Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69823.t1 | XP_003596653.1 | 98.2 | 443 | 8 | 0 | 1 | 443 | 1 | 443 | 4.70E-256 | 893.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69823.t1 | Q9CXF4 | 29.6 | 301 | 151 | 5 | 30 | 327 | 294 | 536 | 1.5e-32 | 142.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69823.t1 | G7IJN4 | 98.2 | 443 | 8 | 0 | 1 | 443 | 1 | 443 | 3.4e-256 | 893.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049350 | MS.gene69823 | 0.804159 | 2.47E-49 | -1.69E-46 |
MS.gene049807 | MS.gene69823 | 0.823973 | 1.04E-53 | -1.69E-46 |
MS.gene050945 | MS.gene69823 | 0.83438 | 3.10E-56 | -1.69E-46 |
MS.gene051234 | MS.gene69823 | 0.803528 | 3.34E-49 | -1.69E-46 |
MS.gene051676 | MS.gene69823 | 0.808645 | 2.80E-50 | -1.69E-46 |
MS.gene051699 | MS.gene69823 | 0.856509 | 3.07E-62 | -1.69E-46 |
MS.gene051832 | MS.gene69823 | 0.809191 | 2.14E-50 | -1.69E-46 |
MS.gene052239 | MS.gene69823 | -0.828551 | 8.44E-55 | -1.69E-46 |
MS.gene052242 | MS.gene69823 | -0.808108 | 3.64E-50 | -1.69E-46 |
MS.gene052533 | MS.gene69823 | 0.831923 | 1.27E-55 | -1.69E-46 |
MS.gene052793 | MS.gene69823 | 0.816942 | 4.26E-52 | -1.69E-46 |
MS.gene054222 | MS.gene69823 | 0.858559 | 7.58E-63 | -1.69E-46 |
MS.gene054490 | MS.gene69823 | 0.804202 | 2.42E-49 | -1.69E-46 |
MS.gene055141 | MS.gene69823 | 0.820158 | 7.95E-53 | -1.69E-46 |
MS.gene055229 | MS.gene69823 | 0.812409 | 4.30E-51 | -1.69E-46 |
MS.gene055555 | MS.gene69823 | 0.810215 | 1.29E-50 | -1.69E-46 |
MS.gene056082 | MS.gene69823 | 0.800538 | 1.38E-48 | -1.69E-46 |
MS.gene056677 | MS.gene69823 | 0.84634 | 2.31E-59 | -1.69E-46 |
MS.gene057102 | MS.gene69823 | 0.871106 | 8.80E-67 | -1.69E-46 |
MS.gene058159 | MS.gene69823 | 0.818309 | 2.10E-52 | -1.69E-46 |
MS.gene058279 | MS.gene69823 | 0.818006 | 2.46E-52 | -1.69E-46 |
MS.gene058492 | MS.gene69823 | 0.8019 | 7.24E-49 | -1.69E-46 |
MS.gene059170 | MS.gene69823 | 0.805195 | 1.50E-49 | -1.69E-46 |
MS.gene059227 | MS.gene69823 | 0.811464 | 6.91E-51 | -1.69E-46 |
MS.gene059774 | MS.gene69823 | 0.803363 | 3.61E-49 | -1.69E-46 |
MS.gene05985 | MS.gene69823 | -0.862161 | 6.16E-64 | -1.69E-46 |
MS.gene060365 | MS.gene69823 | 0.840332 | 9.27E-58 | -1.69E-46 |
MS.gene060697 | MS.gene69823 | 0.800867 | 1.18E-48 | -1.69E-46 |
MS.gene061100 | MS.gene69823 | 0.825185 | 5.38E-54 | -1.69E-46 |
MS.gene061160 | MS.gene69823 | 0.821237 | 4.49E-53 | -1.69E-46 |
MS.gene061188 | MS.gene69823 | 0.810848 | 9.40E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene031556 | MS.gene69823 | PPI |
MS.gene69823 | MS.gene031553 | PPI |
MS.gene22482 | MS.gene69823 | PPI |
MS.gene061932 | MS.gene69823 | PPI |
MS.gene87295 | MS.gene69823 | PPI |
MS.gene96829 | MS.gene69823 | PPI |
MS.gene069825 | MS.gene69823 | PPI |
MS.gene69823 | MS.gene09785 | PPI |
MS.gene007486 | MS.gene69823 | PPI |
MS.gene69823 | MS.gene007485 | PPI |
MS.gene69823 | MS.gene006750 | PPI |
MS.gene007487 | MS.gene69823 | PPI |
MS.gene018518 | MS.gene69823 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69823.t1 | MTR_2g083220 | 98.194 | 443 | 8 | 0 | 1 | 443 | 1 | 443 | 0.0 | 905 |
MS.gene69823.t1 | MTR_4g081110 | 76.244 | 442 | 97 | 4 | 1 | 441 | 1 | 435 | 0.0 | 692 |
MS.gene69823.t1 | MTR_1g069705 | 53.515 | 441 | 175 | 3 | 1 | 441 | 12 | 422 | 4.04e-180 | 509 |
MS.gene69823.t1 | MTR_2g099185 | 52.147 | 163 | 77 | 1 | 170 | 332 | 355 | 516 | 6.32e-51 | 182 |
MS.gene69823.t1 | MTR_2g099185 | 38.889 | 90 | 54 | 1 | 30 | 118 | 37 | 126 | 1.80e-11 | 66.6 |
MS.gene69823.t1 | MTR_2g099185 | 50.000 | 166 | 82 | 1 | 170 | 335 | 360 | 524 | 1.91e-47 | 171 |
MS.gene69823.t1 | MTR_2g099185 | 38.947 | 95 | 57 | 1 | 25 | 118 | 37 | 131 | 2.34e-12 | 69.3 |
MS.gene69823.t1 | MTR_2g099185 | 50.000 | 166 | 82 | 1 | 170 | 335 | 355 | 519 | 2.93e-47 | 170 |
MS.gene69823.t1 | MTR_2g099185 | 38.889 | 90 | 54 | 1 | 30 | 118 | 37 | 126 | 2.27e-11 | 66.2 |
MS.gene69823.t1 | MTR_4g115090 | 41.096 | 146 | 82 | 2 | 185 | 328 | 431 | 574 | 1.31e-30 | 125 |
MS.gene69823.t1 | MTR_3g092100 | 32.751 | 229 | 124 | 3 | 204 | 432 | 338 | 536 | 1.07e-29 | 121 |
MS.gene69823.t1 | MTR_3g092100 | 37.748 | 151 | 73 | 6 | 24 | 171 | 61 | 193 | 6.77e-16 | 80.1 |
MS.gene69823.t1 | MTR_1g007590 | 30.837 | 227 | 127 | 5 | 206 | 432 | 290 | 486 | 2.93e-28 | 117 |
MS.gene69823.t1 | MTR_1g007590 | 30.837 | 227 | 127 | 5 | 206 | 432 | 385 | 581 | 6.82e-28 | 116 |
MS.gene69823.t1 | MTR_1g007590 | 49.367 | 79 | 38 | 1 | 36 | 112 | 68 | 146 | 6.91e-17 | 83.6 |
MS.gene69823.t1 | MTR_1g072400 | 54.386 | 57 | 26 | 0 | 200 | 256 | 47 | 103 | 4.91e-21 | 88.2 |
MS.gene69823.t1 | MTR_5g065510 | 50.000 | 72 | 35 | 1 | 31 | 101 | 21 | 92 | 2.71e-15 | 72.0 |
MS.gene69823.t1 | MTR_8g085300 | 26.190 | 294 | 177 | 11 | 55 | 326 | 107 | 382 | 5.88e-15 | 77.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69823.t1 | AT4G27100 | 72.851 | 442 | 111 | 3 | 1 | 442 | 1 | 433 | 0.0 | 648 |
MS.gene69823.t1 | AT4G27100 | 72.500 | 440 | 112 | 3 | 1 | 440 | 1 | 431 | 0.0 | 642 |
MS.gene69823.t1 | AT5G54780 | 70.998 | 431 | 113 | 3 | 1 | 430 | 1 | 420 | 0.0 | 614 |
MS.gene69823.t1 | AT2G20440 | 53.864 | 440 | 177 | 4 | 1 | 440 | 7 | 420 | 0.0 | 512 |
MS.gene69823.t1 | AT2G20440 | 53.864 | 440 | 177 | 4 | 1 | 440 | 7 | 420 | 0.0 | 512 |
MS.gene69823.t1 | AT4G28550 | 53.409 | 440 | 179 | 4 | 1 | 440 | 7 | 420 | 3.16e-178 | 505 |
MS.gene69823.t1 | AT2G20440 | 56.135 | 326 | 122 | 2 | 1 | 326 | 7 | 311 | 1.15e-139 | 404 |
MS.gene69823.t1 | AT4G28550 | 56.173 | 324 | 121 | 2 | 1 | 324 | 7 | 309 | 5.78e-139 | 402 |
MS.gene69823.t1 | AT4G28550 | 56.000 | 325 | 122 | 2 | 1 | 325 | 7 | 310 | 2.03e-138 | 400 |
