Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007924.t1 | AAB99755.1 | 100 | 343 | 0 | 0 | 1 | 343 | 1 | 343 | 1.30E-184 | 655.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007924.t1 | P17783 | 83.5 | 346 | 51 | 2 | 2 | 342 | 1 | 345 | 4.6e-159 | 562.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007924.t1 | O48904 | 100.0 | 343 | 0 | 0 | 1 | 343 | 1 | 343 | 9.2e-185 | 655.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007924 | MS.gene21162 | PPI |
| MS.gene40108 | MS.gene007924 | PPI |
| MS.gene007924 | MS.gene015443 | PPI |
| MS.gene025802 | MS.gene007924 | PPI |
| MS.gene028531 | MS.gene007924 | PPI |
| MS.gene09966 | MS.gene007924 | PPI |
| MS.gene007924 | MS.gene40601 | PPI |
| MS.gene053632 | MS.gene007924 | PPI |
| MS.gene025803 | MS.gene007924 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007924.t1 | MTR_8g463760 | 99.708 | 343 | 1 | 0 | 1 | 343 | 1 | 343 | 0.0 | 688 |
| MS.gene007924.t1 | MTR_8g463760 | 99.539 | 217 | 1 | 0 | 1 | 217 | 1 | 217 | 1.17e-155 | 437 |
| MS.gene007924.t1 | MTR_5g014710 | 66.026 | 312 | 105 | 1 | 29 | 340 | 45 | 355 | 7.14e-147 | 419 |
| MS.gene007924.t1 | MTR_4g092690 | 64.103 | 312 | 111 | 1 | 29 | 340 | 43 | 353 | 5.53e-139 | 398 |
| MS.gene007924.t1 | MTR_2g021700 | 56.863 | 51 | 22 | 0 | 197 | 247 | 52 | 102 | 3.64e-11 | 61.2 |
| MS.gene007924.t1 | MTR_2g045010 | 56.863 | 51 | 22 | 0 | 197 | 247 | 52 | 102 | 3.64e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007924.t1 | AT3G15020 | 83.090 | 343 | 56 | 2 | 1 | 343 | 1 | 341 | 0.0 | 581 |
| MS.gene007924.t1 | AT1G53240 | 82.216 | 343 | 59 | 2 | 1 | 343 | 1 | 341 | 0.0 | 578 |
| MS.gene007924.t1 | AT3G15020 | 83.168 | 303 | 49 | 2 | 1 | 303 | 1 | 301 | 0.0 | 514 |
| MS.gene007924.t1 | AT2G22780 | 64.762 | 315 | 110 | 1 | 29 | 343 | 41 | 354 | 6.01e-145 | 414 |
| MS.gene007924.t1 | AT3G47520 | 59.104 | 335 | 132 | 3 | 8 | 338 | 58 | 391 | 3.41e-137 | 395 |
| MS.gene007924.t1 | AT5G09660 | 64.744 | 312 | 109 | 1 | 29 | 340 | 20 | 330 | 1.19e-132 | 382 |
| MS.gene007924.t1 | AT5G09660 | 64.744 | 312 | 109 | 1 | 29 | 340 | 41 | 351 | 2.54e-132 | 381 |
| MS.gene007924.t1 | AT5G09660 | 64.744 | 312 | 108 | 2 | 29 | 340 | 41 | 350 | 1.39e-130 | 377 |
| MS.gene007924.t1 | AT5G09660 | 66.541 | 266 | 89 | 0 | 29 | 294 | 20 | 285 | 8.19e-112 | 329 |
| MS.gene007924.t1 | AT5G09660 | 66.541 | 266 | 89 | 0 | 29 | 294 | 41 | 306 | 1.02e-111 | 329 |
Find 115 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGGGTCATTCCAGGCTTTC+TGG | 0.174211 | 8.3:-46540308 | None:intergenic |
| GCTTGCCTCAAAGGTCTTAA+TGG | 0.290402 | 8.3:+46541832 | MS.gene007924:CDS |
| TTACAACTCTTGATGTAGTT+AGG | 0.320658 | 8.3:+46541028 | MS.gene007924:CDS |
| TACGATGAGAAGAGATTGTT+TGG | 0.326956 | 8.3:+46541003 | MS.gene007924:CDS |
| GAGGCAAGCATCAGCAAATA+TGG | 0.328154 | 8.3:-46541818 | None:intergenic |
| GAATGGTGTAGAAGAAATTC+TGG | 0.329174 | 8.3:+46542141 | MS.gene007924:CDS |
| TCTGGATGATGATGTCATTA+AGG | 0.345680 | 8.3:+46541543 | MS.gene007924:CDS |
| CTTTCTCTTTATGATATTGC+TGG | 0.358856 | 8.3:+46539098 | MS.gene007924:CDS |
| GAACGCAAGGTGGCCATTCT+CGG | 0.375746 | 8.3:+46539011 | MS.gene007924:CDS |
| AAAGCTAATGTTCCAGTTGC+AGG | 0.376795 | 8.3:+46541072 | MS.gene007924:CDS |
| GGCATCACCTCAAGCCAATC+TGG | 0.378853 | 8.3:+46541525 | MS.gene007924:intron |
| CATGTTTCTTGCAGTTATGC+TGG | 0.385172 | 8.3:+46541793 | MS.gene007924:intron |
| AGATCATCACGGGTCATTCC+AGG | 0.388038 | 8.3:-46540316 | None:intergenic |
| AAACTTTACATACCTGCAAC+TGG | 0.394486 | 8.3:-46541084 | None:intergenic |
| TGCGGAACCCTTTCCAGCCT+TGG | 0.405924 | 8.3:-46541611 | None:intergenic |
| GCCGGTGTGCCCAGAAAGCC+TGG | 0.406798 | 8.3:+46540298 | MS.gene007924:CDS |
| AGGAAGTTCAGCAATGAGAT+TGG | 0.408221 | 8.3:-46541890 | None:intergenic |
| ATAATTTACAGGTGAGGATT+GGG | 0.409075 | 8.3:+46542116 | MS.gene007924:intron |
| CTCGGTGCCGCCGGTGGGAT+CGG | 0.412931 | 8.3:+46539029 | MS.gene007924:CDS |
| AATAATTTACAGGTGAGGAT+TGG | 0.413716 | 8.3:+46542115 | MS.gene007924:intron |
| CGGGTCATTCCAGGCTTTCT+GGG | 0.413777 | 8.3:-46540307 | None:intergenic |
| CCTGCATGGCCTCCTATAAC+AGG | 0.414819 | 8.3:-46541372 | None:intergenic |
| AGATGAGCTTGGAAAAGCTT+TGG | 0.416154 | 8.3:+46540249 | MS.gene007924:CDS |
| GGCTTTCTGGGCACACCGGC+AGG | 0.417036 | 8.3:-46540295 | None:intergenic |
| TTGAAAACCTCAGCAGCAAT+GGG | 0.424506 | 8.3:-46540967 | None:intergenic |
| GCGGGACACGGCTGACTTGA+CGG | 0.426923 | 8.3:-46538949 | None:intergenic |
| TACGAGCACTCAACAACATC+TGG | 0.433263 | 8.3:-46541859 | None:intergenic |
| CAGCAATATCATAAAGAGAA+AGG | 0.433801 | 8.3:-46539097 | None:intergenic |
| ACGATGAGAAGAGATTGTTT+GGG | 0.435161 | 8.3:+46541004 | MS.gene007924:CDS |
| AACTGTCCCCATTGCTGCTG+AGG | 0.435457 | 8.3:+46540960 | MS.gene007924:CDS |
