Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006750.t1 | XP_003607679.2 | 98.9 | 435 | 5 | 0 | 1 | 435 | 1 | 435 | 4.30E-254 | 886.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006750.t1 | Q9CXF4 | 31.2 | 298 | 147 | 6 | 29 | 323 | 294 | 536 | 1.5e-32 | 142.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006750.t1 | G7JF10 | 98.9 | 435 | 5 | 0 | 1 | 435 | 1 | 435 | 3.1e-254 | 886.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006750 | MS.gene031553 | PPI |
| MS.gene22482 | MS.gene006750 | PPI |
| MS.gene96829 | MS.gene006750 | PPI |
| MS.gene061932 | MS.gene006750 | PPI |
| MS.gene007486 | MS.gene006750 | PPI |
| MS.gene87295 | MS.gene006750 | PPI |
| MS.gene069825 | MS.gene006750 | PPI |
| MS.gene006750 | MS.gene09785 | PPI |
| MS.gene006750 | MS.gene007485 | PPI |
| MS.gene031553 | MS.gene006750 | PPI |
| MS.gene69823 | MS.gene006750 | PPI |
| MS.gene007487 | MS.gene006750 | PPI |
| MS.gene018518 | MS.gene006750 | PPI |
| MS.gene031556 | MS.gene006750 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006750.t1 | MTR_4g081110 | 98.624 | 436 | 6 | 0 | 1 | 436 | 1 | 436 | 0.0 | 904 |
| MS.gene006750.t1 | MTR_2g083220 | 76.126 | 444 | 98 | 4 | 1 | 437 | 1 | 443 | 0.0 | 709 |
| MS.gene006750.t1 | MTR_1g069705 | 54.670 | 439 | 167 | 5 | 1 | 435 | 12 | 422 | 8.54e-177 | 501 |
| MS.gene006750.t1 | MTR_2g099185 | 46.114 | 193 | 101 | 2 | 151 | 343 | 340 | 529 | 1.87e-49 | 178 |
| MS.gene006750.t1 | MTR_2g099185 | 36.275 | 102 | 62 | 2 | 29 | 127 | 37 | 138 | 1.64e-11 | 66.6 |
| MS.gene006750.t1 | MTR_2g099185 | 46.199 | 171 | 91 | 1 | 151 | 321 | 340 | 509 | 2.74e-44 | 162 |
| MS.gene006750.t1 | MTR_2g099185 | 36.275 | 102 | 62 | 2 | 29 | 127 | 37 | 138 | 1.84e-11 | 66.2 |
| MS.gene006750.t1 | MTR_2g099185 | 45.977 | 174 | 93 | 1 | 151 | 324 | 345 | 517 | 4.34e-44 | 161 |
| MS.gene006750.t1 | MTR_2g099185 | 37.255 | 102 | 61 | 2 | 29 | 127 | 42 | 143 | 4.38e-12 | 68.2 |
| MS.gene006750.t1 | MTR_4g115090 | 30.342 | 234 | 113 | 4 | 184 | 415 | 434 | 619 | 1.33e-31 | 127 |
| MS.gene006750.t1 | MTR_3g092100 | 32.203 | 236 | 132 | 4 | 200 | 435 | 338 | 545 | 1.11e-30 | 124 |
| MS.gene006750.t1 | MTR_3g092100 | 35.507 | 138 | 72 | 4 | 28 | 163 | 64 | 186 | 5.38e-15 | 77.4 |
| MS.gene006750.t1 | MTR_1g007590 | 29.741 | 232 | 131 | 4 | 202 | 429 | 290 | 493 | 3.17e-29 | 119 |
| MS.gene006750.t1 | MTR_1g007590 | 29.741 | 232 | 131 | 4 | 202 | 429 | 385 | 588 | 4.92e-29 | 120 |
| MS.gene006750.t1 | MTR_1g007590 | 43.038 | 79 | 43 | 1 | 35 | 111 | 68 | 146 | 2.88e-14 | 75.1 |
| MS.gene006750.t1 | MTR_1g072400 | 56.140 | 57 | 25 | 0 | 196 | 252 | 47 | 103 | 6.77e-20 | 84.7 |
| MS.gene006750.t1 | MTR_3g083840 | 26.298 | 289 | 180 | 9 | 54 | 322 | 96 | 371 | 1.74e-19 | 90.5 |
| MS.gene006750.t1 | MTR_8g085300 | 27.682 | 289 | 176 | 9 | 54 | 322 | 107 | 382 | 4.34e-18 | 86.7 |
| MS.gene006750.t1 | MTR_5g065510 | 44.444 | 72 | 39 | 1 | 30 | 100 | 21 | 92 | 1.08e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006750.t1 | AT4G27100 | 70.362 | 442 | 116 | 5 | 1 | 436 | 1 | 433 | 0.0 | 617 |
| MS.gene006750.t1 | AT4G27100 | 70.682 | 440 | 114 | 5 | 1 | 434 | 1 | 431 | 0.0 | 616 |
| MS.gene006750.t1 | AT5G54780 | 70.602 | 432 | 107 | 4 | 1 | 424 | 1 | 420 | 0.0 | 602 |
| MS.gene006750.t1 | AT2G20440 | 56.036 | 439 | 171 | 6 | 1 | 438 | 7 | 424 | 2.71e-180 | 510 |
| MS.gene006750.t1 | AT2G20440 | 56.036 | 439 | 171 | 6 | 1 | 438 | 7 | 424 | 2.71e-180 | 510 |
| MS.gene006750.t1 | AT4G28550 | 55.300 | 434 | 172 | 4 | 1 | 433 | 7 | 419 | 1.32e-177 | 503 |
| MS.gene006750.t1 | AT2G20440 | 58.951 | 324 | 112 | 4 | 1 | 322 | 7 | 311 | 7.81e-139 | 402 |
| MS.gene006750.t1 | AT4G28550 | 58.255 | 321 | 115 | 3 | 1 | 320 | 7 | 309 | 5.09e-137 | 397 |
| MS.gene006750.t1 | AT4G28550 | 58.075 | 322 | 116 | 3 | 1 | 321 | 7 | 310 | 2.38e-136 | 395 |
| MS.gene006750.t1 | AT2G20440 | 54.103 | 329 | 130 | 5 | 110 | 438 | 1 | 308 | 9.03e-124 | 362 |
| MS.gene006750.t1 | AT3G59570 | 34.743 | 331 | 169 | 4 | 151 | 435 | 336 | 665 | 1.93e-54 | 193 |
| MS.gene006750.t1 | AT3G59570 | 39.048 | 105 | 63 | 1 | 16 | 119 | 31 | 135 | 1.50e-15 | 79.3 |
| MS.gene006750.t1 | AT2G43490 | 52.410 | 166 | 78 | 1 | 166 | 331 | 347 | 511 | 1.12e-50 | 183 |
| MS.gene006750.t1 | AT2G43490 | 35.385 | 130 | 81 | 2 | 19 | 145 | 34 | 163 | 3.09e-16 | 81.6 |
| MS.gene006750.t1 | AT2G43490 | 52.410 | 166 | 78 | 1 | 166 | 331 | 347 | 511 | 1.12e-50 | 183 |
