.t1 MTR_1543s0010 47.687 281 140 2 291 571 1 274 1.90e-81 261
MS.gene20876.t1 MTR_3g055020 42.400 250 142 1 370 619 49 296 1.71e-62 216
MS.gene20876.t1 MTR_4g023590 41.544 272 132 5 49 293 264 535 7.21e-57 210
MS.gene20876.t1 MTR_4g023590 26.899 487 256 10 290 685 679 1156 9.98e-38 152
MS.gene20876.t1 MTR_8g106630 30.498 482 290 14 269 721 551 1016 1.20e-53 201
MS.gene20876.t1 MTR_8g106630 44.131 213 112 3 38 249 257 463 8.48e-47 180
MS.gene20876.t1 MTR_8g044260 33.030 439 264 12 262 682 517 943 1.93e-52 197
MS.gene20876.t1 MTR_8g044260 40.254 236 134 3 15 249 210 439 7.51e-41 161
MS.gene20876.t1 MTR_8g045110 31.787 431 262 15 262 676 104 518 7.11e-52 191
MS.gene20876.t1 MTR_4g134790 30.932 472 248 13 272 676 909 1369 1.10e-46 179
MS.gene20876.t1 MTR_4g134790 39.070 215 120 3 44 249 592 804 1.54e-37 151
MS.gene20876.t1 MTR_4g134790 30.932 472 248 13 272 676 906 1366 1.18e-46 179
MS.gene20876.t1 MTR_4g134790 39.070 215 120 3 44 249 592 804 1.63e-37 151
MS.gene20876.t1 MTR_5g090430 32.973 370 223 9 272 627 441 799 2.35e-43 169
MS.gene20876.t1 MTR_5g090430 35.749 207 118 3 54 249 71 273 4.34e-35 143
MS.gene20876.t1 MTR_5g090430 32.973 370 223 9 272 627 554 912 2.60e-43 169
MS.gene20876.t1 MTR_5g090430 35.749 207 118 3 54 249 184 386 4.71e-35 143
MS.gene20876.t1 MTR_4g120070 27.778 486 252 11 290 685 605 1081 1.36e-37 151
MS.gene20876.t1 MTR_4g120070 35.685 241 98 5 110 293 221 461 2.62e-35 144
MS.gene20876.t1 MTR_1g088590 39.535 172 94 3 57 227 30 192 4.96e-28 121
MS.gene20876.t1 MTR_1g088590 36.879 141 83 3 338 473 328 467 3.34e-15 80.5
MS.gene20876.t1 MTR_3g054420 36.842 95 50 1 497 591 1 85 1.13e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20876.t1 AT3G62310 89.945 726 68 3 1 721 1 726 0.0 1370
MS.gene20876.t1 AT2G47250 88.340 729 77 2 1 721 1 729 0.0 1350
MS.gene20876.t1 AT3G62310 89.675 523 50 2 1 519 1 523 0.0 966
MS.gene20876.t1 AT3G62310 89.036 529 53 3 1 524 1 529 0.0 962
MS.gene20876.t1 AT3G26560 52.432 658 295 5 50 706 508 1148 0.0 720
MS.gene20876.t1 AT1G32490 51.170 684 306 10 29 702 370 1035 0.0 717
MS.gene20876.t1 AT1G32490 51.170 684 306 10 29 702 360 1025 0.0 717
MS.gene20876.t1 AT2G35340 51.098 683 307 10 29 702 371 1035 0.0 710
MS.gene20876.t1 AT2G35340 51.098 683 307 10 29 702 233 897 0.0 709
MS.gene20876.t1 AT4G16680 51.135 661 296 8 52 706 130 769 0.0 674
MS.gene20876.t1 AT5G13010 44.410 653 335 8 50 693 551 1184 0.0 607
MS.gene20876.t1 AT4G18465 46.316 665 319 9 47 689 38 686 0.0 593
MS.gene20876.t1 AT1G26370 42.716 707 326 11 42 689 27 713 0.0 546
MS.gene20876.t1 AT1G27900 41.077 650 347 11 57 684 4 639 1.59e-172 511
MS.gene20876.t1 AT4G16680 57.809 429 164 3 52 480 210 621 4.33e-167 496
MS.gene20876.t1 AT5G14900 76.451 293 66 2 428 717 2 294 5.49e-165 477
MS.gene20876.t1 AT1G27900 43.169 549 288 8 57 595 4 538 1.30e-159 472
MS.gene20876.t1 AT1G27900 43.038 553 291 8 57 599 4 542 1.75e-159 473
MS.gene20876.t1 AT1G48650 33.702 724 377 21 37 676 282 986 1.03e-100 335
MS.gene20876.t1 AT1G48650 34.022 726 372 23 37 676 282 986 1.19e-100 335
MS.gene20876.t1 AT2G01130 30.552 779 414 21 38 716 139 890 2.18e-96 321
MS.gene20876.t1 AT2G01130 30.552 779 414 21 38 716 204 955 1.07e-95 320
MS.gene20876.t1 AT5G10370 32.180 665 391 15 57 688 306 943 2.88e-93 318
MS.gene20876.t1 AT4G01020 32.635 668 384 17 57 688 303 940 6.25e-92 315
MS.gene20876.t1 AT2G35920 35.294 459 255 16 240 676 417 855 1.15e-63 229
MS.gene20876.t1 AT2G35920 45.876 194 100 3 54 245 167 357 2.42e-43 169
MS.gene20876.t1 AT2G35920 35.294 459 255 16 240 676 475 913 2.07e-63 229
MS.gene20876.t1 AT2G35920 45.876 194 100 3 54 245 225 415 3.04e-43 169
MS.gene20876.t1 AT2G35920 35.153 458 257 15 240 676 507 945 3.64e-63 228
MS.gene20876.t1 AT2G35920 45.876 194 100 3 54 245 257 447 3.62e-43 168
MS.gene20876.t1 AT1G33390 31.111 450 231 10 303 685 645 1082 1.19e-52 197
MS.gene20876.t1 AT1G33390 39.130 276 140 3 46 293 230 505 1.89e-50 191
MS.gene20876.t1 AT1G33390 31.111 450 231 10 303 685 645 1082 1.19e-52 197
MS.gene20876.t1 AT1G33390 39.130 276 140 3 46 293 230 505 1.89e-50 191
MS.gene20876.t1 AT5G04895 33.180 434 258 13 262 676 528 948 4.32e-49 187
MS.gene20876.t1 AT5G04895 42.661 218 118 3 33 249 239 450 3.28e-45 175
MS.gene20876.t1 AT1G58060 29.512 471 258 13 268 674 913 1373 6.22e-46 177
MS.gene20876.t1 AT1G58060 38.696 230 123 4 33 249 590 814 2.63e-38 154
MS.gene20876.t1 AT1G58050 32.578 353 201 11 268 596 880 1219 1.26e-42 167
MS.gene20876.t1 AT1G58050 36.797 231 125 5 32 249 572 794 2.13e-36 148
MS.gene20876.t1 AT2G30800 33.423 371 220 10 272 627 552 910 1.13e-41 164
MS.gene20876.t1 AT2G30800 39.216 204 118 2 49 249 179 379 3.84e-41 162
MS.gene20876.t1 AT2G30800 33.423 371 220 10 272 627 209 567 1.36e-41 163
MS.gene20876.t1 AT1G06670 36.364 220 134 2 30 246 190 406 1.80e-39 157
MS.gene20876.t1 AT1G06670 32.831 332 192 8 272 587 576 892 1.71e-36 148
MS.gene20876.t1 AT1G06670 35.909 220 135 2 30 246 190 406 2.15e-39 157
MS.gene20876.t1 AT1G06670 32.831 332 192 8 272 587 576 892 2.61e-36 147
MS.gene20876.t1 AT2G47680 29.147 422 233 12 56 437 25 420 7.70e-34 139

Find 166 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGACAACTTCGTTAATAAT+AGG 0.221173 1.3:-61354449 MS.gene20876:CDS
ATCAAAAGAAGTTGCAAATA+TGG 0.229148 1.3:-61355786 MS.gene20876:CDS
TCTATTTCTGCAATGTTATC+AGG 0.235672 1.3:-61355125 MS.gene20876:intron
GCAAAGGTATCATGAGATTT+TGG 0.239514 1.3:-61357544 MS.gene20876:CDS
ATCATCTTCTTGCGCTTATC+TGG 0.249848 1.3:+61356484 None:intergenic
GCCTCCAAGTAATCTCTTTC+CGG 0.258286 1.3:+61355911 None:intergenic
ACTTGAAGCTGAAAAGTTTC+AGG 0.258644 1.3:-61356008 MS.gene20876:CDS
TCCACTGGATGCAGCCTTCC+AGG 0.271539 1.3:+61355953 None:intergenic
AGATTAGATCTCAAAATTTC+AGG 0.273158 1.3:+61355392 None:intergenic
AAAGCACGCATTAAGGTTTC+AGG 0.274292 1.3:+61355293 None:intergenic
TAAGGCTTCATTTACGATTC+CGG 0.290879 1.3:+61353295 None:intergenic
AGTTCTTACATTGAAGAAAC+TGG 0.306519 1.3:-61355360 MS.gene20876:CDS
GACCTTCTGCTTAGCAAATC+CGG 0.312615 1.3:+61355574 None:intergenic
GAAACTTCCTTGACAATTGA+TGG 0.321741 1.3:-61355617 MS.gene20876:CDS