| TATGATATTGCTGGTACCCC+TGG | 0.437304 | 8.3:+46539107 | MS.gene007924:CDS |
| GCCATTCTCGGTGCCGCCGG+TGG | 0.439694 | 8.3:+46539023 | MS.gene007924:CDS |
| GCCACCTTGCGTTCAGGCAC+CGG | 0.443147 | 8.3:-46539002 | None:intergenic |
| GAGGTCAATGTACCTGTTAT+AGG | 0.443809 | 8.3:+46541360 | MS.gene007924:intron |
| CAGGTGAGGATTGGGAAGAA+TGG | 0.448697 | 8.3:+46542124 | MS.gene007924:intron |
| AGAATGGCCACCTTGCGTTC+AGG | 0.453035 | 8.3:-46539008 | None:intergenic |
| ACTTCCTTTCTTTGCTTCCA+AGG | 0.457724 | 8.3:+46541906 | MS.gene007924:CDS |
| TGAAAAGGGTACCTGAGATC+TGG | 0.463834 | 8.3:-46539159 | None:intergenic |
| TTTGCTGATGCTTGCCTCAA+AGG | 0.464611 | 8.3:+46541823 | MS.gene007924:CDS |
| CCCACCGGCGGCACCGAGAA+TGG | 0.465990 | 8.3:-46539024 | None:intergenic |
| AGCAATATCATAAAGAGAAA+GGG | 0.469702 | 8.3:-46539096 | None:intergenic |
| TACAACTCTTGATGTAGTTA+GGG | 0.471552 | 8.3:+46541029 | MS.gene007924:CDS |
| CTTGAAAACCTCAGCAGCAA+TGG | 0.481837 | 8.3:-46540968 | None:intergenic |
| GTGGCCATTCTCGGTGCCGC+CGG | 0.486479 | 8.3:+46539020 | MS.gene007924:CDS |
| AATGACATCATCATCCAGAT+TGG | 0.486665 | 8.3:-46541539 | None:intergenic |
| CTAACATCGGCAGCAACACC+AGG | 0.490641 | 8.3:-46539125 | None:intergenic |
| GGGTTCCGCAACTTTGTCAA+TGG | 0.490990 | 8.3:+46541624 | MS.gene007924:CDS |
| CCGTGGCTATGCCACCGAAC+CGG | 0.491267 | 8.3:+46538983 | MS.gene007924:CDS |
| GGAATTACCTGAGAAAATAG+TGG | 0.493703 | 8.3:-46541408 | None:intergenic |
| GAACTCCATTAAGACCTTTG+AGG | 0.494787 | 8.3:-46541837 | None:intergenic |
| GAGGTTGTGACTGCCAAGGC+TGG | 0.496598 | 8.3:+46541598 | MS.gene007924:CDS |
| GCGGGTTATGCTGCGGGACA+CGG | 0.500052 | 8.3:-46538961 | None:intergenic |
| CCATTCTCGGTGCCGCCGGT+GGG | 0.500262 | 8.3:+46539024 | MS.gene007924:CDS |
| GTAGAAGAAATTCTGGGCCT+AGG | 0.501879 | 8.3:+46542148 | MS.gene007924:CDS |
| GGCAAGTGATTTAACAATGC+CGG | 0.502226 | 8.3:-46540353 | None:intergenic |
| GTATGACATGTTCGATTACT+GGG | 0.508568 | 8.3:-46542257 | None:intergenic |
| ATGGGGACAGTTGAGTTCAC+AGG | 0.511862 | 8.3:-46540949 | None:intergenic |
| TGTGACTGCCAAGGCTGGAA+AGG | 0.512626 | 8.3:+46541603 | MS.gene007924:CDS |
| CTTGCGTTCAGGCACCGGTT+CGG | 0.514972 | 8.3:-46538997 | None:intergenic |
| CCTGTTATAGGAGGCCATGC+AGG | 0.522625 | 8.3:+46541372 | MS.gene007924:CDS |
| TGAGCTTGGAAAAGCTTTGG+AGG | 0.525617 | 8.3:+46540252 | MS.gene007924:CDS |
| CCACATCAACTCCAGATCTC+AGG | 0.529181 | 8.3:+46539148 | MS.gene007924:CDS |
| TTCGGTGGCATAGCCACGGC+GGG | 0.536741 | 8.3:-46538979 | None:intergenic |
| TCCAGGCTTTCTGGGCACAC+CGG | 0.542175 | 8.3:-46540299 | None:intergenic |
| GCCACGGCGGGTTATGCTGC+GGG | 0.544063 | 8.3:-46538967 | None:intergenic |
| ATCACCTTGGAAGCAAAGAA+AGG | 0.544474 | 8.3:-46541910 | None:intergenic |
| AGCCACGGCGGGTTATGCTG+CGG | 0.546095 | 8.3:-46538968 | None:intergenic |
| CTTAAGTCATCTATTGAGAA+GGG | 0.549740 | 8.3:+46542220 | MS.gene007924:CDS |
| AATGGTGTAGAAGAAATTCT+GGG | 0.552614 | 8.3:+46542142 | MS.gene007924:CDS |
| ATGACTTAAGTTCAGACTTG+AGG | 0.553442 | 8.3:-46542207 | None:intergenic |
| GTGACTGCCAAGGCTGGAAA+GGG | 0.554401 | 8.3:+46541604 | MS.gene007924:CDS |
| GAGTATCGACGGCCTCATCA+TGG | 0.558205 | 8.3:-46538922 | None:intergenic |
| GACGTTGTTATAATTCCTGC+CGG | 0.559503 | 8.3:+46540280 | MS.gene007924:CDS |
| AGAGAAAGGGTTGAAACGAG+AGG | 0.568229 | 8.3:-46539083 | None:intergenic |
| GCGTTCAGGCACCGGTTCGG+TGG | 0.571728 | 8.3:-46538994 | None:intergenic |
| GGTTGCTTATCATGTTAACA+AGG | 0.574352 | 8.3:-46540927 | None:intergenic |
| ACTTAAGTCATCTATTGAGA+AGG | 0.574569 | 8.3:+46542219 | MS.gene007924:CDS |
| AATGTTGAAAAGATCATCAC+GGG | 0.575108 | 8.3:-46540326 | None:intergenic |
| TACGCAGGTGAAGATGAGCT+TGG | 0.576220 | 8.3:+46540238 | MS.gene007924:CDS |
| CTAACAGCGAGGACACAAGA+TGG | 0.588495 | 8.3:+46541568 | MS.gene007924:CDS |
| CCGGTTCGGTGGCATAGCCA+CGG | 0.591903 | 8.3:-46538983 | None:intergenic |
| CCTGAGATCTGGAGTTGATG+TGG | 0.592045 | 8.3:-46539148 | None:intergenic |
| CGATGAGAAGAGATTGTTTG+GGG | 0.592539 | 8.3:+46541005 | MS.gene007924:CDS |
| GAGCTTCATGAGAAGAGAGA+GGG | 0.595659 | 8.3:-46539057 | None:intergenic |
| CGAACCGGTGCCTGAACGCA+AGG | 0.598930 | 8.3:+46538998 | MS.gene007924:CDS |
| GAGGGGCTGACCGATCCCAC+CGG | 0.599708 | 8.3:-46539039 | None:intergenic |
| ATCTCGAAGCATCCATGATG+AGG | 0.608911 | 8.3:+46538910 | None:intergenic |
| GAATTACCTGAGAAAATAGT+GGG | 0.610521 | 8.3:-46541407 | None:intergenic |
| GAGCTTGGAAAAGCTTTGGA+GGG | 0.610948 | 8.3:+46540253 | MS.gene007924:CDS |
| AGCTTCATGAGAAGAGAGAG+GGG | 0.613026 | 8.3:-46539056 | None:intergenic |
| GTCAATGTACCTGTTATAGG+AGG | 0.620105 | 8.3:+46541363 | MS.gene007924:CDS |
| GGAGTTGATGTGGCTAACAT+CGG | 0.621832 | 8.3:-46539138 | None:intergenic |
