AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87295

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87295.t1 MTR_2g083220 98.194 443 8 0 1 443 1 443 0.0 905
MS.gene87295.t1 MTR_4g081110 76.244 442 97 4 1 441 1 435 0.0 692
MS.gene87295.t1 MTR_1g069705 53.515 441 175 3 1 441 12 422 4.04e-180 509
MS.gene87295.t1 MTR_2g099185 52.147 163 77 1 170 332 355 516 6.32e-51 182
MS.gene87295.t1 MTR_2g099185 38.889 90 54 1 30 118 37 126 1.80e-11 66.6
MS.gene87295.t1 MTR_2g099185 50.000 166 82 1 170 335 360 524 1.91e-47 171
MS.gene87295.t1 MTR_2g099185 38.947 95 57 1 25 118 37 131 2.34e-12 69.3
MS.gene87295.t1 MTR_2g099185 50.000 166 82 1 170 335 355 519 2.93e-47 170
MS.gene87295.t1 MTR_2g099185 38.889 90 54 1 30 118 37 126 2.27e-11 66.2
MS.gene87295.t1 MTR_4g115090 41.096 146 82 2 185 328 431 574 1.31e-30 125
MS.gene87295.t1 MTR_3g092100 32.751 229 124 3 204 432 338 536 1.07e-29 121
MS.gene87295.t1 MTR_3g092100 37.748 151 73 6 24 171 61 193 6.77e-16 80.1
MS.gene87295.t1 MTR_1g007590 30.837 227 127 5 206 432 290 486 2.93e-28 117
MS.gene87295.t1 MTR_1g007590 30.837 227 127 5 206 432 385 581 6.82e-28 116
MS.gene87295.t1 MTR_1g007590 49.367 79 38 1 36 112 68 146 6.91e-17 83.6
MS.gene87295.t1 MTR_1g072400 54.386 57 26 0 200 256 47 103 4.91e-21 88.2
MS.gene87295.t1 MTR_5g065510 50.000 72 35 1 31 101 21 92 2.71e-15 72.0
MS.gene87295.t1 MTR_8g085300 26.190 294 177 11 55 326 107 382 5.88e-15 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87295.t1 AT4G27100 72.851 442 111 3 1 442 1 433 0.0 648
MS.gene87295.t1 AT4G27100 72.500 440 112 3 1 440 1 431 0.0 642
MS.gene87295.t1 AT5G54780 70.998 431 113 3 1 430 1 420 0.0 614
MS.gene87295.t1 AT2G20440 53.864 440 177 4 1 440 7 420 0.0 512
MS.gene87295.t1 AT2G20440 53.864 440 177 4 1 440 7 420 0.0 512
MS.gene87295.t1 AT4G28550 53.409 440 179 4 1 440 7 420 3.16e-178 505
MS.gene87295.t1 AT2G20440 56.135 326 122 2 1 326 7 311 1.15e-139 404
MS.gene87295.t1 AT4G28550 56.173 324 121 2 1 324 7 309 5.78e-139 402
MS.gene87295.t1 AT4G28550 56.000 325 122 2 1 325 7 310 2.03e-138 400
MS.gene87295.t1 AT2G20440 50.909 330 136 4 111 440 1 304 5.58e-122 357
MS.gene87295.t1 AT3G59570 37.386 329 155 4 158 439 339 663 1.44e-58 204
MS.gene87295.t1 AT3G59570 42.391 92 52 1 30 120 44 135 5.66e-15 77.8
MS.gene87295.t1 AT2G43490 53.801 171 78 1 162 332 339 508 4.93e-55 195
MS.gene87295.t1 AT2G43490 37.410 139 77 5 30 166 44 174 3.33e-16 81.6
MS.gene87295.t1 AT2G43490 53.801 171 78 1 162 332 339 508 4.93e-55 195
MS.gene87295.t1 AT2G43490 37.410 139 77 5 30 166 44 174 3.33e-16 81.6
MS.gene87295.t1 AT2G43490 53.801 171 78 1 162 332 339 508 4.93e-55 195
MS.gene87295.t1 AT2G43490 37.410 139 77 5 30 166 44 174 3.33e-16 81.6
MS.gene87295.t1 AT2G43490 53.801 171 78 1 162 332 339 508 4.93e-55 195
MS.gene87295.t1 AT2G43490 37.410 139 77 5 30 166 44 174 3.33e-16 81.6
MS.gene87295.t1 AT2G43490 53.801 171 78 1 162 332 339 508 5.12e-55 195
MS.gene87295.t1 AT2G43490 37.410 139 77 5 30 166 44 174 3.24e-16 81.6
MS.gene87295.t1 AT2G43490 53.801 171 78 1 162 332 335 504 5.33e-55 195
MS.gene87295.t1 AT2G43490 36.806 144 81 5 25 166 35 170 3.67e-17 84.7
MS.gene87295.t1 AT2G43490 53.801 171 78 1 162 332 335 504 5.33e-55 195
MS.gene87295.t1 AT2G43490 36.806 144 81 5 25 166 35 170 3.67e-17 84.7
MS.gene87295.t1 AT2G43490 53.801 171 78 1 162 332 339 508 5.78e-55 194
MS.gene87295.t1 AT2G43490 37.410 139 77 5 30 166 44 174 1.82e-16 82.4
MS.gene87295.t1 AT3G59570 51.429 175 84 1 158 332 339 512 8.64e-52 185
MS.gene87295.t1 AT3G59570 43.333 90 50 1 30 118 44 133 6.09e-15 77.8
MS.gene87295.t1 AT3G59570 51.429 175 84 1 158 332 339 512 1.18e-51 186
MS.gene87295.t1 AT3G59570 42.391 92 52 1 30 120 44 135 6.31e-15 77.8
MS.gene87295.t1 AT5G52580 28.346 254 123 4 185 429 456 659 3.01e-29 121
MS.gene87295.t1 AT5G41940 34.615 234 119 8 206 435 345 548 3.12e-29 120
MS.gene87295.t1 AT5G41940 34.286 140 87 2 34 168 87 226 1.45e-16 82.4
MS.gene87295.t1 AT5G52580 28.346 254 123 4 185 429 439 642 3.32e-29 120
MS.gene87295.t1 AT5G52580 28.346 254 123 4 185 429 445 648 4.03e-29 120
MS.gene87295.t1 AT5G53570 44.715 123 66 1 206 328 338 458 1.75e-28 118
MS.gene87295.t1 AT5G53570 41.237 97 52 3 24 118 86 179 2.74e-12 68.9
MS.gene87295.t1 AT5G53570 44.715 123 66 1 206 328 365 485 2.43e-28 118
MS.gene87295.t1 AT5G53570 41.237 97 52 3 24 118 113 206 3.08e-12 68.9
MS.gene87295.t1 AT5G24390 41.463 123 70 1 206 328 317 437 4.43e-27 114
MS.gene87295.t1 AT3G49350 28.205 234 134 4 206 435 330 533 2.80e-26 111
MS.gene87295.t1 AT1G04830 26.573 286 171 11 67 333 125 390 3.47e-16 80.9
MS.gene87295.t1 AT1G04830 26.573 286 171 11 67 333 125 390 3.72e-16 80.9

Find 95 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTGTCTGGATTTCTTTC+TGG 0.022455 2.2:-14098673 None:intergenic
AAGAAAACTTGTCAAAATTA+TGG 0.190885 2.2:+14098966 MS.gene87295:CDS
ATAAAATACCTATATGTTTA+TGG 0.198183 2.2:-14099673 None:intergenic
CGTTTGGTGCTAGGCTTTCT+TGG 0.202651 2.2:-14101752 None:intergenic
CCTATATGTTTATGGAGTTT+TGG 0.239607 2.2:-14099665 None:intergenic
CGCCAATTGTTTCCTCTTGT+TGG 0.248172 2.2:+14098580 MS.gene87295:CDS
AGGGAGTCCATCCATCAATT+AGG 0.263963 2.2:+14098188 MS.gene87295:intron
GGAGGCTCAACTAAGTAATT+TGG 0.270154 2.2:+14099619 MS.gene87295:CDS