| MS.gene006750.t1 | AT2G43490 | 35.385 | 130 | 81 | 2 | 19 | 145 | 34 | 163 | 3.09e-16 | 81.6 |
| MS.gene006750.t1 | AT2G43490 | 52.410 | 166 | 78 | 1 | 166 | 331 | 347 | 511 | 1.12e-50 | 183 |
| MS.gene006750.t1 | AT2G43490 | 35.385 | 130 | 81 | 2 | 19 | 145 | 34 | 163 | 3.09e-16 | 81.6 |
| MS.gene006750.t1 | AT2G43490 | 52.410 | 166 | 78 | 1 | 166 | 331 | 347 | 511 | 1.12e-50 | 183 |
| MS.gene006750.t1 | AT2G43490 | 35.385 | 130 | 81 | 2 | 19 | 145 | 34 | 163 | 3.09e-16 | 81.6 |
| MS.gene006750.t1 | AT2G43490 | 52.410 | 166 | 78 | 1 | 166 | 331 | 343 | 507 | 1.23e-50 | 182 |
| MS.gene006750.t1 | AT2G43490 | 37.903 | 124 | 74 | 2 | 25 | 145 | 36 | 159 | 3.71e-17 | 84.3 |
| MS.gene006750.t1 | AT2G43490 | 52.410 | 166 | 78 | 1 | 166 | 331 | 343 | 507 | 1.23e-50 | 182 |
| MS.gene006750.t1 | AT2G43490 | 37.903 | 124 | 74 | 2 | 25 | 145 | 36 | 159 | 3.71e-17 | 84.3 |
| MS.gene006750.t1 | AT2G43490 | 52.410 | 166 | 78 | 1 | 166 | 331 | 347 | 511 | 1.33e-50 | 182 |
| MS.gene006750.t1 | AT2G43490 | 35.385 | 130 | 81 | 2 | 19 | 145 | 34 | 163 | 3.37e-16 | 81.6 |
| MS.gene006750.t1 | AT2G43490 | 52.410 | 166 | 78 | 1 | 166 | 331 | 347 | 511 | 1.70e-50 | 182 |
| MS.gene006750.t1 | AT2G43490 | 35.385 | 130 | 81 | 2 | 19 | 145 | 34 | 163 | 2.64e-16 | 82.0 |
| MS.gene006750.t1 | AT3G59570 | 48.876 | 178 | 90 | 1 | 151 | 328 | 336 | 512 | 6.22e-49 | 177 |
| MS.gene006750.t1 | AT3G59570 | 38.318 | 107 | 65 | 1 | 14 | 119 | 29 | 135 | 1.74e-15 | 79.3 |
| MS.gene006750.t1 | AT3G59570 | 48.876 | 178 | 90 | 1 | 151 | 328 | 336 | 512 | 1.11e-48 | 177 |
| MS.gene006750.t1 | AT3G59570 | 39.048 | 105 | 63 | 1 | 16 | 119 | 31 | 135 | 1.72e-15 | 79.3 |
| MS.gene006750.t1 | AT5G24390 | 29.124 | 388 | 178 | 9 | 28 | 324 | 56 | 437 | 1.84e-41 | 154 |
| MS.gene006750.t1 | AT5G52580 | 29.882 | 338 | 170 | 7 | 1 | 335 | 336 | 609 | 3.04e-39 | 150 |
| MS.gene006750.t1 | AT5G52580 | 30.263 | 304 | 153 | 6 | 35 | 335 | 345 | 592 | 1.95e-38 | 147 |
| MS.gene006750.t1 | AT5G52580 | 30.263 | 304 | 153 | 6 | 35 | 335 | 351 | 598 | 2.00e-38 | 147 |
| MS.gene006750.t1 | AT5G41940 | 31.797 | 217 | 120 | 3 | 202 | 418 | 345 | 533 | 1.65e-30 | 124 |
| MS.gene006750.t1 | AT5G41940 | 43.750 | 80 | 43 | 1 | 33 | 110 | 87 | 166 | 7.05e-14 | 73.9 |
| MS.gene006750.t1 | AT3G49350 | 28.814 | 236 | 140 | 4 | 202 | 437 | 330 | 537 | 3.16e-28 | 117 |
| MS.gene006750.t1 | AT5G53570 | 29.876 | 241 | 135 | 5 | 202 | 438 | 338 | 548 | 9.29e-28 | 116 |
| MS.gene006750.t1 | AT5G53570 | 40.698 | 86 | 48 | 2 | 34 | 117 | 95 | 179 | 1.02e-12 | 70.5 |
| MS.gene006750.t1 | AT5G53570 | 29.876 | 241 | 135 | 5 | 202 | 438 | 365 | 575 | 1.05e-27 | 116 |
| MS.gene006750.t1 | AT5G53570 | 40.698 | 86 | 48 | 2 | 34 | 117 | 122 | 206 | 1.01e-12 | 70.5 |
| MS.gene006750.t1 | AT1G04830 | 27.562 | 283 | 169 | 9 | 66 | 329 | 125 | 390 | 3.53e-20 | 92.8 |
| MS.gene006750.t1 | AT1G04830 | 27.562 | 283 | 169 | 9 | 66 | 329 | 125 | 390 | 5.25e-20 | 92.4 |
| MS.gene006750.t1 | AT4G13730 | 26.182 | 275 | 161 | 8 | 68 | 324 | 131 | 381 | 6.68e-19 | 89.0 |
| MS.gene006750.t1 | AT4G13730 | 26.132 | 287 | 175 | 8 | 68 | 333 | 131 | 401 | 7.82e-19 | 88.6 |
| MS.gene006750.t1 | AT4G13730 | 26.619 | 278 | 167 | 8 | 68 | 324 | 131 | 392 | 1.01e-18 | 88.6 |
Find 103 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGAATTTGTCAAAATTA+TGG | 0.149953 | 4.1:-25700841 | MS.gene006750:CDS |
| ACCTTCTTTGCTGAATTATT+AGG | 0.178371 | 4.1:+25701108 | None:intergenic |
| ATGATGAAGCTGATGCTTTC+TGG | 0.239321 | 4.1:-25700572 | MS.gene006750:CDS |
| ATTCTCTCCGGAAGGGTATT+TGG | 0.245895 | 4.1:-25701784 | MS.gene006750:CDS |
| CCTATATGTTGATGAAGTTT+TGG | 0.247721 | 4.1:+25700200 | None:intergenic |
| CCTTCTTTGCTGAATTATTA+GGG | 0.257114 | 4.1:+25701109 | None:intergenic |
| ATGTTCCCAAGTCTAGATTT+AGG | 0.276545 | 4.1:-25702492 | MS.gene006750:CDS |
| TTAGAAAATAATCCAGAAAA+TGG | 0.279307 | 4.1:-25701168 | MS.gene006750:CDS |
| AATATGATCCCAACATGTTT+TGG | 0.285195 | 4.1:-25699594 | MS.gene006750:CDS |
| CATCAATTAGAGGAGAAGTT+TGG | 0.289829 | 4.1:-25701519 | MS.gene006750:CDS |
| AGAGACTCAACTAAACAATT+TGG | 0.302514 | 4.1:-25700246 | MS.gene006750:CDS |
| CAAACTTCTCCTCTAATTGA+TGG | 0.303432 | 4.1:+25701520 | None:intergenic |
| CTGTGATTCATTGTACCTTT+GGG | 0.309545 | 4.1:-25699924 | MS.gene006750:CDS |
| AGAGAATTTGTCAAAATTAT+GGG | 0.312562 | 4.1:-25700840 | MS.gene006750:CDS |