TTGATTCTTGTTGGTGAAAC+TGG 0.333065 1.3:-61357450 MS.gene20876:CDS
TTTCAGACGAGGATGCTTCT+TGG 0.336584 1.3:-61354476 MS.gene20876:intron
AAGGCTTCATTTACGATTCC+GGG 0.345491 1.3:+61353296 None:intergenic
AAAATCTTCTGCTGCATAGC+TGG 0.349787 1.3:+61355713 None:intergenic
ATTACTTGGAGGCTGCTATT+AGG 0.353702 1.3:-61355901 MS.gene20876:CDS
TCCTTAACTGGAGGTGGAGC+TGG 0.355991 1.3:+61355686 None:intergenic
ATCATTATTGAAACTTCTTT+CGG 0.356481 1.3:+61355433 None:intergenic
CACTTCCAAAGCACGCATTA+AGG 0.356922 1.3:+61355286 None:intergenic
TCATGATACCTTTGCGAGTA+AGG 0.359388 1.3:+61357552 None:intergenic
TCCTCTTTCTGATGCCAAAC+AGG 0.365319 1.3:+61357504 None:intergenic
AAAACTAACGGCGGTTTAAT+CGG 0.374136 1.3:-61357606 MS.gene20876:CDS
TGATGGGTACAGAGAGGAAG+AGG 0.375263 1.3:-61357677 MS.gene20876:CDS
TTGGCTACTGATGTGCTATT+CGG 0.379232 1.3:-61356091 MS.gene20876:CDS
TGTGCTATTCGGTCTTCTTA+AGG 0.379320 1.3:-61356080 MS.gene20876:CDS
CGCATTAAGGTTTCAGGGGC+AGG 0.385326 1.3:+61355299 None:intergenic
AGGTCTATAACCCTCGAGTT+CGG 0.385785 1.3:-61355556 MS.gene20876:CDS
AAGAAATGGATGTGAGTATT+GGG 0.386602 1.3:-61356402 MS.gene20876:CDS
GGTCTATAACCCTCGAGTTC+GGG 0.388070 1.3:-61355555 MS.gene20876:CDS
AATCAGACTTTGATTCTTGT+TGG 0.394110 1.3:-61357459 MS.gene20876:CDS
TCAAAAGAAGTTGCAAATAT+GGG 0.394219 1.3:-61355785 MS.gene20876:CDS
CCTAGGCCGGATAAAGCAAT+TGG 0.395838 1.3:+61354693 None:intergenic
GCCCCTCTTATGAAAGTTCC+TGG 0.399613 1.3:-61355971 MS.gene20876:CDS
TGAAACCTTAATGCGTGCTT+TGG 0.400378 1.3:-61355291 MS.gene20876:CDS
TAGTACCCAATTGCTTTATC+CGG 0.405064 1.3:-61354699 MS.gene20876:CDS
AGTTCGGGTTGAGTCTTTGT+TGG 0.407389 1.3:-61355540 MS.gene20876:CDS
CCCACTCGGGCTTGTGGTCC+AGG 0.408784 1.3:+61354095 None:intergenic
CCTCCCTCCTTAACTGGAGG+TGG 0.412177 1.3:+61355680 None:intergenic
CGACAACTTCGTTAATAATA+GGG 0.421091 1.3:-61354448 MS.gene20876:CDS
AGAGGAAAACTCTTCCTGTT+TGG 0.432786 1.3:-61357518 MS.gene20876:CDS
CTTCCAGGAACTTTCATAAG+AGG 0.440929 1.3:+61355968 None:intergenic
ACGCCGTGTGGCTGAAGAAA+TGG 0.441487 1.3:-61356416 MS.gene20876:CDS
ACGTGCTGGAAGAACTCAAC+CGG 0.444434 1.3:-61355477 MS.gene20876:CDS
CAGCTTTCACAGGGCCCACC+TGG 0.445130 1.3:+61355759 None:intergenic
GATGAAGCCAAAGCTAGGTT+TGG 0.446034 1.3:-61354652 MS.gene20876:CDS
GCCAGCTCCACCTCCAGTTA+AGG 0.454672 1.3:-61355687 MS.gene20876:CDS
TCCTGTTTGGCATCAGAAAG+AGG 0.454811 1.3:-61357505 MS.gene20876:CDS
TTCCAGCACGTCCAGACCTC+TGG 0.457870 1.3:+61355489 None:intergenic
ACCTTCTGCTTAGCAAATCC+GGG 0.460121 1.3:+61355575 None:intergenic
GCTAGTGCACACCAGAGGTC+TGG 0.463575 1.3:-61355500 MS.gene20876:CDS
AGTCAGTGCTGCATAACTTC+AGG 0.466745 1.3:+61354367 None:intergenic
AGCAATGACGGATCCACTCT+TGG 0.466749 1.3:-61356158 MS.gene20876:CDS
AAAGATGCTTGTTGTTAGTC+CGG 0.469630 1.3:-61355174 MS.gene20876:CDS
TTGTGGTCCAGGCAATTTGA+TGG 0.470835 1.3:+61354106 None:intergenic
TTTGGAAGTGTTGAATTACT+TGG 0.471069 1.3:-61355273 MS.gene20876:CDS
GTGAGTATTGGGGAAGAGGT+TGG 0.473162 1.3:-61356391 MS.gene20876:CDS
AAATCTTCTGCTGCATAGCT+GGG 0.474547 1.3:+61355714 None:intergenic
GATGTGTCCAAACCTAGCTT+TGG 0.475297 1.3:+61354645 None:intergenic
CTTCAATGTAAGAACTGTGT+TGG 0.475698 1.3:+61355367 None:intergenic
CTTGAAGCTGAAAAGTTTCA+GGG 0.477243 1.3:-61356007 MS.gene20876:CDS
TGGCAGCTACTCTACGAGGC+TGG 0.478507 1.3:+61356449 None:intergenic
TGAAGCTCACGAAAGGACTT+TGG 0.481458 1.3:-61356110 MS.gene20876:CDS
GGAACCGGAAAGAGATTACT+TGG 0.482512 1.3:-61355915 MS.gene20876:CDS
GAAGGTAACTTAACAAAGCT+TGG 0.483258 1.3:-61355236 MS.gene20876:CDS
TCAGAAAGAGGATTTCTTGA+AGG 0.485105 1.3:-61357493 MS.gene20876:CDS
ACAACAGCTGGTGCGTATCA+TGG 0.489319 1.3:-61354400 MS.gene20876:CDS
GAAGAAATGGATGTGAGTAT+TGG 0.493314 1.3:-61356403 MS.gene20876:CDS
TACAATGGCACAGCTTTCAC+AGG 0.495335 1.3:+61355749 None:intergenic
CACCAGAGGTCTGGACGTGC+TGG 0.499927 1.3:-61355491 MS.gene20876:CDS
ATAAGAAAGGCAATGCTAGC+AGG 0.500431 1.3:-61354318 MS.gene20876:CDS
GTTGAATTACTTGGGTGCAC+TGG 0.506759 1.3:-61355264 MS.gene20876:CDS
CTTGCATCCATCAAATTGCC+TGG 0.508234 1.3:-61354113 MS.gene20876:CDS
CGACGACGCTGCCGCGAAGA+TGG 0.513614 1.3:-61357631 MS.gene20876:CDS
TGATAATGTTCGACAACAGC+TGG 0.515447 1.3:-61354412 MS.gene20876:CDS
CCAATTGCTTTATCCGGCCT+AGG 0.518052 1.3:-61354693 MS.gene20876:CDS
TTCCAGGAACTTTCATAAGA+GGG 0.520687 1.3:+61355969 None:intergenic
AATCTCATTAACCGTTGGAA+TGG 0.523999 1.3:-61357579 MS.gene20876:CDS
ATAACCACCAACTTCAAGTC+AGG 0.524486 1.3:+61356040 None:intergenic
CTTGTTGGTGAAACTGGTAG+TGG 0.527235 1.3:-61357444 MS.gene20876:CDS
TTGGAAGTGTTGAATTACTT+GGG 0.527843 1.3:-61355272 MS.gene20876:CDS
CAAGAAACGAGAGAAGGAAA+AGG 0.529166 1.3:-61353325 MS.gene20876:CDS
GGGTACAGAGAGGAAGAGGA+AGG 0.529545 1.3:-61357673 MS.gene20876:CDS
AAACAGACCTGACTTGAAGT+TGG 0.531317 1.3:-61356047 MS.gene20876:CDS
GGATGTGAGTATTGGGGAAG+AGG 0.533162 1.3:-61356395 MS.gene20876:CDS
AAGCACGCATTAAGGTTTCA+GGG 0.537490 1.3:+61355294 None:intergenic
CAAAAGAAGTTGCAAATATG+GGG 0.540511 1.3:-61355784 MS.gene20876:CDS
ATTAAGGTTTCAGGGGCAGG+AGG 0.542805 1.3:+61355302 None:intergenic
CAATTGCTTTATCCGGCCTA+GGG 0.544509 1.3:-61354692 MS.gene20876:CDS
CTGCGGATGAAGCCAAAGCT+AGG 0.545543 1.3:-61354657 MS.gene20876:CDS
ATTCACATGTGTGAACCTGC+TGG 0.545714 1.3:-61355866 MS.gene20876:CDS
CTACTACGTCAACATAAGAA+AGG 0.551235 1.3:-61354331 MS.gene20876:CDS
GGCAGCTACTCTACGAGGCT+GGG 0.553153 1.3:+61356450 None:intergenic
AGCTCCACCTCCAGTTAAGG+AGG 0.554361 1.3:-61355684 MS.gene20876:CDS
GTGGCTCATCTTGAGCGCAC+AGG 0.556316 1.3:-61354282 MS.gene20876:CDS
TTGAAGATTGCAGTAGTGCA+AGG 0.559374 1.3:-61356354 MS.gene20876:CDS
TCCTGGAAGGCTGCATCCAG+TGG 0.561915 1.3:-61355954 MS.gene20876:CDS
AGATAACCCACTCGGGCTTG+TGG 0.563258 1.3:+61354089 None:intergenic
GATTATGAGTGAGTTTCCGT+TGG 0.563935 1.3:-61355210 MS.gene20876:CDS
AGAAGGAAAAGGATGAAGCC+CGG 0.564217 1.3:-61353314 MS.gene20876:CDS
AAAACAAGTATGTCTCCAGC+AGG 0.564551 1.3:+61355851 None:intergenic
CCCCGGATTTGCTAAGCAGA+AGG 0.565728 1.3:-61355576 MS.gene20876:CDS
ACACGCTTCGCTTCACATTG+TGG 0.566257 1.3:+61353363 None:intergenic
ATGAATATGTTCTTACGAGT+CGG 0.567963 1.3:-61354063 MS.gene20876:CDS