CATCAATTAGGGGAGAAGTT+TGG 0.292286 2.2:+14098200 MS.gene87295:CDS
ATCAATTAGGGGAGAAGTTT+GGG 0.302400 2.2:+14098201 MS.gene87295:CDS
AAACACTAAGTCCAAGAAAA+TGG 0.315609 2.2:+14097877 MS.gene87295:CDS
CAAACTTCTCCCCTAATTGA+TGG 0.323763 2.2:-14098199 None:intergenic
CATCCAAGCCTCGCGCTTCA+TGG 0.324462 2.2:-14100904 None:intergenic
GGGAGTCCATCCATCAATTA+GGG 0.330099 2.2:+14098189 MS.gene87295:intron
GATGTACTGGTCGCACTCTT+GGG 0.336065 2.2:+14099594 MS.gene87295:CDS
ATGATGAAGCAGATGCATTT+TGG 0.338265 2.2:+14099398 MS.gene87295:CDS
AGATGTACTGGTCGCACTCT+TGG 0.345747 2.2:+14099593 MS.gene87295:CDS
AGGAAATCTAGATGCCAAAA+AGG 0.346102 2.2:+14101242 MS.gene87295:CDS
ATGTTAACTCTCCATCAAAT+AGG 0.350184 2.2:+14098790 MS.gene87295:CDS
TCATACATCAAGAACAAATA+AGG 0.353993 2.2:-14100701 None:intergenic
CTTTCGTCAAATGTACTCTT+CGG 0.363004 2.2:-14098247 None:intergenic
AGAAAACTTGTCAAAATTAT+GGG 0.382772 2.2:+14098967 MS.gene87295:CDS
TACTTCCTCAAGATAATAAT+AGG 0.382978 2.2:+14098704 MS.gene87295:CDS
ATTTCTTTCTGGCATAATCA+TGG 0.383727 2.2:-14098662 None:intergenic
TTTGTGATTCATTGTACCTA+TGG 0.385679 2.2:+14099998 MS.gene87295:CDS
AAATTCACAAACCTATTTGA+TGG 0.386030 2.2:-14098801 None:intergenic
TTTACAGAATCTATACTTGA+AGG 0.394310 2.2:-14098727 None:intergenic
CCAAAACTCCATAAACATAT+AGG 0.406934 2.2:+14099665 MS.gene87295:CDS
GCAACAAGGAAAACAGATAT+AGG 0.410679 2.2:-14100848 None:intergenic
ATTTACTCAAGAAGGGTATC+TGG 0.414638 2.2:+14097908 MS.gene87295:CDS
CATCTCAAGATTCAAGATCA+AGG 0.418043 2.2:+14096854 MS.gene87295:CDS
GAGAGACAAAATATGAGAAA+TGG 0.418641 2.2:+14100800 MS.gene87295:CDS
ATCATTACTGCAATCTGGTC+TGG 0.419284 2.2:-14096826 None:intergenic
TTTCTTTCTGGCATAATCAT+GGG 0.419894 2.2:-14098661 None:intergenic
CATCAAGAAGAATTATCATT+GGG 0.422403 2.2:-14099378 None:intergenic
CAAGAAGGGTATCTGGATAT+AGG 0.425363 2.2:+14097915 MS.gene87295:CDS
CTTGTGATGTGGAGAGATCC+AGG 0.427729 2.2:+14096777 None:intergenic
ATATTCTTGCAGTTTATGCT+TGG 0.433846 2.2:+14098990 MS.gene87295:CDS
TTTCGTCAAATGTACTCTTC+GGG 0.441710 2.2:-14098246 None:intergenic
CTTGATCTTGAATCTTGAGA+TGG 0.445826 2.2:-14096853 None:intergenic
ATAATCATGGGGTCTTGAAT+TGG 0.449407 2.2:-14098649 None:intergenic
TCATCAAGAAGAATTATCAT+TGG 0.451073 2.2:-14099379 None:intergenic
GCTTGGATAGATAAAGAAGT+TGG 0.451389 2.2:+14099007 MS.gene87295:CDS
TTGTGATTCATTGTACCTAT+GGG 0.454384 2.2:+14099999 MS.gene87295:CDS
TTGTTTCCTCTTGTTGGAAG+TGG 0.462346 2.2:+14098586 MS.gene87295:CDS
AGTACAGCTAATCCCTTGTC+TGG 0.469428 2.2:-14098685 None:intergenic
CGAGGAAATTTCAGATGTAC+TGG 0.471593 2.2:+14099581 MS.gene87295:CDS
GGAACATCATTACTGCAATC+TGG 0.472237 2.2:-14096831 None:intergenic
CATGATGCATTTACTCAAGA+AGG 0.472341 2.2:+14097900 MS.gene87295:CDS
ACTCCATGAAGCGCGAGGCT+TGG 0.472658 2.2:+14100901 MS.gene87295:CDS
TTGACGTGGTTCGCACTGAT+AGG 0.478186 2.2:+14098921 MS.gene87295:CDS
AAAGAATCAGCTGAAACTCC+TGG 0.480245 2.2:-14096795 None:intergenic
CAGATATTGAATGACACAAC+AGG 0.486107 2.2:+14101222 MS.gene87295:intron
TGGTCGCACTCTTGGGGTGG+AGG 0.488394 2.2:+14099601 MS.gene87295:CDS
GATGGAGAGTTAACATCCAC+TGG 0.490352 2.2:-14098783 None:intergenic
TGGCCATCATCAGTAATTAC+AGG 0.493011 2.2:-14098625 None:intergenic
TTCCAACAAGAGGAAACAAT+TGG 0.498284 2.2:-14098582 None:intergenic
TTCTTTCTGGCATAATCATG+GGG 0.501541 2.2:-14098660 None:intergenic
TAGGTACAATGAATCACAAA+AGG 0.507991 2.2:-14099995 None:intergenic
GTAAAAGCTGAGGGCGTCAA+AGG 0.527510 2.2:+14100743 MS.gene87295:CDS
TCACCTGTAATTACTGATGA+TGG 0.529934 2.2:+14098622 MS.gene87295:CDS
AGGAAAACAGATATAGGAAG+AGG 0.540547 2.2:-14100842 None:intergenic
GAATTATCATTGGGGAGCAT+AGG 0.542492 2.2:-14099369 None:intergenic
TTGATCTTGAATCTTGAGAT+GGG 0.545349 2.2:-14096852 None:intergenic
ATCAAATAAGAGAACGCCGA+AGG 0.555836 2.2:+14098272 MS.gene87295:CDS
TACTGGTCGCACTCTTGGGG+TGG 0.558646 2.2:+14099598 MS.gene87295:CDS
GAAGGCCTATTATTATCTTG+AGG 0.560973 2.2:-14098709 None:intergenic
TGGAGAACAGAACATATTGG+TGG 0.562536 2.2:+14099916 MS.gene87295:intron
CTTCTCCCCTAATTGATGGA+TGG 0.563411 2.2:-14098195 None:intergenic
TCAGGATGCAATATGCTACA+TGG 0.565622 2.2:+14098545 MS.gene87295:intron
TCATGGGGTCTTGAATTGGT+TGG 0.566507 2.2:-14098645 None:intergenic
ATGTACTGGTCGCACTCTTG+GGG 0.573792 2.2:+14099595 MS.gene87295:CDS
AAAGAAGTTGGATACGGTCA+AGG 0.579690 2.2:+14099019 MS.gene87295:CDS
TGATTCATTGTACCTATGGG+AGG 0.581982 2.2:+14100002 MS.gene87295:CDS
ATCAGCTTCTGTAAAAGCTG+AGG 0.587749 2.2:+14100733 MS.gene87295:CDS
CTTTCAACACACCAGCAACA+AGG 0.588036 2.2:-14100862 None:intergenic
AATCGACCACTTCCAACAAG+AGG 0.590144 2.2:-14098592 None:intergenic
ATAGATAAAGAAGTTGGATA+CGG 0.592454 2.2:+14099013 MS.gene87295:CDS
AGGCTTGGATGATGTTGTCA+AGG 0.604218 2.2:+14100916 MS.gene87295:CDS
TCAGCTTCTGTAAAAGCTGA+GGG 0.607394 2.2:+14100734 MS.gene87295:CDS
ATGATGCATTTACTCAAGAA+GGG 0.608798 2.2:+14097901 MS.gene87295:CDS
GGTTCGCACTGATAGGACAT+TGG 0.613291 2.2:+14098928 MS.gene87295:CDS
CCAGAAAGAAATCCAGACAA+GGG 0.614978 2.2:+14098673 MS.gene87295:CDS
AGAACAGAACATATTGGTGG+AGG 0.618638 2.2:+14099919 MS.gene87295:intron
AAGCCAGACACACCTCCCAT+AGG 0.625296 2.2:-14100014 None:intergenic
GCCAGAAAGAAATCCAGACA+AGG 0.637010 2.2:+14098672 MS.gene87295:CDS
GCAAAGTCAATACGACAATG+TGG 0.656189 2.2:+14100770 MS.gene87295:CDS
CTTTGAGACGAATCTACCGA+GGG 0.661418 2.2:+14097943 MS.gene87295:CDS