MS.gene69823.t1 | AT2G20440 | 50.909 | 330 | 136 | 4 | 111 | 440 | 1 | 304 | 5.58e-122 | 357 |
MS.gene69823.t1 | AT3G59570 | 37.386 | 329 | 155 | 4 | 158 | 439 | 339 | 663 | 1.44e-58 | 204 |
MS.gene69823.t1 | AT3G59570 | 42.391 | 92 | 52 | 1 | 30 | 120 | 44 | 135 | 5.66e-15 | 77.8 |
MS.gene69823.t1 | AT2G43490 | 53.801 | 171 | 78 | 1 | 162 | 332 | 339 | 508 | 4.93e-55 | 195 |
MS.gene69823.t1 | AT2G43490 | 37.410 | 139 | 77 | 5 | 30 | 166 | 44 | 174 | 3.33e-16 | 81.6 |
MS.gene69823.t1 | AT2G43490 | 53.801 | 171 | 78 | 1 | 162 | 332 | 339 | 508 | 4.93e-55 | 195 |
MS.gene69823.t1 | AT2G43490 | 37.410 | 139 | 77 | 5 | 30 | 166 | 44 | 174 | 3.33e-16 | 81.6 |
MS.gene69823.t1 | AT2G43490 | 53.801 | 171 | 78 | 1 | 162 | 332 | 339 | 508 | 4.93e-55 | 195 |
MS.gene69823.t1 | AT2G43490 | 37.410 | 139 | 77 | 5 | 30 | 166 | 44 | 174 | 3.33e-16 | 81.6 |
MS.gene69823.t1 | AT2G43490 | 53.801 | 171 | 78 | 1 | 162 | 332 | 339 | 508 | 4.93e-55 | 195 |
MS.gene69823.t1 | AT2G43490 | 37.410 | 139 | 77 | 5 | 30 | 166 | 44 | 174 | 3.33e-16 | 81.6 |
MS.gene69823.t1 | AT2G43490 | 53.801 | 171 | 78 | 1 | 162 | 332 | 339 | 508 | 5.12e-55 | 195 |
MS.gene69823.t1 | AT2G43490 | 37.410 | 139 | 77 | 5 | 30 | 166 | 44 | 174 | 3.24e-16 | 81.6 |
MS.gene69823.t1 | AT2G43490 | 53.801 | 171 | 78 | 1 | 162 | 332 | 335 | 504 | 5.33e-55 | 195 |
MS.gene69823.t1 | AT2G43490 | 36.806 | 144 | 81 | 5 | 25 | 166 | 35 | 170 | 3.67e-17 | 84.7 |
MS.gene69823.t1 | AT2G43490 | 53.801 | 171 | 78 | 1 | 162 | 332 | 335 | 504 | 5.33e-55 | 195 |
MS.gene69823.t1 | AT2G43490 | 36.806 | 144 | 81 | 5 | 25 | 166 | 35 | 170 | 3.67e-17 | 84.7 |
MS.gene69823.t1 | AT2G43490 | 53.801 | 171 | 78 | 1 | 162 | 332 | 339 | 508 | 5.78e-55 | 194 |
MS.gene69823.t1 | AT2G43490 | 37.410 | 139 | 77 | 5 | 30 | 166 | 44 | 174 | 1.82e-16 | 82.4 |
MS.gene69823.t1 | AT3G59570 | 51.429 | 175 | 84 | 1 | 158 | 332 | 339 | 512 | 8.64e-52 | 185 |
MS.gene69823.t1 | AT3G59570 | 43.333 | 90 | 50 | 1 | 30 | 118 | 44 | 133 | 6.09e-15 | 77.8 |
MS.gene69823.t1 | AT3G59570 | 51.429 | 175 | 84 | 1 | 158 | 332 | 339 | 512 | 1.18e-51 | 186 |
MS.gene69823.t1 | AT3G59570 | 42.391 | 92 | 52 | 1 | 30 | 120 | 44 | 135 | 6.31e-15 | 77.8 |
MS.gene69823.t1 | AT5G52580 | 28.346 | 254 | 123 | 4 | 185 | 429 | 456 | 659 | 3.01e-29 | 121 |
MS.gene69823.t1 | AT5G41940 | 34.615 | 234 | 119 | 8 | 206 | 435 | 345 | 548 | 3.12e-29 | 120 |
MS.gene69823.t1 | AT5G41940 | 34.286 | 140 | 87 | 2 | 34 | 168 | 87 | 226 | 1.45e-16 | 82.4 |
MS.gene69823.t1 | AT5G52580 | 28.346 | 254 | 123 | 4 | 185 | 429 | 439 | 642 | 3.32e-29 | 120 |
MS.gene69823.t1 | AT5G52580 | 28.346 | 254 | 123 | 4 | 185 | 429 | 445 | 648 | 4.03e-29 | 120 |
MS.gene69823.t1 | AT5G53570 | 44.715 | 123 | 66 | 1 | 206 | 328 | 338 | 458 | 1.75e-28 | 118 |
MS.gene69823.t1 | AT5G53570 | 41.237 | 97 | 52 | 3 | 24 | 118 | 86 | 179 | 2.74e-12 | 68.9 |
MS.gene69823.t1 | AT5G53570 | 44.715 | 123 | 66 | 1 | 206 | 328 | 365 | 485 | 2.43e-28 | 118 |
MS.gene69823.t1 | AT5G53570 | 41.237 | 97 | 52 | 3 | 24 | 118 | 113 | 206 | 3.08e-12 | 68.9 |
MS.gene69823.t1 | AT5G24390 | 41.463 | 123 | 70 | 1 | 206 | 328 | 317 | 437 | 4.43e-27 | 114 |
MS.gene69823.t1 | AT3G49350 | 28.205 | 234 | 134 | 4 | 206 | 435 | 330 | 533 | 2.80e-26 | 111 |
MS.gene69823.t1 | AT1G04830 | 26.573 | 286 | 171 | 11 | 67 | 333 | 125 | 390 | 3.47e-16 | 80.9 |
MS.gene69823.t1 | AT1G04830 | 26.573 | 286 | 171 | 11 | 67 | 333 | 125 | 390 | 3.72e-16 | 80.9 |
Find 95 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTTGTCTGGATTTCTTTC+AGG | 0.106976 | 2.4:-16120285 | None:intergenic |
AAGAAAACTTGTCAAAATTA+TGG | 0.190885 | 2.4:+16120581 | MS.gene69823:CDS |
ATAAAATACCTATATGTTTA+TGG | 0.198183 | 2.4:-16121290 | None:intergenic |
TGTTTGGTGCTAGGCTTTCT+TGG | 0.220830 | 2.4:-16123368 | None:intergenic |
CCTATATGTTTATGGAGTTT+TGG | 0.239607 | 2.4:-16121282 | None:intergenic |
CGCCAATTGTTTCCTCTTGT+TGG | 0.248172 | 2.4:+16120192 | MS.gene69823:CDS |
AGGGAGTCCATCCATCAATT+AGG | 0.263963 | 2.4:+16119800 | MS.gene69823:intron |
GGAGGCTCAACTAAGTAATT+TGG | 0.270154 | 2.4:+16121236 | MS.gene69823:CDS |
CATCAATTAGGGGAGAAGTT+TGG | 0.292286 | 2.4:+16119812 | MS.gene69823:CDS |
ATCAATTAGGGGAGAAGTTT+GGG | 0.302400 | 2.4:+16119813 | MS.gene69823:CDS |
AAACACTAAGTCCAAGAAAA+TGG | 0.315609 | 2.4:+16119487 | MS.gene69823:CDS |
CAAACTTCTCCCCTAATTGA+TGG | 0.323763 | 2.4:-16119811 | None:intergenic |
CATCCAAGCCTCGCGCTTCA+TGG | 0.324462 | 2.4:-16122523 | None:intergenic |
GGGAGTCCATCCATCAATTA+GGG | 0.330099 | 2.4:+16119801 | MS.gene69823:intron |
ATGATGAAGCAGACGCATTT+TGG | 0.333770 | 2.4:+16121015 | MS.gene69823:CDS |
GATGTACTGGTCGCACTCTT+GGG | 0.336065 | 2.4:+16121211 | MS.gene69823:CDS |
AGATGTACTGGTCGCACTCT+TGG | 0.345747 | 2.4:+16121210 | MS.gene69823:CDS |
AGGAAATCTAGATGCCAAAA+AGG | 0.346102 | 2.4:+16122859 | MS.gene69823:CDS |
AAATTCACAAACCTATTTGA+TGG | 0.347183 | 2.4:-16120413 | None:intergenic |
ATGTTAACTCTCCATCAAAT+AGG | 0.350184 | 2.4:+16120402 | MS.gene69823:CDS |
TCATACATCAAGAACAAATA+AGG | 0.353993 | 2.4:-16122320 | None:intergenic |
CTTTCGTCAAATGTACTCTT+CGG | 0.363004 | 2.4:-16119859 | None:intergenic |
AGAAAACTTGTCAAAATTAT+GGG | 0.382772 | 2.4:+16120582 | MS.gene69823:CDS |
TACTTCCTCAAGATAATAAT+AGG | 0.382978 | 2.4:+16120316 | MS.gene69823:CDS |
TTTGTGATTCATTGTACCTA+TGG | 0.385679 | 2.4:+16121615 | MS.gene69823:CDS |
TTTACAGAATCTATACTTGA+AGG | 0.394310 | 2.4:-16120339 | None:intergenic |
CCAAAACTCCATAAACATAT+AGG | 0.406934 | 2.4:+16121282 | MS.gene69823:CDS |
ATAATCATGGGGTCTTGAAT+TGG | 0.410294 | 2.4:-16120261 | None:intergenic |
GCAACAAGGAAAACAGATAT+AGG | 0.410679 | 2.4:-16122467 | None:intergenic |
