Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09966.t1 | XP_003611291.1 | 100 | 348 | 0 | 0 | 1 | 348 | 1 | 348 | 3.50E-192 | 681.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09966.t1 | P22988 | 66.9 | 350 | 108 | 3 | 1 | 343 | 1 | 349 | 1.7e-126 | 454.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09966.t1 | G7JW16 | 100.0 | 348 | 0 | 0 | 1 | 348 | 1 | 348 | 2.5e-192 | 681.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36022 | MS.gene09966 | PPI |
| MS.gene40108 | MS.gene09966 | PPI |
| MS.gene059657 | MS.gene09966 | PPI |
| MS.gene028531 | MS.gene09966 | PPI |
| MS.gene09966 | MS.gene007924 | PPI |
| MS.gene015298 | MS.gene09966 | PPI |
| MS.gene09641 | MS.gene09966 | PPI |
| MS.gene09966 | MS.gene032254 | PPI |
| MS.gene09966 | MS.gene053632 | PPI |
| MS.gene34257 | MS.gene09966 | PPI |
| MS.gene21450 | MS.gene09966 | PPI |
| MS.gene09966 | MS.gene21451 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09966.t1 | MTR_5g012390 | 100.000 | 348 | 0 | 0 | 1 | 348 | 1 | 348 | 0.0 | 716 |
| MS.gene09966.t1 | MTR_4g101130 | 85.920 | 348 | 49 | 0 | 1 | 348 | 1 | 348 | 0.0 | 615 |
| MS.gene09966.t1 | MTR_2g087350 | 94.253 | 87 | 5 | 0 | 462 | 548 | 296 | 382 | 2.65e-45 | 165 |
| MS.gene09966.t1 | MTR_5g021750 | 92.537 | 67 | 5 | 0 | 349 | 415 | 5 | 71 | 2.85e-33 | 126 |
| MS.gene09966.t1 | MTR_1g056880 | 68.675 | 83 | 26 | 0 | 466 | 548 | 331 | 413 | 1.07e-27 | 116 |
| MS.gene09966.t1 | MTR_7g106340 | 67.470 | 83 | 27 | 0 | 466 | 548 | 315 | 397 | 2.20e-27 | 115 |
| MS.gene09966.t1 | MTR_1g056870 | 66.265 | 83 | 28 | 0 | 466 | 548 | 331 | 413 | 1.26e-25 | 110 |
| MS.gene09966.t1 | MTR_5g021780 | 84.483 | 58 | 9 | 0 | 358 | 415 | 4 | 61 | 1.92e-25 | 101 |
| MS.gene09966.t1 | MTR_2g019860 | 84.746 | 59 | 9 | 0 | 409 | 467 | 90 | 148 | 9.85e-25 | 108 |
| MS.gene09966.t1 | MTR_1g056840 | 60.241 | 83 | 26 | 1 | 466 | 548 | 312 | 387 | 4.76e-20 | 93.2 |
| MS.gene09966.t1 | MTR_4g119100 | 73.214 | 56 | 15 | 0 | 412 | 467 | 101 | 156 | 9.88e-19 | 90.5 |
| MS.gene09966.t1 | MTR_4g119100 | 73.214 | 56 | 15 | 0 | 412 | 467 | 101 | 156 | 1.03e-18 | 90.5 |
| MS.gene09966.t1 | MTR_4g119100 | 73.214 | 56 | 15 | 0 | 412 | 467 | 100 | 155 | 1.36e-18 | 90.1 |
| MS.gene09966.t1 | MTR_4g051515 | 43.373 | 83 | 47 | 0 | 466 | 548 | 309 | 391 | 1.96e-16 | 82.0 |
| MS.gene09966.t1 | MTR_1g056910 | 39.759 | 83 | 50 | 0 | 466 | 548 | 304 | 386 | 1.05e-12 | 70.5 |
| MS.gene09966.t1 | MTR_4g092690 | 24.514 | 257 | 161 | 10 | 39 | 281 | 46 | 283 | 1.84e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09966.t1 | AT4G17260 | 77.493 | 351 | 76 | 1 | 1 | 348 | 1 | 351 | 0.0 | 548 |
| MS.gene09966.t1 | AT2G35930 | 63.855 | 83 | 30 | 0 | 466 | 548 | 307 | 389 | 2.58e-26 | 111 |
| MS.gene09966.t1 | AT3G52450 | 61.446 | 83 | 32 | 0 | 466 | 548 | 331 | 413 | 5.86e-25 | 108 |
| MS.gene09966.t1 | AT3G11840 | 45.977 | 87 | 47 | 0 | 462 | 548 | 340 | 426 | 6.57e-18 | 87.0 |
| MS.gene09966.t1 | AT5G18590 | 67.857 | 56 | 18 | 0 | 412 | 467 | 83 | 138 | 2.48e-16 | 82.8 |
| MS.gene09966.t1 | AT5G18590 | 67.857 | 56 | 18 | 0 | 412 | 467 | 83 | 138 | 2.48e-16 | 82.8 |
| MS.gene09966.t1 | AT5G66290 | 53.571 | 56 | 26 | 0 | 360 | 415 | 17 | 72 | 3.43e-11 | 61.6 |
| MS.gene09966.t1 | AT2G22780 | 24.809 | 262 | 162 | 11 | 39 | 285 | 44 | 285 | 4.54e-11 | 65.1 |
Find 149 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGGTTCGGGCACTAATT+TGG | 0.197877 | 5.2:-4795331 | MS.gene09966:CDS |
| TATGAAGTGATCAGTTTAAA+AGG | 0.208835 | 5.2:-4794844 | MS.gene09966:CDS |
| GGATTTAAGGCGGTCTAAAA+TGG | 0.226195 | 5.2:+4793779 | None:intergenic |
| GAATTATGAGTTCTATTTGT+AGG | 0.259477 | 5.2:-4791065 | MS.gene09966:CDS |
| GCTGGGGCTCGCCAGATTAA+TGG | 0.260199 | 5.2:-4795519 | MS.gene09966:CDS |
| GACCTCTGCATCGTCACTGC+TGG | 0.269339 | 5.2:-4795537 | MS.gene09966:CDS |
| GTTTAAAAGGGTACACTTCT+TGG | 0.289469 | 5.2:-4794831 | MS.gene09966:CDS |
| ATCTCACCTCGTAGCTTATC+AGG | 0.323215 | 5.2:+4795642 | None:intergenic |
| ACCTCTGCATCGTCACTGCT+GGG | 0.330491 | 5.2:-4795536 | MS.gene09966:CDS |