ATACGTTTCAGGTCTTGACG+TGG 0.662348 2.2:+14098907 MS.gene87295:intron
CAGACAAGAAACTAATCCAG+TGG 0.668020 2.2:+14098767 MS.gene87295:CDS
ATCAAGAAGAATTATCATTG+GGG 0.677023 2.2:-14099377 None:intergenic
GGAGTCCATCCATCAATTAG+GGG 0.691468 2.2:+14098190 MS.gene87295:CDS
AAACTACTCCATGAAGCGCG+AGG 0.691668 2.2:+14100896 MS.gene87295:CDS
ACTTTGAGACGAATCTACCG+AGG 0.700779 2.2:+14097942 MS.gene87295:CDS
TTTGAGACGAATCTACCGAG+GGG 0.798701 2.2:+14097944 MS.gene87295:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTAAAGTTTTTTTTATAAA+TGG + chr2.2:14097176-14097195 MS.gene87295:intron 10.0%
!!! TTTTATTCAACAAATTTTAA+TGG - chr2.2:14099840-14099859 None:intergenic 10.0%
!!! TTTTTTTTATTCTAATAAGA+AGG + chr2.2:14099135-14099154 MS.gene87295:intron 10.0%
!! AATTTAACACAAACATAAAA+AGG - chr2.2:14101163-14101182 None:intergenic 15.0%
!! ATAAAATACCTATATGTTTA+TGG - chr2.2:14099676-14099695 None:intergenic 15.0%
!!! AAAGTTTGATTTTTATTTCT+GGG + chr2.2:14096893-14096912 MS.gene87295:intron 15.0%
!!! AATTTACTGTCTTTTAATTT+TGG + chr2.2:14099896-14099915 MS.gene87295:intron 15.0%
!!! ATAATCATCAATACTTTTAA+GGG - chr2.2:14098078-14098097 None:intergenic 15.0%
!!! ATATCATAAACTGTTTTAAT+GGG - chr2.2:14100584-14100603 None:intergenic 15.0%
!!! ATTTACATTTTATTGAACAA+TGG + chr2.2:14100062-14100081 MS.gene87295:intron 15.0%
!!! GTTTTTGTTATAATTTTGTT+TGG + chr2.2:14096915-14096934 MS.gene87295:intron 15.0%
!!! TATATCATAAACTGTTTTAA+TGG - chr2.2:14100585-14100604 None:intergenic 15.0%
!! AAACAAAAAATGTTAACTAG+TGG + chr2.2:14101430-14101449 MS.gene87295:intron 20.0%
!! AAGAAAACTTGTCAAAATTA+TGG + chr2.2:14098966-14098985 MS.gene87295:CDS 20.0%
!! AATAAACCAAGTAAACAAAT+TGG + chr2.2:14099165-14099184 MS.gene87295:intron 20.0%
!! ACATTGAAACAATTATGAAA+TGG - chr2.2:14098308-14098327 None:intergenic 20.0%
!! AGAAAACTTGTCAAAATTAT+GGG + chr2.2:14098967-14098986 MS.gene87295:CDS 20.0%
!! CAGAAATAAAAATCAAACTT+TGG - chr2.2:14096894-14096913 None:intergenic 20.0%
!! TAAAAGAGATAATAGAGATA+AGG - chr2.2:14099458-14099477 None:intergenic 20.0%
!! TCACAAAAAATATTTGAGAA+AGG + chr2.2:14101287-14101306 MS.gene87295:CDS 20.0%
!! TTACCATGTGATTTATATTA+CGG - chr2.2:14098866-14098885 None:intergenic 20.0%
!! TTTCCATTAATAATTTCTTC+AGG - chr2.2:14099796-14099815 None:intergenic 20.0%
!! TTTGTTAAAATTTCAAACCA+GGG + chr2.2:14098169-14098188 MS.gene87295:intron 20.0%
!!! AAATTTTTAACAGATGATGT+GGG + chr2.2:14100664-14100683 MS.gene87295:intron 20.0%
!!! ATTTGTTAAAATTTCAAACC+AGG + chr2.2:14098168-14098187 MS.gene87295:intron 20.0%
!!! CAAAGTTTGATTTTTATTTC+TGG + chr2.2:14096892-14096911 MS.gene87295:intron 20.0%
!!! CATAATCATCAATACTTTTA+AGG - chr2.2:14098079-14098098 None:intergenic 20.0%
!!! CTTAAAAGTATTGATGATTA+TGG + chr2.2:14098077-14098096 MS.gene87295:intron 20.0%
!!! TATCATAAACTGTTTTAATG+GGG - chr2.2:14100583-14100602 None:intergenic 20.0%
!!! TTTAAGATAGTGTCTTTTTT+TGG + chr2.2:14097546-14097565 MS.gene87295:intron 20.0%
!!! TTTTCTTAATTTTGGAAACT+CGG + chr2.2:14097787-14097806 MS.gene87295:intron 20.0%
! AAAAAAAACTACTACTTGCA+TGG - chr2.2:14099120-14099139 None:intergenic 25.0%
! AAAATGTTAACTAGTGGTTA+AGG + chr2.2:14101436-14101455 MS.gene87295:intron 25.0%
! AAATATGATTAAGATCAGAC+AGG - chr2.2:14098044-14098063 None:intergenic 25.0%
! AAATTCACAAACCTATTTGA+TGG - chr2.2:14098804-14098823 None:intergenic 25.0%
! AACGTATTATGTGCATAAAA+AGG - chr2.2:14098894-14098913 None:intergenic 25.0%
! AAGTATGTAATTCAAGTGTT+CGG + chr2.2:14099507-14099526 MS.gene87295:intron 25.0%
! AATAAACTTTAATTGCTTGC+AGG + chr2.2:14101729-14101748 MS.gene87295:intron 25.0%
! AATAGTCATAAGCAATAAGT+TGG - chr2.2:14101564-14101583 None:intergenic 25.0%
! ACCGTAGTACTATATATATA+TGG - chr2.2:14100330-14100349 None:intergenic 25.0%
! ACGTATTATGTGCATAAAAA+GGG - chr2.2:14098893-14098912 None:intergenic 25.0%
! AGACTTTGCAATAAATGTAT+TGG - chr2.2:14101390-14101409 None:intergenic 25.0%
! ATAGATAAAGAAGTTGGATA+CGG + chr2.2:14099013-14099032 MS.gene87295:CDS 25.0%
! ATCAAGAAGAATTATCATTG+GGG - chr2.2:14099380-14099399 None:intergenic 25.0%
! ATGCCTGAAGAAATTATTAA+TGG + chr2.2:14099790-14099809 MS.gene87295:intron 25.0%
! ATTATCACATGTATCATAGT+TGG - chr2.2:14099096-14099115 None:intergenic 25.0%
! ATTATTGGATTGATGGAAAT+TGG + chr2.2:14096970-14096989 MS.gene87295:intron 25.0%
! CAAGAATTTCTATGTTTATG+TGG + chr2.2:14098128-14098147 MS.gene87295:intron 25.0%
! CATCAAGAAGAATTATCATT+GGG - chr2.2:14099381-14099400 None:intergenic 25.0%
! CTAACACTATCTCATTAATT+CGG - chr2.2:14100147-14100166 None:intergenic 25.0%
! GATAACATTGTGTGTTAAAT+GGG + chr2.2:14097440-14097459 MS.gene87295:intron 25.0%
! GCCATATATATATAGTACTA+CGG + chr2.2:14100326-14100345 MS.gene87295:intron 25.0%
! TACTTCCTCAAGATAATAAT+AGG + chr2.2:14098704-14098723 MS.gene87295:CDS 25.0%
! TCATACATCAAGAACAAATA+AGG - chr2.2:14100704-14100723 None:intergenic 25.0%
! TCATCAAGAAGAATTATCAT+TGG - chr2.2:14099382-14099401 None:intergenic 25.0%
! TGATAACATTGTGTGTTAAA+TGG + chr2.2:14097439-14097458 MS.gene87295:intron 25.0%
! TTAACACACAATGTTATCAA+CGG - chr2.2:14097438-14097457 None:intergenic 25.0%
! TTTACAGAATCTATACTTGA+AGG - chr2.2:14098730-14098749 None:intergenic 25.0%
! TTTATTGCAAAGTCTTAGAT+TGG + chr2.2:14101395-14101414 MS.gene87295:intron 25.0%
