AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069825


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069825.t1 MTR_2g083220 98.194 443 8 0 1 443 1 443 0.0 905
MS.gene069825.t1 MTR_4g081110 76.244 442 97 4 1 441 1 435 0.0 692
MS.gene069825.t1 MTR_1g069705 53.515 441 175 3 1 441 12 422 4.04e-180 509
MS.gene069825.t1 MTR_2g099185 52.147 163 77 1 170 332 355 516 6.32e-51 182
MS.gene069825.t1 MTR_2g099185 38.889 90 54 1 30 118 37 126 1.80e-11 66.6
MS.gene069825.t1 MTR_2g099185 50.000 166 82 1 170 335 360 524 1.91e-47 171
MS.gene069825.t1 MTR_2g099185 38.947 95 57 1 25 118 37 131 2.34e-12 69.3
MS.gene069825.t1 MTR_2g099185 50.000 166 82 1 170 335 355 519 2.93e-47 170
MS.gene069825.t1 MTR_2g099185 38.889 90 54 1 30 118 37 126 2.27e-11 66.2
MS.gene069825.t1 MTR_4g115090 41.096 146 82 2 185 328 431 574 1.31e-30 125
MS.gene069825.t1 MTR_3g092100 32.751 229 124 3 204 432 338 536 1.07e-29 121
MS.gene069825.t1 MTR_3g092100 37.748 151 73 6 24 171 61 193 6.77e-16 80.1
MS.gene069825.t1 MTR_1g007590 30.837 227 127 5 206 432 290 486 2.93e-28 117
MS.gene069825.t1 MTR_1g007590 30.837 227 127 5 206 432 385 581 6.82e-28 116
MS.gene069825.t1 MTR_1g007590 49.367 79 38 1 36 112 68 146 6.91e-17 83.6
MS.gene069825.t1 MTR_1g072400 54.386 57 26 0 200 256 47 103 4.91e-21 88.2
MS.gene069825.t1 MTR_5g065510 50.000 72 35 1 31 101 21 92 2.71e-15 72.0
MS.gene069825.t1 MTR_8g085300 26.190 294 177 11 55 326 107 382 5.88e-15 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069825.t1 AT4G27100 72.851 442 111 3 1 442 1 433 0.0 648
MS.gene069825.t1 AT4G27100 72.500 440 112 3 1 440 1 431 0.0 642
MS.gene069825.t1 AT5G54780 70.998 431 113 3 1 430 1 420 0.0 614
MS.gene069825.t1 AT2G20440 53.864 440 177 4 1 440 7 420 0.0 512
MS.gene069825.t1 AT2G20440 53.864 440 177 4 1 440 7 420 0.0 512
MS.gene069825.t1 AT4G28550 53.409 440 179 4 1 440 7 420 3.16e-178 505
MS.gene069825.t1 AT2G20440 56.135 326 122 2 1 326 7 311 1.15e-139 404
MS.gene069825.t1 AT4G28550 56.173 324 121 2 1 324 7 309 5.78e-139 402
MS.gene069825.t1 AT4G28550 56.000 325 122 2 1 325 7 310 2.03e-138 400
MS.gene069825.t1 AT2G20440 50.909 330 136 4 111 440 1 304 5.58e-122 357
MS.gene069825.t1 AT3G59570 37.386 329 155 4 158 439 339 663 1.44e-58 204
MS.gene069825.t1 AT3G59570 42.391 92 52 1 30 120 44 135 5.66e-15 77.8
MS.gene069825.t1 AT2G43490 53.801 171 78 1 162 332 339 508 4.93e-55 195
MS.gene069825.t1 AT2G43490 37.410 139 77 5 30 166 44 174 3.33e-16 81.6
MS.gene069825.t1 AT2G43490 53.801 171 78 1 162 332 339 508 4.93e-55 195
MS.gene069825.t1 AT2G43490 37.410 139 77 5 30 166 44 174 3.33e-16 81.6
MS.gene069825.t1 AT2G43490 53.801 171 78 1 162 332 339 508 4.93e-55 195
MS.gene069825.t1 AT2G43490 37.410 139 77 5 30 166 44 174 3.33e-16 81.6
MS.gene069825.t1 AT2G43490 53.801 171 78 1 162 332 339 508 4.93e-55 195
MS.gene069825.t1 AT2G43490 37.410 139 77 5 30 166 44 174 3.33e-16 81.6
MS.gene069825.t1 AT2G43490 53.801 171 78 1 162 332 339 508 5.12e-55 195
MS.gene069825.t1 AT2G43490 37.410 139 77 5 30 166 44 174 3.24e-16 81.6
MS.gene069825.t1 AT2G43490 53.801 171 78 1 162 332 335 504 5.33e-55 195
MS.gene069825.t1 AT2G43490 36.806 144 81 5 25 166 35 170 3.67e-17 84.7
MS.gene069825.t1 AT2G43490 53.801 171 78 1 162 332 335 504 5.33e-55 195
MS.gene069825.t1 AT2G43490 36.806 144 81 5 25 166 35 170 3.67e-17 84.7
MS.gene069825.t1 AT2G43490 53.801 171 78 1 162 332 339 508 5.78e-55 194
MS.gene069825.t1 AT2G43490 37.410 139 77 5 30 166 44 174 1.82e-16 82.4
MS.gene069825.t1 AT3G59570 51.429 175 84 1 158 332 339 512 8.64e-52 185
MS.gene069825.t1 AT3G59570 43.333 90 50 1 30 118 44 133 6.09e-15 77.8
MS.gene069825.t1 AT3G59570 51.429 175 84 1 158 332 339 512 1.18e-51 186
MS.gene069825.t1 AT3G59570 42.391 92 52 1 30 120 44 135 6.31e-15 77.8
MS.gene069825.t1 AT5G52580 28.346 254 123 4 185 429 456 659 3.01e-29 121
MS.gene069825.t1 AT5G41940 34.615 234 119 8 206 435 345 548 3.12e-29 120
MS.gene069825.t1 AT5G41940 34.286 140 87 2 34 168 87 226 1.45e-16 82.4
MS.gene069825.t1 AT5G52580 28.346 254 123 4 185 429 439 642 3.32e-29 120
MS.gene069825.t1 AT5G52580 28.346 254 123 4 185 429 445 648 4.03e-29 120
MS.gene069825.t1 AT5G53570 44.715 123 66 1 206 328 338 458 1.75e-28 118
MS.gene069825.t1 AT5G53570 41.237 97 52 3 24 118 86 179 2.74e-12 68.9
MS.gene069825.t1 AT5G53570 44.715 123 66 1 206 328 365 485 2.43e-28 118
MS.gene069825.t1 AT5G53570 41.237 97 52 3 24 118 113 206 3.08e-12 68.9
MS.gene069825.t1 AT5G24390 41.463 123 70 1 206 328 317 437 4.43e-27 114
MS.gene069825.t1 AT3G49350 28.205 234 134 4 206 435 330 533 2.80e-26 111
MS.gene069825.t1 AT1G04830 26.573 286 171 11 67 333 125 390 3.47e-16 80.9
MS.gene069825.t1 AT1G04830 26.573 286 171 11 67 333 125 390 3.72e-16 80.9

Find 95 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTGTCTGGATTTCTTTC+AGG 0.106976 2.1:-17870213 None:intergenic
AAGAAAACTTGTCAAAATTA+TGG 0.190885 2.1:+17870509 MS.gene069825:CDS
ATAAAATACCTATATGTTTA+TGG 0.198183 2.1:-17871220 None:intergenic
TGTTTGGTGCTAGGCTTTCT+TGG 0.220830 2.1:-17873303 None:intergenic
CCTATATGTTTATGGAGTTT+TGG 0.239607 2.1:-17871212 None:intergenic
CGCCAATTGTTTCCTCTTGT+TGG 0.248172 2.1:+17870120 MS.gene069825:CDS
AGGGAGTCCATCCATCAATT+AGG 0.263963 2.1:+17869728 MS.gene069825:intron
GGAGGCTCAACTAAGTAATT+TGG 0.270154 2.1:+17871166 MS.gene069825:CDS