ATTTACTCAAGAAGGGTATC+TGG | 0.414638 | 2.4:+16119518 | MS.gene69823:CDS |
CATCTCAAGATTCAAGATCA+AGG | 0.418043 | 2.4:+16118481 | MS.gene69823:CDS |
GAGAGACAAAATATGAGAAA+TGG | 0.418641 | 2.4:+16122419 | MS.gene69823:CDS |
ATCATTACTGCAATCTGGTC+TGG | 0.419284 | 2.4:-16118453 | None:intergenic |
CATCAAGAAGAATTATCATT+GGG | 0.422403 | 2.4:-16120995 | None:intergenic |
CAAGAAGGGTATCTGGATAT+AGG | 0.425363 | 2.4:+16119525 | MS.gene69823:CDS |
CTTGTGATGTGGAGAGATCC+AGG | 0.427729 | 2.4:+16118404 | None:intergenic |
ATATTCTTGCAGTTTATGCT+TGG | 0.433846 | 2.4:+16120605 | MS.gene69823:CDS |
TTTCGTCAAATGTACTCTTC+GGG | 0.441710 | 2.4:-16119858 | None:intergenic |
CTTGATCTTGAATCTTGAGA+TGG | 0.445826 | 2.4:-16118480 | None:intergenic |
TCATCAAGAAGAATTATCAT+TGG | 0.451073 | 2.4:-16120996 | None:intergenic |
GCTTGGATAGATAAAGAAGT+TGG | 0.451389 | 2.4:+16120622 | MS.gene69823:CDS |
TTGACGTGGTACGCACTGAT+AGG | 0.451450 | 2.4:+16120536 | MS.gene69823:CDS |
TTGTGATTCATTGTACCTAT+GGG | 0.454384 | 2.4:+16121616 | MS.gene69823:CDS |
TTGTTTCCTCTTGTTGGAAG+TGG | 0.462346 | 2.4:+16120198 | MS.gene69823:CDS |
ATTTCTTTCAGGCATAATCA+TGG | 0.468298 | 2.4:-16120274 | None:intergenic |
AGTACAGCTAATCCCTTGTC+TGG | 0.469428 | 2.4:-16120297 | None:intergenic |
CGAGGAAATTTCAGATGTAC+TGG | 0.471593 | 2.4:+16121198 | MS.gene69823:CDS |
GGAACATCATTACTGCAATC+TGG | 0.472237 | 2.4:-16118458 | None:intergenic |
CATGATGCATTTACTCAAGA+AGG | 0.472341 | 2.4:+16119510 | MS.gene69823:CDS |
ACTCCATGAAGCGCGAGGCT+TGG | 0.472658 | 2.4:+16122520 | MS.gene69823:CDS |
AAAGAATCAGCTGAAACTCC+TGG | 0.480245 | 2.4:-16118422 | None:intergenic |
CAGATATTGAATGACACAAC+AGG | 0.486107 | 2.4:+16122839 | MS.gene69823:intron |
TGGTCGCACTCTTGGGGTGG+AGG | 0.488394 | 2.4:+16121218 | MS.gene69823:CDS |
GATGGAGAGTTAACATCCAC+TGG | 0.490352 | 2.4:-16120395 | None:intergenic |
TGGCCATCATCAGTAATTAC+AGG | 0.493011 | 2.4:-16120237 | None:intergenic |
TTCCAACAAGAGGAAACAAT+TGG | 0.498284 | 2.4:-16120194 | None:intergenic |
TTTCTTTCAGGCATAATCAT+GGG | 0.498518 | 2.4:-16120273 | None:intergenic |
TAGGTACAATGAATCACAAA+AGG | 0.507991 | 2.4:-16121612 | None:intergenic |
GTAAAAGCTGAGGGCGTCAA+AGG | 0.527510 | 2.4:+16122362 | MS.gene69823:CDS |
TCACCTGTAATTACTGATGA+TGG | 0.529934 | 2.4:+16120234 | MS.gene69823:CDS |
AGGAAAACAGATATAGGAAG+AGG | 0.540547 | 2.4:-16122461 | None:intergenic |
GAATTATCATTGGGGAGCAT+AGG | 0.542492 | 2.4:-16120986 | None:intergenic |
TTGATCTTGAATCTTGAGAT+GGG | 0.545349 | 2.4:-16118479 | None:intergenic |
ATCAAATAAGAGAACGCCGA+AGG | 0.555836 | 2.4:+16119884 | MS.gene69823:CDS |
TACTGGTCGCACTCTTGGGG+TGG | 0.558646 | 2.4:+16121215 | MS.gene69823:CDS |
GAAGGCCTATTATTATCTTG+AGG | 0.560973 | 2.4:-16120321 | None:intergenic |
TGGAGAACAGAACATATTGG+TGG | 0.562536 | 2.4:+16121533 | MS.gene69823:intron |
CTTCTCCCCTAATTGATGGA+TGG | 0.563411 | 2.4:-16119807 | None:intergenic |
TCAGGATGCAATATGCTACA+TGG | 0.565622 | 2.4:+16120157 | MS.gene69823:intron |
TCATGGGGTCTTGAATTGGT+TGG | 0.566507 | 2.4:-16120257 | None:intergenic |
TTCTTTCAGGCATAATCATG+GGG | 0.568000 | 2.4:-16120272 | None:intergenic |
ATGTACTGGTCGCACTCTTG+GGG | 0.573792 | 2.4:+16121212 | MS.gene69823:CDS |
AAAGAAGTTGGATACGGTCA+AGG | 0.579690 | 2.4:+16120634 | MS.gene69823:CDS |
TGATTCATTGTACCTATGGG+AGG | 0.581982 | 2.4:+16121619 | MS.gene69823:CDS |
ATCAGCTTCTGTAAAAGCTG+AGG | 0.587749 | 2.4:+16122352 | MS.gene69823:CDS |
CTTTCAACACACCAGCAACA+AGG | 0.588036 | 2.4:-16122481 | None:intergenic |
AATCGACCACTTCCAACAAG+AGG | 0.590144 | 2.4:-16120204 | None:intergenic |
ATAGATAAAGAAGTTGGATA+CGG | 0.592454 | 2.4:+16120628 | MS.gene69823:CDS |
AGGCTTGGATGATGTTGTCA+AGG | 0.604218 | 2.4:+16122535 | MS.gene69823:CDS |
TCAGCTTCTGTAAAAGCTGA+GGG | 0.607394 | 2.4:+16122353 | MS.gene69823:CDS |
CTCTGAGACGAATCTACCGA+GGG | 0.607571 | 2.4:+16119553 | MS.gene69823:CDS |
ATGATGCATTTACTCAAGAA+GGG | 0.608798 | 2.4:+16119511 | MS.gene69823:CDS |
CCTGAAAGAAATCCAGACAA+GGG | 0.614978 | 2.4:+16120285 | MS.gene69823:CDS |
AAGCCAGACACACCTCCCAT+AGG | 0.625296 | 2.4:-16121631 | None:intergenic |
GCCTGAAAGAAATCCAGACA+AGG | 0.626590 | 2.4:+16120284 | MS.gene69823:CDS |
AGAACAGAACATATTGGTGG+AGG | 0.627107 | 2.4:+16121536 | MS.gene69823:intron |
GGTACGCACTGATAGGACAT+TGG | 0.627837 | 2.4:+16120543 | MS.gene69823:CDS |
GCAAAGTCAATACGACAATG+TGG | 0.656189 | 2.4:+16122389 | MS.gene69823:CDS |
CAGACAAGAAACTAATCCAG+TGG | 0.668020 | 2.4:+16120379 | MS.gene69823:CDS |
ATCAAGAAGAATTATCATTG+GGG | 0.677023 | 2.4:-16120994 | None:intergenic |
ACTCTGAGACGAATCTACCG+AGG | 0.686204 | 2.4:+16119552 | MS.gene69823:CDS |
GGAGTCCATCCATCAATTAG+GGG | 0.691468 | 2.4:+16119802 | MS.gene69823:CDS |
AAACTACTCCATGAAGCGCG+AGG | 0.691668 | 2.4:+16122515 | MS.gene69823:CDS |
ATACGTTTCAGGTCTTGACG+TGG | 0.710991 | 2.4:+16120522 | MS.gene69823:intron |
TCTGAGACGAATCTACCGAG+GGG | 0.796528 | 2.4:+16119554 | MS.gene69823:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACTAAAGTTTTTTTTATAAA+TGG | + | chr2.4:16118797-16118816 | MS.gene69823:intron | 10.0% |
!!! | TTTTATTCAACAAATTTTAA+TGG | - | chr2.4:16121457-16121476 | None:intergenic | 10.0% |
!!! | TTTTTTTTATTCTAATAAGA+AGG | + | chr2.4:16120752-16120771 | MS.gene69823:intron | 10.0% |
!! | AATTTAACACATACATAAAA+AGG | - | chr2.4:16122780-16122799 | None:intergenic | 15.0% |
!! | ATAAAATACCTATATGTTTA+TGG | - | chr2.4:16121293-16121312 | None:intergenic | 15.0% |
!!! | AAAGTTTGATTTTTATTTCT+GGG | + | chr2.4:16118520-16118539 | MS.gene69823:intron | 15.0% |
!!! | AATTTACTGTCTTTTAATTT+TGG | + | chr2.4:16121513-16121532 | MS.gene69823:intron | 15.0% |
!!! | ATATCATAAACTGTTTTAAT+GGG | - | chr2.4:16122203-16122222 | None:intergenic | 15.0% |