! TTTCTTCAACATAACAAAAG+AGG - chr2.2:14099865-14099884 None:intergenic 25.0%
!! AAACTTTTGTTCATTTTGAG+GGG + chr2.2:14097257-14097276 MS.gene87295:intron 25.0%
!! ACTTCTTGATTGTTATTACA+TGG + chr2.2:14097842-14097861 MS.gene87295:intron 25.0%
!! ACTTTTATGTTTATGTCATC+AGG + chr2.2:14098527-14098546 MS.gene87295:intron 25.0%
!! AGAAACTTTTGTTCATTTTG+AGG + chr2.2:14097255-14097274 MS.gene87295:intron 25.0%
!! AGTTCAAGTAATGATCTTTT+AGG - chr2.2:14098505-14098524 None:intergenic 25.0%
!! ATAGGTTTGTGAATTTTTCT+TGG + chr2.2:14098808-14098827 MS.gene87295:intron 25.0%
!! ATGCAAATGATTTTGTGTTA+AGG - chr2.2:14097704-14097723 None:intergenic 25.0%
!! GAAACTTTTGTTCATTTTGA+GGG + chr2.2:14097256-14097275 MS.gene87295:intron 25.0%
!! GAAATTTTTAACAGATGATG+TGG + chr2.2:14100663-14100682 MS.gene87295:intron 25.0%
!! TAGGTTTGTGAATTTTTCTT+GGG + chr2.2:14098809-14098828 MS.gene87295:intron 25.0%
!! TTGTTTCCAATTTGTTTACT+TGG - chr2.2:14099174-14099193 None:intergenic 25.0%
!!! ATCATAAACTGTTTTAATGG+GGG - chr2.2:14100582-14100601 None:intergenic 25.0%
!!! CAATGTTTTAAAAACTCAAC+CGG + chr2.2:14098322-14098341 MS.gene87295:intron 25.0%
!!! CTTTTGTTATGTTGAAGAAA+TGG + chr2.2:14099865-14099884 MS.gene87295:intron 25.0%
AAACACTAAGTCCAAGAAAA+TGG + chr2.2:14097877-14097896 MS.gene87295:CDS 30.0%
AACAATTCACAATTCTGAAC+AGG + chr2.2:14099337-14099356 MS.gene87295:intron 30.0%
ATATTCTTGCAGTTTATGCT+TGG + chr2.2:14098990-14099009 MS.gene87295:CDS 30.0%
ATGATGCATTTACTCAAGAA+GGG + chr2.2:14097901-14097920 MS.gene87295:CDS 30.0%
ATGTTAACTCTCCATCAAAT+AGG + chr2.2:14098790-14098809 MS.gene87295:CDS 30.0%
ATTGTCAAAAAAATCCGCTA+TGG - chr2.2:14097339-14097358 None:intergenic 30.0%
CATATATAGACACATAAGAG+AGG - chr2.2:14100474-14100493 None:intergenic 30.0%
CCAAAACTCCATAAACATAT+AGG + chr2.2:14099665-14099684 MS.gene87295:CDS 30.0%
GAAGTGTATTATTGGATTGA+TGG + chr2.2:14096963-14096982 MS.gene87295:intron 30.0%
GAGAGACAAAATATGAGAAA+TGG + chr2.2:14100800-14100819 MS.gene87295:CDS 30.0%
GTAAAACTATCTGTTGAGTA+TGG - chr2.2:14100499-14100518 None:intergenic 30.0%
TAGGTACAATGAATCACAAA+AGG - chr2.2:14099998-14100017 None:intergenic 30.0%
TAGTACATAACAATGAAGCA+CGG - chr2.2:14097117-14097136 None:intergenic 30.0%
TATAAACTGTTGTTGGGTAT+AGG + chr2.2:14096941-14096960 MS.gene87295:intron 30.0%
TCACCGTAATATAAATCACA+TGG + chr2.2:14098860-14098879 MS.gene87295:intron 30.0%
TGGTGATATAAACTGTTGTT+GGG + chr2.2:14096935-14096954 MS.gene87295:intron 30.0%
TTATGCACATAATACGTTTC+AGG + chr2.2:14098896-14098915 MS.gene87295:intron 30.0%
TTCTCGATATATCAATCTAG+TGG - chr2.2:14099212-14099231 None:intergenic 30.0%
TTGAATGTGATGACAAGTAT+TGG + chr2.2:14097313-14097332 MS.gene87295:intron 30.0%
TTGATCTTGAATCTTGAGAT+GGG - chr2.2:14096855-14096874 None:intergenic 30.0%
TTGTGATTCATTGTACCTAT+GGG + chr2.2:14099999-14100018 MS.gene87295:CDS 30.0%
TTTGTGATTCATTGTACCTA+TGG + chr2.2:14099998-14100017 MS.gene87295:CDS 30.0%
! AAGCAATAAGTTGGCAAAAA+TGG - chr2.2:14101555-14101574 None:intergenic 30.0%
! AAGTTTTACATCGTACCATA+TGG - chr2.2:14101681-14101700 None:intergenic 30.0%
! ATTTCTTTCTGGCATAATCA+TGG - chr2.2:14098665-14098684 None:intergenic 30.0%
! CCTATATGTTTATGGAGTTT+TGG - chr2.2:14099668-14099687 None:intergenic 30.0%
! CGAATTTTCTAACTCGATTT+GGG + chr2.2:14099734-14099753 MS.gene87295:intron 30.0%
! GAAGTTTGGGAATTTTTACT+TGG + chr2.2:14098214-14098233 MS.gene87295:CDS 30.0%
! TCGAATTTTCTAACTCGATT+TGG + chr2.2:14099733-14099752 MS.gene87295:intron 30.0%
! TGAAATTGATGTTCCCTTTT+TGG + chr2.2:14101016-14101035 MS.gene87295:intron 30.0%
! TTAGGTCTAGAATTCAGAAA+TGG - chr2.2:14098487-14098506 None:intergenic 30.0%
! TTGGTGATATAAACTGTTGT+TGG + chr2.2:14096934-14096953 MS.gene87295:intron 30.0%
! TTTCAGATAGTTGATATGTG+AGG + chr2.2:14097290-14097309 MS.gene87295:intron 30.0%
! TTTCTTTCTGGCATAATCAT+GGG - chr2.2:14098664-14098683 None:intergenic 30.0%
!! ACATAGCTTGTTAACCAAAA+AGG - chr2.2:14101033-14101052 None:intergenic 30.0%
!! AGCTTGTTAAGTTGATAAAC+AGG + chr2.2:14097231-14097250 MS.gene87295:intron 30.0%
!! AGTACTGATCTATTTCAAAG+AGG - chr2.2:14099055-14099074 None:intergenic 30.0%
!! CATAGCTTGTTAACCAAAAA+GGG - chr2.2:14101032-14101051 None:intergenic 30.0%
!! TTTTGGAGAACAGAACATAT+TGG + chr2.2:14099913-14099932 MS.gene87295:intron 30.0%
!!! GATTTTTTTGACAATCTCCA+TGG + chr2.2:14097344-14097363 MS.gene87295:intron 30.0%
AAGCTTAGAGACATTGCAAA+TGG - chr2.2:14099309-14099328 None:intergenic 35.0%
AAGTTGGCAAAAATGGCATA+TGG - chr2.2:14101548-14101567 None:intergenic 35.0%
AGAACGCAAATTGCAAACAA+TGG + chr2.2:14100195-14100214 MS.gene87295:intron 35.0%
AGGAAAACAGATATAGGAAG+AGG - chr2.2:14100845-14100864 None:intergenic 35.0%
AGGAAATCTAGATGCCAAAA+AGG + chr2.2:14101242-14101261 MS.gene87295:CDS 35.0%
ATAATCATGGGGTCTTGAAT+TGG - chr2.2:14098652-14098671 None:intergenic 35.0%
ATATAAGAGCAAATACCCCT+CGG - chr2.2:14097962-14097981 None:intergenic 35.0%
ATATCTGAATCCTAGCTTGA+TGG + chr2.2:14098014-14098033 MS.gene87295:intron 35.0%
ATCAATTAGGGGAGAAGTTT+GGG + chr2.2:14098201-14098220 MS.gene87295:CDS 35.0%
CAACTATTCGGTTATTTGAG+TGG - chr2.2:14098415-14098434 None:intergenic 35.0%
CAGATATTGAATGACACAAC+AGG + chr2.2:14101222-14101241 MS.gene87295:intron 35.0%
CATCTCAAGATTCAAGATCA+AGG + chr2.2:14096854-14096873 MS.gene87295:CDS 35.0%