| AGCAACAAGGAAAATAGATA+TGG | 0.322455 | 4.1:+25699444 | None:intergenic |
| TCTGTGATTCATTGTACCTT+TGG | 0.322700 | 4.1:-25699925 | MS.gene006750:CDS |
| CATCTAGGCCTCGTGCTTGC+TGG | 0.325598 | 4.1:+25699389 | None:intergenic |
| TTTGCTGAATTATTAGGGCT+TGG | 0.351259 | 4.1:+25701114 | None:intergenic |
| CGCCAACTGTTTCCTCTTGT+AGG | 0.353650 | 4.1:-25701261 | MS.gene006750:CDS |
| TTGGGAACATCGGTGCATTC+CGG | 0.361184 | 4.1:+25702505 | None:intergenic |
| TTAAAGTCAATACGTCATTA+TGG | 0.362574 | 4.1:-25699526 | MS.gene006750:CDS |
| TGGGAACATCGGTGCATTCC+GGG | 0.368119 | 4.1:+25702506 | None:intergenic |
| CAGTTACCCCACGGTGGATT+CGG | 0.379343 | 4.1:+25701742 | None:intergenic |
| ATCAATTAGAGGAGAAGTTT+GGG | 0.387602 | 4.1:-25701518 | MS.gene006750:CDS |
| GAGAGAGAGAATATGAGAAA+TGG | 0.394621 | 4.1:-25699496 | MS.gene006750:CDS |
| CCGGAAGGGTATTTGGATAT+AGG | 0.401657 | 4.1:-25701777 | MS.gene006750:CDS |
| ATGTTAACTTTACATCAAAT+AGG | 0.410473 | 4.1:-25701060 | MS.gene006750:intron |
| TTTGGGATGTGGAGAGATCC+TGG | 0.416941 | 4.1:-25702559 | None:intergenic |
| CCAAAACTTCATCAACATAT+AGG | 0.420780 | 4.1:-25700200 | MS.gene006750:intron |
| AAGTTTCAACGCTGCCATAC+AGG | 0.425576 | 4.1:+25699206 | None:intergenic |
| CCTATATCCAAATACCCTTC+CGG | 0.439848 | 4.1:+25701777 | None:intergenic |
| CAGATATTGAATGACACAAA+TGG | 0.447976 | 4.1:-25699249 | MS.gene006750:CDS |
| GGAATCCATCCATCAATTAG+AGG | 0.453920 | 4.1:-25701529 | MS.gene006750:CDS |
| CCCTAATAATTCAGCAAAGA+AGG | 0.459539 | 4.1:-25701109 | MS.gene006750:CDS |
| TTCATACATCCAAAACATGT+TGG | 0.460780 | 4.1:+25699585 | None:intergenic |
| TCATCGAGCAGTATTATCAT+AGG | 0.464171 | 4.1:+25700591 | None:intergenic |
| ATATTCTTGCTGTTTATGCT+AGG | 0.472923 | 4.1:-25700817 | MS.gene006750:CDS |
| CAAGTCTAGATTTAGGATCA+AGG | 0.473791 | 4.1:-25702485 | MS.gene006750:intron |
| TCATACATCCAAAACATGTT+GGG | 0.474205 | 4.1:+25699586 | None:intergenic |
| AAAGAATCAGCAGGAACTCC+AGG | 0.484131 | 4.1:+25702541 | None:intergenic |
| AAACCTTGACGACATCATCT+AGG | 0.486549 | 4.1:+25699374 | None:intergenic |
| CTGTTTCCTCTTGTAGGAAG+TGG | 0.489158 | 4.1:-25701255 | MS.gene006750:CDS |
| AACATCGGTGCATTCCGGGC+GGG | 0.494642 | 4.1:+25702510 | None:intergenic |
| TGTTGGTGCACAGAGCATAT+TGG | 0.495820 | 4.1:-25700010 | MS.gene006750:intron |
| AAGAGATAAGGCAGCGCCGA+AGG | 0.498624 | 4.1:-25701447 | MS.gene006750:intron |
| TCAGGACGCAATATGCTGAA+TGG | 0.508754 | 4.1:-25701296 | MS.gene006750:intron |
| CTTGATCCTAAATCTAGACT+TGG | 0.511866 | 4.1:+25702486 | None:intergenic |
| GAAGTATTTAACAGATGATG+TGG | 0.512634 | 4.1:-25699624 | MS.gene006750:intron |
| AGAACCAATGGATCTTGAAT+CGG | 0.519372 | 4.1:+25701192 | None:intergenic |
| CTTCTCCTCTAATTGATGGA+TGG | 0.520804 | 4.1:+25701524 | None:intergenic |
| CGTGCTGCATTCTCTCCGGA+AGG | 0.525549 | 4.1:-25701792 | MS.gene006750:CDS |
| GTGGCGTGCTGCATTCTCTC+CGG | 0.528842 | 4.1:-25701796 | MS.gene006750:CDS |
| AGGAAAATAGATATGGGAAG+AGG | 0.531576 | 4.1:+25699451 | None:intergenic |
| TCTTTCCTCGAATGTACTCG+TGG | 0.533418 | 4.1:+25701471 | None:intergenic |
| TGATTCATTGTACCTTTGGG+AGG | 0.533545 | 4.1:-25699921 | MS.gene006750:intron |
| GCAACAAGGAAAATAGATAT+GGG | 0.536008 | 4.1:+25699445 | None:intergenic |
| ATAGATAATGATGTTGGCTA+TGG | 0.537992 | 4.1:-25700794 | MS.gene006750:CDS |
| CTTTCCTCGAATGTACTCGT+GGG | 0.538136 | 4.1:+25701472 | None:intergenic |
| ATTGTACCTCCTCAAGAAGT+AGG | 0.539196 | 4.1:-25701141 | MS.gene006750:CDS |
| CTTTCAACACACTAGCAACA+AGG | 0.544712 | 4.1:+25699431 | None:intergenic |
| CTCTAAGCCGAATCCACCGT+GGG | 0.546784 | 4.1:-25701749 | MS.gene006750:CDS |
| AAGGGTATTTGGATATAGGC+AGG | 0.550489 | 4.1:-25701773 | MS.gene006750:CDS |
| TCGAGGAAAGAGAAGAGATA+AGG | 0.553975 | 4.1:-25701459 | MS.gene006750:CDS |
| GTAAAACACTAAGTGAAAGA+AGG | 0.560988 | 4.1:-25701818 | MS.gene006750:CDS |
| GCTAGGATAGATAATGATGT+TGG | 0.562217 | 4.1:-25700800 | MS.gene006750:CDS |
| CTTGGAGCACCTACTTCTTG+AGG | 0.562938 | 4.1:+25701132 | None:intergenic |
| ACACCATCGTCGGTAACTAC+AGG | 0.563755 | 4.1:+25701216 | None:intergenic |
| TTCTTTCTATGAAACCCGCC+CGG | 0.566250 | 4.1:-25702524 | MS.gene006750:CDS |
| TGAACCCACGAGTACATTCG+AGG | 0.568758 | 4.1:-25701476 | MS.gene006750:CDS |
| AATGATGTTGGCTATGGTCA+AGG | 0.579514 | 4.1:-25700788 | MS.gene006750:intron |
| AGATGCACCAATAACAGTGT+GGG | 0.581528 | 4.1:-25700272 | MS.gene006750:CDS |
| AAAATAGATATGGGAAGAGG+AGG | 0.583193 | 4.1:+25699454 | None:intergenic |