| CATCAAGATGATCAGCAATA+AGG | 0.342388 | 5.2:+4795289 | None:intergenic |
| CCTTCGACGTCGCAGGCTTC+AGG | 0.343208 | 5.2:-4793586 | MS.gene09966:intron |
| CCCTTTGCAAGAACTGAAAC+AGG | 0.356068 | 5.2:+4794745 | None:intergenic |
| AAGAGGAGATGAAGAGGCTT+AGG | 0.361933 | 5.2:-4794627 | MS.gene09966:CDS |
| ACTCAAACATGTAAATGATA+TGG | 0.362904 | 5.2:-4790926 | MS.gene09966:CDS |
| ATCATTGGGACCAGATGGTT+TGG | 0.365992 | 5.2:-4795832 | MS.gene09966:CDS |
| AAAATGCACAAAAGCATATC+AGG | 0.366781 | 5.2:-4795858 | MS.gene09966:CDS |
| CTTGGTAGAGGAGGTGTATT+GGG | 0.368641 | 5.2:-4794673 | MS.gene09966:CDS |
| CTCCAACCGAGTCATTGGTT+CGG | 0.370504 | 5.2:-4795343 | MS.gene09966:CDS |
| AAACTATGACCCTTGCAAAC+TGG | 0.372760 | 5.2:+4792348 | None:intergenic |
| CCTTTGTAGCAAATTCAATC+TGG | 0.377803 | 5.2:+4795491 | None:intergenic |
| TTCCCCTCCAACCGAGTCAT+TGG | 0.378810 | 5.2:-4795348 | MS.gene09966:CDS |
| ATCTGGACTCGCCATTAATC+TGG | 0.381187 | 5.2:+4795508 | None:intergenic |
| ATAGTGTTTGGTGGTGAATC+TGG | 0.382024 | 5.2:-4792618 | MS.gene09966:CDS |
| AGGGTACTCCGTTGCAAACT+TGG | 0.387073 | 5.2:-4794803 | MS.gene09966:CDS |
| AAACAGGGTGAATCTTCCTT+TGG | 0.387150 | 5.2:+4794761 | None:intergenic |
| TGAGATCTTGTTGTGGCGTT+TGG | 0.389047 | 5.2:+4795755 | None:intergenic |
| CTGAATAATCAGTGGAGGCC+TGG | 0.394506 | 5.2:+4795574 | None:intergenic |
| TCCAACCGAGTCATTGGTTC+GGG | 0.395418 | 5.2:-4795342 | MS.gene09966:CDS |
| AAGGGCTTTCTCCAACGTTC+AGG | 0.399901 | 5.2:-4793926 | MS.gene09966:intron |
| ACTTGAAGAAGGATTGAGTT+AGG | 0.429690 | 5.2:+4795808 | None:intergenic |
| TTTAAAAGGGTACACTTCTT+GGG | 0.431299 | 5.2:-4794830 | MS.gene09966:CDS |
| TACATTGCTTGGAAACTCTC+TGG | 0.433042 | 5.2:-4795372 | MS.gene09966:CDS |
| AGGAGTTTCAAAGTTGTGTT+TGG | 0.433429 | 5.2:-4790998 | MS.gene09966:CDS |
| AAGCATATCAGGTTCATCAT+TGG | 0.435410 | 5.2:-4795847 | MS.gene09966:CDS |
| ATCTGTAACGGCAGACTACT+TGG | 0.440551 | 5.2:+4792372 | None:intergenic |
| TCTCATGTTGCAAGTGATAG+AGG | 0.444489 | 5.2:-4791093 | MS.gene09966:CDS |
| ATGTGCTCACTTACATTGCT+TGG | 0.446335 | 5.2:-4795383 | MS.gene09966:CDS |
| AGCATATCAGGTTCATCATT+GGG | 0.449605 | 5.2:-4795846 | MS.gene09966:CDS |
| GATATTGTAGGCATACATAG+TGG | 0.450779 | 5.2:-4795010 | MS.gene09966:intron |
| CCTGTTTCAGTTCTTGCAAA+GGG | 0.451433 | 5.2:-4794745 | MS.gene09966:CDS |
| GCTTGGTAGAGGAGGTGTAT+TGG | 0.456494 | 5.2:-4794674 | MS.gene09966:CDS |
| ATGTAAGTGAGCACATCAAC+AGG | 0.458914 | 5.2:+4795390 | None:intergenic |
| GTTAAATCATGGAGCAGGAT+TGG | 0.461494 | 5.2:-4791145 | MS.gene09966:CDS |
| CAAGGACAAGCTCGTCGACT+AGG | 0.461803 | 5.2:+4795676 | None:intergenic |
| TCTTGAGTTGCAGAATCAGT+TGG | 0.461924 | 5.2:-4794587 | MS.gene09966:CDS |
| CCCTGTTTCAGTTCTTGCAA+AGG | 0.471837 | 5.2:-4794746 | MS.gene09966:CDS |
| CTTGAGTTGCAGAATCAGTT+GGG | 0.475495 | 5.2:-4794586 | MS.gene09966:intron |
| CGTCGACTAGGTCTTGTGTT+AGG | 0.475720 | 5.2:+4795688 | None:intergenic |
| CACCACCGTAACAAAACGAT+TGG | 0.478732 | 5.2:-4793814 | MS.gene09966:CDS |
| TGAGTTAGGTCCAAACCATC+TGG | 0.480685 | 5.2:+4795822 | None:intergenic |
| GAGAATAAGATGATAGTGTT+TGG | 0.481251 | 5.2:-4792630 | MS.gene09966:CDS |
| AGGCCTCCTCACTAAAATAT+CGG | 0.489104 | 5.2:+4793606 | None:intergenic |
| AGAGCAGAGTTGTTAAATCA+TGG | 0.490916 | 5.2:-4791156 | MS.gene09966:CDS |
| TTTGGTGGTGAATCTGGAAA+TGG | 0.492857 | 5.2:-4792612 | MS.gene09966:CDS |
| GGGTACACTTCTTGGGCCAT+AGG | 0.493662 | 5.2:-4794823 | MS.gene09966:CDS |
| TTGCCTGCACAGCTTGGTAG+AGG | 0.498243 | 5.2:-4794685 | MS.gene09966:CDS |
| TGGCGTTTGGTTGGAGAAGG+AGG | 0.498929 | 5.2:+4795768 | None:intergenic |
| CCTCCTCTACCAAGCTGTGC+AGG | 0.499160 | 5.2:+4794682 | None:intergenic |
| GAGAAGGAGGTGAGGCATGT+TGG | 0.500290 | 5.2:+4795781 | None:intergenic |
| CCTTCCCCGCACTAAGATCC+AGG | 0.501282 | 5.2:-4795592 | MS.gene09966:CDS |
| GACTAGGTCTTGTGTTAGGA+TGG | 0.502443 | 5.2:+4795692 | None:intergenic |
| ATCTTGTTGTGGCGTTTGGT+TGG | 0.508851 | 5.2:+4795759 | None:intergenic |
| ATGTTGGATGGACTTGAAGA+AGG | 0.509594 | 5.2:+4795797 | None:intergenic |
| GATTTAAGGCGGTCTAAAAT+GGG | 0.509816 | 5.2:+4793780 | None:intergenic |