| TAATGTTGAAAAGATCATCA+CGG | 0.630256 | 8.3:-46540327 | None:intergenic |
| GGAGAATAGTAACTCCTGCA+TGG | 0.631392 | 8.3:-46541386 | None:intergenic |
| ATGCAGGTAACTGGGTACGC+AGG | 0.635967 | 8.3:+46540223 | MS.gene007924:intron |
| TGGGGACAGTTGAGTTCACA+GGG | 0.637936 | 8.3:-46540948 | None:intergenic |
| TTACGCCATTGACAAAGTTG+CGG | 0.643353 | 8.3:-46541629 | None:intergenic |
| TGAGCTTCATGAGAAGAGAG+AGG | 0.649994 | 8.3:-46539058 | None:intergenic |
| ACCGGTGCCTGAACGCAAGG+TGG | 0.650432 | 8.3:+46539001 | MS.gene007924:CDS |
| TCCCGCAGCATAACCCGCCG+TGG | 0.650564 | 8.3:+46538966 | MS.gene007924:CDS |
| TTGACGGATCTGAGTATCGA+CGG | 0.652201 | 8.3:-46538933 | None:intergenic |
| GTTGCTTATCATGTTAACAA+GGG | 0.652641 | 8.3:-46540926 | None:intergenic |
| CAAAATCTGAGAGAGAACCT+AGG | 0.656711 | 8.3:-46542165 | None:intergenic |
| AACAGAGGTTGTGACTGCCA+AGG | 0.658548 | 8.3:+46541594 | MS.gene007924:CDS |
| TCATCATCCAGATTGGCTTG+AGG | 0.669069 | 8.3:-46541532 | None:intergenic |
| TAACATCGGCAGCAACACCA+GGG | 0.676039 | 8.3:-46539124 | None:intergenic |
| GACACAAGATGGAGGAACAG+AGG | 0.678547 | 8.3:+46541579 | MS.gene007924:CDS |
| GTTCGGTGGCATAGCCACGG+CGG | 0.681583 | 8.3:-46538980 | None:intergenic |
| GGGCTGACCGATCCCACCGG+CGG | 0.696199 | 8.3:-46539036 | None:intergenic |
| ACAGCGAGGACACAAGATGG+AGG | 0.698386 | 8.3:+46541571 | MS.gene007924:CDS |
| GCAGTACTTAGAAATAGCAG+TGG | 0.701234 | 8.3:-46540374 | None:intergenic |
| TGAAAACCTCAGCAGCAATG+GGG | 0.722319 | 8.3:-46540966 | None:intergenic |
| AACATCGGCAGCAACACCAG+GGG | 0.724695 | 8.3:-46539123 | None:intergenic |
| TGACATGTTCGATTACTGGG+AGG | 0.743122 | 8.3:-46542254 | None:intergenic |
| TCATTAAGGCTCTAACAGCG+AGG | 0.747513 | 8.3:+46541557 | MS.gene007924:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACAAATTTTTTTTTATAG+GGG | + | chr8.3:46539881-46539900 | MS.gene007924:intron | 10.0% |
| !!! | AATCTAAACAATTATTTTAA+GGG | - | chr8.3:46539668-46539687 | None:intergenic | 10.0% |
| !!! | CTAAACAAATTTTTTTTTAT+AGG | + | chr8.3:46539879-46539898 | MS.gene007924:intron | 10.0% |
| !! | AAACTAAACTAAAAAAATCA+CGG | - | chr8.3:46540147-46540166 | None:intergenic | 15.0% |
| !! | CAAAAAATCTTCAAATTATA+GGG | + | chr8.3:46539849-46539868 | MS.gene007924:intron | 15.0% |
| !! | GCATGATTTATTTATTATTA+TGG | + | chr8.3:46539988-46540007 | MS.gene007924:intron | 15.0% |
| !!! | AACAAATTTTTTTTTATAGG+GGG | + | chr8.3:46539882-46539901 | MS.gene007924:intron | 15.0% |
| !!! | ATCTAAACAATTATTTTAAG+GGG | - | chr8.3:46539667-46539686 | None:intergenic | 15.0% |
| !!! | GAATCTAAACAATTATTTTA+AGG | - | chr8.3:46539669-46539688 | None:intergenic | 15.0% |
| !!! | TTTGTTGTATTTTAATGTTA+TGG | + | chr8.3:46539581-46539600 | MS.gene007924:intron | 15.0% |
| !! | AAACTGTTGAAATAATTTAC+AGG | + | chr8.3:46542105-46542124 | MS.gene007924:intron | 20.0% |
| !! | ACAACAAGTTAAAAGAAAAT+AGG | - | chr8.3:46542027-46542046 | None:intergenic | 20.0% |
| !! | ATCAAACTAAATCCAATAAA+AGG | - | chr8.3:46540043-46540062 | None:intergenic | 20.0% |
| !! | ATGATGAATCTTAATTTCAA+AGG | + | chr8.3:46539216-46539235 | MS.gene007924:intron | 20.0% |
| !! | ATGTTATGGTAATTAACATT+TGG | + | chr8.3:46539595-46539614 | MS.gene007924:intron | 20.0% |
| !! | CAATAATACTAATAATTGAG+TGG | + | chr8.3:46540685-46540704 | MS.gene007924:intron | 20.0% |
| !! | CACTCAATTATTAGTATTAT+TGG | - | chr8.3:46540687-46540706 | None:intergenic | 20.0% |
| !! | CCAAAAAATCTTCAAATTAT+AGG | + | chr8.3:46539848-46539867 | MS.gene007924:intron | 20.0% |
| !! | CTAAGTACTTCTTTAAATAT+GGG | + | chr8.3:46540897-46540916 | MS.gene007924:intron | 20.0% |
| !! | CTGTAATTTAAAGATTCTTT+GGG | + | chr8.3:46539693-46539712 | MS.gene007924:intron | 20.0% |
| !! | GAAATTCTTTCAAATTACAA+CGG | - | chr8.3:46539765-46539784 | None:intergenic | 20.0% |
| !! | GTTGTAATTTGAAAGAATTT+CGG | + | chr8.3:46539764-46539783 | MS.gene007924:intron | 20.0% |
| !! | TCAAACTAAATCCAATAAAA+GGG | - | chr8.3:46540042-46540061 | None:intergenic | 20.0% |
| !! | TGAGTAAATTTCATTAGAAT+TGG | + | chr8.3:46540543-46540562 | MS.gene007924:intron | 20.0% |
| !! | TGTTATGGTAATTAACATTT+GGG | + | chr8.3:46539596-46539615 | MS.gene007924:intron | 20.0% |
| !! | TTCAATGTAATCATATATGT+TGG | - | chr8.3:46539454-46539473 | None:intergenic | 20.0% |
| !!! | ATTTAAAACCAAAATTGGAA+AGG | - | chr8.3:46540205-46540224 | None:intergenic | 20.0% |
| !!! | CCTATAATTTGAAGATTTTT+TGG | - | chr8.3:46539851-46539870 | None:intergenic | 20.0% |
| !!! | GTTTCTATTTTTACTTCTAA+TGG | + | chr8.3:46541962-46541981 | MS.gene007924:intron | 20.0% |
| !!! | TTTTTACTTCTAATGGTTTA+AGG | + | chr8.3:46541969-46541988 | MS.gene007924:intron | 20.0% |
| !!! | TTTTTTTTCCTTTCCAATTT+TGG | + | chr8.3:46540194-46540213 | MS.gene007924:intron | 20.0% |