CATCAATTAGGGGAGAAGTT+TGG 0.292286 2.1:+17869740 MS.gene069825:CDS
ATCAATTAGGGGAGAAGTTT+GGG 0.302400 2.1:+17869741 MS.gene069825:CDS
AAACACTAAGTCCAAGAAAA+TGG 0.315609 2.1:+17869415 MS.gene069825:CDS
CAAACTTCTCCCCTAATTGA+TGG 0.323763 2.1:-17869739 None:intergenic
CATCCAAGCCTCGCGCTTCA+TGG 0.324462 2.1:-17872455 None:intergenic
GGGAGTCCATCCATCAATTA+GGG 0.330099 2.1:+17869729 MS.gene069825:intron
ATGATGAAGCAGACGCATTT+TGG 0.333770 2.1:+17870945 MS.gene069825:CDS
GATGTACTGGTCGCACTCTT+GGG 0.336065 2.1:+17871141 MS.gene069825:CDS
AGATGTACTGGTCGCACTCT+TGG 0.345747 2.1:+17871140 MS.gene069825:CDS
AGGAAATCTAGATGCCAAAA+AGG 0.346102 2.1:+17872791 MS.gene069825:CDS
AAATTCACAAACCTATTTGA+TGG 0.347183 2.1:-17870341 None:intergenic
ATGTTAACTCTCCATCAAAT+AGG 0.350184 2.1:+17870330 MS.gene069825:CDS
TCATACATCAAGAACAAATA+AGG 0.353993 2.1:-17872252 None:intergenic
CTTTCGTCAAATGTACTCTT+CGG 0.363004 2.1:-17869787 None:intergenic
AGAAAACTTGTCAAAATTAT+GGG 0.382772 2.1:+17870510 MS.gene069825:CDS
TACTTCCTCAAGATAATAAT+AGG 0.382978 2.1:+17870244 MS.gene069825:CDS
TTTGTGATTCATTGTACCTA+TGG 0.385679 2.1:+17871545 MS.gene069825:CDS
TTTACAGAATCTATACTTGA+AGG 0.394310 2.1:-17870267 None:intergenic
CCAAAACTCCATAAACATAT+AGG 0.406934 2.1:+17871212 MS.gene069825:CDS
ATAATCATGGGGTCTTGAAT+TGG 0.410294 2.1:-17870189 None:intergenic
GCAACAAGGAAAACAGATAT+AGG 0.410679 2.1:-17872399 None:intergenic
ATTTACTCAAGAAGGGTATC+TGG 0.414638 2.1:+17869446 MS.gene069825:CDS
CATCTCAAGATTCAAGATCA+AGG 0.418043 2.1:+17868397 MS.gene069825:CDS
GAGAGACAAAATATGAGAAA+TGG 0.418641 2.1:+17872351 MS.gene069825:CDS
ATCATTACTGCAATCTGGTC+TGG 0.419284 2.1:-17868369 None:intergenic
CATCAAGAAGAATTATCATT+GGG 0.422403 2.1:-17870925 None:intergenic
CAAGAAGGGTATCTGGATAT+AGG 0.425363 2.1:+17869453 MS.gene069825:CDS
CTTGTGATGTGGAGAGATCC+AGG 0.427729 2.1:+17868320 None:intergenic
ATATTCTTGCAGTTTATGCT+TGG 0.433846 2.1:+17870533 MS.gene069825:CDS
TTTCGTCAAATGTACTCTTC+GGG 0.441710 2.1:-17869786 None:intergenic
CTTGATCTTGAATCTTGAGA+TGG 0.445826 2.1:-17868396 None:intergenic
TCATCAAGAAGAATTATCAT+TGG 0.451073 2.1:-17870926 None:intergenic
GCTTGGATAGATAAAGAAGT+TGG 0.451389 2.1:+17870550 MS.gene069825:CDS
TTGACGTGGTACGCACTGAT+AGG 0.451450 2.1:+17870464 MS.gene069825:CDS
TTGTGATTCATTGTACCTAT+GGG 0.454384 2.1:+17871546 MS.gene069825:CDS
TTGTTTCCTCTTGTTGGAAG+TGG 0.462346 2.1:+17870126 MS.gene069825:CDS
ATTTCTTTCAGGCATAATCA+TGG 0.468298 2.1:-17870202 None:intergenic
AGTACAGCTAATCCCTTGTC+TGG 0.469428 2.1:-17870225 None:intergenic
CGAGGAAATTTCAGATGTAC+TGG 0.471593 2.1:+17871128 MS.gene069825:CDS
GGAACATCATTACTGCAATC+TGG 0.472237 2.1:-17868374 None:intergenic
CATGATGCATTTACTCAAGA+AGG 0.472341 2.1:+17869438 MS.gene069825:CDS
ACTCCATGAAGCGCGAGGCT+TGG 0.472658 2.1:+17872452 MS.gene069825:CDS
AAAGAATCAGCTGAAACTCC+TGG 0.480245 2.1:-17868338 None:intergenic
CAGATATTGAATGACACAAC+AGG 0.486107 2.1:+17872771 MS.gene069825:intron
TGGTCGCACTCTTGGGGTGG+AGG 0.488394 2.1:+17871148 MS.gene069825:CDS
GATGGAGAGTTAACATCCAC+TGG 0.490352 2.1:-17870323 None:intergenic
TGGCCATCATCAGTAATTAC+AGG 0.493011 2.1:-17870165 None:intergenic
TTCCAACAAGAGGAAACAAT+TGG 0.498284 2.1:-17870122 None:intergenic
TTTCTTTCAGGCATAATCAT+GGG 0.498518 2.1:-17870201 None:intergenic
TAGGTACAATGAATCACAAA+AGG 0.507991 2.1:-17871542 None:intergenic
GTAAAAGCTGAGGGCGTCAA+AGG 0.527510 2.1:+17872294 MS.gene069825:CDS
TCACCTGTAATTACTGATGA+TGG 0.529934 2.1:+17870162 MS.gene069825:CDS
AGGAAAACAGATATAGGAAG+AGG 0.540547 2.1:-17872393 None:intergenic
GAATTATCATTGGGGAGCAT+AGG 0.542492 2.1:-17870916 None:intergenic
TTGATCTTGAATCTTGAGAT+GGG 0.545349 2.1:-17868395 None:intergenic
ATCAAATAAGAGAACGCCGA+AGG 0.555836 2.1:+17869812 MS.gene069825:CDS
TACTGGTCGCACTCTTGGGG+TGG 0.558646 2.1:+17871145 MS.gene069825:CDS
GAAGGCCTATTATTATCTTG+AGG 0.560973 2.1:-17870249 None:intergenic
TGGAGAACAGAACATATTGG+TGG 0.562536 2.1:+17871463 MS.gene069825:intron
CTTCTCCCCTAATTGATGGA+TGG 0.563411 2.1:-17869735 None:intergenic
TCAGGATGCAATATGCTACA+TGG 0.565622 2.1:+17870085 MS.gene069825:intron
TCATGGGGTCTTGAATTGGT+TGG 0.566507 2.1:-17870185 None:intergenic
TTCTTTCAGGCATAATCATG+GGG 0.568000 2.1:-17870200 None:intergenic
ATGTACTGGTCGCACTCTTG+GGG 0.573792 2.1:+17871142 MS.gene069825:CDS
AAAGAAGTTGGATACGGTCA+AGG 0.579690 2.1:+17870562 MS.gene069825:CDS
TGATTCATTGTACCTATGGG+AGG 0.581982 2.1:+17871549 MS.gene069825:CDS
ATCAGCTTCTGTAAAAGCTG+AGG 0.587749 2.1:+17872284 MS.gene069825:CDS
CTTTCAACACACCAGCAACA+AGG 0.588036 2.1:-17872413 None:intergenic
AATCGACCACTTCCAACAAG+AGG 0.590144 2.1:-17870132 None:intergenic
ATAGATAAAGAAGTTGGATA+CGG 0.592454 2.1:+17870556 MS.gene069825:CDS
AGGCTTGGATGATGTTGTCA+AGG 0.604218 2.1:+17872467 MS.gene069825:CDS
TCAGCTTCTGTAAAAGCTGA+GGG 0.607394 2.1:+17872285 MS.gene069825:CDS
ATGATGCATTTACTCAAGAA+GGG 0.608798 2.1:+17869439 MS.gene069825:CDS
CCTGAAAGAAATCCAGACAA+GGG 0.614978 2.1:+17870213 MS.gene069825:CDS
AGAACAGAACATATTGGTGG+AGG 0.618638 2.1:+17871466 MS.gene069825:intron
AAGCCAGACACACCTCCCAT+AGG 0.625296 2.1:-17871561 None:intergenic
GCCTGAAAGAAATCCAGACA+AGG 0.626590 2.1:+17870212 MS.gene069825:CDS
GGTACGCACTGATAGGACAT+TGG 0.627837 2.1:+17870471 MS.gene069825:CDS
GCAAAGTCAATACGACAATG+TGG 0.656189 2.1:+17872321 MS.gene069825:CDS
CTTTGAGACGAATCTACCGA+GGG 0.661418 2.1:+17869481 MS.gene069825:CDS