CTAGGCCGGATAAAGCAATT+GGG 0.570838 1.3:+61354694 None:intergenic
CAGACCTGACTTGAAGTTGG+TGG 0.576381 1.3:-61356044 MS.gene20876:CDS
GACTATGCCATCAATTGTCA+AGG 0.576524 1.3:+61355610 None:intergenic
GGGCCTCCCTCCTTAACTGG+AGG 0.578464 1.3:+61355677 None:intergenic
GCTAGGTTTGGACACATCGA+TGG 0.581882 1.3:-61354640 MS.gene20876:CDS
CTTGACAGTTAAAGACAACC+AGG 0.583787 1.3:-61354253 MS.gene20876:intron
GTAACAATCTCATTAACCGT+TGG 0.583829 1.3:-61357584 MS.gene20876:CDS
ACTTTGTATCGCTCCAAGAG+TGG 0.584175 1.3:+61356145 None:intergenic
CTCTTATGAAAGTTCCTGGA+AGG 0.587560 1.3:-61355967 MS.gene20876:CDS
ACAAGCATCTTTGACATCTG+AGG 0.589350 1.3:+61355185 None:intergenic
CGTGCTGGAAGAACTCAACC+GGG 0.589404 1.3:-61355476 MS.gene20876:CDS
AAAGACTCAACCCGAACTCG+AGG 0.589456 1.3:+61355545 None:intergenic
TGACGGATATTCGTGGTGAA+TGG 0.590962 1.3:-61354024 MS.gene20876:intron
AATCTTCTGCTGCATAGCTG+GGG 0.591377 1.3:+61355715 None:intergenic
GCGAAGATGGTCAAAACTAA+CGG 0.593263 1.3:-61357618 MS.gene20876:CDS
TAAAGTCTAAAGCATTTCCC+CGG 0.593271 1.3:+61355458 None:intergenic
ATGGAAAACCTTACTCGCAA+AGG 0.594193 1.3:-61357560 MS.gene20876:CDS
TTCATTATAGATAACCCACT+CGG 0.595328 1.3:+61354081 None:intergenic
TTGCTTTATCCGGCCTAGGG+AGG 0.597285 1.3:-61354689 MS.gene20876:CDS
ATAGTCTATGTTATTGACCC+CGG 0.597720 1.3:-61355593 MS.gene20876:CDS
CACCGCAGATATCTAACAGA+TGG 0.599905 1.3:-61356196 MS.gene20876:intron
CAAGCATCTTTGACATCTGA+GGG 0.603507 1.3:+61355186 None:intergenic
AGCTGGTGCGTATCATGGCT+AGG 0.604246 1.3:-61354395 MS.gene20876:CDS
CATCCATTTCTTCAGCCACA+CGG 0.607772 1.3:+61356413 None:intergenic
TCCAGGAACTTTCATAAGAG+GGG 0.608756 1.3:+61355970 None:intergenic
AGCAGGATATTTCATGCAGG+TGG 0.610174 1.3:-61354301 MS.gene20876:CDS
TTCTTGATGAAGCTCACGAA+AGG 0.610395 1.3:-61356117 MS.gene20876:CDS
GTTCTTACATTGAAGAAACT+GGG 0.614265 1.3:-61355359 MS.gene20876:CDS
GCCTGGACCACAAGCCCGAG+TGG 0.615553 1.3:-61354096 MS.gene20876:CDS
TTTGACATCTGAGGGTCCAA+CGG 0.616105 1.3:+61355194 None:intergenic
AGCACGCATTAAGGTTTCAG+GGG 0.617250 1.3:+61355295 None:intergenic
CAGCTTCTAAAACGAACTGA+GGG 0.619508 1.3:+61356521 None:intergenic
ACCGGAAAGAGATTACTTGG+AGG 0.620820 1.3:-61355912 MS.gene20876:CDS
CACACGGCGTGAAACAGACA+TGG 0.620880 1.3:+61356429 None:intergenic
GCTAGCAGGATATTTCATGC+AGG 0.627840 1.3:-61354304 MS.gene20876:CDS
TTAAGGTTTCAGGGGCAGGA+GGG 0.628140 1.3:+61355303 None:intergenic
CATGTCTGTTTCACGCCGTG+TGG 0.629042 1.3:-61356428 MS.gene20876:CDS
ATCTTCTGCTGCATAGCTGG+GGG 0.635596 1.3:+61355716 None:intergenic
TTAGACAAATCATAGTAATG+TGG 0.637983 1.3:+61353390 None:intergenic
GAATTTCATACGTACTGTGA+CGG 0.638943 1.3:-61354041 MS.gene20876:CDS
TCATTATAGATAACCCACTC+GGG 0.639528 1.3:+61354082 None:intergenic
TCATTCGAACAGTTGAACTC+CGG 0.639894 1.3:+61355155 None:intergenic
CGTACTGTGACGGATATTCG+TGG 0.642151 1.3:-61354031 MS.gene20876:CDS
AGAAATGGATGTGAGTATTG+GGG 0.642173 1.3:-61356401 MS.gene20876:CDS
CCACCTCCAGTTAAGGAGGG+AGG 0.644076 1.3:-61355680 MS.gene20876:CDS
CCTGGACCACAAGCCCGAGT+GGG 0.651385 1.3:-61354095 MS.gene20876:CDS
TTGGGTGCACTGGATGATGA+AGG 0.657309 1.3:-61355254 MS.gene20876:CDS
GCTTTACAAGAAACGAGAGA+AGG 0.659120 1.3:-61353331 MS.gene20876:CDS
AAAAGAAGTTGCAAATATGG+GGG 0.660073 1.3:-61355783 MS.gene20876:CDS
AAGACTCAACCCGAACTCGA+GGG 0.660253 1.3:+61355546 None:intergenic
ACAGCTTCTAAAACGAACTG+AGG 0.669791 1.3:+61356520 None:intergenic
GCTCCACCTCCAGTTAAGGA+GGG 0.670620 1.3:-61355683 MS.gene20876:CDS
AAAATTTCAGGATAAGTCTG+CGG 0.680372 1.3:+61355404 None:intergenic
GGAGGCTGCTATTAGGACAG+TGG 0.681365 1.3:-61355894 MS.gene20876:CDS
ACAATGGCACAGCTTTCACA+GGG 0.687644 1.3:+61355750 None:intergenic
CCTTCTGCTTAGCAAATCCG+GGG 0.695741 1.3:+61355576 None:intergenic
GACATGGCAGCTACTCTACG+AGG 0.698435 1.3:+61356445 None:intergenic
CAAAAGCTAGTGCACACCAG+AGG 0.706637 1.3:-61355505 MS.gene20876:CDS
GTGCTGGAAGAACTCAACCG+GGG 0.783475 1.3:-61355475 MS.gene20876:CDS
AAGATGGTCAAAACTAACGG+CGG 0.785469 1.3:-61357615 MS.gene20876:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATATGATATTTACT+GGG - chr1.3:61357071-61357090 MS.gene20876:intron 10.0%
!!! TATTTTTATATGATATTTAC+TGG - chr1.3:61357070-61357089 MS.gene20876:intron 10.0%
!! AAAATTATATGAACACTAAT+TGG - chr1.3:61354026-61354045 MS.gene20876:CDS 15.0%
!! AGAATAAAATGAAAAAAAGT+AGG + chr1.3:61356423-61356442 None:intergenic 15.0%
!!! ATTTGCTAATTTAATTTCTT+TGG - chr1.3:61354411-61354430 MS.gene20876:CDS 15.0%
!!! GTAATTTTTTTATCTAAACT+AGG + chr1.3:61357142-61357161 None:intergenic 15.0%
!!! GTTTATATGTTTTTGAATTA+TGG - chr1.3:61353707-61353726 MS.gene20876:intron 15.0%
!!! TATATGATTTTGTATAGTTT+AGG + chr1.3:61353993-61354012 None:intergenic 15.0%
!! AAAAAAAATAGAGGAGAATT+TGG - chr1.3:61354338-61354357 MS.gene20876:CDS 20.0%
!! ATAGCTTATGCAAATAAATA+TGG - chr1.3:61353766-61353785 MS.gene20876:intron 20.0%
!! ATCATTATTGAAACTTCTTT+CGG + chr1.3:61355547-61355566 None:intergenic 20.0%
!! GTTTATTAAATGTATGCAAA+TGG - chr1.3:61356476-61356495 MS.gene20876:CDS 20.0%
!! TAAATATGAATGCAAATCTT+CGG + chr1.3:61356816-61356835 None:intergenic 20.0%
!! TAATTTCGGATTATAAACAA+TGG + chr1.3:61357340-61357359 None:intergenic 20.0%
!! TAGTTTAGGAACTAAATTAA+TGG + chr1.3:61353979-61353998 None:intergenic 20.0%
!!! CTGTTTATTTTTTTTCTGAT+TGG - chr1.3:61356451-61356470 MS.gene20876:CDS 20.0%
!!! TTAATGGATTTCATATACTT+AGG + chr1.3:61353963-61353982 None:intergenic 20.0%
! AAAAAAATTACAAGCCTTGA+TGG - chr1.3:61357151-61357170 MS.gene20876:intron 25.0%
! AAAAAATTACAAGCCTTGAT+GGG - chr1.3:61357152-61357171 MS.gene20876:intron 25.0%
! AAAAAGCTAATTGTAGGATT+GGG - chr1.3:61354147-61354166 MS.gene20876:intron 25.0%
! AAAAATAAGTCAATCCAAAC+AGG - chr1.3:61353910-61353929 MS.gene20876:intron 25.0%
! AATTACACAACGTAATTTCA+AGG + chr1.3:61354675-61354694 None:intergenic 25.0%
! ACATTTCAGAATAAAAGAGA+TGG + chr1.3:61354744-61354763 None:intergenic 25.0%
! ACTTAAAGGGATTAAATCTA+TGG + chr1.3:61353654-61353673 None:intergenic 25.0%
! AGATTAGATCTCAAAATTTC+AGG + chr1.3:61355588-61355607 None:intergenic 25.0%
! AGTGAATACTAGATATCTTA+TGG - chr1.3:61354213-61354232 MS.gene20876:intron 25.0%