| CATGAAATGTTGCGTGTTGG+AGG | 0.510565 | 5.2:-4791018 | MS.gene09966:CDS |
| ACTTGGCTCGAACAATTATG+AGG | 0.512310 | 5.2:-4794786 | MS.gene09966:CDS |
| AGAGGAGATGAAGAGGCTTA+GGG | 0.514566 | 5.2:-4794626 | MS.gene09966:CDS |
| GATCTTAGTGCGGGGAAGGA+AGG | 0.520118 | 5.2:+4795596 | None:intergenic |
| GTGACAGTTCAGTGGCACTA+TGG | 0.521160 | 5.2:-4794978 | MS.gene09966:CDS |
| ATACACAAGGAGGTTATAAA+CGG | 0.522040 | 5.2:-4794871 | MS.gene09966:CDS |
| CCAGATTGAATTTGCTACAA+AGG | 0.522205 | 5.2:-4795491 | MS.gene09966:CDS |
| GGAGGCCTGGATCTTAGTGC+GGG | 0.522648 | 5.2:+4795587 | None:intergenic |
| TAAGCTACGAGGTGAGATGC+TGG | 0.524425 | 5.2:-4795637 | MS.gene09966:CDS |
| AGTGAGCACATCAACAGGAT+TGG | 0.527203 | 5.2:+4795395 | None:intergenic |
| AAGATCTCAGTGATCGGTGC+AGG | 0.527426 | 5.2:-4795741 | MS.gene09966:CDS |
| CCTGGATCTTAGTGCGGGGA+AGG | 0.529650 | 5.2:+4795592 | None:intergenic |
| ATGAAGTGATCAGTTTAAAA+GGG | 0.530193 | 5.2:-4794843 | MS.gene09966:CDS |
| GATGATCAGCAATAAGGAAA+CGG | 0.530476 | 5.2:+4795295 | None:intergenic |
| ATATTGTAGGCATACATAGT+GGG | 0.532935 | 5.2:-4795009 | MS.gene09966:intron |
| TTGTGGCGTTTGGTTGGAGA+AGG | 0.533243 | 5.2:+4795765 | None:intergenic |
| CCTGCACAGCTTGGTAGAGG+AGG | 0.533540 | 5.2:-4794682 | MS.gene09966:CDS |
| CGGTGCAGGCAACGTAGGAA+TGG | 0.538070 | 5.2:-4795727 | MS.gene09966:CDS |
| GAGTTGTTAAATCATGGAGC+AGG | 0.539941 | 5.2:-4791150 | MS.gene09966:CDS |
| AGGAGGTGAGGCATGTTGGA+TGG | 0.541391 | 5.2:+4795785 | None:intergenic |
| TGGTCAAGCATTAGTGTTGG+AGG | 0.542005 | 5.2:-4794958 | MS.gene09966:CDS |
| ATTAGTTTGCCTGCACAGCT+TGG | 0.543386 | 5.2:-4794691 | MS.gene09966:CDS |
| GAGGAGGCCTTCGACGTCGC+AGG | 0.544453 | 5.2:-4793593 | MS.gene09966:CDS |
| GTCGGAGGATTAGTCAATAC+CGG | 0.547541 | 5.2:+4793643 | None:intergenic |
| GTTACAGATTCCAGTTTGCA+AGG | 0.549468 | 5.2:-4792358 | MS.gene09966:CDS |
| ATTGACTAATCCTCCGACGG+AGG | 0.552091 | 5.2:-4793638 | MS.gene09966:CDS |
| GTTTGCAACGGAGTACCCTA+TGG | 0.552396 | 5.2:+4794807 | None:intergenic |
| GGTACACTTCTTGGGCCATA+GGG | 0.553284 | 5.2:-4794822 | MS.gene09966:CDS |
| GGTTCATCATTGGGACCAGA+TGG | 0.553995 | 5.2:-4795837 | MS.gene09966:CDS |
| CACTGATTATTCAGTGACGA+TGG | 0.555586 | 5.2:-4795565 | MS.gene09966:CDS |
| TGGATTGCTAGATGAGATGC+AGG | 0.556131 | 5.2:-4792592 | MS.gene09966:intron |
| AACCAATGACTCGGTTGGAG+GGG | 0.556552 | 5.2:+4795346 | None:intergenic |
| CGAACCAATGACTCGGTTGG+AGG | 0.557881 | 5.2:+4795344 | None:intergenic |
| CACAACAAGATCTCAGTGAT+CGG | 0.568213 | 5.2:-4795747 | MS.gene09966:CDS |
| ACTGATTATTCAGTGACGAT+GGG | 0.569202 | 5.2:-4795564 | MS.gene09966:CDS |
| CCTGAAGCCTGCGACGTCGA+AGG | 0.570229 | 5.2:+4793586 | None:intergenic |
| GAACCAATGACTCGGTTGGA+GGG | 0.570859 | 5.2:+4795345 | None:intergenic |
| GGAGAAATTTACCTGAACGT+TGG | 0.571547 | 5.2:+4793915 | None:intergenic |
| GCCCGAACCAATGACTCGGT+TGG | 0.576347 | 5.2:+4795341 | None:intergenic |
| GTCAAACTACCCTCCGTCGG+AGG | 0.581209 | 5.2:+4793628 | None:intergenic |
| TAATATTCATATGACTGAAG+AGG | 0.581935 | 5.2:-4794644 | MS.gene09966:CDS |
| CTATGGTCAAGCATTAGTGT+TGG | 0.582886 | 5.2:-4794961 | MS.gene09966:CDS |
| TGTTAATGCTCAAGATGTGC+AGG | 0.582927 | 5.2:-4795268 | MS.gene09966:intron |
| AGTGCGGGGAAGGAAGGCGG+CGG | 0.585171 | 5.2:+4795602 | None:intergenic |
| CCCCAGCAGTGACGATGCAG+AGG | 0.586925 | 5.2:+4795535 | None:intergenic |
| CAAGACAAAAGAGAGGGCTA+AGG | 0.587076 | 5.2:-4790953 | MS.gene09966:CDS |
| CTTAGTGCGGGGAAGGAAGG+CGG | 0.587177 | 5.2:+4795599 | None:intergenic |
| TTACAGATTCCAGTTTGCAA+GGG | 0.593058 | 5.2:-4792357 | MS.gene09966:intron |
| TGTTCGAGCCAAGTTTGCAA+CGG | 0.597418 | 5.2:+4794795 | None:intergenic |
| TTACATGAAATGTTGCGTGT+TGG | 0.602505 | 5.2:-4791021 | MS.gene09966:CDS |
| TGACTGAAGAGGAGATGAAG+AGG | 0.604780 | 5.2:-4794633 | MS.gene09966:CDS |
| TGGAGGCCTGGATCTTAGTG+CGG | 0.604884 | 5.2:+4795586 | None:intergenic |
| CATCTTATTCTCAATGACAC+AGG | 0.607094 | 5.2:+4792641 | None:intergenic |
| CCTCTGCATCGTCACTGCTG+GGG | 0.608669 | 5.2:-4795535 | MS.gene09966:CDS |