CATGATGCATTTACTCAAGA+AGG + chr2.2:14097900-14097919 MS.gene87295:CDS 35.0%
CGAAATACAGATCTATGTGA+CGG - chr2.2:14101492-14101511 None:intergenic 35.0%
CTAGACTTTCAATCTCACAA+TGG + chr2.2:14097747-14097766 MS.gene87295:intron 35.0%
CTTGATCTTGAATCTTGAGA+TGG - chr2.2:14096856-14096875 None:intergenic 35.0%
CTTTCGTCAAATGTACTCTT+CGG - chr2.2:14098250-14098269 None:intergenic 35.0%
CTTTGCTAAGTTGTCAGTAA+TGG + chr2.2:14097471-14097490 MS.gene87295:intron 35.0%
GAAGGCCTATTATTATCTTG+AGG - chr2.2:14098712-14098731 None:intergenic 35.0%
GAGAATACGAAGATTGTACA+AGG - chr2.2:14101335-14101354 None:intergenic 35.0%
GCAACAAGGAAAACAGATAT+AGG - chr2.2:14100851-14100870 None:intergenic 35.0%
GCTTGGATAGATAAAGAAGT+TGG + chr2.2:14099007-14099026 MS.gene87295:CDS 35.0%
GTTTAACTGGTTGAACTGTA+TGG + chr2.2:14098451-14098470 MS.gene87295:intron 35.0%
TCACCTGTAATTACTGATGA+TGG + chr2.2:14098622-14098641 MS.gene87295:CDS 35.0%
TGCAACCTTGCAACAAATAA+TGG + chr2.2:14099270-14099289 MS.gene87295:intron 35.0%
TTCCAACAAGAGGAAACAAT+TGG - chr2.2:14098585-14098604 None:intergenic 35.0%
TTGCAAGGTTGCAAGAAAAA+TGG - chr2.2:14099263-14099282 None:intergenic 35.0%
TTTCGTCAAATGTACTCTTC+GGG - chr2.2:14098249-14098268 None:intergenic 35.0%
TTTCTCAGTAGTTAGCCATA+TGG + chr2.2:14101663-14101682 MS.gene87295:intron 35.0%
! ACTTGCCATTATTTGTTGCA+AGG - chr2.2:14099278-14099297 None:intergenic 35.0%
! ATATCTGTTTTCCTTGTTGC+TGG + chr2.2:14100851-14100870 MS.gene87295:CDS 35.0%
! ATGATGAAGCAGATGCATTT+TGG + chr2.2:14099398-14099417 MS.gene87295:CDS 35.0%
! ATGTTGTCAAGGTTAGTCAT+GGG + chr2.2:14100927-14100946 MS.gene87295:intron 35.0%
! GGGTATAGGAAGTGTATTAT+TGG + chr2.2:14096955-14096974 MS.gene87295:intron 35.0%
! GTATCCATCATGGTGTTTTA+TGG + chr2.2:14097387-14097406 MS.gene87295:intron 35.0%
! GTCTAGAATTCAGAAATGGT+GGG - chr2.2:14098483-14098502 None:intergenic 35.0%
! TGATTGTTATTACATGGCTC+AGG + chr2.2:14097848-14097867 MS.gene87295:intron 35.0%
! TTCTTTCTGGCATAATCATG+GGG - chr2.2:14098663-14098682 None:intergenic 35.0%
!! ATTGTGTGTTAAATGGGTTG+TGG + chr2.2:14097446-14097465 MS.gene87295:intron 35.0%
!! ATTTACTCAAGAAGGGTATC+TGG + chr2.2:14097908-14097927 MS.gene87295:CDS 35.0%
!! ATTTGCTTTTCGGATGCTTA+TGG + chr2.2:14099951-14099970 MS.gene87295:CDS 35.0%
!! GCGACTATGTATTTGCTTTT+CGG + chr2.2:14099941-14099960 MS.gene87295:CDS 35.0%
!!! AATGCATCATGCCATTTTCT+TGG - chr2.2:14097891-14097910 None:intergenic 35.0%
!!! ATTTTCTAACTCGATTTGGG+TGG + chr2.2:14099737-14099756 MS.gene87295:intron 35.0%
!!! GTTGTCAGTAATGGTTTTGT+TGG + chr2.2:14097480-14097499 MS.gene87295:intron 35.0%
AAAGAAGTTGGATACGGTCA+AGG + chr2.2:14099019-14099038 MS.gene87295:CDS 40.0%
AAAGAATCAGCTGAAACTCC+TGG - chr2.2:14096798-14096817 None:intergenic 40.0%
AAATGGAAGCTGACTACCTT+CGG - chr2.2:14098291-14098310 None:intergenic 40.0%
AACCGAATAGTTGACAGCAT+CGG + chr2.2:14098422-14098441 MS.gene87295:intron 40.0%
AACCGATGCTGTCAACTATT+CGG - chr2.2:14098427-14098446 None:intergenic 40.0%
AATAACACGCAAGATGTCAG+AGG - chr2.2:14101197-14101216 None:intergenic 40.0%
ACACACAATGTTATCAACGG+AGG - chr2.2:14097435-14097454 None:intergenic 40.0%
ACTGGTTGAACTGTATGGTT+CGG + chr2.2:14098456-14098475 MS.gene87295:intron 40.0%
AGAACAGAACATATTGGTGG+AGG + chr2.2:14099919-14099938 MS.gene87295:intron 40.0%
ATAGACACATAAGAGAGGCA+AGG - chr2.2:14100469-14100488 None:intergenic 40.0%
ATCAAATAAGAGAACGCCGA+AGG + chr2.2:14098272-14098291 MS.gene87295:CDS 40.0%
ATCAACACTGCACACCTAAA+AGG - chr2.2:14097060-14097079 None:intergenic 40.0%
ATCAGCTTCTGTAAAAGCTG+AGG + chr2.2:14100733-14100752 MS.gene87295:CDS 40.0%
ATCATTACTGCAATCTGGTC+TGG - chr2.2:14096829-14096848 None:intergenic 40.0%
CAAACTTCTCCCCTAATTGA+TGG - chr2.2:14098202-14098221 None:intergenic 40.0%
CAGACAAGAAACTAATCCAG+TGG + chr2.2:14098767-14098786 MS.gene87295:CDS 40.0%
CAGATCTATGTGACGGTAAA+TGG - chr2.2:14101485-14101504 None:intergenic 40.0%
CATAGTTCAACCACTCAAAC+CGG + chr2.2:14098371-14098390 MS.gene87295:intron 40.0%
CATCAATTAGGGGAGAAGTT+TGG + chr2.2:14098200-14098219 MS.gene87295:CDS 40.0%
CCAGAAAGAAATCCAGACAA+GGG + chr2.2:14098673-14098692 MS.gene87295:CDS 40.0%
CCTAAAAGGCTTTCAATCAG+AGG - chr2.2:14097046-14097065 None:intergenic 40.0%
CGAGGAAATTTCAGATGTAC+TGG + chr2.2:14099581-14099600 MS.gene87295:CDS 40.0%
GAGACATTGCAAATGGTGTT+TGG - chr2.2:14099302-14099321 None:intergenic 40.0%
GATAGTGTTAGAACACCAAC+TGG + chr2.2:14100156-14100175 MS.gene87295:intron 40.0%
GATCGTTTGCTTACACAGTT+CGG + chr2.2:14100223-14100242 MS.gene87295:intron 40.0%
GGAACATCATTACTGCAATC+TGG - chr2.2:14096834-14096853 None:intergenic 40.0%
GGAGGCTCAACTAAGTAATT+TGG + chr2.2:14099619-14099638 MS.gene87295:CDS 40.0%
GGATTGATGGAAATTGGTGT+TGG + chr2.2:14096976-14096995 MS.gene87295:intron 40.0%
GTTTGACTGTTGTTCTGTTC+CGG - chr2.2:14098393-14098412 None:intergenic 40.0%
TAGACACATAAGAGAGGCAA+GGG - chr2.2:14100468-14100487 None:intergenic 40.0%
TCAGCTTCTGTAAAAGCTGA+GGG + chr2.2:14100734-14100753 MS.gene87295:CDS 40.0%
TCAGGATGCAATATGCTACA+TGG + chr2.2:14098545-14098564 MS.gene87295:intron 40.0%
TCCACCATAAAACACCATGA+TGG - chr2.2:14097394-14097413 None:intergenic 40.0%
TGATTCATTGTACCTATGGG+AGG + chr2.2:14100002-14100021 MS.gene87295:CDS 40.0%
TGGAGAACAGAACATATTGG+TGG + chr2.2:14099916-14099935 MS.gene87295:intron 40.0%