| ! | AAACTTATGAAACATGGATA+TGG | - | chr8.3:46539544-46539563 | None:intergenic | 25.0% |
| ! | AAATCTTCAAATTATAGGGT+TGG | + | chr8.3:46539853-46539872 | MS.gene007924:intron | 25.0% |
| ! | AAATTTACTCATTTCCTTCA+TGG | - | chr8.3:46540534-46540553 | None:intergenic | 25.0% |
| ! | AGAATCTTTAAATTACAGGT+TGG | - | chr8.3:46539691-46539710 | None:intergenic | 25.0% |
| ! | AGCAATATCATAAAGAGAAA+GGG | - | chr8.3:46539099-46539118 | None:intergenic | 25.0% |
| ! | ATAATTGAGTGGCATATTAT+TGG | + | chr8.3:46540696-46540715 | MS.gene007924:intron | 25.0% |
| ! | ATACGAAAGAATAAAACAAC+TGG | - | chr8.3:46542080-46542099 | None:intergenic | 25.0% |
| ! | ATATCACGCTTAAATATAGA+AGG | - | chr8.3:46540828-46540847 | None:intergenic | 25.0% |
| ! | CCAAAGAATCTTTAAATTAC+AGG | - | chr8.3:46539695-46539714 | None:intergenic | 25.0% |
| ! | CCTGTAATTTAAAGATTCTT+TGG | + | chr8.3:46539692-46539711 | MS.gene007924:intron | 25.0% |
| ! | GCTAAGTACTTCTTTAAATA+TGG | + | chr8.3:46540896-46540915 | MS.gene007924:intron | 25.0% |
| ! | TAATAAAAATACGCATGAGA+TGG | - | chr8.3:46539327-46539346 | None:intergenic | 25.0% |
| ! | TAATGTTGAAAAGATCATCA+CGG | - | chr8.3:46540330-46540349 | None:intergenic | 25.0% |
| ! | TCGTTAAAACTTATGAAACA+TGG | - | chr8.3:46539550-46539569 | None:intergenic | 25.0% |
| ! | TTACAATTAACCAGTGAAAA+GGG | - | chr8.3:46539176-46539195 | None:intergenic | 25.0% |
| ! | TTTACAATTAACCAGTGAAA+AGG | - | chr8.3:46539177-46539196 | None:intergenic | 25.0% |
| ! | TTTGTAATTTGATGTCATGA+AGG | - | chr8.3:46539725-46539744 | None:intergenic | 25.0% |
| !! | AGGATTTGAGATTTATAAGT+TGG | + | chr8.3:46540743-46540762 | MS.gene007924:intron | 25.0% |
| !! | ATTTAAAGATTCTTTGGGTT+TGG | + | chr8.3:46539698-46539717 | MS.gene007924:intron | 25.0% |
| !! | CAATTCAGTGATGTTTATTT+TGG | + | chr8.3:46540469-46540488 | MS.gene007924:intron | 25.0% |
| !! | TTGTAATTGCATGAAGATTT+TGG | + | chr8.3:46541277-46541296 | MS.gene007924:intron | 25.0% |
| !! | TTTACATCCATTAAAAGTGT+AGG | + | chr8.3:46540723-46540742 | MS.gene007924:intron | 25.0% |
| !!! | AATTATTTTAAGGGGTACAT+CGG | - | chr8.3:46539659-46539678 | None:intergenic | 25.0% |
| !!! | ATCATATCATCGATTTTGTA+CGG | + | chr8.3:46539802-46539821 | MS.gene007924:intron | 25.0% |
| !!! | CATTTGATTTTAGAACAAGA+AGG | + | chr8.3:46540014-46540033 | MS.gene007924:intron | 25.0% |
| AAAATGCCAAGTTAAAAAGC+AGG | - | chr8.3:46541433-46541452 | None:intergenic | 30.0% | |
| AAACATGAGGATTTGAGTAT+TGG | + | chr8.3:46541164-46541183 | MS.gene007924:intron | 30.0% | |
| AAATGCCAAGTTAAAAAGCA+GGG | - | chr8.3:46541432-46541451 | None:intergenic | 30.0% | |
| AATAATTTACAGGTGAGGAT+TGG | + | chr8.3:46542115-46542134 | MS.gene007924:intron | 30.0% | |
| AATGGTGTAGAAGAAATTCT+GGG | + | chr8.3:46542142-46542161 | MS.gene007924:CDS | 30.0% | |
| AATGTTGAAAAGATCATCAC+GGG | - | chr8.3:46540329-46540348 | None:intergenic | 30.0% | |
| ACTACAAGAATTATGATTCC+TGG | + | chr8.3:46541736-46541755 | MS.gene007924:intron | 30.0% | |
| ACTTAAGTCATCTATTGAGA+AGG | + | chr8.3:46542219-46542238 | MS.gene007924:CDS | 30.0% | |
| ACTTCTTTAAATATGGGATC+AGG | + | chr8.3:46540903-46540922 | MS.gene007924:intron | 30.0% | |
| AGTTATGTTCGACTTTCTTT+GGG | - | chr8.3:46541212-46541231 | None:intergenic | 30.0% | |
| ATAATTTACAGGTGAGGATT+GGG | + | chr8.3:46542116-46542135 | MS.gene007924:intron | 30.0% | |
| ATCGATGATATGATATGACA+TGG | - | chr8.3:46539796-46539815 | None:intergenic | 30.0% | |
| CAGCAATATCATAAAGAGAA+AGG | - | chr8.3:46539100-46539119 | None:intergenic | 30.0% | |
| CTACAAGAATTATGATTCCT+GGG | + | chr8.3:46541737-46541756 | MS.gene007924:intron | 30.0% | |
| CTTAAGTCATCTATTGAGAA+GGG | + | chr8.3:46542220-46542239 | MS.gene007924:CDS | 30.0% | |
| CTTTCTCTTTATGATATTGC+TGG | + | chr8.3:46539098-46539117 | MS.gene007924:CDS | 30.0% | |
| GAATTACCTGAGAAAATAGT+GGG | - | chr8.3:46541410-46541429 | None:intergenic | 30.0% | |
| GTTGAAATAATTTACAGGTG+AGG | + | chr8.3:46542110-46542129 | MS.gene007924:intron | 30.0% | |
| GTTGCTTATCATGTTAACAA+GGG | - | chr8.3:46540929-46540948 | None:intergenic | 30.0% | |
| TACAACTCTTGATGTAGTTA+GGG | + | chr8.3:46541029-46541048 | MS.gene007924:CDS | 30.0% | |
| TCGATGATATGATATGACAT+GGG | - | chr8.3:46539795-46539814 | None:intergenic | 30.0% | |
| TGATGTTGTATCACAACAAT+GGG | + | chr8.3:46540059-46540078 | MS.gene007924:intron | 30.0% | |
| TTACAACTCTTGATGTAGTT+AGG | + | chr8.3:46541028-46541047 | MS.gene007924:CDS | 30.0% | |
| TTGATGTTGTATCACAACAA+TGG | + | chr8.3:46540058-46540077 | MS.gene007924:intron | 30.0% | |
| TTTACCTCCCTGTAATATTA+GGG | - | chr8.3:46539920-46539939 | None:intergenic | 30.0% | |
| TTTCTTAGTTAAAGTTACCC+TGG | + | chr8.3:46540582-46540601 | MS.gene007924:intron | 30.0% | |