| GGAACACGGTGACAGTTCAG+TGG | 0.610262 | 5.2:-4794986 | MS.gene09966:CDS |
| TTGCAAACTGGAATCTGTAA+CGG | 0.615964 | 5.2:+4792360 | None:intergenic |
| GAACAATTATGAGGAACCAA+AGG | 0.619920 | 5.2:-4794777 | MS.gene09966:CDS |
| TATCAGGAATAGCGTCGACA+AGG | 0.623723 | 5.2:+4795658 | None:intergenic |
| GTGATCGGTGCAGGCAACGT+AGG | 0.624497 | 5.2:-4795732 | MS.gene09966:CDS |
| CGATCACTGAGATCTTGTTG+TGG | 0.631704 | 5.2:+4795748 | None:intergenic |
| TATTGTAGGCATACATAGTG+GGG | 0.637162 | 5.2:-4795008 | MS.gene09966:intron |
| AATAAGATGATAGTGTTTGG+TGG | 0.637222 | 5.2:-4792627 | MS.gene09966:CDS |
| GTAATTTCAAGACAAAAGAG+AGG | 0.637702 | 5.2:-4790960 | MS.gene09966:CDS |
| ACAATTAGAAGAACACAATG+AGG | 0.641975 | 5.2:+4795420 | None:intergenic |
| TGAGGAGAGTAACGAACCAA+AGG | 0.646562 | 5.2:+4795438 | None:intergenic |
| TTGACTAATCCTCCGACGGA+GGG | 0.648526 | 5.2:-4793637 | MS.gene09966:CDS |
| TAATTTCAAGACAAAAGAGA+GGG | 0.648697 | 5.2:-4790959 | MS.gene09966:CDS |
| CATCGTCACTGAATAATCAG+TGG | 0.654394 | 5.2:+4795566 | None:intergenic |
| TCGGTCAAACTACCCTCCGT+CGG | 0.658046 | 5.2:+4793625 | None:intergenic |
| GGAGAGTAACGAACCAAAGG+TGG | 0.659475 | 5.2:+4795441 | None:intergenic |
| AATAAGGAAACGGAAGCGAG+AGG | 0.661745 | 5.2:+4795305 | None:intergenic |
| CGTCACTGAATAATCAGTGG+AGG | 0.665106 | 5.2:+4795569 | None:intergenic |
| CTGATTATTCAGTGACGATG+GGG | 0.665528 | 5.2:-4795563 | MS.gene09966:CDS |
| CCTTTGCAAGAACTGAAACA+GGG | 0.666624 | 5.2:+4794746 | None:intergenic |
| GTTGTGACTGTAGACGCCGC+CGG | 0.666648 | 5.2:-4793662 | MS.gene09966:intron |
| GGTATTGACTAATCCTCCGA+CGG | 0.671418 | 5.2:-4793641 | MS.gene09966:CDS |
| TAGTGCCCGAACCAATGACT+CGG | 0.674597 | 5.2:+4795337 | None:intergenic |
| TTTGGTTGGAGAAGGAGGTG+AGG | 0.678881 | 5.2:+4795773 | None:intergenic |
| ATTGTAGGCATACATAGTGG+GGG | 0.687520 | 5.2:-4795007 | MS.gene09966:intron |
| GAGGCCTGGATCTTAGTGCG+GGG | 0.703867 | 5.2:+4795588 | None:intergenic |
| GCTAGAGAACATACACAAGG+AGG | 0.704826 | 5.2:-4794881 | MS.gene09966:CDS |
| AATGCTAGAGAACATACACA+AGG | 0.727619 | 5.2:-4794884 | MS.gene09966:CDS |
| GGAGGATTAGTCAATACCGG+CGG | 0.733018 | 5.2:+4793646 | None:intergenic |
| GCTATTCCTGATAAGCTACG+AGG | 0.790698 | 5.2:-4795648 | MS.gene09966:CDS |
| GTATAGCTTAGATGACACAG+CGG | 0.844638 | 5.2:+4792401 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTAATTATAATGCAAA+TGG | - | chr5.2:4794743-4794762 | MS.gene09966:CDS | 10.0% |
| !! | TAATTAATTATAATGCAAAT+GGG | - | chr5.2:4794744-4794763 | MS.gene09966:CDS | 10.0% |
| !!! | ATTAATATTGACTAATTATT+TGG | - | chr5.2:4794275-4794294 | MS.gene09966:intron | 10.0% |
| !!! | ATTGTATATTATGTTATTTT+CGG | + | chr5.2:4793322-4793341 | None:intergenic | 10.0% |
| !!! | TTAATTAGTTGTTAATTTTT+AGG | - | chr5.2:4793277-4793296 | MS.gene09966:intron | 10.0% |
| !! | AAAAAAAAATCCTTTAATCT+GGG | + | chr5.2:4794922-4794941 | None:intergenic | 15.0% |
| !! | AATAAGCTAAAAATAACTTA+TGG | - | chr5.2:4793397-4793416 | MS.gene09966:intron | 15.0% |
| !! | TAAAAAAAAATCCTTTAATC+TGG | + | chr5.2:4794923-4794942 | None:intergenic | 15.0% |
| !! | TAAATACAATAACAACAAAA+TGG | + | chr5.2:4792249-4792268 | None:intergenic | 15.0% |
| !!! | AAAATACGTTATTTTTAAGA+AGG | + | chr5.2:4794890-4794909 | None:intergenic | 15.0% |
| !!! | TAAATTTTGACAAATTTTCA+TGG | - | chr5.2:4794348-4794367 | MS.gene09966:intron | 15.0% |
| !!! | TAGTAAACTCAATATTTTAT+CGG | - | chr5.2:4791732-4791751 | MS.gene09966:intron | 15.0% |
| !!! | TATTTTTTTTTCAAGCAATA+AGG | + | chr5.2:4791543-4791562 | None:intergenic | 15.0% |
| !! | AACAAAATGGTACATATATT+AGG | + | chr5.2:4792236-4792255 | None:intergenic | 20.0% |
| !! | AGTATGTTGAGAAATAAATA+TGG | - | chr5.2:4792316-4792335 | MS.gene09966:intron | 20.0% |
| !! | TAAAAAAATTATACCACCTT+TGG | - | chr5.2:4791319-4791338 | MS.gene09966:intron | 20.0% |
| !!! | AAAGAAAACATACAATTTTG+AGG | + | chr5.2:4793019-4793038 | None:intergenic | 20.0% |
| !!! | AAGAAAACATACAATTTTGA+GGG | + | chr5.2:4793018-4793037 | None:intergenic | 20.0% |
| !!! | AAGATATTTTAAGAAGCTTA+TGG | - | chr5.2:4793638-4793657 | MS.gene09966:CDS | 20.0% |