| AATCTACCACTTCCTACAAG+AGG | 0.583193 | 4.1:+25701249 | None:intergenic |
| TGTACCGATTCAAGATCCAT+TGG | 0.585320 | 4.1:-25701196 | MS.gene006750:CDS |
| GTATTATCATAGGAGAGCAT+AGG | 0.593824 | 4.1:+25700601 | None:intergenic |
| GACGCAATATGCTGAATGGA+AGG | 0.594162 | 4.1:-25701292 | MS.gene006750:CDS |
| AGAATCTGAAGAAACTGCTG+AGG | 0.595745 | 4.1:-25699563 | MS.gene006750:CDS |
| TTCCTACAAGAGGAAACAGT+TGG | 0.598223 | 4.1:+25701259 | None:intergenic |
| AAGTATTTAACAGATGATGT+GGG | 0.607087 | 4.1:-25699623 | MS.gene006750:intron |
| GAACATCGGTGCATTCCGGG+CGG | 0.608173 | 4.1:+25702509 | None:intergenic |
| GTTTCATAGAAAGAATCAGC+AGG | 0.611829 | 4.1:+25702532 | None:intergenic |
| AAGGTACAATGAATCACAGA+AGG | 0.616443 | 4.1:+25699928 | None:intergenic |
| TTGATCCTAAATCTAGACTT+GGG | 0.619284 | 4.1:+25702487 | None:intergenic |
| GTGCTGCATTCTCTCCGGAA+GGG | 0.622634 | 4.1:-25701791 | MS.gene006750:CDS |
| AAATCTAGACTTGGGAACAT+CGG | 0.624918 | 4.1:+25702495 | None:intergenic |
| GATGCACCAATAACAGTGTG+GGG | 0.632868 | 4.1:-25700271 | MS.gene006750:CDS |
| GATTCGTACCGATAGGACAC+TGG | 0.634998 | 4.1:-25700879 | MS.gene006750:CDS |
| GAAGTTTGGGAATTTCTACT+CGG | 0.636274 | 4.1:-25701505 | MS.gene006750:CDS |
| TGGTGCACAGAGCATATTGG+TGG | 0.637467 | 4.1:-25700007 | MS.gene006750:intron |
| CAGATGCACCAATAACAGTG+TGG | 0.638420 | 4.1:-25700273 | MS.gene006750:CDS |
| AGGCCTAGATGATGTCGTCA+AGG | 0.647370 | 4.1:-25699377 | MS.gene006750:intron |
| AAGCTAAGCTAACCTCCCAA+AGG | 0.651555 | 4.1:+25699909 | None:intergenic |
| TGCACAGAGCATATTGGTGG+AGG | 0.655267 | 4.1:-25700004 | MS.gene006750:intron |
| GGAGCACCTACTTCTTGAGG+AGG | 0.659262 | 4.1:+25701135 | None:intergenic |
| AAACACTAAGTGAAAGAAGG+TGG | 0.670093 | 4.1:-25701815 | MS.gene006750:CDS |
| ACACTACTCCAGCAAGCACG+AGG | 0.678859 | 4.1:-25699397 | MS.gene006750:CDS |
| TTGAATCGGTACACCATCGT+CGG | 0.682044 | 4.1:+25701206 | None:intergenic |
| ACTCTAAGCCGAATCCACCG+TGG | 0.704771 | 4.1:-25701750 | MS.gene006750:CDS |
| TTGACGTGATTCGTACCGAT+AGG | 0.705672 | 4.1:-25700886 | MS.gene006750:CDS |
| AAAATGCAGTTACCCCACGG+TGG | 0.705798 | 4.1:+25701736 | None:intergenic |
| ATGCACCAATAACAGTGTGG+GGG | 0.708289 | 4.1:-25700270 | MS.gene006750:CDS |
| GCACCTGTAGTTACCGACGA+TGG | 0.722742 | 4.1:-25701219 | MS.gene006750:CDS |
| TCTAAGCCGAATCCACCGTG+GGG | 0.782631 | 4.1:-25701748 | MS.gene006750:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTATTTTTATTTTAAA+TGG | - | chr4.1:25699446-25699465 | MS.gene006750:CDS | 0.0% |
| !! | GATTTATTTCATTATTAGTA+TGG | - | chr4.1:25701216-25701235 | MS.gene006750:CDS | 15.0% |
| !! | TATATTGTAACTTCTAATAA+TGG | + | chr4.1:25699648-25699667 | None:intergenic | 15.0% |
| !! | AAGAGAATTTGTCAAAATTA+TGG | - | chr4.1:25700879-25700898 | MS.gene006750:CDS | 20.0% |
| !! | AATAAAGATCATAAGAAACA+AGG | + | chr4.1:25701403-25701422 | None:intergenic | 20.0% |
| !! | ACTATAAATTATTTCCAATG+AGG | + | chr4.1:25702055-25702074 | None:intergenic | 20.0% |
| !! | ACTTCATTTACATGTTAATT+AGG | - | chr4.1:25700065-25700084 | MS.gene006750:intron | 20.0% |
| !! | AGAGAATTTGTCAAAATTAT+GGG | - | chr4.1:25700880-25700899 | MS.gene006750:CDS | 20.0% |
| !! | ATATGTTTGCATGTATATAT+TGG | - | chr4.1:25699371-25699390 | MS.gene006750:intron | 20.0% |
| !! | ATGTAAGACAAATTATTAGT+AGG | + | chr4.1:25700151-25700170 | None:intergenic | 20.0% |
| !! | ATGTTAACTTTACATCAAAT+AGG | - | chr4.1:25700660-25700679 | MS.gene006750:intron | 20.0% |
| !! | TCATCATAAAATAATTCACA+TGG | - | chr4.1:25700766-25700785 | MS.gene006750:intron | 20.0% |
| !! | TTAATCTATGAATAAGTCAA+AGG | + | chr4.1:25700993-25701012 | None:intergenic | 20.0% |
| !! | TTAGAAAATAATCCAGAAAA+TGG | - | chr4.1:25700552-25700571 | MS.gene006750:CDS | 20.0% |
| !! | TTCTTATATAAACACATTTC+AGG | - | chr4.1:25700809-25700828 | MS.gene006750:CDS | 20.0% |
| !! | TTGAAACTAATGTAAATTTC+TGG | - | chr4.1:25701065-25701084 | MS.gene006750:CDS | 20.0% |
| !! | TTTATCTTGTGAATAAAAGT+TGG | - | chr4.1:25700101-25700120 | MS.gene006750:intron | 20.0% |
| !!! | ATTATTGAAATTTTCAAACC+AGG | - | chr4.1:25700169-25700188 | MS.gene006750:intron | 20.0% |
| !!! | CATATTGTTTTGACATTTAA+AGG | - | chr4.1:25701575-25701594 | MS.gene006750:intron | 20.0% |
| !!! | GTTATCTTTTTATAATTTGC+AGG | - | chr4.1:25701087-25701106 | MS.gene006750:CDS | 20.0% |
| !!! | TAACTTCTTTCTATATTTTC+AGG | - | chr4.1:25700406-25700425 | MS.gene006750:intron | 20.0% |
| !!! | TCTGAAAAGTATTAAATCAA+TGG | + | chr4.1:25702455-25702474 | None:intergenic | 20.0% |