| ! | CCTGCATTTAAAACCAAAAT+TGG | - | chr8.3:46540210-46540229 | None:intergenic | 30.0% |
| ! | CGTACTTCTAACATGTATTT+TGG | + | chr8.3:46541453-46541472 | MS.gene007924:intron | 30.0% |
| ! | CTCAAATCCTACACTTTTAA+TGG | - | chr8.3:46540733-46540752 | None:intergenic | 30.0% |
| ! | TCTAAAATTATCAGCTGTGT+TGG | + | chr8.3:46539485-46539504 | MS.gene007924:intron | 30.0% |
| !! | AACATTTGATTTTTCTGCAG+AGG | + | chr8.3:46541341-46541360 | MS.gene007924:intron | 30.0% |
| !! | ACTTGTTGTGTTCATAGAAA+CGG | + | chr8.3:46542038-46542057 | MS.gene007924:intron | 30.0% |
| !!! | CCAATTTTGGTTTTAAATGC+AGG | + | chr8.3:46540207-46540226 | MS.gene007924:intron | 30.0% |
| !!! | TAACCCTTAACCTTTTTTGT+GGG | + | chr8.3:46539947-46539966 | MS.gene007924:intron | 30.0% |
| !!! | TAATTCCCTGCTTTTTAACT+TGG | + | chr8.3:46541424-46541443 | MS.gene007924:intron | 30.0% |
| !!! | TTAACCCTTAACCTTTTTTG+TGG | + | chr8.3:46539946-46539965 | MS.gene007924:intron | 30.0% |
| !!! | TTTTTTTATAGGGGGTAAAC+CGG | + | chr8.3:46539890-46539909 | MS.gene007924:intron | 30.0% |
| AAACTTTACATACCTGCAAC+TGG | - | chr8.3:46541087-46541106 | None:intergenic | 35.0% | |
| AAATCCCTAATATTACAGGG+AGG | + | chr8.3:46539913-46539932 | MS.gene007924:intron | 35.0% | |
| AATGACATCATCATCCAGAT+TGG | - | chr8.3:46541542-46541561 | None:intergenic | 35.0% | |
| ACGATGAGAAGAGATTGTTT+GGG | + | chr8.3:46541004-46541023 | MS.gene007924:CDS | 35.0% | |
| ATGACTTAAGTTCAGACTTG+AGG | - | chr8.3:46542210-46542229 | None:intergenic | 35.0% | |
| ATTAACTATACTGTCCAGTC+CGG | - | chr8.3:46541678-46541697 | None:intergenic | 35.0% | |
| CAGTTATGTTCGACTTTCTT+TGG | - | chr8.3:46541213-46541232 | None:intergenic | 35.0% | |
| CCTGTAATATTAGGGATTTC+CGG | - | chr8.3:46539912-46539931 | None:intergenic | 35.0% | |
| CGAAAGAATAAAACAACTGG+TGG | - | chr8.3:46542077-46542096 | None:intergenic | 35.0% | |
| CGGAAATCCCTAATATTACA+GGG | + | chr8.3:46539910-46539929 | MS.gene007924:intron | 35.0% | |
| GAATGGTGTAGAAGAAATTC+TGG | + | chr8.3:46542141-46542160 | MS.gene007924:CDS | 35.0% | |
| GGAATTACCTGAGAAAATAG+TGG | - | chr8.3:46541411-46541430 | None:intergenic | 35.0% | |
| GGTTGCTTATCATGTTAACA+AGG | - | chr8.3:46540930-46540949 | None:intergenic | 35.0% | |
| GTTTACCTCCCTGTAATATT+AGG | - | chr8.3:46539921-46539940 | None:intergenic | 35.0% | |
| TACCCCACAAAAAAGGTTAA+GGG | - | chr8.3:46539953-46539972 | None:intergenic | 35.0% | |
| TACGATGAGAAGAGATTGTT+TGG | + | chr8.3:46541003-46541022 | MS.gene007924:CDS | 35.0% | |
| TGGTTTAGACATGTTGATAC+CGG | + | chr8.3:46541656-46541675 | MS.gene007924:intron | 35.0% | |
| TGTACGGTCAAAATTCATGA+AGG | + | chr8.3:46539818-46539837 | MS.gene007924:intron | 35.0% | |
| TGTGAGAGATCGGAATTAAT+CGG | + | chr8.3:46539275-46539294 | MS.gene007924:intron | 35.0% | |
| ! | GATCTTTTCAACATTAACGC+CGG | + | chr8.3:46540334-46540353 | MS.gene007924:CDS | 35.0% |
| ! | TATTCTCCCACTATTTTCTC+AGG | + | chr8.3:46541401-46541420 | MS.gene007924:CDS | 35.0% |
| ! | TCTGGATGATGATGTCATTA+AGG | + | chr8.3:46541543-46541562 | MS.gene007924:CDS | 35.0% |
| !! | ACTTTACTGGTGCTGTTTAT+TGG | + | chr8.3:46539244-46539263 | MS.gene007924:intron | 35.0% |
| !! | CTCTCAGATTTTGAGAAACA+AGG | + | chr8.3:46542175-46542194 | MS.gene007924:CDS | 35.0% |
| !! | CTTTACTGGTGCTGTTTATT+GGG | + | chr8.3:46539245-46539264 | MS.gene007924:intron | 35.0% |
| !! | GTTCATTCTCTTGTTGTTTG+AGG | + | chr8.3:46541991-46542010 | MS.gene007924:intron | 35.0% |
| !! | TTCAAAGGTGCTAACTTTAC+TGG | + | chr8.3:46539231-46539250 | MS.gene007924:intron | 35.0% |
| !! | TTGTTGTTTGAGGATGCATA+GGG | + | chr8.3:46542001-46542020 | MS.gene007924:intron | 35.0% |
| !!! | AACCCTTAACCTTTTTTGTG+GGG | + | chr8.3:46539948-46539967 | MS.gene007924:intron | 35.0% |
| !!! | ACAAGAAGGTACCCTTTTAT+TGG | + | chr8.3:46540028-46540047 | MS.gene007924:intron | 35.0% |
| !!! | GGTTTTAAATGCAGGTAACT+GGG | + | chr8.3:46540215-46540234 | MS.gene007924:intron | 35.0% |
| !!! | TGGTTTTAAATGCAGGTAAC+TGG | + | chr8.3:46540214-46540233 | MS.gene007924:intron | 35.0% |
| !!! | TGTTTTTTCTCGAGTGAGAA+CGG | + | chr8.3:46541236-46541255 | MS.gene007924:intron | 35.0% |
| AAAAATCACGGCATTGCAGA+AGG | - | chr8.3:46540135-46540154 | None:intergenic | 40.0% | |
| AAAATCACGGCATTGCAGAA+GGG | - | chr8.3:46540134-46540153 | None:intergenic | 40.0% | |
| AAAGCTAATGTTCCAGTTGC+AGG | + | chr8.3:46541072-46541091 | MS.gene007924:CDS | 40.0% | |
| AACGAAAACAGAGACTCACA+TGG | - | chr8.3:46540402-46540421 | None:intergenic | 40.0% | |
| AATCCTCATGTTTCGTCTCA+AGG | - | chr8.3:46541157-46541176 | None:intergenic | 40.0% | |
| ACGAAAACAGAGACTCACAT+GGG | - | chr8.3:46540401-46540420 | None:intergenic | 40.0% | |
| ACTTCCTTTCTTTGCTTCCA+AGG | + | chr8.3:46541906-46541925 | MS.gene007924:CDS | 40.0% | |