| !!! | AAGTTATGTTTGTTTTTTAG+TGG | + | chr5.2:4792496-4792515 | None:intergenic | 20.0% |
| !!! | AGATATTTTAAGAAGCTTAT+GGG | - | chr5.2:4793639-4793658 | MS.gene09966:CDS | 20.0% |
| !!! | AGTTATGTTTGTTTTTTAGT+GGG | + | chr5.2:4792495-4792514 | None:intergenic | 20.0% |
| !!! | ATAGTCAAGAATCTATTTTT+AGG | + | chr5.2:4793742-4793761 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAT+AGG | - | chr5.2:4794016-4794035 | MS.gene09966:intron | 20.0% |
| !!! | CAACATACTATTCATTTTAT+TGG | - | chr5.2:4794318-4794337 | MS.gene09966:intron | 20.0% |
| !!! | GGAAATTTGAAAACTTTTTA+GGG | + | chr5.2:4793798-4793817 | None:intergenic | 20.0% |
| !!! | TAGTCAAGAATCTATTTTTA+GGG | + | chr5.2:4793741-4793760 | None:intergenic | 20.0% |
| !!! | TATTTTCATTCTCTTTGTAT+TGG | - | chr5.2:4793042-4793061 | MS.gene09966:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+GGG | - | chr5.2:4794017-4794036 | MS.gene09966:intron | 20.0% |
| !!! | TTCGTTTATTCTTTTTTACT+GGG | - | chr5.2:4795394-4795413 | MS.gene09966:CDS | 20.0% |
| !!! | TTTCGTTTATTCTTTTTTAC+TGG | - | chr5.2:4795393-4795412 | MS.gene09966:CDS | 20.0% |
| ! | AAAATAAGAAAATAGTGACC+AGG | - | chr5.2:4795150-4795169 | MS.gene09966:intron | 25.0% |
| ! | AAACTATCATTCATCAAGTT+AGG | + | chr5.2:4795369-4795388 | None:intergenic | 25.0% |
| ! | AAATGAATAGTATGTTGATG+TGG | + | chr5.2:4794315-4794334 | None:intergenic | 25.0% |
| ! | AACTGACAATAAGTTTAACA+AGG | - | chr5.2:4794660-4794679 | MS.gene09966:CDS | 25.0% |
| ! | ACTCAAACATGTAAATGATA+TGG | - | chr5.2:4795847-4795866 | MS.gene09966:CDS | 25.0% |
| ! | ACTTAAGTCCATTCAAAAAT+TGG | + | chr5.2:4795285-4795304 | None:intergenic | 25.0% |
| ! | ATGAAGTGATCAGTTTAAAA+GGG | - | chr5.2:4791930-4791949 | MS.gene09966:intron | 25.0% |
| ! | ATGTAAAAGCTAAAGTCATT+AGG | - | chr5.2:4793951-4793970 | MS.gene09966:intron | 25.0% |
| ! | ATTCAAATTCTCAAAACTTC+AGG | + | chr5.2:4795078-4795097 | None:intergenic | 25.0% |
| ! | ATTCATCAAGTTAGGATTAT+TGG | + | chr5.2:4795361-4795380 | None:intergenic | 25.0% |
| ! | GAATAGTTGATTAGAATGTA+GGG | - | chr5.2:4793241-4793260 | MS.gene09966:intron | 25.0% |
| ! | GAATTATGAGTTCTATTTGT+AGG | - | chr5.2:4795708-4795727 | MS.gene09966:CDS | 25.0% |
| ! | GATCAATGCAGATTATAATA+TGG | + | chr5.2:4794857-4794876 | None:intergenic | 25.0% |
| ! | GATGATGAAATTTGTGAAAT+GGG | + | chr5.2:4793917-4793936 | None:intergenic | 25.0% |
| ! | TAATATTCATATGACTGAAG+AGG | - | chr5.2:4792129-4792148 | MS.gene09966:intron | 25.0% |
| ! | TAATTTCAAGACAAAAGAGA+GGG | - | chr5.2:4795814-4795833 | MS.gene09966:CDS | 25.0% |
| ! | TATGAAGTGATCAGTTTAAA+AGG | - | chr5.2:4791929-4791948 | MS.gene09966:intron | 25.0% |
| ! | TCTATTTGACTAATAAGTGA+AGG | - | chr5.2:4792339-4792358 | MS.gene09966:intron | 25.0% |
| ! | TGAAAGAAAAATGAGGAATT+GGG | + | chr5.2:4792882-4792901 | None:intergenic | 25.0% |
| ! | TGAATAGTTGATTAGAATGT+AGG | - | chr5.2:4793240-4793259 | MS.gene09966:intron | 25.0% |
| ! | TGGATAAACAACTTAATGAA+AGG | + | chr5.2:4794013-4794032 | None:intergenic | 25.0% |
| ! | TTATCACTTCTTAGAATTGA+AGG | - | chr5.2:4793530-4793549 | MS.gene09966:intron | 25.0% |
| ! | TTGACTAATTATTTGGTTGT+TGG | - | chr5.2:4794282-4794301 | MS.gene09966:intron | 25.0% |
| !! | ATACTATTCATTTTATTGGC+AGG | - | chr5.2:4794322-4794341 | MS.gene09966:intron | 25.0% |
| !! | GGGAAATTTGAAAACTTTTT+AGG | + | chr5.2:4793799-4793818 | None:intergenic | 25.0% |
| !! | TGATGATGAAATTTGTGAAA+TGG | + | chr5.2:4793918-4793937 | None:intergenic | 25.0% |
| !! | TGTGTCAAAGAAAATTTTGA+GGG | - | chr5.2:4795655-4795674 | MS.gene09966:CDS | 25.0% |
| !! | TTGTGTCAAAGAAAATTTTG+AGG | - | chr5.2:4795654-4795673 | MS.gene09966:CDS | 25.0% |
| !!! | AGATGAAAATTTTAAGTTCG+CGG | + | chr5.2:4792803-4792822 | None:intergenic | 25.0% |
| !!! | ATACAATTTTGAGGGATTTA+AGG | + | chr5.2:4793010-4793029 | None:intergenic | 25.0% |
| !!! | CACATGTCATTTTTTTATGT+GGG | + | chr5.2:4792461-4792480 | None:intergenic | 25.0% |
| !!! | TATGTTATTTTCGGATAACT+TGG | + | chr5.2:4793313-4793332 | None:intergenic | 25.0% |
| !!! | TATTCTTTTTTACTGGGAAT+CGG | - | chr5.2:4795400-4795419 | MS.gene09966:CDS | 25.0% |