CAGACAAGAAACTAATCCAG+TGG 0.668020 2.1:+17870307 MS.gene069825:CDS
ATCAAGAAGAATTATCATTG+GGG 0.677023 2.1:-17870924 None:intergenic
GGAGTCCATCCATCAATTAG+GGG 0.691468 2.1:+17869730 MS.gene069825:CDS
AAACTACTCCATGAAGCGCG+AGG 0.691668 2.1:+17872447 MS.gene069825:CDS
ACTTTGAGACGAATCTACCG+AGG 0.700779 2.1:+17869480 MS.gene069825:CDS
ATACGTTTCAGGTCTTGACG+TGG 0.710991 2.1:+17870450 MS.gene069825:intron
TTTGAGACGAATCTACCGAG+GGG 0.798701 2.1:+17869482 MS.gene069825:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTAAAGTTTTTTTTTATAAA+TGG + chr2.1:17868725-17868744 MS.gene069825:intron 10.0%
!!! TTTTATTCAACAAATTTTAA+TGG - chr2.1:17871387-17871406 None:intergenic 10.0%
!!! TTTTTTTTATTCTAATAAGA+AGG + chr2.1:17870682-17870701 MS.gene069825:intron 10.0%
!! AATTTAACACATACATAAAA+AGG - chr2.1:17872712-17872731 None:intergenic 15.0%
!! ATAAAATACCTATATGTTTA+TGG - chr2.1:17871223-17871242 None:intergenic 15.0%
!! CATATATATATATAGTACTA+CGG + chr2.1:17871875-17871894 MS.gene069825:intron 15.0%
!!! AAAGTTTGATTTTTATTTCT+GGG + chr2.1:17868436-17868455 MS.gene069825:intron 15.0%
!!! AATTTACTGTCTTTTAATTT+TGG + chr2.1:17871443-17871462 MS.gene069825:intron 15.0%
!!! ATATCATAAACTGTTTTAAT+GGG - chr2.1:17872135-17872154 None:intergenic 15.0%
!!! ATTTACATTTTATTGAACAA+TGG + chr2.1:17871609-17871628 MS.gene069825:intron 15.0%
!!! GTTTTTGTTATAATTTTGTT+TGG + chr2.1:17868458-17868477 MS.gene069825:intron 15.0%
!!! TATATCATAAACTGTTTTAA+TGG - chr2.1:17872136-17872155 None:intergenic 15.0%
!! AAACAAAAAATGTTAACTAG+TGG + chr2.1:17872979-17872998 MS.gene069825:intron 20.0%
!! AAGAAAACTTGTCAAAATTA+TGG + chr2.1:17870509-17870528 MS.gene069825:CDS 20.0%
!! AATAAACCAAGTAAACAAAT+TGG + chr2.1:17870712-17870731 MS.gene069825:intron 20.0%
!! ACATTGAAACAATTATGAAA+TGG - chr2.1:17869848-17869867 None:intergenic 20.0%
!! AGAAAACTTGTCAAAATTAT+GGG + chr2.1:17870510-17870529 MS.gene069825:CDS 20.0%
!! ATAATCATCAATACTTTCAA+GGG - chr2.1:17869616-17869635 None:intergenic 20.0%
!! CAGAAATAAAAATCAAACTT+TGG - chr2.1:17868437-17868456 None:intergenic 20.0%
!! CGTAGTACTATATATATATA+TGG - chr2.1:17871877-17871896 None:intergenic 20.0%
!! TAAAAGAGATAATAGAGATA+AGG - chr2.1:17871005-17871024 None:intergenic 20.0%
!! TCACAAAAAATATTTGAGAA+AGG + chr2.1:17872836-17872855 MS.gene069825:CDS 20.0%
!! TGTTAAAAAATTTCAAACCA+GGG + chr2.1:17869709-17869728 MS.gene069825:intron 20.0%
!! TTACCATGTGATTTATATTA+CGG - chr2.1:17870409-17870428 None:intergenic 20.0%
!! TTGTTAAAAAATTTCAAACC+AGG + chr2.1:17869708-17869727 MS.gene069825:intron 20.0%
!! TTTCCATTAATAATTTCTTC+AGG - chr2.1:17871343-17871362 None:intergenic 20.0%
!!! AAATTTTTAACAGATGATGT+GGG + chr2.1:17872215-17872234 MS.gene069825:intron 20.0%
!!! CAAAGTTTGATTTTTATTTC+TGG + chr2.1:17868435-17868454 MS.gene069825:intron 20.0%
!!! CAAGAATTTTTATGTTTATG+TGG + chr2.1:17869666-17869685 MS.gene069825:intron 20.0%
!!! TATCATAAACTGTTTTAATG+GGG - chr2.1:17872134-17872153 None:intergenic 20.0%
!!! TTTAAGATAGTGTCTTTTTT+TGG + chr2.1:17869085-17869104 MS.gene069825:intron 20.0%
!!! TTTTCTTAATTTTGGAAACT+CGG + chr2.1:17869325-17869344 MS.gene069825:intron 20.0%
! AAAAAAAACTACTACTTGCA+TGG - chr2.1:17870666-17870685 None:intergenic 25.0%
! AAAATGTTAACTAGTGGTTA+AGG + chr2.1:17872985-17873004 MS.gene069825:intron 25.0%
! AAATATGATTAAGATCAGAC+AGG - chr2.1:17869582-17869601 None:intergenic 25.0%
! AAATTCACAAACCTATTTGA+TGG - chr2.1:17870344-17870363 None:intergenic 25.0%
! AACGTATTATGTGCATAAAA+AGG - chr2.1:17870437-17870456 None:intergenic 25.0%
! AAGTATGTAATTCAAGTGTT+CGG + chr2.1:17871054-17871073 MS.gene069825:intron 25.0%
! AATAAACTTTAATTGCTTGC+AGG + chr2.1:17873280-17873299 MS.gene069825:intron 25.0%
! AATAGTCATAAGCAATAAGT+TGG - chr2.1:17873113-17873132 None:intergenic 25.0%
! ACGTATTATGTGCATAAAAA+GGG - chr2.1:17870436-17870455 None:intergenic 25.0%
! AGACTTTGCAATAAATGTAT+TGG - chr2.1:17872939-17872958 None:intergenic 25.0%
! ATAGATAAAGAAGTTGGATA+CGG + chr2.1:17870556-17870575 MS.gene069825:CDS 25.0%
! ATCAAGAAGAATTATCATTG+GGG - chr2.1:17870927-17870946 None:intergenic 25.0%
! ATGCCTGAAGAAATTATTAA+TGG + chr2.1:17871337-17871356 MS.gene069825:intron 25.0%
! ATTATTGGATTGATGGAAAT+TGG + chr2.1:17868513-17868532 MS.gene069825:intron 25.0%
! CATAATCATCAATACTTTCA+AGG - chr2.1:17869617-17869636 None:intergenic 25.0%
! CATCAAGAAGAATTATCATT+GGG - chr2.1:17870928-17870947 None:intergenic 25.0%
! CTAACACTATCTCATTAATT+CGG - chr2.1:17871694-17871713 None:intergenic 25.0%
! GATAACATTGTGTGTTAAAT+GGG + chr2.1:17868979-17868998 MS.gene069825:intron 25.0%
! TACTTCCTCAAGATAATAAT+AGG + chr2.1:17870244-17870263 MS.gene069825:CDS 25.0%
! TCATACATCAAGAACAAATA+AGG - chr2.1:17872255-17872274 None:intergenic 25.0%
! TCATCAAGAAGAATTATCAT+TGG - chr2.1:17870929-17870948 None:intergenic 25.0%
! TGAAAAAAACTGTTACATTC+TGG + chr2.1:17872670-17872689 MS.gene069825:intron 25.0%
! TGATAACATTGTGTGTTAAA+TGG + chr2.1:17868978-17868997 MS.gene069825:intron 25.0%
! TTAACACACAATGTTATCAA+CGG - chr2.1:17868977-17868996 None:intergenic 25.0%
! TTTACAGAATCTATACTTGA+AGG - chr2.1:17870270-17870289 None:intergenic 25.0%
! TTTATTGCAAAGTCTTAGAT+TGG + chr2.1:17872944-17872963 MS.gene069825:intron 25.0%
! TTTCTTCAACATAACAAAAG+AGG - chr2.1:17871412-17871431 None:intergenic 25.0%