| AGATGAGCTTGGAAAAGCTT+TGG | + | chr8.3:46540249-46540268 | MS.gene007924:CDS | 40.0% | |
| AGGAAGTTCAGCAATGAGAT+TGG | - | chr8.3:46541893-46541912 | None:intergenic | 40.0% | |
| AGGGCAAAAACTTTCTATGC+TGG | + | chr8.3:46541048-46541067 | MS.gene007924:CDS | 40.0% | |
| AGTTCACTACCCCACAAAAA+AGG | - | chr8.3:46539960-46539979 | None:intergenic | 40.0% | |
| ATCACCTTGGAAGCAAAGAA+AGG | - | chr8.3:46541913-46541932 | None:intergenic | 40.0% | |
| CAAAATCTGAGAGAGAACCT+AGG | - | chr8.3:46542168-46542187 | None:intergenic | 40.0% | |
| CATGTTTCTTGCAGTTATGC+TGG | + | chr8.3:46541793-46541812 | MS.gene007924:intron | 40.0% | |
| CCGGAAATCCCTAATATTAC+AGG | + | chr8.3:46539909-46539928 | MS.gene007924:intron | 40.0% | |
| CCTACAAGAGAACAGTTAAG+GGG | - | chr8.3:46541507-46541526 | None:intergenic | 40.0% | |
| CGATGAGAAGAGATTGTTTG+GGG | + | chr8.3:46541005-46541024 | MS.gene007924:CDS | 40.0% | |
| CGGAAATCGCTCATATTACA+GGG | - | chr8.3:46539639-46539658 | None:intergenic | 40.0% | |
| CTACCCCACAAAAAAGGTTA+AGG | - | chr8.3:46539954-46539973 | None:intergenic | 40.0% | |
| GAAATCGCTCATATTACAGG+GGG | - | chr8.3:46539637-46539656 | None:intergenic | 40.0% | |
| GAACTCCATTAAGACCTTTG+AGG | - | chr8.3:46541840-46541859 | None:intergenic | 40.0% | |
| GACGTTGTTATAATTCCTGC+CGG | + | chr8.3:46540280-46540299 | MS.gene007924:CDS | 40.0% | |
| GAGGTCAATGTACCTGTTAT+AGG | + | chr8.3:46541360-46541379 | MS.gene007924:intron | 40.0% | |
| GCAGTACTTAGAAATAGCAG+TGG | - | chr8.3:46540377-46540396 | None:intergenic | 40.0% | |
| GCCTACAAGAGAACAGTTAA+GGG | - | chr8.3:46541508-46541527 | None:intergenic | 40.0% | |
| GGAAATCGCTCATATTACAG+GGG | - | chr8.3:46539638-46539657 | None:intergenic | 40.0% | |
| GGCAAGTGATTTAACAATGC+CGG | - | chr8.3:46540356-46540375 | None:intergenic | 40.0% | |
| GGGCAAAAACTTTCTATGCT+GGG | + | chr8.3:46541049-46541068 | MS.gene007924:CDS | 40.0% | |
| GGGTTATTCTTGTGAGAGAT+CGG | + | chr8.3:46539265-46539284 | MS.gene007924:intron | 40.0% | |
| GTCAATGTACCTGTTATAGG+AGG | + | chr8.3:46541363-46541382 | MS.gene007924:CDS | 40.0% | |
| TCGGAAATCGCTCATATTAC+AGG | - | chr8.3:46539640-46539659 | None:intergenic | 40.0% | |
| TGCCTACAAGAGAACAGTTA+AGG | - | chr8.3:46541509-46541528 | None:intergenic | 40.0% | |
| TTACGCCATTGACAAAGTTG+CGG | - | chr8.3:46541632-46541651 | None:intergenic | 40.0% | |
| TTGAAAACCTCAGCAGCAAT+GGG | - | chr8.3:46540970-46540989 | None:intergenic | 40.0% | |
| TTTCCTTGAGACGAAACATG+AGG | + | chr8.3:46541151-46541170 | MS.gene007924:intron | 40.0% | |
| TTTGTCAATGGCGTAAGTCT+TGG | + | chr8.3:46541636-46541655 | MS.gene007924:intron | 40.0% | |
| ! | GTTCAGACTTGAGGTTTTCA+AGG | - | chr8.3:46542201-46542220 | None:intergenic | 40.0% |
| ! | TGTACTAGCTTATGCCATGA+AGG | + | chr8.3:46540517-46540536 | MS.gene007924:intron | 40.0% |
| ! | TGTTGTTGAGCTGTTGATTG+AGG | + | chr8.3:46540169-46540188 | MS.gene007924:intron | 40.0% |
| !! | CTTGTTGTTTGAGGATGCAT+AGG | + | chr8.3:46542000-46542019 | MS.gene007924:intron | 40.0% |
| !!! | GTTTTTTCTCGAGTGAGAAC+GGG | + | chr8.3:46541237-46541256 | MS.gene007924:intron | 40.0% |
| !!! | TTTTTTCTCGAGTGAGAACG+GGG | + | chr8.3:46541238-46541257 | MS.gene007924:intron | 40.0% |
| ACCAGTCTAAGAGTAAGTCC+AGG | - | chr8.3:46540603-46540622 | None:intergenic | 45.0% | |
| ACTACACGAAAAACTCACCC+AGG | - | chr8.3:46541757-46541776 | None:intergenic | 45.0% | |
| AGAGAAAGGGTTGAAACGAG+AGG | - | chr8.3:46539086-46539105 | None:intergenic | 45.0% | |
| AGCTTCATGAGAAGAGAGAG+GGG | - | chr8.3:46539059-46539078 | None:intergenic | 45.0% | |
| CATTGCAGTTTCGATCACCT+TGG | - | chr8.3:46541926-46541945 | None:intergenic | 45.0% | |
| CCAGTCTAAGAGTAAGTCCA+GGG | - | chr8.3:46540602-46540621 | None:intergenic | 45.0% | |
| CCCCTTAACTGTTCTCTTGT+AGG | + | chr8.3:46541504-46541523 | MS.gene007924:intron | 45.0% | |
| CGAAAACAGAGACTCACATG+GGG | - | chr8.3:46540400-46540419 | None:intergenic | 45.0% | |
| CTTGAAAACCTCAGCAGCAA+TGG | - | chr8.3:46540971-46540990 | None:intergenic | 45.0% | |
| GAAAACAGAGACTCACATGG+GGG | - | chr8.3:46540399-46540418 | None:intergenic | 45.0% | |
| GAGCTTCATGAGAAGAGAGA+GGG | - | chr8.3:46539060-46539079 | None:intergenic | 45.0% | |
| GAGGCAAGCATCAGCAAATA+TGG | - | chr8.3:46541821-46541840 | None:intergenic | 45.0% | |
| GCTTGCCTCAAAGGTCTTAA+TGG | + | chr8.3:46541832-46541851 | MS.gene007924:CDS | 45.0% | |
| GGAGAATAGTAACTCCTGCA+TGG | - | chr8.3:46541389-46541408 | None:intergenic | 45.0% | |
| GTAGAAGAAATTCTGGGCCT+AGG | + | chr8.3:46542148-46542167 | MS.gene007924:CDS | 45.0% | |
| GTGTCTATGTCTGTCTTGTG+CGG | + | chr8.3:46539515-46539534 | MS.gene007924:intron | 45.0% | |
| TACGAGCACTCAACAACATC+TGG | - | chr8.3:46541862-46541881 | None:intergenic | 45.0% | |