| AAACTGTCAGCAATAAAAAG+AGG | + | chr5.2:4793839-4793858 | None:intergenic | 30.0% | |
| AACTGTCAGCAATAAAAAGA+GGG | + | chr5.2:4793838-4793857 | None:intergenic | 30.0% | |
| AAGCTAAAGTCATTAGGTTA+TGG | - | chr5.2:4793957-4793976 | MS.gene09966:intron | 30.0% | |
| AATTATAATGCAAATGGGTG+TGG | - | chr5.2:4794749-4794768 | MS.gene09966:CDS | 30.0% | |
| ACAATTAGAAGAACACAATG+AGG | + | chr5.2:4791356-4791375 | None:intergenic | 30.0% | |
| ACCATTGAAGATTGAATTAG+AGG | - | chr5.2:4793602-4793621 | MS.gene09966:CDS | 30.0% | |
| ACTAATTATTTGGTTGTTGG+TGG | - | chr5.2:4794285-4794304 | MS.gene09966:intron | 30.0% | |
| AGTTGTGAATGAAATTCGAT+TGG | + | chr5.2:4794644-4794663 | None:intergenic | 30.0% | |
| ATACACAAGGAGGTTATAAA+CGG | - | chr5.2:4791902-4791921 | MS.gene09966:intron | 30.0% | |
| ATATTGTAGGCATACATAGT+GGG | - | chr5.2:4791764-4791783 | MS.gene09966:intron | 30.0% | |
| ATGTCATTATTAAGGTCACT+TGG | + | chr5.2:4794513-4794532 | None:intergenic | 30.0% | |
| CCACATAAAAAAATGACATG+TGG | - | chr5.2:4792459-4792478 | MS.gene09966:intron | 30.0% | |
| GTAATTTCAAGACAAAAGAG+AGG | - | chr5.2:4795813-4795832 | MS.gene09966:CDS | 30.0% | |
| GTGAAAGAAAAATGAGGAAT+TGG | + | chr5.2:4792883-4792902 | None:intergenic | 30.0% | |
| GTTTGTGAATTGATGTTGAT+AGG | - | chr5.2:4795563-4795582 | MS.gene09966:CDS | 30.0% | |
| TAATGCAGATTGAATGGAAT+TGG | + | chr5.2:4793773-4793792 | None:intergenic | 30.0% | |
| TCAGGACTCAAAAAATTTCT+TGG | + | chr5.2:4792401-4792420 | None:intergenic | 30.0% | |
| TCCTCTAATTCAATCTTCAA+TGG | + | chr5.2:4793606-4793625 | None:intergenic | 30.0% | |
| TCGGTTCAATTTGATATTGT+AGG | - | chr5.2:4791751-4791770 | MS.gene09966:intron | 30.0% | |
| TTTCATCATCAAAATCAGCA+TGG | - | chr5.2:4793927-4793946 | MS.gene09966:CDS | 30.0% | |
| ! | AATAAGATGATAGTGTTTGG+TGG | - | chr5.2:4794146-4794165 | MS.gene09966:intron | 30.0% |
| ! | AGAGCATCATGTCATTATTA+AGG | + | chr5.2:4794521-4794540 | None:intergenic | 30.0% |
| ! | CAAACTTCTTTTCGATGTTT+CGG | - | chr5.2:4795532-4795551 | MS.gene09966:CDS | 30.0% |
| ! | CTTGGAATAGGATTACATTT+TGG | - | chr5.2:4794798-4794817 | MS.gene09966:CDS | 30.0% |
| ! | CTTTTTATTGCTGACAGTTT+TGG | - | chr5.2:4793839-4793858 | MS.gene09966:intron | 30.0% |
| ! | GAGAATAAGATGATAGTGTT+TGG | - | chr5.2:4794143-4794162 | MS.gene09966:intron | 30.0% |
| ! | TACATTTTCCTAGGAAAACT+AGG | - | chr5.2:4795179-4795198 | MS.gene09966:intron | 30.0% |
| ! | TGAATTGATGTTGATAGGTT+TGG | - | chr5.2:4795568-4795587 | MS.gene09966:CDS | 30.0% |
| ! | TTTAAAAGGGTACACTTCTT+GGG | - | chr5.2:4791943-4791962 | MS.gene09966:intron | 30.0% |
| ! | TTTTCGTAATTAATCCTGGA+AGG | - | chr5.2:4793366-4793385 | MS.gene09966:intron | 30.0% |
| !! | AGTTTCCAATCGTTTTGTTA+CGG | + | chr5.2:4792967-4792986 | None:intergenic | 30.0% |
| !! | CTATGTGTATTGACTTGTTT+GGG | + | chr5.2:4793490-4793509 | None:intergenic | 30.0% |
| !! | GTTGTTTTCGTAATTAATCC+TGG | - | chr5.2:4793362-4793381 | MS.gene09966:intron | 30.0% |
| !! | TAGTGAGTTTGCTAAAATCA+CGG | + | chr5.2:4791637-4791656 | None:intergenic | 30.0% |
| !! | TATTGTTAAGTACTGACTAC+TGG | - | chr5.2:4794082-4794101 | MS.gene09966:intron | 30.0% |
| !! | TCTATGTGTATTGACTTGTT+TGG | + | chr5.2:4793491-4793510 | None:intergenic | 30.0% |
| !!! | AACATTTCTGGTTTTGGAAT+TGG | - | chr5.2:4794214-4794233 | MS.gene09966:intron | 30.0% |
| !!! | CAAGCACAAGATTCTTTTTT+TGG | - | chr5.2:4793713-4793732 | MS.gene09966:intron | 30.0% |
| !!! | CCACATGTCATTTTTTTATG+TGG | + | chr5.2:4792462-4792481 | None:intergenic | 30.0% |
| !!! | GAAATTTTTTGAGTCCTGAT+AGG | - | chr5.2:4792402-4792421 | MS.gene09966:CDS | 30.0% |
| !!! | TCATTTTTTTATGTGGGTGT+AGG | + | chr5.2:4792455-4792474 | None:intergenic | 30.0% |
| AAAAATGACATGTGGCAATG+TGG | - | chr5.2:4792467-4792486 | MS.gene09966:intron | 35.0% | |
| AAAATGACATGTGGCAATGT+GGG | - | chr5.2:4792468-4792487 | MS.gene09966:intron | 35.0% | |
| AAGCATATCAGGTTCATCAT+TGG | - | chr5.2:4790926-4790945 | MS.gene09966:CDS | 35.0% | |
| AATCCACCCTTAGTAAATTG+AGG | - | chr5.2:4794588-4794607 | MS.gene09966:CDS | 35.0% | |