!! AAACTTTTGTTCATTTTGAG+GGG + chr2.1:17868797-17868816 MS.gene069825:intron 25.0%
!! ACTTCTTGATTGTTATTACA+TGG + chr2.1:17869380-17869399 MS.gene069825:intron 25.0%
!! ACTTTTATGTTTATGTCATC+AGG + chr2.1:17870067-17870086 MS.gene069825:intron 25.0%
!! AGAAACTTTTGTTCATTTTG+AGG + chr2.1:17868795-17868814 MS.gene069825:intron 25.0%
!! AGTTCAAGTAATGATCTTTT+AGG - chr2.1:17870045-17870064 None:intergenic 25.0%
!! ATGCAAATGATTTTGTGTTA+AGG - chr2.1:17869243-17869262 None:intergenic 25.0%
!! GAAACTTTTGTTCATTTTGA+GGG + chr2.1:17868796-17868815 MS.gene069825:intron 25.0%
!! GAAATTTTTAACAGATGATG+TGG + chr2.1:17872214-17872233 MS.gene069825:intron 25.0%
!! TAGAATCGAATTTTCTAACT+CGG + chr2.1:17871275-17871294 MS.gene069825:intron 25.0%
!! TTGTTTCCAATTTGTTTACT+TGG - chr2.1:17870721-17870740 None:intergenic 25.0%
!!! ATCATAAACTGTTTTAATGG+GGG - chr2.1:17872133-17872152 None:intergenic 25.0%
!!! CAATGTTTTAAAAACTCAAC+CGG + chr2.1:17869862-17869881 MS.gene069825:intron 25.0%
!!! CTTGAAAGTATTGATGATTA+TGG + chr2.1:17869615-17869634 MS.gene069825:intron 25.0%
!!! CTTTTGTTATGTTGAAGAAA+TGG + chr2.1:17871412-17871431 MS.gene069825:intron 25.0%
AAACACTAAGTCCAAGAAAA+TGG + chr2.1:17869415-17869434 MS.gene069825:CDS 30.0%
AACAATTCACAATTCTGAAC+AGG + chr2.1:17870884-17870903 MS.gene069825:intron 30.0%
ATATTCTTGCAGTTTATGCT+TGG + chr2.1:17870533-17870552 MS.gene069825:CDS 30.0%
ATGATGCATTTACTCAAGAA+GGG + chr2.1:17869439-17869458 MS.gene069825:CDS 30.0%
ATGTTAACTCTCCATCAAAT+AGG + chr2.1:17870330-17870349 MS.gene069825:CDS 30.0%
ATTTCTTTCAGGCATAATCA+TGG - chr2.1:17870205-17870224 None:intergenic 30.0%
CATATATAGACACATAAGAG+AGG - chr2.1:17872023-17872042 None:intergenic 30.0%
CCAAAACTCCATAAACATAT+AGG + chr2.1:17871212-17871231 MS.gene069825:CDS 30.0%
GAAGTGTATTATTGGATTGA+TGG + chr2.1:17868506-17868525 MS.gene069825:intron 30.0%
GAGAGACAAAATATGAGAAA+TGG + chr2.1:17872351-17872370 MS.gene069825:CDS 30.0%
GTAAAACTATCTGTTGAGTA+TGG - chr2.1:17872048-17872067 None:intergenic 30.0%
TAGGTACAATGAATCACAAA+AGG - chr2.1:17871545-17871564 None:intergenic 30.0%
TAGTACATAACAATGAAGCA+CGG - chr2.1:17868665-17868684 None:intergenic 30.0%
TATAAACTGTTGTTGGGTAT+AGG + chr2.1:17868484-17868503 MS.gene069825:intron 30.0%
TCACCGTAATATAAATCACA+TGG + chr2.1:17870403-17870422 MS.gene069825:intron 30.0%
TGGTGATATAAACTGTTGTT+GGG + chr2.1:17868478-17868497 MS.gene069825:intron 30.0%
TTATGCACATAATACGTTTC+AGG + chr2.1:17870439-17870458 MS.gene069825:intron 30.0%
TTCTCGATATATCAATCTAG+TGG - chr2.1:17870759-17870778 None:intergenic 30.0%
TTGATCTTGAATCTTGAGAT+GGG - chr2.1:17868398-17868417 None:intergenic 30.0%
TTGTGATTCATTGTACCTAT+GGG + chr2.1:17871546-17871565 MS.gene069825:CDS 30.0%
TTTCTTTCAGGCATAATCAT+GGG - chr2.1:17870204-17870223 None:intergenic 30.0%
TTTGTGATTCATTGTACCTA+TGG + chr2.1:17871545-17871564 MS.gene069825:CDS 30.0%
! AAGCAATAAGTTGGCAAAAA+TGG - chr2.1:17873104-17873123 None:intergenic 30.0%
! AAGTTTTACATCGTACCATA+TGG - chr2.1:17873232-17873251 None:intergenic 30.0%
! CCTATATGTTTATGGAGTTT+TGG - chr2.1:17871215-17871234 None:intergenic 30.0%
! GAAGTTTGGGAATTTTTACT+TGG + chr2.1:17869754-17869773 MS.gene069825:CDS 30.0%
! TGAAATTGATGTTCCCTTTT+TGG + chr2.1:17872567-17872586 MS.gene069825:intron 30.0%
! TTAGGTCTAGAATTCAGAAA+TGG - chr2.1:17870027-17870046 None:intergenic 30.0%
! TTGAATGTGTTGACAAGTAT+TGG + chr2.1:17868853-17868872 MS.gene069825:intron 30.0%
! TTGGTGATATAAACTGTTGT+TGG + chr2.1:17868477-17868496 MS.gene069825:intron 30.0%
! TTTCAGATAGTTGATATGTG+AGG + chr2.1:17868830-17868849 MS.gene069825:intron 30.0%
!! ACATAGCTTGTTAACCAAAA+AGG - chr2.1:17872584-17872603 None:intergenic 30.0%
!! AGTACTGATCTATTTCAAAG+AGG - chr2.1:17870598-17870617 None:intergenic 30.0%
!! CATAGCTTGTTAACCAAAAA+GGG - chr2.1:17872583-17872602 None:intergenic 30.0%
!! TTTTGGAGAACAGAACATAT+TGG + chr2.1:17871460-17871479 MS.gene069825:intron 30.0%
AAGCTTAGAGACATTGCAAA+TGG - chr2.1:17870856-17870875 None:intergenic 35.0%
AAGTTGGCAAAAATGGCATA+TGG - chr2.1:17873097-17873116 None:intergenic 35.0%
AGAACGCAAATTGCAAACAA+TGG + chr2.1:17871742-17871761 MS.gene069825:intron 35.0%
AGGAAAACAGATATAGGAAG+AGG - chr2.1:17872396-17872415 None:intergenic 35.0%
AGGAAATCTAGATGCCAAAA+AGG + chr2.1:17872791-17872810 MS.gene069825:CDS 35.0%
ATAATCATGGGGTCTTGAAT+TGG - chr2.1:17870192-17870211 None:intergenic 35.0%
ATATAAGAGCAAATACCCCT+CGG - chr2.1:17869500-17869519 None:intergenic 35.0%
ATATCTGAATCCTAGCTTGA+TGG + chr2.1:17869552-17869571 MS.gene069825:intron 35.0%
ATCAATTAGGGGAGAAGTTT+GGG + chr2.1:17869741-17869760 MS.gene069825:CDS 35.0%
ATCACATGTATCAACGTAGT+TGG - chr2.1:17870639-17870658 None:intergenic 35.0%
CAACTATTCGGTTATTTGAG+TGG - chr2.1:17869955-17869974 None:intergenic 35.0%
CAGATATTGAATGACACAAC+AGG + chr2.1:17872771-17872790 MS.gene069825:intron 35.0%
CATCTCAAGATTCAAGATCA+AGG + chr2.1:17868397-17868416 MS.gene069825:CDS 35.0%
CATGATGCATTTACTCAAGA+AGG + chr2.1:17869438-17869457 MS.gene069825:CDS 35.0%
CGAAATACAGATCTATGTGA+CGG - chr2.1:17873041-17873060 None:intergenic 35.0%
CTAGACTTTCAATCTCACAA+TGG + chr2.1:17869286-17869305 MS.gene069825:intron 35.0%
CTTGATCTTGAATCTTGAGA+TGG - chr2.1:17868399-17868418 None:intergenic 35.0%
CTTTCGTCAAATGTACTCTT+CGG - chr2.1:17869790-17869809 None:intergenic 35.0%
CTTTGCTAAGTTGTCAGTAA+TGG + chr2.1:17869010-17869029 MS.gene069825:intron 35.0%