| TAGACATGTTGATACCGGAC+TGG | + | chr8.3:46541661-46541680 | MS.gene007924:intron | 45.0% | |
| TAGCACATATCAGCAGAGCT+TGG | - | chr8.3:46541482-46541501 | None:intergenic | 45.0% | |
| TATGATATTGCTGGTACCCC+TGG | + | chr8.3:46539107-46539126 | MS.gene007924:CDS | 45.0% | |
| TGAAAACCTCAGCAGCAATG+GGG | - | chr8.3:46540969-46540988 | None:intergenic | 45.0% | |
| TGAGCTTCATGAGAAGAGAG+AGG | - | chr8.3:46539061-46539080 | None:intergenic | 45.0% | |
| TTTGCTGATGCTTGCCTCAA+AGG | + | chr8.3:46541823-46541842 | MS.gene007924:CDS | 45.0% | |
| ! | ATCTCAGGTACCCTTTTCAC+TGG | + | chr8.3:46539163-46539182 | MS.gene007924:intron | 45.0% |
| ! | TCATTAAGGCTCTAACAGCG+AGG | + | chr8.3:46541557-46541576 | MS.gene007924:CDS | 45.0% |
| ! | TGAGCTTGGAAAAGCTTTGG+AGG | + | chr8.3:46540252-46540271 | MS.gene007924:CDS | 45.0% |
| ! | TTTTTCTCGAGTGAGAACGG+GGG | + | chr8.3:46541239-46541258 | MS.gene007924:intron | 45.0% |
| !! | CTGAGGTTTTCAAGAAGGCT+GGG | + | chr8.3:46540977-46540996 | MS.gene007924:CDS | 45.0% |
| !! | GAGCTTGGAAAAGCTTTGGA+GGG | + | chr8.3:46540253-46540272 | MS.gene007924:CDS | 45.0% |
| !! | GGAGTTGATGTGGCTAACAT+CGG | - | chr8.3:46539141-46539160 | None:intergenic | 45.0% |
| !! | TCATCATCCAGATTGGCTTG+AGG | - | chr8.3:46541535-46541554 | None:intergenic | 45.0% |
| !! | TGAAAAGGGTACCTGAGATC+TGG | - | chr8.3:46539162-46539181 | None:intergenic | 45.0% |
| !! | TGCTGCTGAGGTTTTCAAGA+AGG | + | chr8.3:46540972-46540991 | MS.gene007924:CDS | 45.0% |
| !! | TTGACGGATCTGAGTATCGA+CGG | - | chr8.3:46538936-46538955 | None:intergenic | 45.0% |
| !!! | TAAACAAATTTTTTTTTATA+GGG | + | chr8.3:46539880-46539899 | MS.gene007924:intron | 5.0% |
| AACAGAGGTTGTGACTGCCA+AGG | + | chr8.3:46541594-46541613 | MS.gene007924:CDS | 50.0% | |
| AGATCATCACGGGTCATTCC+AGG | - | chr8.3:46540319-46540338 | None:intergenic | 50.0% | |
| ATGGGGACAGTTGAGTTCAC+AGG | - | chr8.3:46540952-46540971 | None:intergenic | 50.0% | |
| CAGGTGAGGATTGGGAAGAA+TGG | + | chr8.3:46542124-46542143 | MS.gene007924:intron | 50.0% | |
| CCACATCAACTCCAGATCTC+AGG | + | chr8.3:46539148-46539167 | MS.gene007924:CDS | 50.0% | |
| CCCTGGACTTACTCTTAGAC+TGG | + | chr8.3:46540599-46540618 | MS.gene007924:intron | 50.0% | |
| CTAACAGCGAGGACACAAGA+TGG | + | chr8.3:46541568-46541587 | MS.gene007924:CDS | 50.0% | |
| GACACAAGATGGAGGAACAG+AGG | + | chr8.3:46541579-46541598 | MS.gene007924:CDS | 50.0% | |
| GGGTTCCGCAACTTTGTCAA+TGG | + | chr8.3:46541624-46541643 | MS.gene007924:CDS | 50.0% | |
| TAACATCGGCAGCAACACCA+GGG | - | chr8.3:46539127-46539146 | None:intergenic | 50.0% | |
| TACGCAGGTGAAGATGAGCT+TGG | + | chr8.3:46540238-46540257 | MS.gene007924:CDS | 50.0% | |
| TGGGGACAGTTGAGTTCACA+GGG | - | chr8.3:46540951-46540970 | None:intergenic | 50.0% | |
| ! | ATGAGAGCACAAGCACTCCT+CGG | + | chr8.3:46539377-46539396 | MS.gene007924:intron | 50.0% |
| ! | TTGGTGTCTTGCTGTCGTGT+CGG | - | chr8.3:46539435-46539454 | None:intergenic | 50.0% |
| !! | CCTGAGATCTGGAGTTGATG+TGG | - | chr8.3:46539151-46539170 | None:intergenic | 50.0% |
| !! | GCTGAGGTTTTCAAGAAGGC+TGG | + | chr8.3:46540976-46540995 | MS.gene007924:CDS | 50.0% |
| AACATCGGCAGCAACACCAG+GGG | - | chr8.3:46539126-46539145 | None:intergenic | 55.0% | |
| AACTGTCCCCATTGCTGCTG+AGG | + | chr8.3:46540960-46540979 | MS.gene007924:CDS | 55.0% | |
| ACAGCGAGGACACAAGATGG+AGG | + | chr8.3:46541571-46541590 | MS.gene007924:CDS | 55.0% | |
| ACGGGTCATTCCAGGCTTTC+TGG | - | chr8.3:46540311-46540330 | None:intergenic | 55.0% | |
| AGAATGGCCACCTTGCGTTC+AGG | - | chr8.3:46539011-46539030 | None:intergenic | 55.0% | |
| ATGCAGGTAACTGGGTACGC+AGG | + | chr8.3:46540223-46540242 | MS.gene007924:intron | 55.0% | |
| CCTGCATGGCCTCCTATAAC+AGG | - | chr8.3:46541375-46541394 | None:intergenic | 55.0% | |
| CCTGTTATAGGAGGCCATGC+AGG | + | chr8.3:46541372-46541391 | MS.gene007924:CDS | 55.0% | |
| CGGGTCATTCCAGGCTTTCT+GGG | - | chr8.3:46540310-46540329 | None:intergenic | 55.0% | |
| CTAACATCGGCAGCAACACC+AGG | - | chr8.3:46539128-46539147 | None:intergenic | 55.0% | |
| GAACGCAAGGTGGCCATTCT+CGG | + | chr8.3:46539011-46539030 | MS.gene007924:CDS | 55.0% | |
| GCACAAGCACTCCTCGGATT+AGG | + | chr8.3:46539383-46539402 | MS.gene007924:intron | 55.0% | |
| GGCATCACCTCAAGCCAATC+TGG | + | chr8.3:46541525-46541544 | MS.gene007924:intron | 55.0% | |
| GTGACTGCCAAGGCTGGAAA+GGG | + | chr8.3:46541604-46541623 | MS.gene007924:CDS | 55.0% | |
| TGTGACTGCCAAGGCTGGAA+AGG | + | chr8.3:46541603-46541622 | MS.gene007924:CDS | 55.0% | |
| GAGGTTGTGACTGCCAAGGC+TGG | + | chr8.3:46541598-46541617 | MS.gene007924:CDS | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | + | chr8.3:46539399-46539418 | MS.gene007924:intron | 60.0% | |
| TCCAGGCTTTCTGGGCACAC+CGG | - | chr8.3:46540302-46540321 | None:intergenic | 60.0% | |