! AGTGAATACTAGATATGTTA+TGG - chr1.3:61354176-61354195 MS.gene20876:intron 25.0%
! ATAAATCAATTTAGCAAACC+TGG + chr1.3:61356745-61356764 None:intergenic 25.0%
! ATATACTTAGGTACTACTTA+AGG + chr1.3:61353951-61353970 None:intergenic 25.0%
! ATCAAAAGAAGTTGCAAATA+TGG - chr1.3:61355191-61355210 MS.gene20876:CDS 25.0%
! ATTTCAGAATAAAAGAGATG+GGG + chr1.3:61354742-61354761 None:intergenic 25.0%
! CAATACAAAATGAAAAACAG+AGG + chr1.3:61356771-61356790 None:intergenic 25.0%
! CATTTCAGAATAAAAGAGAT+GGG + chr1.3:61354743-61354762 None:intergenic 25.0%
! GATTTAATCCCTTTAAGTAA+TGG - chr1.3:61353656-61353675 MS.gene20876:intron 25.0%
! GTGAATACTAGATATCTTAT+GGG - chr1.3:61354214-61354233 MS.gene20876:intron 25.0%
! GTGAATACTAGATATGTTAT+GGG - chr1.3:61354177-61354196 MS.gene20876:intron 25.0%
! TAAAAAGCTAATTGTAGGAT+TGG - chr1.3:61354146-61354165 MS.gene20876:intron 25.0%
! TCAAAAGAAGTTGCAAATAT+GGG - chr1.3:61355192-61355211 MS.gene20876:CDS 25.0%
! TGAAGTAAAAAGCTAATTGT+AGG - chr1.3:61354141-61354160 MS.gene20876:intron 25.0%
! TGAGTATAAAAAATTTCCAC+TGG + chr1.3:61355042-61355061 None:intergenic 25.0%
! TTAGACAAATCATAGTAATG+TGG + chr1.3:61357590-61357609 None:intergenic 25.0%
! TTGAATTCTACTCATTACTA+TGG - chr1.3:61357437-61357456 MS.gene20876:CDS 25.0%
!! ACTTAAGGTATCAACATTAA+GGG + chr1.3:61353936-61353955 None:intergenic 25.0%
!! CAACTTCTTTTGATATTTTG+CGG + chr1.3:61355185-61355204 None:intergenic 25.0%
!! TACTTAAGGTATCAACATTA+AGG + chr1.3:61353937-61353956 None:intergenic 25.0%
!! TGGTTATGTTTAGATCATTT+TGG - chr1.3:61353606-61353625 MS.gene20876:intron 25.0%
!!! AATTTTTTATACTCAGGAAC+CGG - chr1.3:61355047-61355066 MS.gene20876:intron 25.0%
!!! AGTGGAAATTTTTTATACTC+AGG - chr1.3:61355041-61355060 MS.gene20876:intron 25.0%
!!! ATTTCTTTGGTGTGTAATTT+TGG - chr1.3:61354424-61354443 MS.gene20876:CDS 25.0%
!!! TACTTCGTTTTGTTGTTATT+TGG - chr1.3:61353586-61353605 MS.gene20876:intron 25.0%
!!! TTTAGTTCATTTTGACTTCA+TGG - chr1.3:61355650-61355669 MS.gene20876:CDS 25.0%
!!! TTTCTTTGGTGTGTAATTTT+GGG - chr1.3:61354425-61354444 MS.gene20876:CDS 25.0%
AAAAATTACAAGCCTTGATG+GGG - chr1.3:61357153-61357172 MS.gene20876:intron 30.0%
AAAAGAAGTTGCAAATATGG+GGG - chr1.3:61355194-61355213 MS.gene20876:CDS 30.0%
AAAAGCTAATTGTAGGATTG+GGG - chr1.3:61354148-61354167 MS.gene20876:intron 30.0%
AAAATTTCAGGATAAGTCTG+CGG + chr1.3:61355576-61355595 None:intergenic 30.0%
AAGAAATGGATGTGAGTATT+GGG - chr1.3:61354575-61354594 MS.gene20876:intron 30.0%
AAGATCCGTAGTATTATTAC+TGG + chr1.3:61357487-61357506 None:intergenic 30.0%
AATCAGACTTTGATTCTTGT+TGG - chr1.3:61353518-61353537 MS.gene20876:intron 30.0%
ACCAGATGTTTCAGTAATTT+CGG + chr1.3:61357354-61357373 None:intergenic 30.0%
ACGACAACTTCGTTAATAAT+AGG - chr1.3:61356528-61356547 MS.gene20876:intron 30.0%
AGAAAATAAGCCAATCCAAA+TGG + chr1.3:61353734-61353753 None:intergenic 30.0%
AGTTCTTACATTGAAGAAAC+TGG - chr1.3:61355617-61355636 MS.gene20876:CDS 30.0%
ATGAATATGTTCTTACGAGT+CGG - chr1.3:61356914-61356933 MS.gene20876:intron 30.0%
ATGATATATTCCGCTGAAAT+TGG - chr1.3:61354276-61354295 MS.gene20876:CDS 30.0%
ATGTATCATTCAAAAGCTTG+TGG + chr1.3:61353863-61353882 None:intergenic 30.0%
ATTGGCACTAAAAATTAGAG+TGG - chr1.3:61354294-61354313 MS.gene20876:CDS 30.0%
CAAAAGAAGTTGCAAATATG+GGG - chr1.3:61355193-61355212 MS.gene20876:CDS 30.0%
CGACAACTTCGTTAATAATA+GGG - chr1.3:61356529-61356548 MS.gene20876:intron 30.0%
CTGATCATTTATTATCTGAC+AGG - chr1.3:61357549-61357568 MS.gene20876:CDS 30.0%
GAAAATAAGCCAATCCAAAT+GGG + chr1.3:61353733-61353752 None:intergenic 30.0%
GAATTGTTATATAAGTGTGC+AGG - chr1.3:61354241-61354260 MS.gene20876:intron 30.0%
GTATTCTCTCATGAAGAAAA+TGG - chr1.3:61356184-61356203 MS.gene20876:CDS 30.0%
GTTCTTACATTGAAGAAACT+GGG - chr1.3:61355618-61355637 MS.gene20876:CDS 30.0%
TAATAATACTACGGATCTTG+TGG - chr1.3:61357488-61357507 MS.gene20876:CDS 30.0%
TCATTTATTATCTGACAGGT+TGG - chr1.3:61357553-61357572 MS.gene20876:CDS 30.0%
TTCATTATAGATAACCCACT+CGG + chr1.3:61356899-61356918 None:intergenic 30.0%
! AGCTAATTGTTGTCCTTTTA+TGG - chr1.3:61354362-61354381 MS.gene20876:CDS 30.0%
! CCAAAACTAAGTCTTTTTCT+AGG + chr1.3:61357025-61357044 None:intergenic 30.0%
! CCTAGAAAAAGACTTAGTTT+TGG - chr1.3:61357022-61357041 MS.gene20876:intron 30.0%
! CTAATTGTTGTCCTTTTATG+GGG - chr1.3:61354364-61354383 MS.gene20876:CDS 30.0%
! GCTAATTGTTGTCCTTTTAT+GGG - chr1.3:61354363-61354382 MS.gene20876:CDS 30.0%
! GCTTAGACAAATAGCTATTT+TGG + chr1.3:61356794-61356813 None:intergenic 30.0%
! TTTTTGAATTATGGCCCATT+TGG - chr1.3:61353716-61353735 MS.gene20876:intron 30.0%
!! GACATACTTGTTTTTCTTAC+TGG - chr1.3:61355135-61355154 MS.gene20876:CDS 30.0%
!! TCTATTTCTGCAATGTTATC+AGG - chr1.3:61355852-61355871 MS.gene20876:CDS 30.0%
!! TTGGAAGTGTTGAATTACTT+GGG - chr1.3:61355705-61355724 MS.gene20876:CDS 30.0%
!! TTTGGAAGTGTTGAATTACT+TGG - chr1.3:61355704-61355723 MS.gene20876:CDS 30.0%
!!! AAGTTTCAGGGCTATTTTTT+TGG - chr1.3:61354982-61355001 MS.gene20876:intron 30.0%
!!! ATTTTTAGTGCCAATTTCAG+CGG + chr1.3:61354289-61354308 None:intergenic 30.0%
AAAACTAACGGCGGTTTAAT+CGG - chr1.3:61353371-61353390 MS.gene20876:CDS 35.0%
AAACATCTTGATCATGTGCA+CGG + chr1.3:61356005-61356024 None:intergenic 35.0%
AAACTGCAGCCATTACTTAA+AGG + chr1.3:61353668-61353687 None:intergenic 35.0%
AACTGCAGCCATTACTTAAA+GGG + chr1.3:61353667-61353686 None:intergenic 35.0%
AATCTCATTAACCGTTGGAA+TGG - chr1.3:61353398-61353417 MS.gene20876:CDS 35.0%
ACTAAGTTCCCTTAGCATTA+TGG + chr1.3:61355925-61355944 None:intergenic 35.0%
ACTTGAAGCTGAAAAGTTTC+AGG - chr1.3:61354969-61354988 MS.gene20876:intron 35.0%
ACTTGAGTAGAAGTTAGATG+AGG + chr1.3:61357264-61357283 None:intergenic 35.0%
AGCACTTACTTAGAATCCTA+TGG + chr1.3:61356140-61356159 None:intergenic 35.0%
ATAGTCTATGTTATTGACCC+CGG - chr1.3:61355384-61355403 MS.gene20876:CDS 35.0%
ATGTTATGGGATAAGATGCT+TGG - chr1.3:61354190-61354209 MS.gene20876:intron 35.0%
CATATTTAACGATTCTGCTC+TGG - chr1.3:61356828-61356847 MS.gene20876:intron 35.0%
CTACTACGTCAACATAAGAA+AGG - chr1.3:61356646-61356665 MS.gene20876:intron 35.0%
CTATGTAGTCGTTTCATGAT+AGG - chr1.3:61354074-61354093 MS.gene20876:CDS 35.0%