GAAGGCCTATTATTATCTTG+AGG - chr2.1:17870252-17870271 None:intergenic 35.0%
GAGAATACGAAGATTGTACA+AGG - chr2.1:17872884-17872903 None:intergenic 35.0%
GCAACAAGGAAAACAGATAT+AGG - chr2.1:17872402-17872421 None:intergenic 35.0%
GCTTGGATAGATAAAGAAGT+TGG + chr2.1:17870550-17870569 MS.gene069825:CDS 35.0%
GTTTAACTGGTTGAACTGTA+TGG + chr2.1:17869991-17870010 MS.gene069825:intron 35.0%
TCACCTGTAATTACTGATGA+TGG + chr2.1:17870162-17870181 MS.gene069825:CDS 35.0%
TGCAACCTTGCAACAAATAA+TGG + chr2.1:17870817-17870836 MS.gene069825:intron 35.0%
TTCCAACAAGAGGAAACAAT+TGG - chr2.1:17870125-17870144 None:intergenic 35.0%
TTCTTTCAGGCATAATCATG+GGG - chr2.1:17870203-17870222 None:intergenic 35.0%
TTGCAAGGTTGCAAGAAAAA+TGG - chr2.1:17870810-17870829 None:intergenic 35.0%
TTTCGTCAAATGTACTCTTC+GGG - chr2.1:17869789-17869808 None:intergenic 35.0%
TTTCTCAGTAGTTAGCCATA+TGG + chr2.1:17873214-17873233 MS.gene069825:intron 35.0%
! ACTTGCCATTATTTGTTGCA+AGG - chr2.1:17870825-17870844 None:intergenic 35.0%
! ATATCTGTTTTCCTTGTTGC+TGG + chr2.1:17872402-17872421 MS.gene069825:CDS 35.0%
! ATGTTGTCAAGGTTAGTCAT+GGG + chr2.1:17872478-17872497 MS.gene069825:intron 35.0%
! CGAATTTTCTAACTCGGTTT+GGG + chr2.1:17871281-17871300 MS.gene069825:intron 35.0%
! CTTGTGCACTATTTTGTAGT+AGG + chr2.1:17870369-17870388 MS.gene069825:intron 35.0%
! GGGTATAGGAAGTGTATTAT+TGG + chr2.1:17868498-17868517 MS.gene069825:intron 35.0%
! GTATCCATCATGGTGTTTTA+TGG + chr2.1:17868926-17868945 MS.gene069825:intron 35.0%
! GTCTAGAATTCAGAAATGGT+GGG - chr2.1:17870023-17870042 None:intergenic 35.0%
! TCGAATTTTCTAACTCGGTT+TGG + chr2.1:17871280-17871299 MS.gene069825:intron 35.0%
! TGATTGTTATTACATGGCTC+AGG + chr2.1:17869386-17869405 MS.gene069825:intron 35.0%
!! ATTGTGTGTTAAATGGGTTG+TGG + chr2.1:17868985-17869004 MS.gene069825:intron 35.0%
!! ATTTACTCAAGAAGGGTATC+TGG + chr2.1:17869446-17869465 MS.gene069825:CDS 35.0%
!! ATTTGCTTTTCGGATGCTTA+TGG + chr2.1:17871498-17871517 MS.gene069825:CDS 35.0%
!! GAGCTTGTTAAGTTGATAAC+AGG + chr2.1:17868771-17868790 MS.gene069825:intron 35.0%
!! GCGACTATGTATTTGCTTTT+CGG + chr2.1:17871488-17871507 MS.gene069825:CDS 35.0%
!!! AATGCATCATGCCATTTTCT+TGG - chr2.1:17869429-17869448 None:intergenic 35.0%
!!! GGATTTTTTGACAATCTCCA+TGG + chr2.1:17868883-17868902 MS.gene069825:intron 35.0%
!!! GTTGTCAGTAATGGTTTTGT+TGG + chr2.1:17869019-17869038 MS.gene069825:intron 35.0%
AAAGAAGTTGGATACGGTCA+AGG + chr2.1:17870562-17870581 MS.gene069825:CDS 40.0%
AAAGAATCAGCTGAAACTCC+TGG - chr2.1:17868341-17868360 None:intergenic 40.0%
AAATGGAAGCTGACTACCTT+CGG - chr2.1:17869831-17869850 None:intergenic 40.0%
AACCGAATAGTTGACAGCAT+CGG + chr2.1:17869962-17869981 MS.gene069825:intron 40.0%
AACCGATGCTGTCAACTATT+CGG - chr2.1:17869967-17869986 None:intergenic 40.0%
AATAACACGCAAGATGTCAG+AGG - chr2.1:17872746-17872765 None:intergenic 40.0%
ACACACAATGTTATCAACGG+AGG - chr2.1:17868974-17868993 None:intergenic 40.0%
ACTGGTTGAACTGTATGGTT+CGG + chr2.1:17869996-17870015 MS.gene069825:intron 40.0%
AGAACAGAACATATTGGTGG+AGG + chr2.1:17871466-17871485 MS.gene069825:intron 40.0%
ATAGACACATAAGAGAGGCA+AGG - chr2.1:17872018-17872037 None:intergenic 40.0%
ATCAAATAAGAGAACGCCGA+AGG + chr2.1:17869812-17869831 MS.gene069825:CDS 40.0%
ATCAACACTGCACACCTAAA+AGG - chr2.1:17868608-17868627 None:intergenic 40.0%
ATCAGCTTCTGTAAAAGCTG+AGG + chr2.1:17872284-17872303 MS.gene069825:CDS 40.0%
ATCATTACTGCAATCTGGTC+TGG - chr2.1:17868372-17868391 None:intergenic 40.0%
CAAACTTCTCCCCTAATTGA+TGG - chr2.1:17869742-17869761 None:intergenic 40.0%
CAGACAAGAAACTAATCCAG+TGG + chr2.1:17870307-17870326 MS.gene069825:CDS 40.0%
CAGATCTATGTGACGGTAAA+TGG - chr2.1:17873034-17873053 None:intergenic 40.0%
CATAGTTCAACCACTCAAAC+CGG + chr2.1:17869911-17869930 MS.gene069825:intron 40.0%
CATCAATTAGGGGAGAAGTT+TGG + chr2.1:17869740-17869759 MS.gene069825:CDS 40.0%
CCTAAAAGGCTTTCAATCAG+AGG - chr2.1:17868594-17868613 None:intergenic 40.0%
CCTGAAAGAAATCCAGACAA+GGG + chr2.1:17870213-17870232 MS.gene069825:CDS 40.0%
CGAGGAAATTTCAGATGTAC+TGG + chr2.1:17871128-17871147 MS.gene069825:CDS 40.0%
GAGACATTGCAAATGGTGTT+TGG - chr2.1:17870849-17870868 None:intergenic 40.0%
GATAGTGTTAGAACACCAAC+TGG + chr2.1:17871703-17871722 MS.gene069825:intron 40.0%
GATTGTCAAAAAATCCGCCA+TGG - chr2.1:17868879-17868898 None:intergenic 40.0%
GGAACATCATTACTGCAATC+TGG - chr2.1:17868377-17868396 None:intergenic 40.0%
GGAGGCTCAACTAAGTAATT+TGG + chr2.1:17871166-17871185 MS.gene069825:CDS 40.0%
GGATTGATGGAAATTGGTGT+TGG + chr2.1:17868519-17868538 MS.gene069825:intron 40.0%
GTTTGACTGTTGTTCTGTTC+CGG - chr2.1:17869933-17869952 None:intergenic 40.0%
TAGACACATAAGAGAGGCAA+GGG - chr2.1:17872017-17872036 None:intergenic 40.0%
TCAGCTTCTGTAAAAGCTGA+GGG + chr2.1:17872285-17872304 MS.gene069825:CDS 40.0%
TCAGGATGCAATATGCTACA+TGG + chr2.1:17870085-17870104 MS.gene069825:intron 40.0%
TCCACCATAAAACACCATGA+TGG - chr2.1:17868933-17868952 None:intergenic 40.0%
TGATTCATTGTACCTATGGG+AGG + chr2.1:17871549-17871568 MS.gene069825:CDS 40.0%
TGGAGAACAGAACATATTGG+TGG + chr2.1:17871463-17871482 MS.gene069825:intron 40.0%
TGGCCATCATCAGTAATTAC+AGG - chr2.1:17870168-17870187 None:intergenic 40.0%
TTGTTTCCTCTTGTTGGAAG+TGG + chr2.1:17870126-17870145 MS.gene069825:CDS 40.0%
! ATGATGAAGCAGACGCATTT+TGG + chr2.1:17870945-17870964 MS.gene069825:CDS 40.0%