| !!! | TTATTGAAATTTTCAAACCA+GGG | - | chr4.1:25700170-25700189 | MS.gene006750:intron | 20.0% |
| !!! | TTTACATTAGTTTCAAATTC+TGG | + | chr4.1:25701061-25701080 | None:intergenic | 20.0% |
| ! | AAAATGCAAAACTCTTAACA+TGG | + | chr4.1:25699273-25699292 | None:intergenic | 25.0% |
| ! | AAAGGAAAAAAGATTACCTT+CGG | + | chr4.1:25700292-25700311 | None:intergenic | 25.0% |
| ! | AACATTGAAGAACAAATTCA+AGG | + | chr4.1:25701551-25701570 | None:intergenic | 25.0% |
| ! | AAGGCATGTAACATAATATA+TGG | + | chr4.1:25701615-25701634 | None:intergenic | 25.0% |
| ! | AAGTATTTAACAGATGATGT+GGG | - | chr4.1:25702097-25702116 | MS.gene006750:intron | 25.0% |
| ! | ACAACTTATAAACACGTTAT+CGG | + | chr4.1:25699308-25699327 | None:intergenic | 25.0% |
| ! | AGTAGAATGTGATAGTAATT+AGG | + | chr4.1:25700322-25700341 | None:intergenic | 25.0% |
| ! | CAATGTATATGTAAGAATGA+TGG | - | chr4.1:25699423-25699442 | MS.gene006750:CDS | 25.0% |
| ! | CAGACAAAAAAGTAATTCAA+TGG | - | chr4.1:25700637-25700656 | MS.gene006750:intron | 25.0% |
| ! | GTATTGGAATACAATAATGA+GGG | - | chr4.1:25701341-25701360 | MS.gene006750:intron | 25.0% |
| ! | TAAAATTAGTGTGTGTGATA+TGG | + | chr4.1:25699751-25699770 | None:intergenic | 25.0% |
| ! | TAAATGGAAACCTTATAGAA+GGG | - | chr4.1:25699462-25699481 | MS.gene006750:CDS | 25.0% |
| ! | TACAAAGACCTTAAATCTAA+AGG | + | chr4.1:25699826-25699845 | None:intergenic | 25.0% |
| ! | TAGCTTTCTTTGTTCATATA+TGG | - | chr4.1:25702418-25702437 | MS.gene006750:intron | 25.0% |
| ! | TAGTAATTAGGAGTTATGAA+AGG | + | chr4.1:25700310-25700329 | None:intergenic | 25.0% |
| ! | TATATTGTGCCAAATATCTT+TGG | - | chr4.1:25699540-25699559 | MS.gene006750:CDS | 25.0% |
| ! | TGAAACAATAACAAAACATG+AGG | + | chr4.1:25701288-25701307 | None:intergenic | 25.0% |
| ! | TGTAAAACACAACAATCTTA+AGG | + | chr4.1:25700350-25700369 | None:intergenic | 25.0% |
| ! | TGTATTGGAATACAATAATG+AGG | - | chr4.1:25701340-25701359 | MS.gene006750:intron | 25.0% |
| ! | TTAAAGTCAATACGTCATTA+TGG | - | chr4.1:25702194-25702213 | MS.gene006750:intron | 25.0% |
| ! | TTAAATGGAAACCTTATAGA+AGG | - | chr4.1:25699461-25699480 | MS.gene006750:CDS | 25.0% |
| ! | TTGAGATTCCTTTAGATTTA+AGG | - | chr4.1:25699815-25699834 | MS.gene006750:intron | 25.0% |
| ! | TTGCATAAATTAGAAACAGT+TGG | - | chr4.1:25701989-25702008 | MS.gene006750:intron | 25.0% |
| ! | TTTGCTACAGAATACAAAAA+AGG | + | chr4.1:25701634-25701653 | None:intergenic | 25.0% |
| !! | ACTAGAAAATTCTTCAAGTT+GGG | + | chr4.1:25701321-25701340 | None:intergenic | 25.0% |
| !! | CACTATAATAGGTATACTTT+TGG | - | chr4.1:25700711-25700730 | MS.gene006750:intron | 25.0% |
| !! | TATGAACTGTCTTTTAATGT+TGG | - | chr4.1:25701693-25701712 | MS.gene006750:intron | 25.0% |
| !! | TATTAGTATGGTCTTAATCA+TGG | - | chr4.1:25701228-25701247 | MS.gene006750:CDS | 25.0% |
| !! | TTATTTTCTAACAGAACCAA+TGG | + | chr4.1:25700543-25700562 | None:intergenic | 25.0% |
| !!! | AACAAAGTTGAACTTTTTTG+TGG | + | chr4.1:25702377-25702396 | None:intergenic | 25.0% |
| !!! | TGAAGAATTTTCTAGTGTAT+TGG | - | chr4.1:25701325-25701344 | MS.gene006750:intron | 25.0% |
| !!! | TTATTGTGATTTTTAAAGCG+AGG | - | chr4.1:25701418-25701437 | MS.gene006750:intron | 25.0% |
| !!! | TTCTAATAATGGATTCTTGT+AGG | + | chr4.1:25699637-25699656 | None:intergenic | 25.0% |
| ACCTTCTTTGCTGAATTATT+AGG | + | chr4.1:25700615-25700634 | None:intergenic | 30.0% | |
| AGAGACTCAACTAAACAATT+TGG | - | chr4.1:25701474-25701493 | MS.gene006750:CDS | 30.0% | |
| AGCAACAAGGAAAATAGATA+TGG | + | chr4.1:25702279-25702298 | None:intergenic | 30.0% | |
| AGTTCTATCACAAACTTGTA+TGG | + | chr4.1:25699680-25699699 | None:intergenic | 30.0% | |
| AGTTCTCAATGCACTATAAT+AGG | - | chr4.1:25700700-25700719 | MS.gene006750:intron | 30.0% | |
| ATAAAAAACCAGTGTCCTAT+CGG | + | chr4.1:25700852-25700871 | None:intergenic | 30.0% | |
| ATCAATTAGAGGAGAAGTTT+GGG | - | chr4.1:25700202-25700221 | MS.gene006750:CDS | 30.0% | |
| CACTAGAAAATTCTTCAAGT+TGG | + | chr4.1:25701322-25701341 | None:intergenic | 30.0% | |
| CAGATATTGAATGACACAAA+TGG | - | chr4.1:25702471-25702490 | MS.gene006750:intron | 30.0% | |
| CCAAAACTTCATCAACATAT+AGG | - | chr4.1:25701520-25701539 | MS.gene006750:CDS | 30.0% | |
| CCTTCTTTGCTGAATTATTA+GGG | + | chr4.1:25700614-25700633 | None:intergenic | 30.0% | |
| GATAACGTGTTTATAAGTTG+TGG | - | chr4.1:25699307-25699326 | MS.gene006750:intron | 30.0% | |