!!! | ATTTACATTTTATTGAACAA+TGG | + | chr2.4:16121679-16121698 | MS.gene69823:intron | 15.0% |
!!! | GTTTTTGTTATAATTTTGTT+TGG | + | chr2.4:16118542-16118561 | MS.gene69823:intron | 15.0% |
!!! | TATATCATAAACTGTTTTAA+TGG | - | chr2.4:16122204-16122223 | None:intergenic | 15.0% |
!! | AAACAAAAAATGTTAACTAG+TGG | + | chr2.4:16123047-16123066 | MS.gene69823:intron | 20.0% |
!! | AAGAAAACTTGTCAAAATTA+TGG | + | chr2.4:16120581-16120600 | MS.gene69823:CDS | 20.0% |
!! | AATAAACCAAGTAAACAAAT+TGG | + | chr2.4:16120782-16120801 | MS.gene69823:intron | 20.0% |
!! | ACATTGAAACAATTATGAAA+TGG | - | chr2.4:16119920-16119939 | None:intergenic | 20.0% |
!! | AGAAAACTTGTCAAAATTAT+GGG | + | chr2.4:16120582-16120601 | MS.gene69823:CDS | 20.0% |
!! | ATAATCATCAATACTTTCAA+GGG | - | chr2.4:16119688-16119707 | None:intergenic | 20.0% |
!! | CAGAAATAAAAATCAAACTT+TGG | - | chr2.4:16118521-16118540 | None:intergenic | 20.0% |
!! | TAAAAGAGATAATAGAGATA+AGG | - | chr2.4:16121075-16121094 | None:intergenic | 20.0% |
!! | TCACAAAAAATATTTGAGAA+AGG | + | chr2.4:16122904-16122923 | MS.gene69823:CDS | 20.0% |
!! | TGTTAAAAAATTTCAAACCA+GGG | + | chr2.4:16119781-16119800 | MS.gene69823:intron | 20.0% |
!! | TTACCATGTGATTTATATTA+CGG | - | chr2.4:16120481-16120500 | None:intergenic | 20.0% |
!! | TTGTTAAAAAATTTCAAACC+AGG | + | chr2.4:16119780-16119799 | MS.gene69823:intron | 20.0% |
!! | TTTCCATTAATAATTTCTTC+AGG | - | chr2.4:16121413-16121432 | None:intergenic | 20.0% |
!!! | AAATTTTTAACAGATGATGT+GGG | + | chr2.4:16122283-16122302 | MS.gene69823:intron | 20.0% |
!!! | CAAAGTTTGATTTTTATTTC+TGG | + | chr2.4:16118519-16118538 | MS.gene69823:intron | 20.0% |
!!! | CAAGAATTTTTATGTTTATG+TGG | + | chr2.4:16119738-16119757 | MS.gene69823:intron | 20.0% |
!!! | TATCATAAACTGTTTTAATG+GGG | - | chr2.4:16122202-16122221 | None:intergenic | 20.0% |
!!! | TTAAAGATAGTGTCTTTTTT+TGG | + | chr2.4:16119157-16119176 | MS.gene69823:intron | 20.0% |
!!! | TTTTCTTAATTTTGGAAACT+CGG | + | chr2.4:16119397-16119416 | MS.gene69823:intron | 20.0% |
! | AAAAAAAACTACTACTTGCA+TGG | - | chr2.4:16120738-16120757 | None:intergenic | 25.0% |
! | AAAATGTTAACTAGTGGTTA+AGG | + | chr2.4:16123053-16123072 | MS.gene69823:intron | 25.0% |
! | AAATATGATTAAGATCAGAC+AGG | - | chr2.4:16119654-16119673 | None:intergenic | 25.0% |
! | AAATTCACAAACCTATTTGA+TGG | - | chr2.4:16120416-16120435 | None:intergenic | 25.0% |
! | AACGTATTATGTGCATAAAA+AGG | - | chr2.4:16120509-16120528 | None:intergenic | 25.0% |
! | AAGTATGTAATTCAAGTGTT+CGG | + | chr2.4:16121124-16121143 | MS.gene69823:intron | 25.0% |
! | AATAAACTTTAATTGCTTGC+AGG | + | chr2.4:16123345-16123364 | MS.gene69823:intron | 25.0% |
! | AATAGTCATAAGCAATAAGT+TGG | - | chr2.4:16123178-16123197 | None:intergenic | 25.0% |
! | ACCGTAGTACTATATATATA+TGG | - | chr2.4:16121947-16121966 | None:intergenic | 25.0% |
! | ACGTATTATGTGCATAAAAA+GGG | - | chr2.4:16120508-16120527 | None:intergenic | 25.0% |
! | AGACTTTGCAATAAATGTAT+TGG | - | chr2.4:16123007-16123026 | None:intergenic | 25.0% |
! | ATAGATAAAGAAGTTGGATA+CGG | + | chr2.4:16120628-16120647 | MS.gene69823:CDS | 25.0% |
! | ATCAAGAAGAATTATCATTG+GGG | - | chr2.4:16120997-16121016 | None:intergenic | 25.0% |
! | ATGCCTGAAGAAATTATTAA+TGG | + | chr2.4:16121407-16121426 | MS.gene69823:intron | 25.0% |
! | CATAATCATCAATACTTTCA+AGG | - | chr2.4:16119689-16119708 | None:intergenic | 25.0% |
! | CATCAAGAAGAATTATCATT+GGG | - | chr2.4:16120998-16121017 | None:intergenic | 25.0% |
! | CTAACACTATCTCATTAATT+CGG | - | chr2.4:16121764-16121783 | None:intergenic | 25.0% |
! | GATAACATTGTGTGTTAAAT+GGG | + | chr2.4:16119051-16119070 | MS.gene69823:intron | 25.0% |
! | GCCATATATATATAGTACTA+CGG | + | chr2.4:16121943-16121962 | MS.gene69823:intron | 25.0% |
! | TACTTCCTCAAGATAATAAT+AGG | + | chr2.4:16120316-16120335 | MS.gene69823:CDS | 25.0% |
! | TCATACATCAAGAACAAATA+AGG | - | chr2.4:16122323-16122342 | None:intergenic | 25.0% |
! | TCATCAAGAAGAATTATCAT+TGG | - | chr2.4:16120999-16121018 | None:intergenic | 25.0% |
! | TGATAACATTGTGTGTTAAA+TGG | + | chr2.4:16119050-16119069 | MS.gene69823:intron | 25.0% |
! | TTAACACACAATGTTATCAA+CGG | - | chr2.4:16119049-16119068 | None:intergenic | 25.0% |
! | TTTACAGAATCTATACTTGA+AGG | - | chr2.4:16120342-16120361 | None:intergenic | 25.0% |
! | TTTATTGCAAAGTCTTAGAT+TGG | + | chr2.4:16123012-16123031 | MS.gene69823:intron | 25.0% |
! | TTTCTTCAACATAACAAAAG+AGG | - | chr2.4:16121482-16121501 | None:intergenic | 25.0% |
!! | AAACTTTTGTTCATTTTGAG+GGG | + | chr2.4:16118869-16118888 | MS.gene69823:intron | 25.0% |
!! | ACTTCTTGATTGTTATTACA+TGG | + | chr2.4:16119452-16119471 | MS.gene69823:intron | 25.0% |
!! | ACTTTTATGTTTATGTCATC+AGG | + | chr2.4:16120139-16120158 | MS.gene69823:intron | 25.0% |
!! | AGAAACTTTTGTTCATTTTG+AGG | + | chr2.4:16118867-16118886 | MS.gene69823:intron | 25.0% |
!! | AGTTCAAGTAATGATCTTTT+AGG | - | chr2.4:16120117-16120136 | None:intergenic | 25.0% |
!! | ATGCAAATGATTTTGTGTTA+AGG | - | chr2.4:16119315-16119334 | None:intergenic | 25.0% |
!! | GAAACTTTTGTTCATTTTGA+GGG | + | chr2.4:16118868-16118887 | MS.gene69823:intron | 25.0% |
!! | GAAATTTTTAACAGATGATG+TGG | + | chr2.4:16122282-16122301 | MS.gene69823:intron | 25.0% |
!! | TTGAATTTGATGACAAGTAT+TGG | + | chr2.4:16118925-16118944 | MS.gene69823:intron | 25.0% |
!! | TTGTTTCCAATTTGTTTACT+TGG | - | chr2.4:16120791-16120810 | None:intergenic | 25.0% |
!!! | ATCATAAACTGTTTTAATGG+GGG | - | chr2.4:16122201-16122220 | None:intergenic | 25.0% |
!!! | CAATGTTTTAAAAACTCAAC+CGG | + | chr2.4:16119934-16119953 | MS.gene69823:intron | 25.0% |
!!! | CTTGAAAGTATTGATGATTA+TGG | + | chr2.4:16119687-16119706 | MS.gene69823:intron | 25.0% |