! CCTCTGATTGAAAGCCTTTT+AGG + chr2.1:17868591-17868610 MS.gene069825:intron 40.0%
! GAATTATCATTGGGGAGCAT+AGG - chr2.1:17870919-17870938 None:intergenic 40.0%
! GATGTTGTCAAGGTTAGTCA+TGG + chr2.1:17872477-17872496 MS.gene069825:intron 40.0%
! GGTCTAGAATTCAGAAATGG+TGG - chr2.1:17870024-17870043 None:intergenic 40.0%
! TCCATCATGGTGTTTTATGG+TGG + chr2.1:17868929-17868948 MS.gene069825:intron 40.0%
! TTTCATTTTCCGCTACCAGT+TGG - chr2.1:17871721-17871740 None:intergenic 40.0%
!! CAAGAAGGGTATCTGGATAT+AGG + chr2.1:17869453-17869472 MS.gene069825:CDS 40.0%
!! GTTCTTGAACTTTTCAAGCG+AGG + chr2.1:17871110-17871129 MS.gene069825:intron 40.0%
!!! ATTTTCTAACTCGGTTTGGG+TGG + chr2.1:17871284-17871303 MS.gene069825:intron 40.0%
AAGTTGGATACGGTCAAGGT+GGG + chr2.1:17870566-17870585 MS.gene069825:intron 45.0%
AATCGACCACTTCCAACAAG+AGG - chr2.1:17870135-17870154 None:intergenic 45.0%
ACGGACACAAACATGAACAC+CGG - chr2.1:17868646-17868665 None:intergenic 45.0%
AGACACATAAGAGAGGCAAG+GGG - chr2.1:17872016-17872035 None:intergenic 45.0%
AGGCTTGGATGATGTTGTCA+AGG + chr2.1:17872467-17872486 MS.gene069825:CDS 45.0%
AGGGAGTCCATCCATCAATT+AGG + chr2.1:17869728-17869747 MS.gene069825:intron 45.0%
AGTACAGCTAATCCCTTGTC+TGG - chr2.1:17870228-17870247 None:intergenic 45.0%
ATGTTATCAACGGAGGATCG+CGG - chr2.1:17868967-17868986 None:intergenic 45.0%
CATCCTTCACAAATTGGCCA+TGG - chr2.1:17868903-17868922 None:intergenic 45.0%
CATGGCCAATTTGTGAAGGA+TGG + chr2.1:17868901-17868920 MS.gene069825:intron 45.0%
CATTGAACTGACAAGACCTG+TGG + chr2.1:17869886-17869905 MS.gene069825:intron 45.0%
CCCTTGTCTGGATTTCTTTC+AGG - chr2.1:17870216-17870235 None:intergenic 45.0%
CGCCAATTGTTTCCTCTTGT+TGG + chr2.1:17870120-17870139 MS.gene069825:CDS 45.0%
CTTCTCCCCTAATTGATGGA+TGG - chr2.1:17869738-17869757 None:intergenic 45.0%
CTTTCAACACACCAGCAACA+AGG - chr2.1:17872416-17872435 None:intergenic 45.0%
GATGGAGAGTTAACATCCAC+TGG - chr2.1:17870326-17870345 None:intergenic 45.0%
GCCTGAAAGAAATCCAGACA+AGG + chr2.1:17870212-17870231 MS.gene069825:CDS 45.0%
GGAGTCCATCCATCAATTAG+GGG + chr2.1:17869730-17869749 MS.gene069825:CDS 45.0%
GGGAGTCCATCCATCAATTA+GGG + chr2.1:17869729-17869748 MS.gene069825:intron 45.0%
GTTAGAACACCAACTGGTAG+CGG + chr2.1:17871709-17871728 MS.gene069825:intron 45.0%
TACCGCCATCCTTCACAAAT+TGG - chr2.1:17868909-17868928 None:intergenic 45.0%
TAGCTGCTCTATAGTCGTAG+AGG - chr2.1:17871809-17871828 None:intergenic 45.0%
TCATGGGGTCTTGAATTGGT+TGG - chr2.1:17870188-17870207 None:intergenic 45.0%
TCTCCATGGCCAATTTGTGA+AGG + chr2.1:17868897-17868916 MS.gene069825:intron 45.0%
TGATGTGTATGTGTCGTGTC+CGG + chr2.1:17868624-17868643 MS.gene069825:intron 45.0%
TGTTATTACATGGCTCAGGC+TGG + chr2.1:17869390-17869409 MS.gene069825:intron 45.0%
! ATACGTTTCAGGTCTTGACG+TGG + chr2.1:17870450-17870469 MS.gene069825:intron 45.0%
! GACAGGTTTTCCATCAAGCT+AGG - chr2.1:17869565-17869584 None:intergenic 45.0%
! GGTCTTGTCAGTTCAATGTC+CGG - chr2.1:17869884-17869903 None:intergenic 45.0%
! GTCGTAGAGGTATGCACAAT+CGG - chr2.1:17871796-17871815 None:intergenic 45.0%
! TAATTGATGGATGGACTCCC+TGG - chr2.1:17869729-17869748 None:intergenic 45.0%
! TTGTCAAGGTTAGTCATGGG+AGG + chr2.1:17872481-17872500 MS.gene069825:intron 45.0%
! TTGTTCTGTTCCGGTTTGAG+TGG - chr2.1:17869924-17869943 None:intergenic 45.0%
! TTTGAGACGAATCTACCGAG+GGG + chr2.1:17869482-17869501 MS.gene069825:CDS 45.0%
!! ACTTTGAGACGAATCTACCG+AGG + chr2.1:17869480-17869499 MS.gene069825:CDS 45.0%
!! CTTTGAGACGAATCTACCGA+GGG + chr2.1:17869481-17869500 MS.gene069825:CDS 45.0%
!! GTGTTGACAAGTATTGGCCA+TGG + chr2.1:17868859-17868878 MS.gene069825:intron 45.0%
!! TAGTTGACAGCATCGGTTCA+CGG + chr2.1:17869969-17869988 MS.gene069825:intron 45.0%
!! TGGCGATGCTACTTTGTTGA+GGG + chr2.1:17869039-17869058 MS.gene069825:intron 45.0%
!! TTGACAAGTATTGGCCATGG+CGG + chr2.1:17868862-17868881 MS.gene069825:intron 45.0%
!! TTGGCGATGCTACTTTGTTG+AGG + chr2.1:17869038-17869057 MS.gene069825:intron 45.0%
!!! TTTTTTATTTTTCTTAATTT+TGG + chr2.1:17869317-17869336 MS.gene069825:intron 5.0%
AAACTACTCCATGAAGCGCG+AGG + chr2.1:17872447-17872466 MS.gene069825:CDS 50.0%
CACGCAAGATGTCAGAGGAA+CGG - chr2.1:17872741-17872760 None:intergenic 50.0%
GAAGTTGGATACGGTCAAGG+TGG + chr2.1:17870565-17870584 MS.gene069825:intron 50.0%
GGCCAATTTGTGAAGGATGG+CGG + chr2.1:17868904-17868923 MS.gene069825:intron 50.0%
GTGGTTGAACTATGAGCCAC+AGG - chr2.1:17869905-17869924 None:intergenic 50.0%
TCTTAGGCCCGACTGTTTGT+CGG - chr2.1:17871954-17871973 None:intergenic 50.0%
TGCCAAAAAGGCTTGCGTTG+AGG + chr2.1:17872803-17872822 MS.gene069825:CDS 50.0%
! AAGGATGGCGGTATCCATCA+TGG + chr2.1:17868916-17868935 MS.gene069825:intron 50.0%
! AGATGTACTGGTCGCACTCT+TGG + chr2.1:17871140-17871159 MS.gene069825:CDS 50.0%
! AGCCTCAACGCAAGCCTTTT+TGG - chr2.1:17872808-17872827 None:intergenic 50.0%
! ATGTACTGGTCGCACTCTTG+GGG + chr2.1:17871142-17871161 MS.gene069825:CDS 50.0%
! GATGTACTGGTCGCACTCTT+GGG + chr2.1:17871141-17871160 MS.gene069825:CDS 50.0%
! GGTACGCACTGATAGGACAT+TGG + chr2.1:17870471-17870490 MS.gene069825:CDS 50.0%
! TTGACGTGGTACGCACTGAT+AGG + chr2.1:17870464-17870483 MS.gene069825:CDS 50.0%
!! GCATCGGTTCACGGTTTAAC+TGG + chr2.1:17869978-17869997 MS.gene069825:intron 50.0%
!! GTAAAAGCTGAGGGCGTCAA+AGG + chr2.1:17872294-17872313 MS.gene069825:CDS 50.0%