| GCAACAAGGAAAATAGATAT+GGG | + | chr4.1:25702278-25702297 | None:intergenic | 30.0% | |
| GCATGTAACATAATATATGG+AGG | + | chr4.1:25701612-25701631 | None:intergenic | 30.0% | |
| GTAAAACACTAAGTGAAAGA+AGG | - | chr4.1:25699902-25699921 | MS.gene006750:intron | 30.0% | |
| TCATACATCCAAAACATGTT+GGG | + | chr4.1:25702137-25702156 | None:intergenic | 30.0% | |
| TGATCAAATGTGAAACTCAA+TGG | + | chr4.1:25699598-25699617 | None:intergenic | 30.0% | |
| TGCCATGGCATAATAAAAAT+TGG | + | chr4.1:25701928-25701947 | None:intergenic | 30.0% | |
| TTCATACATCCAAAACATGT+TGG | + | chr4.1:25702138-25702157 | None:intergenic | 30.0% | |
| TTGATCCTAAATCTAGACTT+GGG | + | chr4.1:25699236-25699255 | None:intergenic | 30.0% | |
| ! | AATATGATCCCAACATGTTT+TGG | - | chr4.1:25702126-25702145 | MS.gene006750:intron | 30.0% |
| ! | ATAGATAATGATGTTGGCTA+TGG | - | chr4.1:25700926-25700945 | MS.gene006750:intron | 30.0% |
| ! | GAAGTATTTAACAGATGATG+TGG | - | chr4.1:25702096-25702115 | MS.gene006750:intron | 30.0% |
| ! | GTATATCAAGTTTTCCTCAT+TGG | - | chr4.1:25702038-25702057 | MS.gene006750:intron | 30.0% |
| ! | GTCCAATTTTTATTATGCCA+TGG | - | chr4.1:25701923-25701942 | MS.gene006750:intron | 30.0% |
| ! | GTTCATATATGGATTGACTT+TGG | - | chr4.1:25702429-25702448 | MS.gene006750:intron | 30.0% |
| !! | AATGGTTCTAATCATGATGA+TGG | - | chr4.1:25699490-25699509 | MS.gene006750:CDS | 30.0% |
| !! | ATATTCTTGCTGTTTATGCT+AGG | - | chr4.1:25700903-25700922 | MS.gene006750:intron | 30.0% |
| !! | CCTATATGTTGATGAAGTTT+TGG | + | chr4.1:25701523-25701542 | None:intergenic | 30.0% |
| AAAATAGATATGGGAAGAGG+AGG | + | chr4.1:25702269-25702288 | None:intergenic | 35.0% | |
| AAACACTAAGTGAAAGAAGG+TGG | - | chr4.1:25699905-25699924 | MS.gene006750:intron | 35.0% | |
| AAATCTAGACTTGGGAACAT+CGG | + | chr4.1:25699228-25699247 | None:intergenic | 35.0% | |
| AAGGTACAATGAATCACAGA+AGG | + | chr4.1:25701795-25701814 | None:intergenic | 35.0% | |
| ACGTGTTTATAAGTTGTGGA+CGG | - | chr4.1:25699311-25699330 | MS.gene006750:intron | 35.0% | |
| AGAACCAATGGATCTTGAAT+CGG | + | chr4.1:25700531-25700550 | None:intergenic | 35.0% | |
| AGGAAAATAGATATGGGAAG+AGG | + | chr4.1:25702272-25702291 | None:intergenic | 35.0% | |
| ATGTTCCCAAGTCTAGATTT+AGG | - | chr4.1:25699228-25699247 | MS.gene006750:CDS | 35.0% | |
| CAAACTTCTCCTCTAATTGA+TGG | + | chr4.1:25700203-25700222 | None:intergenic | 35.0% | |
| CATCAATTAGAGGAGAAGTT+TGG | - | chr4.1:25700201-25700220 | MS.gene006750:CDS | 35.0% | |
| CCCTAATAATTCAGCAAAGA+AGG | - | chr4.1:25700611-25700630 | MS.gene006750:CDS | 35.0% | |
| CGTTACAAGCCAAAGATATT+TGG | + | chr4.1:25699552-25699571 | None:intergenic | 35.0% | |
| CTGTGATTCATTGTACCTTT+GGG | - | chr4.1:25701796-25701815 | MS.gene006750:CDS | 35.0% | |
| CTTGATCCTAAATCTAGACT+TGG | + | chr4.1:25699237-25699256 | None:intergenic | 35.0% | |
| GAAGTTTGGGAATTTCTACT+CGG | - | chr4.1:25700215-25700234 | MS.gene006750:CDS | 35.0% | |
| GAGAGAGAGAATATGAGAAA+TGG | - | chr4.1:25702224-25702243 | MS.gene006750:intron | 35.0% | |
| GAGGAAAACTTGATATACGA+AGG | + | chr4.1:25702036-25702055 | None:intergenic | 35.0% | |
| GCTAGGATAGATAATGATGT+TGG | - | chr4.1:25700920-25700939 | MS.gene006750:intron | 35.0% | |
| GTTTCATAGAAAGAATCAGC+AGG | + | chr4.1:25699191-25699210 | None:intergenic | 35.0% | |
| TCATCGAGCAGTATTATCAT+AGG | + | chr4.1:25701132-25701151 | None:intergenic | 35.0% | |
| TCTGTGATTCATTGTACCTT+TGG | - | chr4.1:25701795-25701814 | MS.gene006750:CDS | 35.0% | |
| TTTGCTGAATTATTAGGGCT+TGG | + | chr4.1:25700609-25700628 | None:intergenic | 35.0% | |
| ! | CAAGTCTAGATTTAGGATCA+AGG | - | chr4.1:25699235-25699254 | MS.gene006750:CDS | 35.0% |
| ! | GTATTATCATAGGAGAGCAT+AGG | + | chr4.1:25701122-25701141 | None:intergenic | 35.0% |
| !!! | ACTAGTTTTTGTTGTTCTGC+AGG | - | chr4.1:25699876-25699895 | MS.gene006750:intron | 35.0% |
| AAACCTTGACGACATCATCT+AGG | + | chr4.1:25702349-25702368 | None:intergenic | 40.0% | |
| AATCTACCACTTCCTACAAG+AGG | + | chr4.1:25700474-25700493 | None:intergenic | 40.0% | |
| AGAATCTGAAGAAACTGCTG+AGG | - | chr4.1:25702157-25702176 | MS.gene006750:intron | 40.0% | |
| AGATGCACCAATAACAGTGT+GGG | - | chr4.1:25701448-25701467 | MS.gene006750:CDS | 40.0% | |
| AGATGCCAAAAAAGCCTGTA+TGG | - | chr4.1:25702500-25702519 | MS.gene006750:CDS | 40.0% | |
| ATGATGAAGCTGATGCTTTC+TGG | - | chr4.1:25701148-25701167 | MS.gene006750:CDS | 40.0% | |
| ATGCATACGATTGCTGCATT+AGG | + | chr4.1:25699782-25699801 | None:intergenic | 40.0% | |