!!! | CTTTTGTTATGTTGAAGAAA+TGG | + | chr2.4:16121482-16121501 | MS.gene69823:intron | 25.0% |
AAACACTAAGTCCAAGAAAA+TGG | + | chr2.4:16119487-16119506 | MS.gene69823:CDS | 30.0% | |
ATATTCTTGCAGTTTATGCT+TGG | + | chr2.4:16120605-16120624 | MS.gene69823:CDS | 30.0% | |
ATGATGCATTTACTCAAGAA+GGG | + | chr2.4:16119511-16119530 | MS.gene69823:CDS | 30.0% | |
ATGTTAACTCTCCATCAAAT+AGG | + | chr2.4:16120402-16120421 | MS.gene69823:CDS | 30.0% | |
ATTTCTTTCAGGCATAATCA+TGG | - | chr2.4:16120277-16120296 | None:intergenic | 30.0% | |
CATATATAGACACATAAGAG+AGG | - | chr2.4:16122091-16122110 | None:intergenic | 30.0% | |
CCAAAACTCCATAAACATAT+AGG | + | chr2.4:16121282-16121301 | MS.gene69823:CDS | 30.0% | |
GAAGTGTATTATTGGATTGA+TGG | + | chr2.4:16118590-16118609 | MS.gene69823:intron | 30.0% | |
GAGAGACAAAATATGAGAAA+TGG | + | chr2.4:16122419-16122438 | MS.gene69823:CDS | 30.0% | |
GTAAAACTATCTGTTGAGTA+TGG | - | chr2.4:16122116-16122135 | None:intergenic | 30.0% | |
TAGGTACAATGAATCACAAA+AGG | - | chr2.4:16121615-16121634 | None:intergenic | 30.0% | |
TAGTACATAACAATGAAGCA+CGG | - | chr2.4:16118738-16118757 | None:intergenic | 30.0% | |
TATAAACTGTTGTTGGGTAT+AGG | + | chr2.4:16118568-16118587 | MS.gene69823:intron | 30.0% | |
TCACCGTAATATAAATCACA+TGG | + | chr2.4:16120475-16120494 | MS.gene69823:intron | 30.0% | |
TGGTGATATAAACTGTTGTT+GGG | + | chr2.4:16118562-16118581 | MS.gene69823:intron | 30.0% | |
TTATGCACATAATACGTTTC+AGG | + | chr2.4:16120511-16120530 | MS.gene69823:intron | 30.0% | |
TTCTCGATATATCAATCTAG+TGG | - | chr2.4:16120829-16120848 | None:intergenic | 30.0% | |
TTGATCTTGAATCTTGAGAT+GGG | - | chr2.4:16118482-16118501 | None:intergenic | 30.0% | |
TTGTGATTCATTGTACCTAT+GGG | + | chr2.4:16121616-16121635 | MS.gene69823:CDS | 30.0% | |
TTTCTTTCAGGCATAATCAT+GGG | - | chr2.4:16120276-16120295 | None:intergenic | 30.0% | |
TTTGTGATTCATTGTACCTA+TGG | + | chr2.4:16121615-16121634 | MS.gene69823:CDS | 30.0% | |
! | AAGCAATAAGTTGGCAAAAA+TGG | - | chr2.4:16123169-16123188 | None:intergenic | 30.0% |
! | AAGTTTTACATCGTACCATA+TGG | - | chr2.4:16123297-16123316 | None:intergenic | 30.0% |
! | CCTATATGTTTATGGAGTTT+TGG | - | chr2.4:16121285-16121304 | None:intergenic | 30.0% |
! | CGAATTTTCTAACTCGATTT+GGG | + | chr2.4:16121351-16121370 | MS.gene69823:intron | 30.0% |
! | GAAGTTTGGGAATTTTTACT+TGG | + | chr2.4:16119826-16119845 | MS.gene69823:CDS | 30.0% |
! | TCGAATTTTCTAACTCGATT+TGG | + | chr2.4:16121350-16121369 | MS.gene69823:intron | 30.0% |
! | TGAAATTGATGTTCCCTTTT+TGG | + | chr2.4:16122635-16122654 | MS.gene69823:intron | 30.0% |
! | TTAGGTCTAGAATTCAGAAA+TGG | - | chr2.4:16120099-16120118 | None:intergenic | 30.0% |
! | TTGGTGATATAAACTGTTGT+TGG | + | chr2.4:16118561-16118580 | MS.gene69823:intron | 30.0% |
! | TTTCAGATAGTTGATATGTG+AGG | + | chr2.4:16118902-16118921 | MS.gene69823:intron | 30.0% |
!! | ACATAGCTTGTTAACCAAAA+AGG | - | chr2.4:16122652-16122671 | None:intergenic | 30.0% |
!! | AGTACTGATCTATTTCAAAG+AGG | - | chr2.4:16120670-16120689 | None:intergenic | 30.0% |
!! | CATAGCTTGTTAACCAAAAA+GGG | - | chr2.4:16122651-16122670 | None:intergenic | 30.0% |
!! | GTGACTATGTATTTGCTTTT+CGG | + | chr2.4:16121558-16121577 | MS.gene69823:CDS | 30.0% |
!! | TTTTGGAGAACAGAACATAT+TGG | + | chr2.4:16121530-16121549 | MS.gene69823:intron | 30.0% |
AACAATTCACGATTCTGAAC+AGG | + | chr2.4:16120954-16120973 | MS.gene69823:intron | 35.0% | |
AAGCTTAGAGACATTGCAAA+TGG | - | chr2.4:16120926-16120945 | None:intergenic | 35.0% | |
AAGTTGGCAAAAATGGCATA+TGG | - | chr2.4:16123162-16123181 | None:intergenic | 35.0% | |
AGAACGCAAATTGCAAACAA+TGG | + | chr2.4:16121812-16121831 | MS.gene69823:intron | 35.0% | |
AGGAAAACAGATATAGGAAG+AGG | - | chr2.4:16122464-16122483 | None:intergenic | 35.0% | |
AGGAAATCTAGATGCCAAAA+AGG | + | chr2.4:16122859-16122878 | MS.gene69823:CDS | 35.0% | |
ATAATCATGGGGTCTTGAAT+TGG | - | chr2.4:16120264-16120283 | None:intergenic | 35.0% | |
ATACAGATCTATGTGACGAA+TGG | - | chr2.4:16123102-16123121 | None:intergenic | 35.0% | |
ATATAAGAGCAAATACCCCT+CGG | - | chr2.4:16119572-16119591 | None:intergenic | 35.0% | |
ATATCTGAATCCTAGCTTGA+TGG | + | chr2.4:16119624-16119643 | MS.gene69823:intron | 35.0% | |
ATCAATTAGGGGAGAAGTTT+GGG | + | chr2.4:16119813-16119832 | MS.gene69823:CDS | 35.0% | |
ATCACATGTATCAACGTAGT+TGG | - | chr2.4:16120711-16120730 | None:intergenic | 35.0% | |
CAACTATTCGGTTATTTGAG+TGG | - | chr2.4:16120027-16120046 | None:intergenic | 35.0% | |
CAGATATTGAATGACACAAC+AGG | + | chr2.4:16122839-16122858 | MS.gene69823:intron | 35.0% | |
CATCTCAAGATTCAAGATCA+AGG | + | chr2.4:16118481-16118500 | MS.gene69823:CDS | 35.0% | |
CATGATGCATTTACTCAAGA+AGG | + | chr2.4:16119510-16119529 | MS.gene69823:CDS | 35.0% | |
CTAGACTTTCAATCTCACAA+TGG | + | chr2.4:16119358-16119377 | MS.gene69823:intron | 35.0% | |
CTTGATCTTGAATCTTGAGA+TGG | - | chr2.4:16118483-16118502 | None:intergenic | 35.0% | |
CTTTCGTCAAATGTACTCTT+CGG | - | chr2.4:16119862-16119881 | None:intergenic | 35.0% | |
CTTTGCTAAGTTGTCAGTAA+TGG | + | chr2.4:16119082-16119101 | MS.gene69823:intron | 35.0% | |
GAAGGCCTATTATTATCTTG+AGG | - | chr2.4:16120324-16120343 | None:intergenic | 35.0% | |
GAGAATACGAAGATTGTACA+AGG | - | chr2.4:16122952-16122971 | None:intergenic | 35.0% | |
GCAACAAGGAAAACAGATAT+AGG | - | chr2.4:16122470-16122489 | None:intergenic | 35.0% | |
GCTTGGATAGATAAAGAAGT+TGG | + | chr2.4:16120622-16120641 | MS.gene69823:CDS | 35.0% | |
GTTTAACTGGTTGAACTGTA+TGG | + | chr2.4:16120063-16120082 | MS.gene69823:intron | 35.0% | |
TCACCTGTAATTACTGATGA+TGG | + | chr2.4:16120234-16120253 | MS.gene69823:CDS | 35.0% | |