AAGCCAGACACACCTCCCAT+AGG - chr2.1:17871564-17871583 None:intergenic 55.0%
AATACCCCTGAACCGTACCG+CGG + chr2.1:17871911-17871930 MS.gene069825:intron 55.0%
ACATAAGAGAGGCAAGGGGC+GGG - chr2.1:17872012-17872031 None:intergenic 55.0%
CACATAAGAGAGGCAAGGGG+CGG - chr2.1:17872013-17872032 None:intergenic 55.0%
CTTAGGCCCGACTGTTTGTC+GGG - chr2.1:17871953-17871972 None:intergenic 55.0%
CTTGCAGGCCAAGAAAGCCT+AGG + chr2.1:17873295-17873314 MS.gene069825:intron 55.0%
TGAGCTAGCAAAGCTCCCTC+CGG - chr2.1:17871985-17872004 None:intergenic 55.0%
TTAGGCCCGACTGTTTGTCG+GGG - chr2.1:17871952-17871971 None:intergenic 55.0%
! GTACCTATGGGAGGTGTGTC+TGG + chr2.1:17871558-17871577 MS.gene069825:intron 55.0%
ACTCCATGAAGCGCGAGGCT+TGG + chr2.1:17872452-17872471 MS.gene069825:CDS 60.0%
ATACCCCTGAACCGTACCGC+GGG + chr2.1:17871912-17871931 MS.gene069825:intron 60.0%
CAGTCGGGCCTAAGACACCA+AGG + chr2.1:17871959-17871978 MS.gene069825:intron 60.0%
CATAAGAGAGGCAAGGGGCG+GGG - chr2.1:17872011-17872030 None:intergenic 60.0%
CATCCAAGCCTCGCGCTTCA+TGG - chr2.1:17872458-17872477 None:intergenic 60.0%
CCTAAGACACCAAGGCCGGA+GGG + chr2.1:17871967-17871986 MS.gene069825:intron 60.0%
TACTGGTCGCACTCTTGGGG+TGG + chr2.1:17871145-17871164 MS.gene069825:CDS 60.0%
TAGGCCCGACTGTTTGTCGG+GGG - chr2.1:17871951-17871970 None:intergenic 60.0%
AGCAAAGCTCCCTCCGGCCT+TGG - chr2.1:17871979-17871998 None:intergenic 65.0%
ATCCCCCGCGGTACGGTTCA+GGG - chr2.1:17871919-17871938 None:intergenic 65.0%
CCCCTCCCCCGACAAACAGT+CGG + chr2.1:17871943-17871962 MS.gene069825:intron 65.0%
CCCGACTGTTTGTCGGGGGA+GGG - chr2.1:17871947-17871966 None:intergenic 65.0%
CCCTCCCCCGACAAACAGTC+GGG + chr2.1:17871944-17871963 MS.gene069825:intron 65.0%
CCGACTGTTTGTCGGGGGAG+GGG - chr2.1:17871946-17871965 None:intergenic 65.0%
CGACTGTTTGTCGGGGGAGG+GGG - chr2.1:17871945-17871964 None:intergenic 65.0%
CGGGCCTAAGACACCAAGGC+CGG + chr2.1:17871963-17871982 MS.gene069825:intron 65.0%
GACTGTTTGTCGGGGGAGGG+GGG - chr2.1:17871944-17871963 None:intergenic 65.0%
GCCTAAGACACCAAGGCCGG+AGG + chr2.1:17871966-17871985 MS.gene069825:intron 65.0%
TACCCCTGAACCGTACCGCG+GGG + chr2.1:17871913-17871932 MS.gene069825:intron 65.0%
TATCCCCCGCGGTACGGTTC+AGG - chr2.1:17871920-17871939 None:intergenic 65.0%
TGGTCGCACTCTTGGGGTGG+AGG + chr2.1:17871148-17871167 MS.gene069825:CDS 65.0%
!! CCCTCCGGCCTTGGTGTCTT+AGG - chr2.1:17871970-17871989 None:intergenic 65.0%
ACCCCTGAACCGTACCGCGG+GGG + chr2.1:17871914-17871933 MS.gene069825:intron 70.0%
GCCCGACTGTTTGTCGGGGG+AGG - chr2.1:17871948-17871967 None:intergenic 70.0%
GGGGGATATCCCCCGCGGTA+CGG - chr2.1:17871926-17871945 None:intergenic 70.0%
TCCCCCGCGGTACGGTTCAG+GGG - chr2.1:17871918-17871937 None:intergenic 70.0%
GGGAGGGGGGATATCCCCCG+CGG - chr2.1:17871931-17871950 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 17868326 17873316 17868326 ID=MS.gene069825
chr2.1 mRNA 17868326 17873316 17868326 ID=MS.gene069825.t1;Parent=MS.gene069825
chr2.1 exon 17868326 17868418 17868326 ID=MS.gene069825.t1.exon1;Parent=MS.gene069825.t1
chr2.1 CDS 17868326 17868418 17868326 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
chr2.1 exon 17869408 17869503 17869408 ID=MS.gene069825.t1.exon2;Parent=MS.gene069825.t1
chr2.1 CDS 17869408 17869503 17869408 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
chr2.1 exon 17869730 17869833 17869730 ID=MS.gene069825.t1.exon3;Parent=MS.gene069825.t1
chr2.1 CDS 17869730 17869833 17869730 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
chr2.1 exon 17870089 17870351 17870089 ID=MS.gene069825.t1.exon4;Parent=MS.gene069825.t1
chr2.1 CDS 17870089 17870351 17870089 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
chr2.1 exon 17870461 17870583 17870461 ID=MS.gene069825.t1.exon5;Parent=MS.gene069825.t1
chr2.1 CDS 17870461 17870583 17870461 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
chr2.1 exon 17870906 17870994 17870906 ID=MS.gene069825.t1.exon6;Parent=MS.gene069825.t1
chr2.1 CDS 17870906 17870994 17870906 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
chr2.1 exon 17871128 17871233 17871128 ID=MS.gene069825.t1.exon7;Parent=MS.gene069825.t1
chr2.1 CDS 17871128 17871233 17871128 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
chr2.1 exon 17871473 17871570 17871473 ID=MS.gene069825.t1.exon8;Parent=MS.gene069825.t1
chr2.1 CDS 17871473 17871570 17871473 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
chr2.1 exon 17872228 17872488 17872228 ID=MS.gene069825.t1.exon9;Parent=MS.gene069825.t1
chr2.1 CDS 17872228 17872488 17872228 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
chr2.1 exon 17872774 17872857 17872774 ID=MS.gene069825.t1.exon10;Parent=MS.gene069825.t1
chr2.1 CDS 17872774 17872857 17872774 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
chr2.1 exon 17873302 17873316 17873302 ID=MS.gene069825.t1.exon11;Parent=MS.gene069825.t1
chr2.1 CDS 17873302 17873316 17873302 ID=cds.MS.gene069825.t1;Parent=MS.gene069825.t1
Gene Sequence

>MS.gene069825