| ATTGTACCTCCTCAAGAAGT+AGG | - | chr4.1:25700579-25700598 | MS.gene006750:CDS | 40.0% | |
| CCATTGTTCACCCTTCTATA+AGG | + | chr4.1:25699475-25699494 | None:intergenic | 40.0% | |
| CCTATATCCAAATACCCTTC+CGG | + | chr4.1:25699946-25699965 | None:intergenic | 40.0% | |
| CCTTATAGAAGGGTGAACAA+TGG | - | chr4.1:25699472-25699491 | MS.gene006750:CDS | 40.0% | |
| CTTCTCCTCTAATTGATGGA+TGG | + | chr4.1:25700199-25700218 | None:intergenic | 40.0% | |
| CTTTCAACACACTAGCAACA+AGG | + | chr4.1:25702292-25702311 | None:intergenic | 40.0% | |
| GACTCAATGTTCATCTGCAT+GGG | + | chr4.1:25701867-25701886 | None:intergenic | 40.0% | |
| GATTCTTGTAGGCACAAATG+GGG | + | chr4.1:25699626-25699645 | None:intergenic | 40.0% | |
| GCAATGAAGAAAATGTGCCA+TGG | + | chr4.1:25701943-25701962 | None:intergenic | 40.0% | |
| GGAATCCATCCATCAATTAG+AGG | - | chr4.1:25700191-25700210 | MS.gene006750:intron | 40.0% | |
| GGACAATGTATGCATACTGA+GGG | + | chr4.1:25701907-25701926 | None:intergenic | 40.0% | |
| GGATTCTTGTAGGCACAAAT+GGG | + | chr4.1:25699627-25699646 | None:intergenic | 40.0% | |
| TCGAGGAAAGAGAAGAGATA+AGG | - | chr4.1:25700261-25700280 | MS.gene006750:CDS | 40.0% | |
| TGACTCAATGTTCATCTGCA+TGG | + | chr4.1:25701868-25701887 | None:intergenic | 40.0% | |
| TGATTCATTGTACCTTTGGG+AGG | - | chr4.1:25701799-25701818 | MS.gene006750:CDS | 40.0% | |
| TGCATACGATTGCTGCATTA+GGG | + | chr4.1:25699781-25699800 | None:intergenic | 40.0% | |
| TGGACAATGTATGCATACTG+AGG | + | chr4.1:25701908-25701927 | None:intergenic | 40.0% | |
| TGGATTCTTGTAGGCACAAA+TGG | + | chr4.1:25699628-25699647 | None:intergenic | 40.0% | |
| TTCCTACAAGAGGAAACAGT+TGG | + | chr4.1:25700464-25700483 | None:intergenic | 40.0% | |
| TTGAAAATGCAGTTACCCCA+CGG | + | chr4.1:25699990-25700009 | None:intergenic | 40.0% | |
| ! | AATGATGTTGGCTATGGTCA+AGG | - | chr4.1:25700932-25700951 | MS.gene006750:intron | 40.0% |
| ! | GGTACAATCACTCCATTTTC+TGG | + | chr4.1:25700567-25700586 | None:intergenic | 40.0% |
| ! | TAATTGATGGATGGATTCCC+TGG | + | chr4.1:25700190-25700209 | None:intergenic | 40.0% |
| !! | AAGGGTATTTGGATATAGGC+AGG | - | chr4.1:25699947-25699966 | MS.gene006750:CDS | 40.0% |
| !! | GTGACTATCTGTTCGCTTTT+CGG | - | chr4.1:25701738-25701757 | MS.gene006750:intron | 40.0% |
| !! | GTTCGCTTTTCGGATGTTAA+TGG | - | chr4.1:25701748-25701767 | MS.gene006750:intron | 40.0% |
| !! | TGTACCGATTCAAGATCCAT+TGG | - | chr4.1:25700524-25700543 | MS.gene006750:intron | 40.0% |
| AAAGAATCAGCAGGAACTCC+AGG | + | chr4.1:25699182-25699201 | None:intergenic | 45.0% | |
| AAGCTAAGCTAACCTCCCAA+AGG | + | chr4.1:25701814-25701833 | None:intergenic | 45.0% | |
| AAGTTTCAACGCTGCCATAC+AGG | + | chr4.1:25702517-25702536 | None:intergenic | 45.0% | |
| ATGCACCAATAACAGTGTGG+GGG | - | chr4.1:25701450-25701469 | MS.gene006750:CDS | 45.0% | |
| CAGATGCACCAATAACAGTG+TGG | - | chr4.1:25701447-25701466 | MS.gene006750:intron | 45.0% | |
| CTGTTTCCTCTTGTAGGAAG+TGG | - | chr4.1:25700465-25700484 | MS.gene006750:intron | 45.0% | |
| CTTTCCTCGAATGTACTCGT+GGG | + | chr4.1:25700251-25700270 | None:intergenic | 45.0% | |
| GACGCAATATGCTGAATGGA+AGG | - | chr4.1:25700428-25700447 | MS.gene006750:intron | 45.0% | |
| GATGCACCAATAACAGTGTG+GGG | - | chr4.1:25701449-25701468 | MS.gene006750:CDS | 45.0% | |
| TCAGGACGCAATATGCTGAA+TGG | - | chr4.1:25700424-25700443 | MS.gene006750:intron | 45.0% | |
| TCTTTCCTCGAATGTACTCG+TGG | + | chr4.1:25700252-25700271 | None:intergenic | 45.0% | |
| TGTTGGTGCACAGAGCATAT+TGG | - | chr4.1:25701710-25701729 | MS.gene006750:intron | 45.0% | |
| TTCTTTCTATGAAACCCGCC+CGG | - | chr4.1:25699196-25699215 | MS.gene006750:CDS | 45.0% | |
| TTGAATCGGTACACCATCGT+CGG | + | chr4.1:25700517-25700536 | None:intergenic | 45.0% | |
| ! | TTGACGTGATTCGTACCGAT+AGG | - | chr4.1:25700834-25700853 | MS.gene006750:CDS | 45.0% |
| !! | ATTCTCTCCGGAAGGGTATT+TGG | - | chr4.1:25699936-25699955 | MS.gene006750:CDS | 45.0% |
| !! | CCGGAAGGGTATTTGGATAT+AGG | - | chr4.1:25699943-25699962 | MS.gene006750:CDS | 45.0% |
| !!! | GTTTTTGTTGTTCTGCAGGC+TGG | - | chr4.1:25699880-25699899 | MS.gene006750:intron | 45.0% |
| AAAATGCAGTTACCCCACGG+TGG | + | chr4.1:25699987-25700006 | None:intergenic | 50.0% | |
| ACACCATCGTCGGTAACTAC+AGG | + | chr4.1:25700507-25700526 | None:intergenic | 50.0% | |
| AGGCCTAGATGATGTCGTCA+AGG | - | chr4.1:25702343-25702362 | MS.gene006750:intron | 50.0% | |