TTCCAACAAGAGGAAACAAT+TGG | - | chr2.4:16120197-16120216 | None:intergenic | 35.0% | |
TTCTTTCAGGCATAATCATG+GGG | - | chr2.4:16120275-16120294 | None:intergenic | 35.0% | |
TTGCAAGGTTGCAAGAAAAA+TGG | - | chr2.4:16120880-16120899 | None:intergenic | 35.0% | |
TTTCGTCAAATGTACTCTTC+GGG | - | chr2.4:16119861-16119880 | None:intergenic | 35.0% | |
TTTCTCAGTAGTTAGCCATA+TGG | + | chr2.4:16123279-16123298 | MS.gene69823:intron | 35.0% | |
! | ATATCTGTTTTCCTTGTTGC+TGG | + | chr2.4:16122470-16122489 | MS.gene69823:CDS | 35.0% |
! | ATGTTGTCAAGGTTAGTCAT+GGG | + | chr2.4:16122546-16122565 | MS.gene69823:intron | 35.0% |
! | CTTGTGCACTATTTTGTAGT+AGG | + | chr2.4:16120441-16120460 | MS.gene69823:intron | 35.0% |
! | GGGTATAGGAAGTGTATTAT+TGG | + | chr2.4:16118582-16118601 | MS.gene69823:intron | 35.0% |
! | GTATCCATCATGGTGTTTTA+TGG | + | chr2.4:16118998-16119017 | MS.gene69823:intron | 35.0% |
! | GTCTAGAATTCAGAAATGGT+GGG | - | chr2.4:16120095-16120114 | None:intergenic | 35.0% |
! | TGATTGTTATTACATGGCTC+AGG | + | chr2.4:16119458-16119477 | MS.gene69823:intron | 35.0% |
!! | ATTGTGTGTTAAATGGGTTG+TGG | + | chr2.4:16119057-16119076 | MS.gene69823:intron | 35.0% |
!! | ATTTACTCAAGAAGGGTATC+TGG | + | chr2.4:16119518-16119537 | MS.gene69823:CDS | 35.0% |
!! | ATTTGCTTTTCGGATGCTTA+TGG | + | chr2.4:16121568-16121587 | MS.gene69823:CDS | 35.0% |
!! | GAGCTTGTTAAGTTGATAAC+AGG | + | chr2.4:16118843-16118862 | MS.gene69823:intron | 35.0% |
!!! | AATGCATCATGCCATTTTCT+TGG | - | chr2.4:16119501-16119520 | None:intergenic | 35.0% |
!!! | ATTTTCTAACTCGATTTGGG+TGG | + | chr2.4:16121354-16121373 | MS.gene69823:intron | 35.0% |
!!! | GGATTTTTTGACAATCTCCA+TGG | + | chr2.4:16118955-16118974 | MS.gene69823:intron | 35.0% |
!!! | GTTGTCAGTAATGGTTTTGT+TGG | + | chr2.4:16119091-16119110 | MS.gene69823:intron | 35.0% |
AAAGAAGTTGGATACGGTCA+AGG | + | chr2.4:16120634-16120653 | MS.gene69823:CDS | 40.0% | |
AAAGAATCAGCTGAAACTCC+TGG | - | chr2.4:16118425-16118444 | None:intergenic | 40.0% | |
AAATGGAAGCTGACTACCTT+CGG | - | chr2.4:16119903-16119922 | None:intergenic | 40.0% | |
AACCGAATAGTTGACAGCAT+CGG | + | chr2.4:16120034-16120053 | MS.gene69823:intron | 40.0% | |
AACCGATGCTGTCAACTATT+CGG | - | chr2.4:16120039-16120058 | None:intergenic | 40.0% | |
AATAACACGCAAGATGTCAG+AGG | - | chr2.4:16122814-16122833 | None:intergenic | 40.0% | |
ACACACAATGTTATCAACGG+AGG | - | chr2.4:16119046-16119065 | None:intergenic | 40.0% | |
ACTGGTTGAACTGTATGGTT+CGG | + | chr2.4:16120068-16120087 | MS.gene69823:intron | 40.0% | |
AGAACAGAACATATTGGTGG+AGG | + | chr2.4:16121536-16121555 | MS.gene69823:intron | 40.0% | |
ATAGACACATAAGAGAGGCA+AGG | - | chr2.4:16122086-16122105 | None:intergenic | 40.0% | |
ATCAAATAAGAGAACGCCGA+AGG | + | chr2.4:16119884-16119903 | MS.gene69823:CDS | 40.0% | |
ATCAACACTGCACACCTAAA+AGG | - | chr2.4:16118681-16118700 | None:intergenic | 40.0% | |
ATCAGCTTCTGTAAAAGCTG+AGG | + | chr2.4:16122352-16122371 | MS.gene69823:CDS | 40.0% | |
ATCATTACTGCAATCTGGTC+TGG | - | chr2.4:16118456-16118475 | None:intergenic | 40.0% | |
CAAACTTCTCCCCTAATTGA+TGG | - | chr2.4:16119814-16119833 | None:intergenic | 40.0% | |
CAGACAAGAAACTAATCCAG+TGG | + | chr2.4:16120379-16120398 | MS.gene69823:CDS | 40.0% | |
CATAGTTCAACCACTCAAAC+CGG | + | chr2.4:16119983-16120002 | MS.gene69823:intron | 40.0% | |
CATCAATTAGGGGAGAAGTT+TGG | + | chr2.4:16119812-16119831 | MS.gene69823:CDS | 40.0% | |
CCTAAAAGGCTTTCAATCAG+AGG | - | chr2.4:16118667-16118686 | None:intergenic | 40.0% | |
CCTGAAAGAAATCCAGACAA+GGG | + | chr2.4:16120285-16120304 | MS.gene69823:CDS | 40.0% | |
CGAGGAAATTTCAGATGTAC+TGG | + | chr2.4:16121198-16121217 | MS.gene69823:CDS | 40.0% | |
GAGACATTGCAAATGGTGTT+TGG | - | chr2.4:16120919-16120938 | None:intergenic | 40.0% | |
GATAGTGTTAGAACACCAAC+TGG | + | chr2.4:16121773-16121792 | MS.gene69823:intron | 40.0% | |
GATCGTTTGCTTACACAGTT+CGG | + | chr2.4:16121840-16121859 | MS.gene69823:intron | 40.0% | |
GATTGTCAAAAAATCCGCCA+TGG | - | chr2.4:16118951-16118970 | None:intergenic | 40.0% | |
GGAACATCATTACTGCAATC+TGG | - | chr2.4:16118461-16118480 | None:intergenic | 40.0% | |
GGAGGCTCAACTAAGTAATT+TGG | + | chr2.4:16121236-16121255 | MS.gene69823:CDS | 40.0% | |
GTTTGACTGTTGTTCTGTTC+CGG | - | chr2.4:16120005-16120024 | None:intergenic | 40.0% | |
TAGACACATAAGAGAGGCAA+GGG | - | chr2.4:16122085-16122104 | None:intergenic | 40.0% | |
TAGCTGTTCTATAGTCGTAG+AGG | - | chr2.4:16121879-16121898 | None:intergenic | 40.0% | |
TCAGCTTCTGTAAAAGCTGA+GGG | + | chr2.4:16122353-16122372 | MS.gene69823:CDS | 40.0% | |
TCAGGATGCAATATGCTACA+TGG | + | chr2.4:16120157-16120176 | MS.gene69823:intron | 40.0% | |
TCCACCATAAAACACCATGA+TGG | - | chr2.4:16119005-16119024 | None:intergenic | 40.0% | |
TGATTCATTGTACCTATGGG+AGG | + | chr2.4:16121619-16121638 | MS.gene69823:CDS | 40.0% | |
TGCAACCTTGCAACAAACAA+TGG | + | chr2.4:16120887-16120906 | MS.gene69823:intron | 40.0% | |
TGGAGAACAGAACATATTGG+TGG | + | chr2.4:16121533-16121552 | MS.gene69823:intron | 40.0% | |
TGGCCATCATCAGTAATTAC+AGG | - | chr2.4:16120240-16120259 | None:intergenic | 40.0% | |
TTGTTTCCTCTTGTTGGAAG+TGG | + | chr2.4:16120198-16120217 | MS.gene69823:CDS | 40.0% | |
! | ACTTGCCATTGTTTGTTGCA+AGG | - | chr2.4:16120895-16120914 | None:intergenic | 40.0% |
! | ATGATGAAGCAGACGCATTT+TGG | + | chr2.4:16121015-16121034 | MS.gene69823:CDS | 40.0% |
! | CCTCTGATTGAAAGCCTTTT+AGG | + | chr2.4:16118664-16118683 | MS.gene69823:intron | 40.0% |
! | GAATTATCATTGGGGAGCAT+AGG | - | chr2.4:16120989-16121008 | None:intergenic | 40.0% |
! | GATGTTGTCAAGGTTAGTCA+TGG | + | chr2.4:16122545-16122564 | MS.gene69823:intron | 40.0% |