TGGCCATCATCAGTAATTAC+AGG - chr2.2:14098628-14098647 None:intergenic 40.0%
TTGTTTCCTCTTGTTGGAAG+TGG + chr2.2:14098586-14098605 MS.gene87295:CDS 40.0%
! CCTCTGATTGAAAGCCTTTT+AGG + chr2.2:14097043-14097062 MS.gene87295:intron 40.0%
! CTTGGGCACTATTTTGTAGT+AGG + chr2.2:14098826-14098845 MS.gene87295:intron 40.0%
! GAATTATCATTGGGGAGCAT+AGG - chr2.2:14099372-14099391 None:intergenic 40.0%
! GATGTTGTCAAGGTTAGTCA+TGG + chr2.2:14100926-14100945 MS.gene87295:intron 40.0%
! GGTCTAGAATTCAGAAATGG+TGG - chr2.2:14098484-14098503 None:intergenic 40.0%
! TCCATCATGGTGTTTTATGG+TGG + chr2.2:14097390-14097409 MS.gene87295:intron 40.0%
! TTTCATTTTCCGCTACCAGT+TGG - chr2.2:14100174-14100193 None:intergenic 40.0%
!! ATGACAAGTATTGGCCATAG+CGG + chr2.2:14097322-14097341 MS.gene87295:intron 40.0%
!! CAAGAAGGGTATCTGGATAT+AGG + chr2.2:14097915-14097934 MS.gene87295:CDS 40.0%
!! GTTCTTGAACTTTTCAAGCG+AGG + chr2.2:14099563-14099582 MS.gene87295:intron 40.0%
AAGTTGGATACGGTCAAGGT+GGG + chr2.2:14099023-14099042 MS.gene87295:intron 45.0%
AATCGACCACTTCCAACAAG+AGG - chr2.2:14098595-14098614 None:intergenic 45.0%
ACGGACACAAACATGAACAC+CGG - chr2.2:14097098-14097117 None:intergenic 45.0%
AGACACATAAGAGAGGCAAG+GGG - chr2.2:14100467-14100486 None:intergenic 45.0%
AGGCTTGGATGATGTTGTCA+AGG + chr2.2:14100916-14100935 MS.gene87295:CDS 45.0%
AGGGAGTCCATCCATCAATT+AGG + chr2.2:14098188-14098207 MS.gene87295:intron 45.0%
AGTACAGCTAATCCCTTGTC+TGG - chr2.2:14098688-14098707 None:intergenic 45.0%
CATCCTTCACAAATTGGCCA+TGG - chr2.2:14097364-14097383 None:intergenic 45.0%
CATGGCCAATTTGTGAAGGA+TGG + chr2.2:14097362-14097381 MS.gene87295:intron 45.0%
CATTGAACTGACAAGACCTG+TGG + chr2.2:14098346-14098365 MS.gene87295:intron 45.0%
CCCTTGTCTGGATTTCTTTC+TGG - chr2.2:14098676-14098695 None:intergenic 45.0%
CGCCAATTGTTTCCTCTTGT+TGG + chr2.2:14098580-14098599 MS.gene87295:CDS 45.0%
CTTCTCCCCTAATTGATGGA+TGG - chr2.2:14098198-14098217 None:intergenic 45.0%
CTTTCAACACACCAGCAACA+AGG - chr2.2:14100865-14100884 None:intergenic 45.0%
GATGGAGAGTTAACATCCAC+TGG - chr2.2:14098786-14098805 None:intergenic 45.0%
GCCAGAAAGAAATCCAGACA+AGG + chr2.2:14098672-14098691 MS.gene87295:CDS 45.0%
GGAGTCCATCCATCAATTAG+GGG + chr2.2:14098190-14098209 MS.gene87295:CDS 45.0%
GGGAGTCCATCCATCAATTA+GGG + chr2.2:14098189-14098208 MS.gene87295:intron 45.0%
GTTAGAACACCAACTGGTAG+CGG + chr2.2:14100162-14100181 MS.gene87295:intron 45.0%
TACCGCCATCCTTCACAAAT+TGG - chr2.2:14097370-14097389 None:intergenic 45.0%
TAGCTGCTCTATAGTCGTAG+AGG - chr2.2:14100262-14100281 None:intergenic 45.0%
TCATGGGGTCTTGAATTGGT+TGG - chr2.2:14098648-14098667 None:intergenic 45.0%
TCTCCATGGCCAATTTGTGA+AGG + chr2.2:14097358-14097377 MS.gene87295:intron 45.0%
TGATGTGTATGTGTCGTGTC+CGG + chr2.2:14097076-14097095 MS.gene87295:intron 45.0%
TGTTATTACATGGCTCAGGC+TGG + chr2.2:14097852-14097871 MS.gene87295:intron 45.0%
! ATACGTTTCAGGTCTTGACG+TGG + chr2.2:14098907-14098926 MS.gene87295:intron 45.0%
! GACAGGTTTTCCATCAAGCT+AGG - chr2.2:14098027-14098046 None:intergenic 45.0%
! GGTCTTGTCAGTTCAATGTC+CGG - chr2.2:14098344-14098363 None:intergenic 45.0%
! GTCGTAGAGGTATGCACAAT+CGG - chr2.2:14100249-14100268 None:intergenic 45.0%
! TAATTGATGGATGGACTCCC+TGG - chr2.2:14098189-14098208 None:intergenic 45.0%
! TTGTCAAGGTTAGTCATGGG+AGG + chr2.2:14100930-14100949 MS.gene87295:intron 45.0%
! TTGTTCTGTTCCGGTTTGAG+TGG - chr2.2:14098384-14098403 None:intergenic 45.0%
! TTTGAGACGAATCTACCGAG+GGG + chr2.2:14097944-14097963 MS.gene87295:CDS 45.0%
!! ACTTTGAGACGAATCTACCG+AGG + chr2.2:14097942-14097961 MS.gene87295:CDS 45.0%
!! CTTTGAGACGAATCTACCGA+GGG + chr2.2:14097943-14097962 MS.gene87295:CDS 45.0%
!! TAGTTGACAGCATCGGTTCA+CGG + chr2.2:14098429-14098448 MS.gene87295:intron 45.0%
!!! TTTTTTATTTTTCTTAATTT+TGG + chr2.2:14097779-14097798 MS.gene87295:intron 5.0%
AAACTACTCCATGAAGCGCG+AGG + chr2.2:14100896-14100915 MS.gene87295:CDS 50.0%
CACGCAAGATGTCAGAGGAA+CGG - chr2.2:14101192-14101211 None:intergenic 50.0%
GAAGTTGGATACGGTCAAGG+TGG + chr2.2:14099022-14099041 MS.gene87295:intron 50.0%
GGCCAATTTGTGAAGGATGG+CGG + chr2.2:14097365-14097384 MS.gene87295:intron 50.0%
GTGGTTGAACTATGAGCCAC+AGG - chr2.2:14098365-14098384 None:intergenic 50.0%
TCTTAGGCCCGACTGTTTGT+CGG - chr2.2:14100405-14100424 None:intergenic 50.0%
TGCCAAAAAGGCTTGCGTTG+AGG + chr2.2:14101254-14101273 MS.gene87295:CDS 50.0%
! AAGGATGGCGGTATCCATCA+TGG + chr2.2:14097377-14097396 MS.gene87295:intron 50.0%
! AGATGTACTGGTCGCACTCT+TGG + chr2.2:14099593-14099612 MS.gene87295:CDS 50.0%
! AGCCTCAACGCAAGCCTTTT+TGG - chr2.2:14101259-14101278 None:intergenic 50.0%
! ATGTACTGGTCGCACTCTTG+GGG + chr2.2:14099595-14099614 MS.gene87295:CDS 50.0%
! GATGTACTGGTCGCACTCTT+GGG + chr2.2:14099594-14099613 MS.gene87295:CDS 50.0%
! GGTTCGCACTGATAGGACAT+TGG + chr2.2:14098928-14098947 MS.gene87295:CDS 50.0%
! TGGCGATGCTACTTCGTTGA+GGG + chr2.2:14097500-14097519 MS.gene87295:intron 50.0%
! TTGACGTGGTTCGCACTGAT+AGG + chr2.2:14098921-14098940 MS.gene87295:CDS 50.0%
! TTGGCGATGCTACTTCGTTG+AGG + chr2.2:14097499-14097518 MS.gene87295:intron 50.0%
!! GCATCGGTTCACGGTTTAAC+TGG + chr2.2:14098438-14098457 MS.gene87295:intron 50.0%
!! GTAAAAGCTGAGGGCGTCAA+AGG + chr2.2:14100743-14100762 MS.gene87295:CDS 50.0%
AAGCCAGACACACCTCCCAT+AGG - chr2.2:14100017-14100036 None:intergenic 55.0%