CTTCAATGTAAGAACTGTGT+TGG + chr1.3:61355613-61355632 None:intergenic 35.0%
CTTGAAGCTGAAAAGTTTCA+GGG - chr1.3:61354970-61354989 MS.gene20876:intron 35.0%
CTTGAGTAGAAGTTAGATGA+GGG + chr1.3:61357263-61357282 None:intergenic 35.0%
GAAACTTCCTTGACAATTGA+TGG - chr1.3:61355360-61355379 MS.gene20876:CDS 35.0%
GAAATTACTGAAACATCTGG+TGG - chr1.3:61357353-61357372 MS.gene20876:intron 35.0%
GAAATTGATTATCACAGACG+AGG + chr1.3:61356252-61356271 None:intergenic 35.0%
GAAGAAATGGATGTGAGTAT+TGG - chr1.3:61354574-61354593 MS.gene20876:intron 35.0%
GAAGGTAACTTAACAAAGCT+TGG - chr1.3:61355741-61355760 MS.gene20876:CDS 35.0%
GAATACGTAAGCTATTGAAC+TGG - chr1.3:61357313-61357332 MS.gene20876:intron 35.0%
GAATTTCATACGTACTGTGA+CGG - chr1.3:61356936-61356955 MS.gene20876:intron 35.0%
GAGAGCCAGTAATAATACTA+CGG - chr1.3:61357479-61357498 MS.gene20876:CDS 35.0%
GTAACAATCTCATTAACCGT+TGG - chr1.3:61353393-61353412 MS.gene20876:CDS 35.0%
GTTCTCACAAACCAAAATTG+TGG - chr1.3:61353807-61353826 MS.gene20876:intron 35.0%
TAAGGGAACTTAGTTGAGTT+AGG - chr1.3:61355931-61355950 MS.gene20876:CDS 35.0%
TACCATCTGTTAGATATCTG+CGG + chr1.3:61354786-61354805 None:intergenic 35.0%
TAGTACCCAATTGCTTTATC+CGG - chr1.3:61356278-61356297 MS.gene20876:intron 35.0%
TCAGAAAGAGGATTTCTTGA+AGG - chr1.3:61353484-61353503 MS.gene20876:intron 35.0%
TCATTATAGATAACCCACTC+GGG + chr1.3:61356898-61356917 None:intergenic 35.0%
TCCGAAATTACTGAAACATC+TGG - chr1.3:61357350-61357369 MS.gene20876:intron 35.0%
TTCCAGGAACTTTCATAAGA+GGG + chr1.3:61355011-61355030 None:intergenic 35.0%
! AGAAATGGATGTGAGTATTG+GGG - chr1.3:61354576-61354595 MS.gene20876:intron 35.0%
! AGCTTATGAAGCCACAATTT+TGG + chr1.3:61353821-61353840 None:intergenic 35.0%
! AGTAAGGTTTTCCATTCCAA+CGG + chr1.3:61353412-61353431 None:intergenic 35.0%
! GCTGAAGCTAATCTGAAATT+TGG - chr1.3:61357115-61357134 MS.gene20876:intron 35.0%
! TAAAGTCTAAAGCATTTCCC+CGG + chr1.3:61355522-61355541 None:intergenic 35.0%
! TTGATTCTTGTTGGTGAAAC+TGG - chr1.3:61353527-61353546 MS.gene20876:intron 35.0%
!! AAAGATGCTTGTTGTTAGTC+CGG - chr1.3:61355803-61355822 MS.gene20876:CDS 35.0%
!! ACTTGTTTTTCTTACTGGAG+AGG - chr1.3:61355140-61355159 MS.gene20876:CDS 35.0%
!! ATCATGAGATTTTGGAGAAG+AGG - chr1.3:61353441-61353460 MS.gene20876:intron 35.0%
!! GAGTTAGGCTTCTTTTGAAA+TGG - chr1.3:61355946-61355965 MS.gene20876:CDS 35.0%
!! GGATTTCTTGAAGGTTTTGA+AGG - chr1.3:61353493-61353512 MS.gene20876:intron 35.0%
!! TAATGGCTGCAGTTTTAACA+AGG - chr1.3:61353673-61353692 MS.gene20876:intron 35.0%
!!! CTTTTTCTAGGACAACCATA+GGG + chr1.3:61357013-61357032 None:intergenic 35.0%
!!! GCAAAGGTATCATGAGATTT+TGG - chr1.3:61353433-61353452 MS.gene20876:intron 35.0%
!!! TCTTTTTCTAGGACAACCAT+AGG + chr1.3:61357014-61357033 None:intergenic 35.0%
!!! TGTGCACTAGCTTTTGATAT+TGG + chr1.3:61355468-61355487 None:intergenic 35.0%
!!! TTTTAACAAGGCGCTGATTA+GGG - chr1.3:61353685-61353704 MS.gene20876:intron 35.0%
AAAACAAGTATGTCTCCAGC+AGG + chr1.3:61355129-61355148 None:intergenic 40.0%
AAAATCTTCTGCTGCATAGC+TGG + chr1.3:61355267-61355286 None:intergenic 40.0%
AAAGCACGCATTAAGGTTTC+AGG + chr1.3:61355687-61355706 None:intergenic 40.0%
AAATCTTCTGCTGCATAGCT+GGG + chr1.3:61355266-61355285 None:intergenic 40.0%
AACCGATCTAACCCCATAAA+AGG + chr1.3:61354378-61354397 None:intergenic 40.0%
AAGATGGTCAAAACTAACGG+CGG - chr1.3:61353362-61353381 MS.gene20876:CDS 40.0%
AAGCACGCATTAAGGTTTCA+GGG + chr1.3:61355686-61355705 None:intergenic 40.0%
AAGTTCCCTTAGCATTATGG+TGG + chr1.3:61355922-61355941 None:intergenic 40.0%
ACAAGCATCTTTGACATCTG+AGG + chr1.3:61355795-61355814 None:intergenic 40.0%
AGAAGTTAGATGAGGGACTT+TGG + chr1.3:61357256-61357275 None:intergenic 40.0%
AGAGGAAAACTCTTCCTGTT+TGG - chr1.3:61353459-61353478 MS.gene20876:intron 40.0%
AGTTCCCTTAGCATTATGGT+GGG + chr1.3:61355921-61355940 None:intergenic 40.0%
ATAACCACCAACTTCAAGTC+AGG + chr1.3:61354940-61354959 None:intergenic 40.0%
ATAAGAAAGGCAATGCTAGC+AGG - chr1.3:61356659-61356678 MS.gene20876:intron 40.0%
ATCAACATTAAGGGCCTGTT+TGG + chr1.3:61353927-61353946 None:intergenic 40.0%
ATCATCTTCTTGCGCTTATC+TGG + chr1.3:61354496-61354515 None:intergenic 40.0%
ATCTGTTAGATATCTGCGGT+GGG + chr1.3:61354782-61354801 None:intergenic 40.0%
ATGGAAAACCTTACTCGCAA+AGG - chr1.3:61353417-61353436 MS.gene20876:intron 40.0%
ATTACTTGGAGGCTGCTATT+AGG - chr1.3:61355076-61355095 MS.gene20876:intron 40.0%
ATTGTAATATCCCGACCCTA+TGG - chr1.3:61356995-61357014 MS.gene20876:intron 40.0%
CAAGAAACGAGAGAAGGAAA+AGG - chr1.3:61357652-61357671 MS.gene20876:CDS 40.0%
CAAGCATCTTTGACATCTGA+GGG + chr1.3:61355794-61355813 None:intergenic 40.0%
CAATCTTTCTTTCCCCATCA+AGG + chr1.3:61357168-61357187 None:intergenic 40.0%
CTCTTATGAAAGTTCCTGGA+AGG - chr1.3:61355010-61355029 MS.gene20876:intron 40.0%
CTTCCAGGAACTTTCATAAG+AGG + chr1.3:61355012-61355031 None:intergenic 40.0%
CTTGACAGTTAAAGACAACC+AGG - chr1.3:61356724-61356743 MS.gene20876:intron 40.0%
GAATTATGGCCCATTTGGAT+TGG - chr1.3:61353721-61353740 MS.gene20876:intron 40.0%
GACTATGCCATCAATTGTCA+AGG + chr1.3:61355370-61355389 None:intergenic 40.0%
GATTATGAGTGAGTTTCCGT+TGG - chr1.3:61355767-61355786 MS.gene20876:CDS 40.0%
GCGAAGATGGTCAAAACTAA+CGG - chr1.3:61353359-61353378 MS.gene20876:CDS 40.0%
GCTTTACAAGAAACGAGAGA+AGG - chr1.3:61357646-61357665 MS.gene20876:CDS 40.0%
TAACGATTCTGCTCTGGTAT+AGG - chr1.3:61356834-61356853 MS.gene20876:intron 40.0%
TCATGATACCTTTGCGAGTA+AGG + chr1.3:61353428-61353447 None:intergenic 40.0%
TCATTCGAACAGTTGAACTC+CGG + chr1.3:61355825-61355844 None:intergenic 40.0%
TCCAGGAACTTTCATAAGAG+GGG + chr1.3:61355010-61355029 None:intergenic 40.0%
TGAAACCTTAATGCGTGCTT+TGG - chr1.3:61355686-61355705 MS.gene20876:CDS 40.0%
TGTAGTCGTTTCATGATAGG+TGG - chr1.3:61354077-61354096 MS.gene20876:CDS 40.0%
TTCTTGATGAAGCTCACGAA+AGG - chr1.3:61354860-61354879 MS.gene20876:intron 40.0%
TTGAAGATTGCAGTAGTGCA+AGG - chr1.3:61354623-61354642 MS.gene20876:CDS 40.0%
! AAACAGACCTGACTTGAAGT+TGG - chr1.3:61354930-61354949 MS.gene20876:intron 40.0%
! ACACCACAATTTTCCTTCCA+GGG + chr1.3:61355326-61355345 None:intergenic 40.0%