| TCTCGAGTGAGAACGGGGGT+TGG | + | chr8.3:46541243-46541262 | MS.gene007924:intron | 60.0% | |
| TGCGGAACCCTTTCCAGCCT+TGG | - | chr8.3:46541614-46541633 | None:intergenic | 60.0% | |
| ! | GAGTGAGAACGGGGGTTGGT+GGG | + | chr8.3:46541247-46541266 | MS.gene007924:intron | 60.0% |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr8.3:46539393-46539412 | MS.gene007924:intron | 60.0% |
| !! | AGTGAGAACGGGGGTTGGTG+GGG | + | chr8.3:46541248-46541267 | MS.gene007924:intron | 60.0% |
| !! | CTTGCGTTCAGGCACCGGTT+CGG | - | chr8.3:46539000-46539019 | None:intergenic | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | - | chr8.3:46539397-46539416 | None:intergenic | 65.0% | |
| ACCGGTGCCTGAACGCAAGG+TGG | + | chr8.3:46539001-46539020 | MS.gene007924:CDS | 65.0% | |
| CCGTGGCTATGCCACCGAAC+CGG | + | chr8.3:46538983-46539002 | MS.gene007924:CDS | 65.0% | |
| CGAACCGGTGCCTGAACGCA+AGG | + | chr8.3:46538998-46539017 | MS.gene007924:CDS | 65.0% | |
| CGAGTGAGAACGGGGGTTGG+TGG | + | chr8.3:46541246-46541265 | MS.gene007924:intron | 65.0% | |
| GCCACCTTGCGTTCAGGCAC+CGG | - | chr8.3:46539005-46539024 | None:intergenic | 65.0% | |
| TTCGGTGGCATAGCCACGGC+GGG | - | chr8.3:46538982-46539001 | None:intergenic | 65.0% | |
| ! | GCGGGTTATGCTGCGGGACA+CGG | - | chr8.3:46538964-46538983 | None:intergenic | 65.0% |
| ! | GGTGTCGTGTGTCCGACACC+GGG | - | chr8.3:46539414-46539433 | None:intergenic | 65.0% |
| ! | GTTCGGTGGCATAGCCACGG+CGG | - | chr8.3:46538983-46539002 | None:intergenic | 65.0% |
| !! | AGCCACGGCGGGTTATGCTG+CGG | - | chr8.3:46538971-46538990 | None:intergenic | 65.0% |
| !! | CCGGTTCGGTGGCATAGCCA+CGG | - | chr8.3:46538986-46539005 | None:intergenic | 65.0% |
| !! | CGGTGTCGTGTGTCCGACAC+CGG | - | chr8.3:46539415-46539434 | None:intergenic | 65.0% |
| !! | GAACGGGGGTTGGTGGGGAA+AGG | + | chr8.3:46541253-46541272 | MS.gene007924:intron | 65.0% |
| !! | GCGGGACACGGCTGACTTGA+CGG | - | chr8.3:46538952-46538971 | None:intergenic | 65.0% |
| GAGGGGCTGACCGATCCCAC+CGG | - | chr8.3:46539042-46539061 | None:intergenic | 70.0% | |
| GCCGGTGTGCCCAGAAAGCC+TGG | + | chr8.3:46540298-46540317 | MS.gene007924:CDS | 70.0% | |
| GGCTTTCTGGGCACACCGGC+AGG | - | chr8.3:46540298-46540317 | None:intergenic | 70.0% | |
| TCCCGCAGCATAACCCGCCG+TGG | + | chr8.3:46538966-46538985 | MS.gene007924:CDS | 70.0% | |
| !! | CCATTCTCGGTGCCGCCGGT+GGG | + | chr8.3:46539024-46539043 | MS.gene007924:CDS | 70.0% |
| !! | GCCACGGCGGGTTATGCTGC+GGG | - | chr8.3:46538970-46538989 | None:intergenic | 70.0% |
| !! | GCGTTCAGGCACCGGTTCGG+TGG | - | chr8.3:46538997-46539016 | None:intergenic | 70.0% |
| !! | GTGGCCATTCTCGGTGCCGC+CGG | + | chr8.3:46539020-46539039 | MS.gene007924:CDS | 70.0% |
| GGGCTGACCGATCCCACCGG+CGG | - | chr8.3:46539039-46539058 | None:intergenic | 75.0% | |
| ! | CCCACCGGCGGCACCGAGAA+TGG | - | chr8.3:46539027-46539046 | None:intergenic | 75.0% |
| !! | CTCGGTGCCGCCGGTGGGAT+CGG | + | chr8.3:46539029-46539048 | MS.gene007924:CDS | 75.0% |
| !! | GCCATTCTCGGTGCCGCCGG+TGG | + | chr8.3:46539023-46539042 | MS.gene007924:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 46538924 | 46542264 | 46538924 | ID=MS.gene007924 |
| chr8.3 | mRNA | 46538924 | 46542264 | 46538924 | ID=MS.gene007924.t1;Parent=MS.gene007924 |
| chr8.3 | exon | 46538924 | 46539169 | 46538924 | ID=MS.gene007924.t1.exon1;Parent=MS.gene007924.t1 |
| chr8.3 | CDS | 46538924 | 46539169 | 46538924 | ID=cds.MS.gene007924.t1;Parent=MS.gene007924.t1 |
| chr8.3 | exon | 46540229 | 46540402 | 46540229 | ID=MS.gene007924.t1.exon2;Parent=MS.gene007924.t1 |
| chr8.3 | CDS | 46540229 | 46540402 | 46540229 | ID=cds.MS.gene007924.t1;Parent=MS.gene007924.t1 |
| chr8.3 | exon | 46540925 | 46541093 | 46540925 | ID=MS.gene007924.t1.exon3;Parent=MS.gene007924.t1 |
| chr8.3 | CDS | 46540925 | 46541093 | 46540925 | ID=cds.MS.gene007924.t1;Parent=MS.gene007924.t1 |
| chr8.3 | exon | 46541361 | 46541422 | 46541361 | ID=MS.gene007924.t1.exon4;Parent=MS.gene007924.t1 |
| chr8.3 | CDS | 46541361 | 46541422 | 46541361 | ID=cds.MS.gene007924.t1;Parent=MS.gene007924.t1 |
| chr8.3 | exon | 46541526 | 46541647 | 46541526 | ID=MS.gene007924.t1.exon5;Parent=MS.gene007924.t1 |
| chr8.3 | CDS | 46541526 | 46541647 | 46541526 | ID=cds.MS.gene007924.t1;Parent=MS.gene007924.t1 |
| chr8.3 | exon | 46541807 | 46541927 | 46541807 | ID=MS.gene007924.t1.exon6;Parent=MS.gene007924.t1 |
| chr8.3 | CDS | 46541807 | 46541927 | 46541807 | ID=cds.MS.gene007924.t1;Parent=MS.gene007924.t1 |
| chr8.3 | exon | 46542127 | 46542264 | 46542127 | ID=MS.gene007924.t1.exon7;Parent=MS.gene007924.t1 |
| chr8.3 | CDS | 46542127 | 46542264 | 46542127 | ID=cds.MS.gene007924.t1;Parent=MS.gene007924.t1 |
| Gene Sequence |
| Protein sequence |