| AATGCTAGAGAACATACACA+AGG | - | chr5.2:4791889-4791908 | MS.gene09966:intron | 35.0% | |
| ACAGGTTATGTGCAATATGA+TGG | - | chr5.2:4793674-4793693 | MS.gene09966:intron | 35.0% | |
| ACTGATTATTCAGTGACGAT+GGG | - | chr5.2:4791209-4791228 | MS.gene09966:intron | 35.0% | |
| ACTTGAAGAAGGATTGAGTT+AGG | + | chr5.2:4790968-4790987 | None:intergenic | 35.0% | |
| ACTTGATTCATGTAGATGGT+TGG | - | chr5.2:4794995-4795014 | MS.gene09966:CDS | 35.0% | |
| AGAGCAGAGTTGTTAAATCA+TGG | - | chr5.2:4795617-4795636 | MS.gene09966:CDS | 35.0% | |
| AGCATATCAGGTTCATCATT+GGG | - | chr5.2:4790927-4790946 | MS.gene09966:CDS | 35.0% | |
| AGGAGTTTCAAAGTTGTGTT+TGG | - | chr5.2:4795775-4795794 | MS.gene09966:CDS | 35.0% | |
| AGGGAATAATGCAGATTGAA+TGG | + | chr5.2:4793779-4793798 | None:intergenic | 35.0% | |
| AGTCCATTCAAAAATTGGTC+AGG | + | chr5.2:4795280-4795299 | None:intergenic | 35.0% | |
| ATAACTGATAAGCTGATCAG+GGG | + | chr5.2:4793514-4793533 | None:intergenic | 35.0% | |
| ATAGGTTTGGATCAACTTTG+TGG | - | chr5.2:4795581-4795600 | MS.gene09966:CDS | 35.0% | |
| ATGGATGAAGTTACATACCA+TGG | + | chr5.2:4794838-4794857 | None:intergenic | 35.0% | |
| CATCAAGATGATCAGCAATA+AGG | + | chr5.2:4791487-4791506 | None:intergenic | 35.0% | |
| CATCACTTGATTCATGTAGA+TGG | - | chr5.2:4794991-4795010 | MS.gene09966:CDS | 35.0% | |
| CATCTTATTCTCAATGACAC+AGG | + | chr5.2:4794135-4794154 | None:intergenic | 35.0% | |
| CCTTTGTAGCAAATTCAATC+TGG | + | chr5.2:4791285-4791304 | None:intergenic | 35.0% | |
| CTTGCTTTCATTCTTGGAAT+AGG | - | chr5.2:4794786-4794805 | MS.gene09966:CDS | 35.0% | |
| GAACAATTATGAGGAACCAA+AGG | - | chr5.2:4791996-4792015 | MS.gene09966:intron | 35.0% | |
| GATAACTGATAAGCTGATCA+GGG | + | chr5.2:4793515-4793534 | None:intergenic | 35.0% | |
| GATATTGTAGGCATACATAG+TGG | - | chr5.2:4791763-4791782 | MS.gene09966:intron | 35.0% | |
| GATGATCAGCAATAAGGAAA+CGG | + | chr5.2:4791481-4791500 | None:intergenic | 35.0% | |
| GTCCATTCAAAAATTGGTCA+GGG | + | chr5.2:4795279-4795298 | None:intergenic | 35.0% | |
| GTTTGCTTAGGACTAACATA+AGG | + | chr5.2:4795517-4795536 | None:intergenic | 35.0% | |
| TAGCAGCCTCAATTTACTAA+GGG | + | chr5.2:4794597-4794616 | None:intergenic | 35.0% | |
| TAGGAAAATGTACAAAGACC+TGG | + | chr5.2:4795171-4795190 | None:intergenic | 35.0% | |
| TATTGTAGGCATACATAGTG+GGG | - | chr5.2:4791765-4791784 | MS.gene09966:intron | 35.0% | |
| TCCATTCAAAAATTGGTCAG+GGG | + | chr5.2:4795278-4795297 | None:intergenic | 35.0% | |
| TCCTAGGAAAACTAGGTAAA+AGG | - | chr5.2:4795186-4795205 | MS.gene09966:intron | 35.0% | |
| TCGAGAGTGAAAGAAAAATG+AGG | + | chr5.2:4792889-4792908 | None:intergenic | 35.0% | |
| TCTTGAATGACATGCAGAAT+TGG | - | chr5.2:4795216-4795235 | MS.gene09966:intron | 35.0% | |
| TGATAACTGATAAGCTGATC+AGG | + | chr5.2:4793516-4793535 | None:intergenic | 35.0% | |
| TTACAGATTCCAGTTTGCAA+GGG | - | chr5.2:4794416-4794435 | MS.gene09966:intron | 35.0% | |
| TTACATGAAATGTTGCGTGT+TGG | - | chr5.2:4795752-4795771 | MS.gene09966:CDS | 35.0% | |
| TTCGAAAAGCAATTAGTGAG+CGG | + | chr5.2:4794696-4794715 | None:intergenic | 35.0% | |
| TTGCAAACTGGAATCTGTAA+CGG | + | chr5.2:4794416-4794435 | None:intergenic | 35.0% | |
| TTTCGATGTTTCGGAAAGAA+GGG | - | chr5.2:4795541-4795560 | MS.gene09966:CDS | 35.0% | |
| ! | ACTACTGGTCTGTTATTCAT+TGG | - | chr5.2:4794097-4794116 | MS.gene09966:intron | 35.0% |
| ! | AGAGGGATGAGAAAATGTTT+TGG | + | chr5.2:4793821-4793840 | None:intergenic | 35.0% |
| ! | AGGGATGAGAAAATGTTTTG+GGG | + | chr5.2:4793819-4793838 | None:intergenic | 35.0% |
| ! | AGGTCTTTGTACATTTTCCT+AGG | - | chr5.2:4795170-4795189 | MS.gene09966:intron | 35.0% |
| ! | CATCGAAAAGAAGTTTGCTT+AGG | + | chr5.2:4795529-4795548 | None:intergenic | 35.0% |
| ! | CTTCAGGTGATTGTTGATTA+TGG | - | chr5.2:4793203-4793222 | MS.gene09966:intron | 35.0% |
| ! | CTTGCAAAGTTTTTCTGCAA+TGG | - | chr5.2:4793877-4793896 | MS.gene09966:intron | 35.0% |
| ! | GAGGGATGAGAAAATGTTTT+GGG | + | chr5.2:4793820-4793839 | None:intergenic | 35.0% |
| ! | GATTTAAGGCGGTCTAAAAT+GGG | + | chr5.2:4792996-4793015 | None:intergenic | 35.0% |