! ATTTGCATTTTGCCAGCTCA+AGG + chr1.3:61357050-61357069 None:intergenic 40.0%
! GCACTTACTGTTTTGCTTGT+AGG + chr1.3:61356395-61356414 None:intergenic 40.0%
! GTCCTTTTATGGGGTTAGAT+CGG - chr1.3:61354373-61354392 MS.gene20876:CDS 40.0%
! TACTGTTTTGCTTGTAGGCA+TGG + chr1.3:61356390-61356409 None:intergenic 40.0%
! TGATAATGTTCGACAACAGC+TGG - chr1.3:61356565-61356584 MS.gene20876:intron 40.0%
! TGTGCTATTCGGTCTTCTTA+AGG - chr1.3:61354897-61354916 MS.gene20876:intron 40.0%
! TTGGCTACTGATGTGCTATT+CGG - chr1.3:61354886-61354905 MS.gene20876:intron 40.0%
!! ACAGCTTCTAAAACGAACTG+AGG + chr1.3:61354460-61354479 None:intergenic 40.0%
!! CAGCTTCTAAAACGAACTGA+GGG + chr1.3:61354459-61354478 None:intergenic 40.0%
!! GCTTTTGAGAGAAGCAATGA+CGG - chr1.3:61354807-61354826 MS.gene20876:intron 40.0%
!! TGGTAGTGGAAAAACTACAC+AGG - chr1.3:61353547-61353566 MS.gene20876:intron 40.0%
!!! GTTAGTTTTGACCATCTTCG+CGG + chr1.3:61353360-61353379 None:intergenic 40.0%
!!! GTTTTAACAAGGCGCTGATT+AGG - chr1.3:61353684-61353703 MS.gene20876:intron 40.0%
!!! TTAGTTTTGGAACCTTGAGC+TGG - chr1.3:61357035-61357054 MS.gene20876:intron 40.0%
AATCTTCTGCTGCATAGCTG+GGG + chr1.3:61355265-61355284 None:intergenic 45.0%
ACAATGGCACAGCTTTCACA+GGG + chr1.3:61355230-61355249 None:intergenic 45.0%
ACCGGAAAGAGATTACTTGG+AGG - chr1.3:61355065-61355084 MS.gene20876:intron 45.0%
ACCTTCTGCTTAGCAAATCC+GGG + chr1.3:61355405-61355424 None:intergenic 45.0%
ACTTTGTATCGCTCCAAGAG+TGG + chr1.3:61354835-61354854 None:intergenic 45.0%
AGAAGGAAAAGGATGAAGCC+CGG - chr1.3:61357663-61357682 MS.gene20876:CDS 45.0%
AGAGTCCCACCATAATGCTA+AGG - chr1.3:61355913-61355932 MS.gene20876:CDS 45.0%
AGCACGCATTAAGGTTTCAG+GGG + chr1.3:61355685-61355704 None:intergenic 45.0%
AGCAGGATATTTCATGCAGG+TGG - chr1.3:61356676-61356695 MS.gene20876:intron 45.0%
AGGTCTATAACCCTCGAGTT+CGG - chr1.3:61355421-61355440 MS.gene20876:CDS 45.0%
AGTCAGTGCTGCATAACTTC+AGG + chr1.3:61356613-61356632 None:intergenic 45.0%
ATCCTATGGTACATGCCAAC+CGG + chr1.3:61356126-61356145 None:intergenic 45.0%
ATTATCACAGACGAGGTCCA+CGG + chr1.3:61356245-61356264 None:intergenic 45.0%
ATTCACATGTGTGAACCTGC+TGG - chr1.3:61355111-61355130 MS.gene20876:intron 45.0%
CAATTGCTTTATCCGGCCTA+GGG - chr1.3:61356285-61356304 MS.gene20876:intron 45.0%
CACCGCAGATATCTAACAGA+TGG - chr1.3:61354781-61354800 MS.gene20876:intron 45.0%
CACTTCCAAAGCACGCATTA+AGG + chr1.3:61355694-61355713 None:intergenic 45.0%
CAGCATTTGTTCATGTGTGC+GGG - chr1.3:61355974-61355993 MS.gene20876:CDS 45.0%
CATCAGCAGCTGTCTTCTTT+GGG - chr1.3:61356090-61356109 MS.gene20876:CDS 45.0%
CATCCATTTCTTCAGCCACA+CGG + chr1.3:61354567-61354586 None:intergenic 45.0%
CATCTGTTAGATATCTGCGG+TGG + chr1.3:61354783-61354802 None:intergenic 45.0%
CCAGCATTTGTTCATGTGTG+CGG - chr1.3:61355973-61355992 MS.gene20876:CDS 45.0%
CGCACACATGAACAAATGCT+GGG + chr1.3:61355975-61355994 None:intergenic 45.0%
CTAATTGTAGGATTGGGGCT+TGG - chr1.3:61354153-61354172 MS.gene20876:intron 45.0%
CTAGGCCGGATAAAGCAATT+GGG + chr1.3:61356286-61356305 None:intergenic 45.0%
CTTGCATCCATCAAATTGCC+TGG - chr1.3:61356864-61356883 MS.gene20876:intron 45.0%
GACCTTCTGCTTAGCAAATC+CGG + chr1.3:61355406-61355425 None:intergenic 45.0%
GAGTCCCACCATAATGCTAA+GGG - chr1.3:61355914-61355933 MS.gene20876:CDS 45.0%
GATGAAGCCAAAGCTAGGTT+TGG - chr1.3:61356325-61356344 MS.gene20876:intron 45.0%
GATGTGTCCAAACCTAGCTT+TGG + chr1.3:61356335-61356354 None:intergenic 45.0%
GCCTCCAAGTAATCTCTTTC+CGG + chr1.3:61355069-61355088 None:intergenic 45.0%
GCTAGCAGGATATTTCATGC+AGG - chr1.3:61356673-61356692 MS.gene20876:intron 45.0%
GGAACCGGAAAGAGATTACT+TGG - chr1.3:61355062-61355081 MS.gene20876:intron 45.0%
GGGGGAAGAGTAGAATACAA+TGG + chr1.3:61355246-61355265 None:intergenic 45.0%
GTTGAATTACTTGGGTGCAC+TGG - chr1.3:61355713-61355732 MS.gene20876:CDS 45.0%
TACAATGGCACAGCTTTCAC+AGG + chr1.3:61355231-61355250 None:intergenic 45.0%
TCATCAGCAGCTGTCTTCTT+TGG - chr1.3:61356089-61356108 MS.gene20876:CDS 45.0%
TCCTCTTTCTGATGCCAAAC+AGG + chr1.3:61353476-61353495 None:intergenic 45.0%
TCCTGTTTGGCATCAGAAAG+AGG - chr1.3:61353472-61353491 MS.gene20876:intron 45.0%
TCTGTTAGATATCTGCGGTG+GGG + chr1.3:61354781-61354800 None:intergenic 45.0%
TGAAGCTCACGAAAGGACTT+TGG - chr1.3:61354867-61354886 MS.gene20876:intron 45.0%
TGCTCAGTTGCACATGAATG+CGG - chr1.3:61356040-61356059 MS.gene20876:CDS 45.0%
TTGTGGTCCAGGCAATTTGA+TGG + chr1.3:61356874-61356893 None:intergenic 45.0%
TTTCAGACGAGGATGCTTCT+TGG - chr1.3:61356501-61356520 MS.gene20876:CDS 45.0%
TTTGACATCTGAGGGTCCAA+CGG + chr1.3:61355786-61355805 None:intergenic 45.0%
! ACCACAATTTTCCTTCCAGG+GGG + chr1.3:61355324-61355343 None:intergenic 45.0%
! CACCACAATTTTCCTTCCAG+GGG + chr1.3:61355325-61355344 None:intergenic 45.0%
! CTTGTTGGTGAAACTGGTAG+TGG - chr1.3:61353533-61353552 MS.gene20876:intron 45.0%
! GACACCACAATTTTCCTTCC+AGG + chr1.3:61355327-61355346 None:intergenic 45.0%
! GGGACTTTGGAAAAGACTTG+AGG + chr1.3:61357243-61357262 None:intergenic 45.0%
! TGACGGATATTCGTGGTGAA+TGG - chr1.3:61356953-61356972 MS.gene20876:intron 45.0%
! TGCAAATGGCTTTTCAGACG+AGG - chr1.3:61356490-61356509 MS.gene20876:CDS 45.0%
! TTAGCATTATGGTGGGACTC+TGG + chr1.3:61355914-61355933 None:intergenic 45.0%
!! AGTTCGGGTTGAGTCTTTGT+TGG - chr1.3:61355437-61355456 MS.gene20876:CDS 45.0%
!! TTCTAGGACAACCATAGGGT+CGG + chr1.3:61357009-61357028 None:intergenic 45.0%
!! ATTAAAAAAAAAAAAAATAG+AGG - chr1.3:61354329-61354348 MS.gene20876:CDS 5.0%
AAAGACTCAACCCGAACTCG+AGG + chr1.3:61355435-61355454 None:intergenic 50.0%
AAGACTCAACCCGAACTCGA+GGG + chr1.3:61355434-61355453 None:intergenic 50.0%
ACAACAGCTGGTGCGTATCA+TGG - chr1.3:61356577-61356596 MS.gene20876:intron 50.0%
ACACGCTTCGCTTCACATTG+TGG + chr1.3:61357617-61357636 None:intergenic 50.0%
ACGTGCTGGAAGAACTCAAC+CGG - chr1.3:61355500-61355519 MS.gene20876:CDS 50.0%
AGTTGCAAATATGGGGGACC+AGG - chr1.3:61355200-61355219 MS.gene20876:CDS 50.0%
ATCTTCTGCTGCATAGCTGG+GGG + chr1.3:61355264-61355283 None:intergenic 50.0%
ATTAAGGTTTCAGGGGCAGG+AGG + chr1.3:61355678-61355697 None:intergenic 50.0%
CAAAAGCTAGTGCACACCAG+AGG - chr1.3:61355472-61355491 MS.gene20876:CDS 50.0%