AATACCCCTGAACCGTACCG+CGG + chr2.2:14100362-14100381 MS.gene87295:intron 55.0%
ACATAAGAGAGGCAAGGGGC+GGG - chr2.2:14100463-14100482 None:intergenic 55.0%
CACATAAGAGAGGCAAGGGG+CGG - chr2.2:14100464-14100483 None:intergenic 55.0%
CTTAGGCCCGACTGTTTGTC+GGG - chr2.2:14100404-14100423 None:intergenic 55.0%
CTTGCAGGCCAAGAAAGCCT+AGG + chr2.2:14101744-14101763 MS.gene87295:intron 55.0%
TGAGCTAGCAAAGCTCCCTC+CGG - chr2.2:14100436-14100455 None:intergenic 55.0%
TTAGGCCCGACTGTTTGTCG+GGG - chr2.2:14100403-14100422 None:intergenic 55.0%
! GTACCTATGGGAGGTGTGTC+TGG + chr2.2:14100011-14100030 MS.gene87295:intron 55.0%
ACTCCATGAAGCGCGAGGCT+TGG + chr2.2:14100901-14100920 MS.gene87295:CDS 60.0%
ATACCCCTGAACCGTACCGC+GGG + chr2.2:14100363-14100382 MS.gene87295:intron 60.0%
CAGTCGGGCCTAAGACACCA+AGG + chr2.2:14100410-14100429 MS.gene87295:intron 60.0%
CATAAGAGAGGCAAGGGGCG+GGG - chr2.2:14100462-14100481 None:intergenic 60.0%
CATCCAAGCCTCGCGCTTCA+TGG - chr2.2:14100907-14100926 None:intergenic 60.0%
CCTAAGACACCAAGGCCGGA+GGG + chr2.2:14100418-14100437 MS.gene87295:intron 60.0%
TACTGGTCGCACTCTTGGGG+TGG + chr2.2:14099598-14099617 MS.gene87295:CDS 60.0%
TAGGCCCGACTGTTTGTCGG+GGG - chr2.2:14100402-14100421 None:intergenic 60.0%
AGCAAAGCTCCCTCCGGCCT+TGG - chr2.2:14100430-14100449 None:intergenic 65.0%
ATCCCCCGCGGTACGGTTCA+GGG - chr2.2:14100370-14100389 None:intergenic 65.0%
CCCCTCCCCCGACAAACAGT+CGG + chr2.2:14100394-14100413 MS.gene87295:intron 65.0%
CCCGACTGTTTGTCGGGGGA+GGG - chr2.2:14100398-14100417 None:intergenic 65.0%
CCCTCCCCCGACAAACAGTC+GGG + chr2.2:14100395-14100414 MS.gene87295:intron 65.0%
CCGACTGTTTGTCGGGGGAG+GGG - chr2.2:14100397-14100416 None:intergenic 65.0%
CGACTGTTTGTCGGGGGAGG+GGG - chr2.2:14100396-14100415 None:intergenic 65.0%
CGGGCCTAAGACACCAAGGC+CGG + chr2.2:14100414-14100433 MS.gene87295:intron 65.0%
GACTGTTTGTCGGGGGAGGG+GGG - chr2.2:14100395-14100414 None:intergenic 65.0%
GCCTAAGACACCAAGGCCGG+AGG + chr2.2:14100417-14100436 MS.gene87295:intron 65.0%
TACCCCTGAACCGTACCGCG+GGG + chr2.2:14100364-14100383 MS.gene87295:intron 65.0%
TATCCCCCGCGGTACGGTTC+AGG - chr2.2:14100371-14100390 None:intergenic 65.0%
TGGTCGCACTCTTGGGGTGG+AGG + chr2.2:14099601-14099620 MS.gene87295:CDS 65.0%
!! CCCTCCGGCCTTGGTGTCTT+AGG - chr2.2:14100421-14100440 None:intergenic 65.0%
ACCCCTGAACCGTACCGCGG+GGG + chr2.2:14100365-14100384 MS.gene87295:intron 70.0%
GCCCGACTGTTTGTCGGGGG+AGG - chr2.2:14100399-14100418 None:intergenic 70.0%
GGGGGATATCCCCCGCGGTA+CGG - chr2.2:14100377-14100396 None:intergenic 70.0%
TCCCCCGCGGTACGGTTCAG+GGG - chr2.2:14100369-14100388 None:intergenic 70.0%
GGGAGGGGGGATATCCCCCG+CGG - chr2.2:14100382-14100401 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 14096783 14101765 14096783 ID=MS.gene87295
chr2.2 mRNA 14096783 14101765 14096783 ID=MS.gene87295.t1;Parent=MS.gene87295
chr2.2 exon 14096783 14096875 14096783 ID=MS.gene87295.t1.exon1;Parent=MS.gene87295.t1
chr2.2 CDS 14096783 14096875 14096783 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
chr2.2 exon 14097870 14097965 14097870 ID=MS.gene87295.t1.exon2;Parent=MS.gene87295.t1
chr2.2 CDS 14097870 14097965 14097870 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
chr2.2 exon 14098190 14098293 14098190 ID=MS.gene87295.t1.exon3;Parent=MS.gene87295.t1
chr2.2 CDS 14098190 14098293 14098190 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
chr2.2 exon 14098549 14098811 14098549 ID=MS.gene87295.t1.exon4;Parent=MS.gene87295.t1
chr2.2 CDS 14098549 14098811 14098549 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
chr2.2 exon 14098918 14099040 14098918 ID=MS.gene87295.t1.exon5;Parent=MS.gene87295.t1
chr2.2 CDS 14098918 14099040 14098918 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
chr2.2 exon 14099359 14099447 14099359 ID=MS.gene87295.t1.exon6;Parent=MS.gene87295.t1
chr2.2 CDS 14099359 14099447 14099359 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
chr2.2 exon 14099581 14099686 14099581 ID=MS.gene87295.t1.exon7;Parent=MS.gene87295.t1
chr2.2 CDS 14099581 14099686 14099581 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
chr2.2 exon 14099926 14100023 14099926 ID=MS.gene87295.t1.exon8;Parent=MS.gene87295.t1
chr2.2 CDS 14099926 14100023 14099926 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
chr2.2 exon 14100677 14100937 14100677 ID=MS.gene87295.t1.exon9;Parent=MS.gene87295.t1
chr2.2 CDS 14100677 14100937 14100677 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
chr2.2 exon 14101225 14101308 14101225 ID=MS.gene87295.t1.exon10;Parent=MS.gene87295.t1
chr2.2 CDS 14101225 14101308 14101225 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
chr2.2 exon 14101751 14101765 14101751 ID=MS.gene87295.t1.exon11;Parent=MS.gene87295.t1
chr2.2 CDS 14101751 14101765 14101751 ID=cds.MS.gene87295.t1;Parent=MS.gene87295.t1
Gene Sequence

>MS.gene87295