! | GGTCTAGAATTCAGAAATGG+TGG | - | chr2.4:16120096-16120115 | None:intergenic | 40.0% |
! | TCCATCATGGTGTTTTATGG+TGG | + | chr2.4:16119001-16119020 | MS.gene69823:intron | 40.0% |
! | TTTCATTTTCCGCTACCAGT+TGG | - | chr2.4:16121791-16121810 | None:intergenic | 40.0% |
!! | CAAGAAGGGTATCTGGATAT+AGG | + | chr2.4:16119525-16119544 | MS.gene69823:CDS | 40.0% |
!! | GTTCTTGAACTTTTCAAGCG+AGG | + | chr2.4:16121180-16121199 | MS.gene69823:intron | 40.0% |
!! | TTGATGACAAGTATTGGCCA+TGG | + | chr2.4:16118931-16118950 | MS.gene69823:intron | 40.0% |
AAGTTGGATACGGTCAAGGT+GGG | + | chr2.4:16120638-16120657 | MS.gene69823:intron | 45.0% | |
AATCGACCACTTCCAACAAG+AGG | - | chr2.4:16120207-16120226 | None:intergenic | 45.0% | |
ACGGACACAAACATGAACAC+CGG | - | chr2.4:16118719-16118738 | None:intergenic | 45.0% | |
AGACACATAAGAGAGGCAAG+GGG | - | chr2.4:16122084-16122103 | None:intergenic | 45.0% | |
AGGCTTGGATGATGTTGTCA+AGG | + | chr2.4:16122535-16122554 | MS.gene69823:CDS | 45.0% | |
AGGGAGTCCATCCATCAATT+AGG | + | chr2.4:16119800-16119819 | MS.gene69823:intron | 45.0% | |
AGTACAGCTAATCCCTTGTC+TGG | - | chr2.4:16120300-16120319 | None:intergenic | 45.0% | |
ATGTTATCAACGGAGGATCG+CGG | - | chr2.4:16119039-16119058 | None:intergenic | 45.0% | |
CATCCTTCACAAATTGGCCA+TGG | - | chr2.4:16118975-16118994 | None:intergenic | 45.0% | |
CATGGCCAATTTGTGAAGGA+TGG | + | chr2.4:16118973-16118992 | MS.gene69823:intron | 45.0% | |
CATTGAACTGACAAGACCTG+TGG | + | chr2.4:16119958-16119977 | MS.gene69823:intron | 45.0% | |
CCCTTGTCTGGATTTCTTTC+AGG | - | chr2.4:16120288-16120307 | None:intergenic | 45.0% | |
CGCCAATTGTTTCCTCTTGT+TGG | + | chr2.4:16120192-16120211 | MS.gene69823:CDS | 45.0% | |
CTTCTCCCCTAATTGATGGA+TGG | - | chr2.4:16119810-16119829 | None:intergenic | 45.0% | |
CTTTCAACACACCAGCAACA+AGG | - | chr2.4:16122484-16122503 | None:intergenic | 45.0% | |
GATGGAGAGTTAACATCCAC+TGG | - | chr2.4:16120398-16120417 | None:intergenic | 45.0% | |
GCCTGAAAGAAATCCAGACA+AGG | + | chr2.4:16120284-16120303 | MS.gene69823:CDS | 45.0% | |
GGAGTCCATCCATCAATTAG+GGG | + | chr2.4:16119802-16119821 | MS.gene69823:CDS | 45.0% | |
GGGAGTCCATCCATCAATTA+GGG | + | chr2.4:16119801-16119820 | MS.gene69823:intron | 45.0% | |
GTTAGAACACCAACTGGTAG+CGG | + | chr2.4:16121779-16121798 | MS.gene69823:intron | 45.0% | |
TACCGCCATCCTTCACAAAT+TGG | - | chr2.4:16118981-16119000 | None:intergenic | 45.0% | |
TCATGGGGTCTTGAATTGGT+TGG | - | chr2.4:16120260-16120279 | None:intergenic | 45.0% | |
TCTCCATGGCCAATTTGTGA+AGG | + | chr2.4:16118969-16118988 | MS.gene69823:intron | 45.0% | |
TCTTAGGCCTGACTGTTTGT+CGG | - | chr2.4:16122022-16122041 | None:intergenic | 45.0% | |
TGATGTGTATGTGTCGTGTC+CGG | + | chr2.4:16118697-16118716 | MS.gene69823:intron | 45.0% | |
TGTTATTACATGGCTCAGGC+TGG | + | chr2.4:16119462-16119481 | MS.gene69823:intron | 45.0% | |
! | ATACGTTTCAGGTCTTGACG+TGG | + | chr2.4:16120522-16120541 | MS.gene69823:intron | 45.0% |
! | GACAGGTTTTCCATCAAGCT+AGG | - | chr2.4:16119637-16119656 | None:intergenic | 45.0% |
! | GGTCTTGTCAGTTCAATGTC+CGG | - | chr2.4:16119956-16119975 | None:intergenic | 45.0% |
! | GTCGTAGAGGTATGCACAAT+CGG | - | chr2.4:16121866-16121885 | None:intergenic | 45.0% |
! | TAATTGATGGATGGACTCCC+TGG | - | chr2.4:16119801-16119820 | None:intergenic | 45.0% |
! | TTGTCAAGGTTAGTCATGGG+AGG | + | chr2.4:16122549-16122568 | MS.gene69823:intron | 45.0% |
! | TTGTTCTGTTCCGGTTTGAG+TGG | - | chr2.4:16119996-16120015 | None:intergenic | 45.0% |
!! | ATGACAAGTATTGGCCATGG+CGG | + | chr2.4:16118934-16118953 | MS.gene69823:intron | 45.0% |
!! | TAGTTGACAGCATCGGTTCA+CGG | + | chr2.4:16120041-16120060 | MS.gene69823:intron | 45.0% |
!! | TGGCGATGCTACTTTGTTGA+GGG | + | chr2.4:16119111-16119130 | MS.gene69823:intron | 45.0% |
!! | TTGGCGATGCTACTTTGTTG+AGG | + | chr2.4:16119110-16119129 | MS.gene69823:intron | 45.0% |
!!! | TTTTTTATTTTTCTTAATTT+TGG | + | chr2.4:16119389-16119408 | MS.gene69823:intron | 5.0% |
AAACTACTCCATGAAGCGCG+AGG | + | chr2.4:16122515-16122534 | MS.gene69823:CDS | 50.0% | |
CACGCAAGATGTCAGAGGAA+CGG | - | chr2.4:16122809-16122828 | None:intergenic | 50.0% | |
CTTAGGCCTGACTGTTTGTC+GGG | - | chr2.4:16122021-16122040 | None:intergenic | 50.0% | |
GAAGTTGGATACGGTCAAGG+TGG | + | chr2.4:16120637-16120656 | MS.gene69823:intron | 50.0% | |
GGCCAATTTGTGAAGGATGG+CGG | + | chr2.4:16118976-16118995 | MS.gene69823:intron | 50.0% | |
GTGGTTGAACTATGAGCCAC+AGG | - | chr2.4:16119977-16119996 | None:intergenic | 50.0% | |
TGCCAAAAAGGCTTGCGTTG+AGG | + | chr2.4:16122871-16122890 | MS.gene69823:CDS | 50.0% | |
TTAGGCCTGACTGTTTGTCG+GGG | - | chr2.4:16122020-16122039 | None:intergenic | 50.0% | |
TTGCAGGCCAAGAAAGCCTA+GGG | + | chr2.4:16123361-16123380 | MS.gene69823:intron | 50.0% | |
! | AAGGATGGCGGTATCCATCA+TGG | + | chr2.4:16118988-16119007 | MS.gene69823:intron | 50.0% |
! | AGATGTACTGGTCGCACTCT+TGG | + | chr2.4:16121210-16121229 | MS.gene69823:CDS | 50.0% |
! | AGCCTCAACGCAAGCCTTTT+TGG | - | chr2.4:16122876-16122895 | None:intergenic | 50.0% |
! | ATGTACTGGTCGCACTCTTG+GGG | + | chr2.4:16121212-16121231 | MS.gene69823:CDS | 50.0% |
! | GATGTACTGGTCGCACTCTT+GGG | + | chr2.4:16121211-16121230 | MS.gene69823:CDS | 50.0% |
! | GGTACGCACTGATAGGACAT+TGG | + | chr2.4:16120543-16120562 | MS.gene69823:CDS | 50.0% |
! | TCTGAGACGAATCTACCGAG+GGG | + | chr2.4:16119554-16119573 | MS.gene69823:CDS | 50.0% |
! | TTGACGTGGTACGCACTGAT+AGG | + | chr2.4:16120536-16120555 | MS.gene69823:CDS | 50.0% |
!! | ACTCTGAGACGAATCTACCG+AGG | + | chr2.4:16119552-16119571 | MS.gene69823:CDS | 50.0% |
!! | CTCTGAGACGAATCTACCGA+GGG | + | chr2.4:16119553-16119572 | MS.gene69823:CDS | 50.0% |