CAGTTGCACATGAATGCGGT+TGG - chr1.3:61356044-61356063 MS.gene20876:CDS 50.0%
CCAATTGCTTTATCCGGCCT+AGG - chr1.3:61356284-61356303 MS.gene20876:intron 50.0%
CCGCACACATGAACAAATGC+TGG + chr1.3:61355976-61355995 None:intergenic 50.0%
CCTAGGCCGGATAAAGCAAT+TGG + chr1.3:61356287-61356306 None:intergenic 50.0%
CCTTCTGCTTAGCAAATCCG+GGG + chr1.3:61355404-61355423 None:intergenic 50.0%
CGATTCTGCTCTGGTATAGG+TGG - chr1.3:61356837-61356856 MS.gene20876:intron 50.0%
CTGTTAGATATCTGCGGTGG+GGG + chr1.3:61354780-61354799 None:intergenic 50.0%
GCCCCTCTTATGAAAGTTCC+TGG - chr1.3:61355006-61355025 MS.gene20876:intron 50.0%
GCTAGGTTTGGACACATCGA+TGG - chr1.3:61356337-61356356 MS.gene20876:intron 50.0%
GCTGCTGATGACTACCTAAC+TGG + chr1.3:61356080-61356099 None:intergenic 50.0%
GGTCTATAACCCTCGAGTTC+GGG - chr1.3:61355422-61355441 MS.gene20876:CDS 50.0%
TCCTATGGTACATGCCAACC+GGG + chr1.3:61356125-61356144 None:intergenic 50.0%
TTAAGGTTTCAGGGGCAGGA+GGG + chr1.3:61355677-61355696 None:intergenic 50.0%
TTGCACATGAATGCGGTTGG+TGG - chr1.3:61356047-61356066 MS.gene20876:CDS 50.0%
TTGGGTGCACTGGATGATGA+AGG - chr1.3:61355723-61355742 MS.gene20876:CDS 50.0%
TTGGTGGAGTGTGTCCAGTT+AGG - chr1.3:61356063-61356082 MS.gene20876:CDS 50.0%
! CAGACCTGACTTGAAGTTGG+TGG - chr1.3:61354933-61354952 MS.gene20876:intron 50.0%
! CCACAATTTTCCTTCCAGGG+GGG + chr1.3:61355323-61355342 None:intergenic 50.0%
! TAGGGAGGCACAAAAAGCTG+CGG - chr1.3:61356303-61356322 MS.gene20876:intron 50.0%
! TCTAGGACAACCATAGGGTC+GGG + chr1.3:61357008-61357027 None:intergenic 50.0%
!! AGCAATGACGGATCCACTCT+TGG - chr1.3:61354819-61354838 MS.gene20876:intron 50.0%
!! CGTACTGTGACGGATATTCG+TGG - chr1.3:61356946-61356965 MS.gene20876:intron 50.0%
!! GGATGTGAGTATTGGGGAAG+AGG - chr1.3:61354582-61354601 MS.gene20876:intron 50.0%
!! GTGAGTATTGGGGAAGAGGT+TGG - chr1.3:61354586-61354605 MS.gene20876:intron 50.0%
ACGCCGTGTGGCTGAAGAAA+TGG - chr1.3:61354561-61354580 MS.gene20876:intron 55.0%
AGATAACCCACTCGGGCTTG+TGG + chr1.3:61356891-61356910 None:intergenic 55.0%
AGCTCCACCTCCAGTTAAGG+AGG - chr1.3:61355293-61355312 MS.gene20876:CDS 55.0%
AGCTGGTGCGTATCATGGCT+AGG - chr1.3:61356582-61356601 MS.gene20876:intron 55.0%
CACACGGCGTGAAACAGACA+TGG + chr1.3:61354551-61354570 None:intergenic 55.0%
CATCTGCTGACCTTCTTCCG+TGG - chr1.3:61356225-61356244 MS.gene20876:intron 55.0%
CATGTCTGTTTCACGCCGTG+TGG - chr1.3:61354549-61354568 MS.gene20876:intron 55.0%
CCCCCCTGGAAGGAAAATTG+TGG - chr1.3:61355320-61355339 MS.gene20876:CDS 55.0%
CCTATGGTACATGCCAACCG+GGG + chr1.3:61356124-61356143 None:intergenic 55.0%
CGCATTAAGGTTTCAGGGGC+AGG + chr1.3:61355681-61355700 None:intergenic 55.0%
CGTGCTGGAAGAACTCAACC+GGG - chr1.3:61355501-61355520 MS.gene20876:CDS 55.0%
CTATGGTACATGCCAACCGG+GGG + chr1.3:61356123-61356142 None:intergenic 55.0%
CTGCGGATGAAGCCAAAGCT+AGG - chr1.3:61356320-61356339 MS.gene20876:intron 55.0%
GACATGGCAGCTACTCTACG+AGG + chr1.3:61354535-61354554 None:intergenic 55.0%
GCAAATATGGGGGACCAGGT+GGG - chr1.3:61355204-61355223 MS.gene20876:CDS 55.0%
GCTCCACCTCCAGTTAAGGA+GGG - chr1.3:61355294-61355313 MS.gene20876:CDS 55.0%
GGAGGCTGCTATTAGGACAG+TGG - chr1.3:61355083-61355102 MS.gene20876:intron 55.0%
GGGTACAGAGAGGAAGAGGA+AGG - chr1.3:61353304-61353323 MS.gene20876:CDS 55.0%
GTGCTGGAAGAACTCAACCG+GGG - chr1.3:61355502-61355521 MS.gene20876:CDS 55.0%
TCCTTAACTGGAGGTGGAGC+TGG + chr1.3:61355294-61355313 None:intergenic 55.0%
TGCAAATATGGGGGACCAGG+TGG - chr1.3:61355203-61355222 MS.gene20876:CDS 55.0%
TTGCTTTATCCGGCCTAGGG+AGG - chr1.3:61356288-61356307 MS.gene20876:intron 55.0%
! CTTTTTGTGCCTCCCTAGGC+CGG + chr1.3:61356300-61356319 None:intergenic 55.0%
! GCAGCTTTTTGTGCCTCCCT+AGG + chr1.3:61356304-61356323 None:intergenic 55.0%
! TTCTTTGGGTTCCATGCCCC+CGG - chr1.3:61356104-61356123 MS.gene20876:CDS 55.0%
!! CCCCGGATTTGCTAAGCAGA+AGG - chr1.3:61355401-61355420 MS.gene20876:CDS 55.0%
CAGACGAGGTCCACGGAAGA+AGG + chr1.3:61356238-61356257 None:intergenic 60.0%
CCACCTCCAGTTAAGGAGGG+AGG - chr1.3:61355297-61355316 MS.gene20876:CDS 60.0%
CCCCGGTTGGCATGTACCAT+AGG - chr1.3:61356121-61356140 MS.gene20876:CDS 60.0%
CCTCCCTCCTTAACTGGAGG+TGG + chr1.3:61355300-61355319 None:intergenic 60.0%
GCCAGCTCCACCTCCAGTTA+AGG - chr1.3:61355290-61355309 MS.gene20876:CDS 60.0%
GCTAGTGCACACCAGAGGTC+TGG - chr1.3:61355477-61355496 MS.gene20876:CDS 60.0%
GGCAGCTACTCTACGAGGCT+GGG + chr1.3:61354530-61354549 None:intergenic 60.0%
GTGGCTCATCTTGAGCGCAC+AGG - chr1.3:61356695-61356714 MS.gene20876:intron 60.0%
TCCACTGGATGCAGCCTTCC+AGG + chr1.3:61355027-61355046 None:intergenic 60.0%
TCCTGGAAGGCTGCATCCAG+TGG - chr1.3:61355023-61355042 MS.gene20876:intron 60.0%
TGGCAGCTACTCTACGAGGC+TGG + chr1.3:61354531-61354550 None:intergenic 60.0%
TTCCAGCACGTCCAGACCTC+TGG + chr1.3:61355491-61355510 None:intergenic 60.0%
CACCAGAGGTCTGGACGTGC+TGG - chr1.3:61355486-61355505 MS.gene20876:CDS 65.0%
CAGCTTTCACAGGGCCCACC+TGG + chr1.3:61355221-61355240 None:intergenic 65.0%
CCTGGACCACAAGCCCGAGT+GGG - chr1.3:61356882-61356901 MS.gene20876:intron 65.0%
GGGCCTCCCTCCTTAACTGG+AGG + chr1.3:61355303-61355322 None:intergenic 65.0%
GTACATGCCAACCGGGGGCA+TGG + chr1.3:61356118-61356137 None:intergenic 65.0%
TTGGGTTCCATGCCCCCGGT+TGG - chr1.3:61356108-61356127 MS.gene20876:CDS 65.0%
CCCACTCGGGCTTGTGGTCC+AGG + chr1.3:61356885-61356904 None:intergenic 70.0%
CGACGACGCTGCCGCGAAGA+TGG - chr1.3:61353346-61353365 MS.gene20876:CDS 70.0%
GCCTGGACCACAAGCCCGAG+TGG - chr1.3:61356881-61356900 MS.gene20876:intron 70.0%
GGGGGGCCTCCCTCCTTAAC+TGG + chr1.3:61355306-61355325 None:intergenic 70.0%
GTTAAGGAGGGAGGCCCCCC+TGG - chr1.3:61355306-61355325 MS.gene20876:CDS 70.0%
AGGAGGGAGGCCCCCCTGGA+AGG - chr1.3:61355310-61355329 MS.gene20876:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 61353302 61357697 61353302 ID=MS.gene20876
chr1.3 mRNA 61353302 61357697 61353302 ID=MS.gene20876.t1;Parent=MS.gene20876
chr1.3 exon 61357431 61357697 61357431 ID=MS.gene20876.t1.exon1;Parent=MS.gene20876.t1
chr1.3 CDS 61357431 61357697 61357431 ID=cds.MS.gene20876.t1;Parent=MS.gene20876.t1