ATGTGGAGAGATCCAGGAGTTTCAGCTGATTCTTTCTATGAAACCAGACCAGATTGCAGTAATGATGTTCCCATCTCAAGATTCAAGATCAAGGTTTGTTTTTTCACTCCAAAGTTTGATTTTTATTTCTGGGTTTTTGTTATAATTTTGTTTGGTGATATAAACTGTTGTTGGGTATAGGAAGTGTATTATTGGATTGATGGAAATTGGTGTTGGTGTTTTATCAGCAATGTATGTTATGTACTGTATATATGTAGCACTGACACCTCTGATTGAAAGCCTTTTAGGTGTGCAGTGTTGATGTGTATGTGTCGTGTCCGGTGTTCATGTTTGTGTCCGTGCTTCATTGTTATGTACTAGATATGATGTTTTGTGAATGCATTTGTTCATTTACGATTACTAAAGTTTTTTTTTATAAATGGTATATGTGTTTCTAAGCTATATTGAGCTTGTTAAGTTGATAACAGGTAGAAACTTTTGTTCATTTTGAGGGGTAGATTGTGATTTCAGATAGTTGATATGTGAGGTTGAATGTGTTGACAAGTATTGGCCATGGCGGATTTTTTGACAATCTCCATGGCCAATTTGTGAAGGATGGCGGTATCCATCATGGTGTTTTATGGTGGATTTTTAGCTGTCCGCGATCCTCCGTTGATAACATTGTGTGTTAAATGGGTTGTGGAACTTTGCTAAGTTGTCAGTAATGGTTTTGTTGGCGATGCTACTTTGTTGAGGGAGAAAAATATTTTGATTTTAGTCTTTAAGATAGTGTCTTTTTTTGGTTGTTATGAATTTCAAATTCAGTCTTGTAATGTATCATTGTCATCGATGAATTTTGATTCATTGACAGTAGTTTATTGTTCAAAGTCATCGATAAAACATTAAATGACGTAAATCAATTTGACGATTTTACACCTTAACACAAAATCATTTGCATTCAGATACAGACTTCTAATCTATCTAGACTTTCAATCTCACAATGGTTGTATTTTTTTTTATTTTTCTTAATTTTGGAAACTCGGTACAATGATTGTATATTGTTCTTTTATTTTTAACTTCTTGATTGTTATTACATGGCTCAGGCTGGTAAAACACTAAGTCCAAGAAAATGGCATGATGCATTTACTCAAGAAGGGTATCTGGATATAGGCAAGACTTTGAGACGAATCTACCGAGGGGTATTTGCTCTTATATAGTCTCTCTTTTTCAATTTGTTCAAATACTGAATATCTGAATCCTAGCTTGATGGAAAACCTGTCTGATCTTAATCATATTTTTGTTTTAATACCCTTGAAAGTATTGATGATTATGGTTTTCTTGTGTATACAAGTGTAGAAAGACAAGAATTTTTATGTTTATGTGGCTCTGTGTTAGTCGTTAATTTGTTAAAAAATTTCAAACCAGGGAGTCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTTTACTTGGTTGCTATGACCCGAAGAGTACATTTGACGAAAGAGATCAAATAAGAGAACGCCGAAGGTAGTCAGCTTCCATTTCATAATTGTTTCAATGTTTTAAAAACTCAACCGGACATTGAACTGACAAGACCTGTGGCTCATAGTTCAACCACTCAAACCGGAACAGAACAACAGTCAAACCACTCAAATAACCGAATAGTTGACAGCATCGGTTCACGGTTTAACTGGTTGAACTGTATGGTTCGGTCCCACCATTTCTGAATTCTAGACCTAAAAGATCATTACTTGAACTTGACTTTTATGTTTATGTCATCAGGATGCAATATGCTACATGGAAAGAAGAATGTCGCCAATTGTTTCCTCTTGTTGGAAGTGGTCGATTTATCACATCACCTGTAATTACTGATGATGGCCAACCAATTCAAGACCCCATGATTATGCCTGAAAGAAATCCAGACAAGGGATTAGCTGTACTTCCTCAAGATAATAATAGGCCTTCAAGTATAGATTCTGTAAATAATTTAGAAAATGTGACAGACAAGAAACTAATCCAGTGGATGTTAACTCTCCATCAAATAGGTTTGTGAATTTTTTTTCTTGTGCACTATTTTGTAGTAGGATGAAATCATATCACCGTAATATAAATCACATGGTAAATGACCCTTTTTATGCACATAATACGTTTCAGGTCTTGACGTGGTACGCACTGATAGGACATTGGTTTTTTATGAGAAACAAGAAAACTTGTCAAAATTATGGGATATTCTTGCAGTTTATGCTTGGATAGATAAAGAAGTTGGATACGGTCAAGGTGGGTTTTTACCTCTTTGAAATAGATCAGTACTATATTTAGATACTTCTATCCAACTACGTTGATACATGTGATAATTCCATGCAAGTAGTAGTTTTTTTTTTTTATTCTAATAAGAAGGAAACATGAATAAACCAAGTAAACAAATTGGAAACAAGAGAGAAGAAAACATCCACTAGATTGATATATCGAGAACTTACTCGTTTATGTATTAGTTTTACTTCCATTTTTCTTGCAACCTTGCAACAAATAATGGCAAGTTCCAAACACCATTTGCAATGTCTCTAAGCTTCTAATTTTAACAATTCACAATTCTGAACAGGAATGAGTGACCTATGCTCCCCAATGATAATTCTTCTTGATGATGAAGCAGACGCATTTTGGTGCTTTGAGCGTCTGATGCGCAGACTTGTAAACACCTTATCTCTATTATCTCTTTTATCTTTATTTCGTTTTACAAAGATAGAAAAAAGTATGTAATTCAAGTGTTCGGTTATCAGCTTTTTCACAATTTCTTATGATTCATGTTCTTGAACTTTTCAAGCGAGGAAATTTCAGATGTACTGGTCGCACTCTTGGGGTGGAGGCTCAACTAAGTAATTTGGCTTCAATTACTCAAGTAGTTGATCCAAAACTCCATAAACATATAGGTATTTTATTGCACGTGTGATTTTGTATTTATGATCAAATATAGAATCGAATTTTCTAACTCGGTTTGGGTGGTTTTTACTGTGATTGTTGTTTTAAGATATGATGCCTGAAGAAATTATTAATGGAAAATGAAATGACTAGTTTTTTTGCCATTAAAATTTGTTGAATAAAATTCCTCTTTTGTTATGTTGAAGAAATGGAAAGTAACAATTTACTGTCTTTTAATTTTGGAGAACAGAACATATTGGTGGAGGCGACTATGTATTTGCTTTTCGGATGCTTATGGTTCTGTTTCGTCGAGAATTTTCCTTTTGTGATTCATTGTACCTATGGGAGGTGTGTCTGGCTTCTTTTGTTCATTTTTTTATATATTCATTTACATTTTATTGAACAATGGATCATTGAGTTGCTTTCTGCATTCGTGAATCAGATAGTTATTGATATAGTGTATAGCATCCGAATTAATGAGATAGTGTTAGAACACCAACTGGTAGCGGAAAATGAAAGAGAACGCAAATTGCAAACAATGGTACATGATCGTTTGCTTACACAGTTAAGCCGATTGTGCATACCTCTACGACTATAGAGCAGCTATAGTTCTGTAACACTTGAGTGAATTAAGATTTACAAAGTTACAAGCCATATATATATATAGTACTACGGTTTACATTAGAACAATACCCCTGAACCGTACCGCGGGGGATATCCCCCCTCCCCCGACAAACAGTCGGGCCTAAGACACCAAGGCCGGAGGGAGCTTTGCTAGCTCAACTCCCCGCCCCTTGCCTCTCTTATGTGTCTATATATGAGCCATACTCAACAGATAGTTTTACGTAGTTCGCTTTCTGTAAATATGTGTTATGTATGCATTGTGTGTGTTTGATGATTTTTTTTTCCCCCATTAAAACAGTTTATGATATAACAATATCTCAATTTTTTTGAGAATCTTTGTAAAATGATAATTGATAAATAATAGCTTGAAATTTTTAACAGATGATGTGGGCTCTAGAGTATGATCCTTATTTGTTCTTGATGTATGAAGAAGCTCAATCAGCTTCTGTAAAAGCTGAGGGCGTCAAAGGAAAAGCAAAGTCAATACGACAATGTGGAAAATACGAGAGACAAAATATGAGAAATGGAGCAAAGAATGCTGAATCTCCTCTTCCTATATCTGTTTTCCTTGTTGCTGGTGTGTTGAAAGATAAAAGTACAAAACTACTCCATGAAGCGCGAGGCTTGGATGATGTTGTCAAGGTTAGTCATGGGAGGTGACATCTAAAGCATAAGTTGCATTGAACTAGATGTAGCAATCATTGATACAGAACAAAATAATGAAATTGATGTTCCCTTTTTGGTTAACAAGCTATGTGAATTTTAATGCTACTTCATTTATTTCATTGTGACATTATTGCTTTAGACTTGAGATTTTTTTTTTTGAAAAAAACTGTTACATTCTGGTAACAAATTTAGCTGTCCTTTTTATGTATGTGTTAAATTGTTTCTCCGTTCCTCTGACATCTTGCGTGTTATTGTTCTCAGATATTGAATGACACAACAGGAAATCTAGATGCCAAAAAGGCTTGCGTTGAGGCTATGAAGCTTCACAAAAAATATTTGAGAAAGGTAATGTGTTCTCTGCAACTTCTCCTTGTACAATCTTCGTATTCTCTAACAAATCTTGTTTTAGACATGTTGTAATCTCCAATACATTTATTGCAAAGTCTTAGATTGGTTACATTATATAAAACAAAAAATGTTAACTAGTGGTTAAGGTCACTTGTTAACAATATGTTTGACCATTTACCGTCACATAGATCTGTATTTCGCGTTGCATCTATCTCGACATTTACTTTCTTAAACCATATGCCATTTTTGCCAACTTATTGCTTATGACTATTATCATTTACATTGATGCATCGATGATAATTGCACTGACTAAATTATATCTAACTATATGTCACTTTGTTATACACTTAAAATTTCTCAGTAGTTAGCCATATGGTACGATGTAAAACTTTCTTATTTATCTATCTGCTAAATATACAAATAAACTTTAATTGCTTGCAGGCCAAGAAAGCCTAG

Protein sequence

>MS.gene069825.t1

MWRDPGVSADSFYETRPDCSNDVPISRFKIKAGKTLSPRKWHDAFTQEGYLDIGKTLRRIYRGGVHPSIRGEVWEFLLGCYDPKSTFDERDQIRERRRMQYATWKEECRQLFPLVGSGRFITSPVITDDGQPIQDPMIMPERNPDKGLAVLPQDNNRPSSIDSVNNLENVTDKKLIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKEVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTGRTLGVEAQLSNLASITQVVDPKLHKHIEHIGGGDYVFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPYLFLMYEEAQSASVKAEGVKGKAKSIRQCGKYERQNMRNGAKNAESPLPISVFLVAGVLKDKSTKLLHEARGLDDVVKILNDTTGNLDAKKACVEAMKLHKKYLRKAKKA