ATGTGGAGAGATCCAGGAGTTTCAGCTGATTCTTTCTATGAAACCAGACCAGATTGCAGTAATGATGTTCCCATCTCAAGATTCAAGATCAAGGTTTGTTTTTTCACTCCAAAGTTTGATTTTTATTTCTGGGTTTTTGTTATAATTTTGTTTGGTGATATAAACTGTTGTTGGGTATAGGAAGTGTATTATTGGATTGATGGAAATTGGTGTTGGTGTTTTATCAGCAATGTATGTTATGTATATATGTAGCACTGACACCTCTGATTGAAAGCCTTTTAGGTGTGCAGTGTTGATGTGTATGTGTCGTGTCCGGTGTTCATGTTTGTGTCCGTGCTTCATTGTTATGTACTAGATATGATGTTTTGTGAATGCATTTGTTCATTTACGATTACTAAAGTTTTTTTTATAAATGGTTTATCTTTATATGTGTTTCTAAGCTGTATTGAGCTTGTTAAGTTGATAAACAGGTAGAAACTTTTGTTCATTTTGAGGGGTAGATTGTGATTTCAGATAGTTGATATGTGAGGTTGAATGTGATGACAAGTATTGGCCATAGCGGATTTTTTTGACAATCTCCATGGCCAATTTGTGAAGGATGGCGGTATCCATCATGGTGTTTTATGGTGGATTTTTAGCTGTCTGCGATCCTCCGTTGATAACATTGTGTGTTAAATGGGTTGTGGAACTTTGCTAAGTTGTCAGTAATGGTTTTGTTGGCGATGCTACTTCGTTGAGGGAGAAAAATATTTTGATTTTAGTCTTTAAGATAGTGTCTTTTTTTGGTTGTTATGAATTTCAAATTCAGTCTTGTAATGTATCATTGTCATCGATGAATTTTGATTCATTGACAGTAGTTTATTGTTCAAAGTCATCGATAAAACATTAAATGACGTAAATCAATTTGACGATTTTACACCTTAACACAAAATCATTTGCATTCAGATACAGACTTCTAATTTATCTAGACTTTCAATCTCACAATGGTTGTATTTTTTTTTTATTTTTCTTAATTTTGGAAACTCGGTACAATGATTGTATATTGTTCTTTTATTTTTAACTTCTTGATTGTTATTACATGGCTCAGGCTGGTAAAACACTAAGTCCAAGAAAATGGCATGATGCATTTACTCAAGAAGGGTATCTGGATATAGGCAAGACTTTGAGACGAATCTACCGAGGGGTATTTGCTCTTATATAGTCTCTCTTTTTCAATTTGTTCAAATACTGAATATCTGAATCCTAGCTTGATGGAAAACCTGTCTGATCTTAATCATATTTTTGTTTTAATACCCTTAAAAGTATTGATGATTATGGTTTTCTTGTGTATACAAGTGTAGAAAGACAAGAATTTCTATGTTTATGTGGCTCTGTGTTAGTCGTTAATTTGTTAAAATTTCAAACCAGGGAGTCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTTTACTTGGTTGCTATGACCCGAAGAGTACATTTGACGAAAGAGATCAAATAAGAGAACGCCGAAGGTAGTCAGCTTCCATTTCATAATTGTTTCAATGTTTTAAAAACTCAACCGGACATTGAACTGACAAGACCTGTGGCTCATAGTTCAACCACTCAAACCGGAACAGAACAACAGTCAAACCACTCAAATAACCGAATAGTTGACAGCATCGGTTCACGGTTTAACTGGTTGAACTGTATGGTTCGGTCCCACCATTTCTGAATTCTAGACCTAAAAGATCATTACTTGAACTTCACTTTTATGTTTATGTCATCAGGATGCAATATGCTACATGGAAAGAAGAATGTCGCCAATTGTTTCCTCTTGTTGGAAGTGGTCGATTTATCACATCACCTGTAATTACTGATGATGGCCAACCAATTCAAGACCCCATGATTATGCCAGAAAGAAATCCAGACAAGGGATTAGCTGTACTTCCTCAAGATAATAATAGGCCTTCAAGTATAGATTCTGTAAATAATTTAGAAAATGTGACAGACAAGAAACTAATCCAGTGGATGTTAACTCTCCATCAAATAGGTTTGTGAATTTTTCTTGGGCACTATTTTGTAGTAGGATGAAATCATATCACCGTAATATAAATCACATGGTAAATGACCCTTTTTATGCACATAATACGTTTCAGGTCTTGACGTGGTTCGCACTGATAGGACATTGGTTTTTTATGAGAAACAAGAAAACTTGTCAAAATTATGGGATATTCTTGCAGTTTATGCTTGGATAGATAAAGAAGTTGGATACGGTCAAGGTGGGTTTTTACCTCTTTGAAATAGATCAGTACTATATTTAGATACTTCTATCCAACTATGATACATGTGATAATTCCATGCAAGTAGTAGTTTTTTTTTTTATTCTAATAAGAAGGAAACATGAATAAACCAAGTAAACAAATTGGAAACAAGAGAGAAGAAAACATCCACTAGATTGATATATCGAGAACTTACTCGTTTATGTATTAGTTTTACTTCCATTTTTCTTGCAACCTTGCAACAAATAATGGCAAGTTCCAAACACCATTTGCAATGTCTCTAAGCTTCTAATTTTAACAATTCACAATTCTGAACAGGAATGAGTGACCTATGCTCCCCAATGATAATTCTTCTTGATGATGAAGCAGATGCATTTTGGTGCTTTGAGCGTCTGATGCGCAGACTTGTAAACACCTTATCTCTATTATCTCTTTTATCTTTATTTCGTTTTACAAAGATAGAAAAAAGTATGTAATTCAAGTGTTCGGTTATCAGCTTTTTCACAATTTCTTATGATTCATGTTCTTGAACTTTTCAAGCGAGGAAATTTCAGATGTACTGGTCGCACTCTTGGGGTGGAGGCTCAACTAAGTAATTTGGCTTCAATTACTCAAGTAGTTGATCCAAAACTCCATAAACATATAGGTATTTTATTGCACGTGTGATTTTGTATTTATGATCAAATATAGAATCGAATTTTCTAACTCGATTTGGGTGGTTTTTACTGTGATTGTTGTTTTAAGATATGATGCCTGAAGAAATTATTAATGGAAAATGAAGTGACTAGTTTTTTTGCCATTAAAATTTGTTGAATAAAATTCCTCTTTTGTTATGTTGAAGAAATGGAAAGTAACAATTTACTGTCTTTTAATTTTGGAGAACAGAACATATTGGTGGAGGCGACTATGTATTTGCTTTTCGGATGCTTATGGTTCTGTTTCGTCGAGAATTTTCCTTTTGTGATTCATTGTACCTATGGGAGGTGTGTCTGGCTTCTTTTGTTCATTTTTTTATATATTCATTTACATTTTATTGAACAATGGATCATTGAATTGCTTTCTGCATTCGTGAATCAGATAGTTATTGATATAGTGTATAGCATCCGAATTAATGAGATAGTGTTAGAACACCAACTGGTAGCGGAAAATGAAAGAGAACGCAAATTGCAAACAATGGTACATGATCGTTTGCTTACACAGTTCGGCCGATTGTGCATACCTCTACGACTATAGAGCAGCTATAGTTCTGTAACACTTGAGTGAATTAAGATTTACAAAGTTACAAGCCATATATATATAGTACTACGGTTTACATTAGAACAATACCCCTGAACCGTACCGCGGGGGATATCCCCCCTCCCCCGACAAACAGTCGGGCCTAAGACACCAAGGCCGGAGGGAGCTTTGCTAGCTCAACTCCCCGCCCCTTGCCTCTCTTATGTGTCTATATATGAGCCATACTCAACAGATAGTTTTACGTAGTTCGCTTTCTGAAAATATGTATTATGTATGCATTGTGTGTGTTTGATGATTTTTTTCCCCCATTAAAACAGTTTATGATATAACAATATCTCAATTTTTTTGAGAATCTTTGTAAAATGATAATTGATAAATAATAGCTTGAAATTTTTAACAGATGATGTGGGCTCTAGAGTATGATCCTTATTTGTTCTTGATGTATGAAGAAGCTCAATCAGCTTCTGTAAAAGCTGAGGGCGTCAAAGGAAAAGCAAAGTCAATACGACAATGTGGAAAATACGAGAGACAAAATATGAGAAATGGAGCAAAGAATGCTGAATCTCCTCTTCCTATATCTGTTTTCCTTGTTGCTGGTGTGTTGAAAGATAAAAGTACAAAACTACTCCATGAAGCGCGAGGCTTGGATGATGTTGTCAAGGTTAGTCATGGGAGGTGACATCTAAAGCATAAGTTGCATTGAACTAGATGTAGCAATCATTGATACAGAACAAAATAATGAAATTGATGTTCCCTTTTTGGTTAACAAGCTATGTGAATTTTAATGCTACTTCATTTATTTCATTGTGACATTATTGCTTTAGACTTGAGATTTTTTTTTTTTTGAAAAAAATTGTTACATTCTTGTAACAAATTTAGCTGTCCTTTTTATGTTTGTGTTAAATTGTTTCTCCGTTCCTCTGACATCTTGCGTGTTATTGTTCTCAGATATTGAATGACACAACAGGAAATCTAGATGCCAAAAAGGCTTGCGTTGAGGCTATGAAGCTTCACAAAAAATATTTGAGAAAGGTAATGTGTTCTCTGCAACTTCTCCTTGTACAATCTTCGTATTCTCTAACAAATCTTGTTTTAGACATGTTGTAATCTCCAATACATTTATTGCAAAGTCTTAGATTGGTTACATTATATAAAACAAAAAATGTTAACTAGTGGTTAAGGTCACTTGTTAACAATATGTTTGACCATTTACCGTCACATAGATCTGTATTTCGCGTTGCATCTATCTCGACATTTACTTTCTTAAACCATATGCCATTTTTGCCAACTTATTGCTTATGACTATTATCATTTACATTGATGCATCGATGATAATTGCACTGACTAAATTATATCTAACTATGTCACTTTGTTATACACTTAAAATTTCTCAGTAGTTAGCCATATGGTACGATGTAAAACTTTCTTATTTATCTATCTGCTAAATATACAAATAAACTTTAATTGCTTGCAGGCCAAGAAAGCCTAG
Protein sequence

>MS.gene87295.t1

MWRDPGVSADSFYETRPDCSNDVPISRFKIKAGKTLSPRKWHDAFTQEGYLDIGKTLRRIYRGGVHPSIRGEVWEFLLGCYDPKSTFDERDQIRERRRMQYATWKEECRQLFPLVGSGRFITSPVITDDGQPIQDPMIMPERNPDKGLAVLPQDNNRPSSIDSVNNLENVTDKKLIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKEVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTGRTLGVEAQLSNLASITQVVDPKLHKHIEHIGGGDYVFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPYLFLMYEEAQSASVKAEGVKGKAKSIRQCGKYERQNMRNGAKNAESPLPISVFLVAGVLKDKSTKLLHEARGLDDVVKILNDTTGNLDAKKACVEAMKLHKKYLRKAKKA