chr1.3 exon 61356343 61356545 61356343 ID=MS.gene20876.t1.exon2;Parent=MS.gene20876.t1
chr1.3 CDS 61356343 61356545 61356343 ID=cds.MS.gene20876.t1;Parent=MS.gene20876.t1
chr1.3 exon 61355126 61356210 61355126 ID=MS.gene20876.t1.exon3;Parent=MS.gene20876.t1
chr1.3 CDS 61355126 61356210 61355126 ID=cds.MS.gene20876.t1;Parent=MS.gene20876.t1
chr1.3 exon 61354593 61354718 61354593 ID=MS.gene20876.t1.exon4;Parent=MS.gene20876.t1
chr1.3 CDS 61354593 61354718 61354593 ID=cds.MS.gene20876.t1;Parent=MS.gene20876.t1
chr1.3 exon 61354254 61354492 61354254 ID=MS.gene20876.t1.exon5;Parent=MS.gene20876.t1
chr1.3 CDS 61354254 61354492 61354254 ID=cds.MS.gene20876.t1;Parent=MS.gene20876.t1
chr1.3 exon 61354025 61354143 61354025 ID=MS.gene20876.t1.exon6;Parent=MS.gene20876.t1
chr1.3 CDS 61354025 61354143 61354025 ID=cds.MS.gene20876.t1;Parent=MS.gene20876.t1
chr1.3 exon 61353302 61353428 61353302 ID=MS.gene20876.t1.exon7;Parent=MS.gene20876.t1
chr1.3 CDS 61353302 61353428 61353302 ID=cds.MS.gene20876.t1;Parent=MS.gene20876.t1
Gene Sequence

>MS.gene20876

ATGGGTACAGAGAGGAAGAGGAAGGTGAGTTTATTCGACGTCGTCGACGACGCTGCCGCGAAGATGGTCAAAACTAACGGCGGTTTAATCGGTAACAATCTCATTAACCGTTGGAATGGAAAACCTTACTCGCAAAGGTATCATGAGATTTTGGAGAAGAGGAAAACTCTTCCTGTTTGGCATCAGAAAGAGGATTTCTTGAAGGTTTTGAAGGATAATCAGACTTTGATTCTTGTTGGTGAAACTGGTAGTGGAAAAACTACACAGGTTTGTTTCAAAGATTTTACTTCGTTTTGTTGTTATTTGGTTATGTTTAGATCATTTTGGAAATAACTGATTAATGAATAAACCATAGATTTAATCCCTTTAAGTAATGGCTGCAGTTTTAACAAGGCGCTGATTAGGGTTTATATGTTTTTGAATTATGGCCCATTTGGATTGGCTTATTTTCTAGCTTATGAAAAATAGCTTATGCAAATAAATATGGTTTTATTTTAATTCATAAGTTCTCACAAACCAAAATTGTGGCTTCATAAGCTGATTTTTCATAAACTACATCCACAAGCTTTTGAATGATACATAAAAGCTTATTTATTTGCATAAGCTACAAAAATAAGTCAATCCAAACAGGCCCTTAATGTTGATACCTTAAGTAGTACCTAAGTATATGAAATCCATTAATTTAGTTCCTAAACTATACAAAATCATATATAAACACAAACTAAAAATTATATGAACACTAATTGGCGTTGTGTTTAAAATGCAGTCATTACTATGTAGTCGTTTCATGATAGGTGGTGATATTTTTAGCTCAATTTAGCACTAAAAATTGAAGTTAATGAAGTAAAAAGCTAATTGTAGGATTGGGGCTTGGAGTGAATACTAGATATGTTATGGGATAAGATGCTTGGAGTGAATACTAGATATCTTATGGGATAAGAATTGTTATATAAGTGTGCAGGTTTCTAATATTGATGATATATTCCGCTGAAATTGGCACTAAAAATTAGAGTGGAATTGTATATATATTAAAAAAAAAAAAAATAGAGGAGAATTTGGTAGCTAATTGTTGTCCTTTTATGGGGTTAGATCGGTTATTTAAGTTTGTAATTTGCTAATTTAATTTCTTTGGTGTGTAATTTTGGGTGACAGATCCCTCAGTTCGTTTTAGAAGCTGTTGACTTAGAGACTCCAGATAAGCGCAAGAAGATGATGATTGCATGCACCCAGCCTCGTAGAGTAGCTGCCATGTCTGTTTCACGCCGTGTGGCTGAAGAAATGGATGTGAGTATTGGGGAAGAGGTTGGTTATAGCATCAGATTTGAAGATTGCAGTAGTGCAAGGACAGTTTTGAAGTATGTTTTATTTTTCCTTGAAATTACGTTGTGTAATTGATTTGAAGCTCATTGTTATACTATTTTTACATTAAATTGTTTTCCCCATCTCTTTTATTCTGAAATGTAATGTTTTTTGCTCCCCCACCGCAGATATCTAACAGATGGTATGCTTTTGAGAGAAGCAATGACGGATCCACTCTTGGAGCGATACAAAGTAATAATTCTTGATGAAGCTCACGAAAGGACTTTGGCTACTGATGTGCTATTCGGTCTTCTTAAGGAAGTTCTTAAAAACAGACCTGACTTGAAGTTGGTGGTTATGAGTGCAACACTTGAAGCTGAAAAGTTTCAGGGCTATTTTTTTGGTGCCCCTCTTATGAAAGTTCCTGGAAGGCTGCATCCAGTGGAAATTTTTTATACTCAGGAACCGGAAAGAGATTACTTGGAGGCTGCTATTAGGACAGTGGTGCAGATTCACATGTGTGAACCTGCTGGAGACATACTTGTTTTTCTTACTGGAGAGGAAGAGATAGAAGATGCATGCCGCAAAATATCAAAAGAAGTTGCAAATATGGGGGACCAGGTGGGCCCTGTGAAAGCTGTGCCATTGTATTCTACTCTTCCCCCAGCTATGCAGCAGAAGATTTTTGAGCCAGCTCCACCTCCAGTTAAGGAGGGAGGCCCCCCTGGAAGGAAAATTGTGGTGTCAACAAACATAGCAGAAACTTCCTTGACAATTGATGGCATAGTCTATGTTATTGACCCCGGATTTGCTAAGCAGAAGGTCTATAACCCTCGAGTTCGGGTTGAGTCTTTGTTGGTGTCTCCAATATCAAAAGCTAGTGCACACCAGAGGTCTGGACGTGCTGGAAGAACTCAACCGGGGAAATGCTTTAGACTTTATACCGAAAGAAGTTTCAATAATGATCTTCAGCCGCAGACTTATCCTGAAATTTTGAGATCTAATCTCGCCAACACAGTTCTTACATTGAAGAAACTGGGCATAGATGATTTAGTTCATTTTGACTTCATGGACCCTCCTGCCCCTGAAACCTTAATGCGTGCTTTGGAAGTGTTGAATTACTTGGGTGCACTGGATGATGAAGGTAACTTAACAAAGCTTGGTGAGATTATGAGTGAGTTTCCGTTGGACCCTCAGATGTCAAAGATGCTTGTTGTTAGTCCGGAGTTCAACTGTTCGAATGAGATTCTTTCTATTTCTGCAATGTTATCAGGTATGATTCTTTTCTATTATTATTGCTTTGTGTCTGTCCAGAGTCCCACCATAATGCTAAGGGAACTTAGTTGAGTTAGGCTTCTTTTGAAATGGAAGCCCAGCATTTGTTCATGTGTGCGGGCAATGCCGTGCACATGATCAAGATGTTTAACTGCTTACATGTGTGCTCAGTTGCACATGAATGCGGTTGGTGGAGTGTGTCCAGTTAGGTAGTCATCAGCAGCTGTCTTCTTTGGGTTCCATGCCCCCGGTTGGCATGTACCATAGGATTCTAAGTAAGTGCTGATGCAGATAGTTGCAGTTTCTCAGTATTCTCTCATGAAGAAAATGGTGTGCTCTCGACTCTATGCATCTGCTGACCTTCTTCCGTGGACCTCGTCTGTGATAATCAATTTCTTTCTTTAGTACCCAATTGCTTTATCCGGCCTAGGGAGGCACAAAAAGCTGCGGATGAAGCCAAAGCTAGGTTTGGACACATCGATGGAGATCATCTCACACTCTTGAATGTATACCATGCCTACAAGCAAAACAGTAAGTGCATACTCCTACTTTTTTTCATTTTATTCTCAATCTTGCTGTTTATTTTTTTTCTGATTGGAAGTTTATTAAATGTATGCAAATGGCTTTTCAGACGAGGATGCTTCTTGGTGCTACGACAACTTCGTTAATAATAGGGCGCTTAAATCAGCTGATAATGTTCGACAACAGCTGGTGCGTATCATGGCTAGGTTTAACCTGAAGTTATGCAGCACTGACTTCAATAGTCGCGACTACTACGTCAACATAAGAAAGGCAATGCTAGCAGGATATTTCATGCAGGTGGCTCATCTTGAGCGCACAGGACACTACTTGACAGTTAAAGACAACCAGGTTTGCTAAATTGATTTATATTCCTCTGTTTTTCATTTTGTATTGCCAAAATAGCTATTTGTCTAAGCCGAAGATTTGCATTCATATTTAACGATTCTGCTCTGGTATAGGTGGTACACTTGCATCCATCAAATTGCCTGGACCACAAGCCCGAGTGGGTTATCTATAATGAATATGTTCTTACGAGTCGGAATTTCATACGTACTGTGACGGATATTCGTGGTGAATGGTAAGATTTTATTGTTGTAAATTGTAATATCCCGACCCTATGGTTGTCCTAGAAAAAGACTTAGTTTTGGAACCTTGAGCTGGCAAAATGCAAATTATTTTTATATGATATTTACTGGGATACTTGTGTTCAGTAAAAATGCTGAAGCTAATCTGAAATTTGGACCTAGTTTAGATAAAAAAATTACAAGCCTTGATGGGGAAAGAAAGATTGATTTCATTTTAAGTGTTCGAGCTTCTAGCAGAACTTTAAATCAGTTTGTATACCTCAAGTCTTTTCCAAAGTCCCTCATCTAACTTCTACTCAAGTACCTAAATATTTTTAATTAGTTGGAAAATGAATACGTAAGCTATTGAACTGGACCATTGTTTATAATCCGAAATTACTGAAACATCTGGTGGTAATTCTTATCATGAATTAACTTGAGTATATTAAGTGCAGAAGTAGACACAATTTGTTATTTTGAATTCTACTCATTACTATGGATCTAATGTTGCAAGACAAGAGAGCCAGTAATAATACTACGGATCTTGTGGTTCTTGTTTTCATTGATGTTATTGAGATGTACTTAACTCTGATCATTTATTATCTGACAGGTTGGTTGATATAGCACCACATTACTATGATTTGTCTAATTTTCCACAATGTGAAGCGAAGCGTGTTCTTGAAAAGCTTTACAAGAAACGAGAGAAGGAAAAGGATGAAGCCCGGAATCGTAAATGA
Protein sequence

>MS.gene20876.t1

MGTERKRKVSLFDVVDDAAAKMVKTNGGLIGNNLINRWNGKPYSQRYHEILEKRKTLPVWHQKEDFLKVLKDNQTLILVGETGSGKTTQIPQFVLEAVDLETPDKRKKMMIACTQPRRVAAMSVSRRVAEEMDVSIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFFGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKISKEVANMGDQVGPVKAVPLYSTLPPAMQQKIFEPAPPPVKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCFIRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDASWCYDNFVNNRALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCEAKRVLEKLYKKREKEKDEARNRK