| CGCCAACTGTTTCCTCTTGT+AGG | - | chr4.1:25700459-25700478 | MS.gene006750:intron | 50.0% | |
| CTCTACCCCCACACTGTTAT+TGG | + | chr4.1:25701458-25701477 | None:intergenic | 50.0% | |
| TGAACCCACGAGTACATTCG+AGG | - | chr4.1:25700244-25700263 | MS.gene006750:CDS | 50.0% | |
| TGCACAGAGCATATTGGTGG+AGG | - | chr4.1:25701716-25701735 | MS.gene006750:intron | 50.0% | |
| TGGTGCACAGAGCATATTGG+TGG | - | chr4.1:25701713-25701732 | MS.gene006750:intron | 50.0% | |
| TTGGGAACATCGGTGCATTC+CGG | + | chr4.1:25699218-25699237 | None:intergenic | 50.0% | |
| ! | CTTGGAGCACCTACTTCTTG+AGG | + | chr4.1:25700591-25700610 | None:intergenic | 50.0% |
| ! | GATTCGTACCGATAGGACAC+TGG | - | chr4.1:25700841-25700860 | MS.gene006750:CDS | 50.0% |
| !!! | CGCTGCCATACAGGCTTTTT+TGG | + | chr4.1:25702508-25702527 | None:intergenic | 50.0% |
| ACACTACTCCAGCAAGCACG+AGG | - | chr4.1:25702323-25702342 | MS.gene006750:intron | 55.0% | |
| ACTCTAAGCCGAATCCACCG+TGG | - | chr4.1:25699970-25699989 | MS.gene006750:CDS | 55.0% | |
| CTCTAAGCCGAATCCACCGT+GGG | - | chr4.1:25699971-25699990 | MS.gene006750:CDS | 55.0% | |
| GCACCTGTAGTTACCGACGA+TGG | - | chr4.1:25700501-25700520 | MS.gene006750:intron | 55.0% | |
| GTGCTGCATTCTCTCCGGAA+GGG | - | chr4.1:25699929-25699948 | MS.gene006750:CDS | 55.0% | |
| TCTAAGCCGAATCCACCGTG+GGG | - | chr4.1:25699972-25699991 | MS.gene006750:CDS | 55.0% | |
| TGGGAACATCGGTGCATTCC+GGG | + | chr4.1:25699217-25699236 | None:intergenic | 55.0% | |
| ! | AAGAGATAAGGCAGCGCCGA+AGG | - | chr4.1:25700273-25700292 | MS.gene006750:CDS | 55.0% |
| ! | CAGTTACCCCACGGTGGATT+CGG | + | chr4.1:25699981-25700000 | None:intergenic | 55.0% |
| ! | GGAGCACCTACTTCTTGAGG+AGG | + | chr4.1:25700588-25700607 | None:intergenic | 55.0% |
| AACATCGGTGCATTCCGGGC+GGG | + | chr4.1:25699213-25699232 | None:intergenic | 60.0% | |
| CATCTAGGCCTCGTGCTTGC+TGG | + | chr4.1:25702334-25702353 | None:intergenic | 60.0% | |
| CGTGCTGCATTCTCTCCGGA+AGG | - | chr4.1:25699928-25699947 | MS.gene006750:CDS | 60.0% | |
| GAACATCGGTGCATTCCGGG+CGG | + | chr4.1:25699214-25699233 | None:intergenic | 60.0% | |
| GTGGCGTGCTGCATTCTCTC+CGG | - | chr4.1:25699924-25699943 | MS.gene006750:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 25699167 | 25702575 | 25699167 | ID=MS.gene006750 |
| chr4.1 | mRNA | 25699167 | 25702575 | 25699167 | ID=MS.gene006750.t1;Parent=MS.gene006750 |
| chr4.1 | exon | 25702486 | 25702575 | 25702486 | ID=MS.gene006750.t1.exon1;Parent=MS.gene006750.t1 |
| chr4.1 | CDS | 25702486 | 25702575 | 25702486 | ID=cds.MS.gene006750.t1;Parent=MS.gene006750.t1 |
| chr4.1 | exon | 25701749 | 25701844 | 25701749 | ID=MS.gene006750.t1.exon2;Parent=MS.gene006750.t1 |
| chr4.1 | CDS | 25701749 | 25701844 | 25701749 | ID=cds.MS.gene006750.t1;Parent=MS.gene006750.t1 |
| chr4.1 | exon | 25701448 | 25701551 | 25701448 | ID=MS.gene006750.t1.exon3;Parent=MS.gene006750.t1 |
| chr4.1 | CDS | 25701448 | 25701551 | 25701448 | ID=cds.MS.gene006750.t1;Parent=MS.gene006750.t1 |
| chr4.1 | exon | 25701061 | 25701314 | 25701061 | ID=MS.gene006750.t1.exon4;Parent=MS.gene006750.t1 |
| chr4.1 | CDS | 25701061 | 25701314 | 25701061 | ID=cds.MS.gene006750.t1;Parent=MS.gene006750.t1 |
| chr4.1 | exon | 25700789 | 25700911 | 25700789 | ID=MS.gene006750.t1.exon5;Parent=MS.gene006750.t1 |
| chr4.1 | CDS | 25700789 | 25700911 | 25700789 | ID=cds.MS.gene006750.t1;Parent=MS.gene006750.t1 |
| chr4.1 | exon | 25700545 | 25700633 | 25700545 | ID=MS.gene006750.t1.exon6;Parent=MS.gene006750.t1 |
| chr4.1 | CDS | 25700545 | 25700633 | 25700545 | ID=cds.MS.gene006750.t1;Parent=MS.gene006750.t1 |
| chr4.1 | exon | 25700201 | 25700306 | 25700201 | ID=MS.gene006750.t1.exon7;Parent=MS.gene006750.t1 |
| chr4.1 | CDS | 25700201 | 25700306 | 25700201 | ID=cds.MS.gene006750.t1;Parent=MS.gene006750.t1 |
| chr4.1 | exon | 25699922 | 25700019 | 25699922 | ID=MS.gene006750.t1.exon8;Parent=MS.gene006750.t1 |
| chr4.1 | CDS | 25699922 | 25700019 | 25699922 | ID=cds.MS.gene006750.t1;Parent=MS.gene006750.t1 |
| chr4.1 | exon | 25699378 | 25699632 | 25699378 | ID=MS.gene006750.t1.exon9;Parent=MS.gene006750.t1 |
| chr4.1 | CDS | 25699378 | 25699632 | 25699378 | ID=cds.MS.gene006750.t1;Parent=MS.gene006750.t1 |
| chr4.1 | exon | 25699167 | 25699268 | 25699167 | ID=MS.gene006750.t1.exon10;Parent=MS.gene006750.t1 |
| chr4.1 | CDS | 25699167 | 25699268 | 25699167 | ID=cds.MS.gene006750.t1;Parent=MS.gene006750.t1 |
| Gene Sequence |
| Protein sequence |