!! | GCATCGGTTCACGGTTTAAC+TGG | + | chr2.4:16120050-16120069 | MS.gene69823:intron | 50.0% |
!! | GTAAAAGCTGAGGGCGTCAA+AGG | + | chr2.4:16122362-16122381 | MS.gene69823:CDS | 50.0% |
AAGCCAGACACACCTCCCAT+AGG | - | chr2.4:16121634-16121653 | None:intergenic | 55.0% | |
AATACCCCTGAACCGTACCG+CGG | + | chr2.4:16121979-16121998 | MS.gene69823:intron | 55.0% | |
ACATAAGAGAGGCAAGGGGC+GGG | - | chr2.4:16122080-16122099 | None:intergenic | 55.0% | |
CACATAAGAGAGGCAAGGGG+CGG | - | chr2.4:16122081-16122100 | None:intergenic | 55.0% | |
CAGTCAGGCCTAAGACACCA+AGG | + | chr2.4:16122027-16122046 | MS.gene69823:intron | 55.0% | |
CTTGCAGGCCAAGAAAGCCT+AGG | + | chr2.4:16123360-16123379 | MS.gene69823:intron | 55.0% | |
TAGGCCTGACTGTTTGTCGG+GGG | - | chr2.4:16122019-16122038 | None:intergenic | 55.0% | |
TGAGCTAGCAAAGCTCCCTC+CGG | - | chr2.4:16122053-16122072 | None:intergenic | 55.0% | |
! | GTACCTATGGGAGGTGTGTC+TGG | + | chr2.4:16121628-16121647 | MS.gene69823:intron | 55.0% |
ACTCCATGAAGCGCGAGGCT+TGG | + | chr2.4:16122520-16122539 | MS.gene69823:CDS | 60.0% | |
ATACCCCTGAACCGTACCGC+GGG | + | chr2.4:16121980-16121999 | MS.gene69823:intron | 60.0% | |
CAGGCCTAAGACACCAAGGC+CGG | + | chr2.4:16122031-16122050 | MS.gene69823:intron | 60.0% | |
CATAAGAGAGGCAAGGGGCG+GGG | - | chr2.4:16122079-16122098 | None:intergenic | 60.0% | |
CATCCAAGCCTCGCGCTTCA+TGG | - | chr2.4:16122526-16122545 | None:intergenic | 60.0% | |
CCTAAGACACCAAGGCCGGA+GGG | + | chr2.4:16122035-16122054 | MS.gene69823:intron | 60.0% | |
CCTGACTGTTTGTCGGGGGA+GGG | - | chr2.4:16122015-16122034 | None:intergenic | 60.0% | |
CTGACTGTTTGTCGGGGGAG+GGG | - | chr2.4:16122014-16122033 | None:intergenic | 60.0% | |
TACTGGTCGCACTCTTGGGG+TGG | + | chr2.4:16121215-16121234 | MS.gene69823:CDS | 60.0% | |
TGACTGTTTGTCGGGGGAGG+GGG | - | chr2.4:16122013-16122032 | None:intergenic | 60.0% | |
AGCAAAGCTCCCTCCGGCCT+TGG | - | chr2.4:16122047-16122066 | None:intergenic | 65.0% | |
ATCCCCCGCGGTACGGTTCA+GGG | - | chr2.4:16121987-16122006 | None:intergenic | 65.0% | |
CCCTCCCCCGACAAACAGTC+AGG | + | chr2.4:16122012-16122031 | MS.gene69823:intron | 65.0% | |
GACTGTTTGTCGGGGGAGGG+GGG | - | chr2.4:16122012-16122031 | None:intergenic | 65.0% | |
GCCTAAGACACCAAGGCCGG+AGG | + | chr2.4:16122034-16122053 | MS.gene69823:intron | 65.0% | |
GCCTGACTGTTTGTCGGGGG+AGG | - | chr2.4:16122016-16122035 | None:intergenic | 65.0% | |
TACCCCTGAACCGTACCGCG+GGG | + | chr2.4:16121981-16122000 | MS.gene69823:intron | 65.0% | |
TATCCCCCGCGGTACGGTTC+AGG | - | chr2.4:16121988-16122007 | None:intergenic | 65.0% | |
TGGTCGCACTCTTGGGGTGG+AGG | + | chr2.4:16121218-16121237 | MS.gene69823:CDS | 65.0% | |
!! | CCCTCCGGCCTTGGTGTCTT+AGG | - | chr2.4:16122038-16122057 | None:intergenic | 65.0% |
ACCCCTGAACCGTACCGCGG+GGG | + | chr2.4:16121982-16122001 | MS.gene69823:intron | 70.0% | |
GGGGGATATCCCCCGCGGTA+CGG | - | chr2.4:16121994-16122013 | None:intergenic | 70.0% | |
TCCCCCGCGGTACGGTTCAG+GGG | - | chr2.4:16121986-16122005 | None:intergenic | 70.0% | |
GGGAGGGGGGATATCCCCCG+CGG | - | chr2.4:16121999-16122018 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 16118410 | 16123381 | 16118410 | ID=MS.gene69823 |
chr2.4 | mRNA | 16118410 | 16123381 | 16118410 | ID=MS.gene69823.t1;Parent=MS.gene69823 |
chr2.4 | exon | 16118410 | 16118502 | 16118410 | ID=MS.gene69823.t1.exon1;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16118410 | 16118502 | 16118410 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
chr2.4 | exon | 16119480 | 16119575 | 16119480 | ID=MS.gene69823.t1.exon2;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16119480 | 16119575 | 16119480 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
chr2.4 | exon | 16119802 | 16119905 | 16119802 | ID=MS.gene69823.t1.exon3;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16119802 | 16119905 | 16119802 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
chr2.4 | exon | 16120161 | 16120423 | 16120161 | ID=MS.gene69823.t1.exon4;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16120161 | 16120423 | 16120161 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
chr2.4 | exon | 16120533 | 16120655 | 16120533 | ID=MS.gene69823.t1.exon5;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16120533 | 16120655 | 16120533 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
chr2.4 | exon | 16120976 | 16121064 | 16120976 | ID=MS.gene69823.t1.exon6;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16120976 | 16121064 | 16120976 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
chr2.4 | exon | 16121198 | 16121303 | 16121198 | ID=MS.gene69823.t1.exon7;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16121198 | 16121303 | 16121198 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
chr2.4 | exon | 16121543 | 16121640 | 16121543 | ID=MS.gene69823.t1.exon8;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16121543 | 16121640 | 16121543 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
chr2.4 | exon | 16122296 | 16122556 | 16122296 | ID=MS.gene69823.t1.exon9;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16122296 | 16122556 | 16122296 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
chr2.4 | exon | 16122842 | 16122925 | 16122842 | ID=MS.gene69823.t1.exon10;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16122842 | 16122925 | 16122842 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
chr2.4 | exon | 16123367 | 16123381 | 16123367 | ID=MS.gene69823.t1.exon11;Parent=MS.gene69823.t1 |
chr2.4 | CDS | 16123367 | 16123381 | 16123367 | ID=cds.MS.gene69823.t1;Parent=MS.gene69823.t1 |
Gene Sequence |
Protein sequence |