| ! | GTTCTTGCAAAGGGATTTTA+TGG | - | chr5.2:4792037-4792056 | MS.gene09966:intron | 35.0% |
| ! | GTTTAAAAGGGTACACTTCT+TGG | - | chr5.2:4791942-4791961 | MS.gene09966:intron | 35.0% |
| ! | TTTTCGATGTTTCGGAAAGA+AGG | - | chr5.2:4795540-4795559 | MS.gene09966:CDS | 35.0% |
| !! | AAGGGATTTTATGGCATTGA+TGG | - | chr5.2:4792046-4792065 | MS.gene09966:intron | 35.0% |
| !! | ACCTTTTACCTAGTTTTCCT+AGG | + | chr5.2:4795190-4795209 | None:intergenic | 35.0% |
| !! | CAATTTTGAGGGATTTAAGG+CGG | + | chr5.2:4793007-4793026 | None:intergenic | 35.0% |
| !! | CCAGATTGAATTTGCTACAA+AGG | - | chr5.2:4791282-4791301 | MS.gene09966:intron | 35.0% |
| !! | CTTAAGTTGAAGTTCATTGC+AGG | - | chr5.2:4795298-4795317 | MS.gene09966:CDS | 35.0% |
| !! | CTTATTTTCATAAGCCTTCC+AGG | + | chr5.2:4793383-4793402 | None:intergenic | 35.0% |
| !!! | GTTTGACCGATATTTTAGTG+AGG | - | chr5.2:4793161-4793180 | MS.gene09966:intron | 35.0% |
| AAACAGGGTGAATCTTCCTT+TGG | + | chr5.2:4792015-4792034 | None:intergenic | 40.0% | |
| AAACTATGACCCTTGCAAAC+TGG | + | chr5.2:4794428-4794447 | None:intergenic | 40.0% | |
| AACTTTGTGGTTGTGCAGAA+GGG | - | chr5.2:4795594-4795613 | MS.gene09966:CDS | 40.0% | |
| AGGCCTCCTCACTAAAATAT+CGG | + | chr5.2:4793170-4793189 | None:intergenic | 40.0% | |
| AGTTTGCAAGGGTCATAGTT+TGG | - | chr5.2:4794427-4794446 | MS.gene09966:intron | 40.0% | |
| ATGTAAGTGAGCACATCAAC+AGG | + | chr5.2:4791386-4791405 | None:intergenic | 40.0% | |
| ATGTGCTCACTTACATTGCT+TGG | - | chr5.2:4791390-4791409 | MS.gene09966:intron | 40.0% | |
| ATTGTAGGCATACATAGTGG+GGG | - | chr5.2:4791766-4791785 | MS.gene09966:intron | 40.0% | |
| CACAACAAGATCTCAGTGAT+CGG | - | chr5.2:4791026-4791045 | MS.gene09966:CDS | 40.0% | |
| CATATGACGAAGACCCTATT+TGG | + | chr5.2:4794033-4794052 | None:intergenic | 40.0% | |
| CATCGTCACTGAATAATCAG+TGG | + | chr5.2:4791210-4791229 | None:intergenic | 40.0% | |
| CCTGTTTCAGTTCTTGCAAA+GGG | - | chr5.2:4792028-4792047 | MS.gene09966:intron | 40.0% | |
| CCTTTGCAAGAACTGAAACA+GGG | + | chr5.2:4792030-4792049 | None:intergenic | 40.0% | |
| CTATGGTCAAGCATTAGTGT+TGG | - | chr5.2:4791812-4791831 | MS.gene09966:intron | 40.0% | |
| CTCAAATGTTGAGAGAGAAG+AGG | + | chr5.2:4792558-4792577 | None:intergenic | 40.0% | |
| CTGATTATTCAGTGACGATG+GGG | - | chr5.2:4791210-4791229 | MS.gene09966:intron | 40.0% | |
| GAAGTTACATACCATGGAGA+AGG | + | chr5.2:4794832-4794851 | None:intergenic | 40.0% | |
| GAGTTGTTAAATCATGGAGC+AGG | - | chr5.2:4795623-4795642 | MS.gene09966:CDS | 40.0% | |
| GCAAAGAATTGGGTGAGTTA+TGG | + | chr5.2:4792914-4792933 | None:intergenic | 40.0% | |
| GGAGAAATTTACCTGAACGT+TGG | + | chr5.2:4792861-4792880 | None:intergenic | 40.0% | |
| GTAGCAGCCTCAATTTACTA+AGG | + | chr5.2:4794598-4794617 | None:intergenic | 40.0% | |
| GTATAGCTTAGATGACACAG+CGG | + | chr5.2:4794375-4794394 | None:intergenic | 40.0% | |
| GTCTACAGACGCAAAGAATT+GGG | + | chr5.2:4792924-4792943 | None:intergenic | 40.0% | |
| GTTAAATCATGGAGCAGGAT+TGG | - | chr5.2:4795628-4795647 | MS.gene09966:CDS | 40.0% | |
| GTTACAGATTCCAGTTTGCA+AGG | - | chr5.2:4794415-4794434 | MS.gene09966:intron | 40.0% | |
| TACATTGCTTGGAAACTCTC+TGG | - | chr5.2:4791401-4791420 | MS.gene09966:intron | 40.0% | |
| TATGGGAGTAAGCTGAAAAC+AGG | - | chr5.2:4793656-4793675 | MS.gene09966:intron | 40.0% | |
| TCTCATGTTGCAAGTGATAG+AGG | - | chr5.2:4795680-4795699 | MS.gene09966:CDS | 40.0% | |
| TGATGCTCTCATCATAGACA+TGG | - | chr5.2:4794532-4794551 | MS.gene09966:intron | 40.0% | |
| TGGATATTCATCCTTCTCCA+TGG | - | chr5.2:4794818-4794837 | MS.gene09966:CDS | 40.0% | |
| TGTTAATGCTCAAGATGTGC+AGG | - | chr5.2:4791505-4791524 | MS.gene09966:intron | 40.0% | |
| TTCTCCAAAAAGCTTAGCAC+TGG | + | chr5.2:4791845-4791864 | None:intergenic | 40.0% | |
| TTGGCACTTGCTTTCATTCT+TGG | - | chr5.2:4794780-4794799 | MS.gene09966:CDS | 40.0% | |
| ! | ACCCCTGACCAATTTTTGAA+TGG | - | chr5.2:4795274-4795293 | MS.gene09966:CDS | 40.0% |
| ! | ACTTGGCTCGAACAATTATG+AGG | - | chr5.2:4791987-4792006 | MS.gene09966:intron | 40.0% |
| ! | ATGTTGGATGGACTTGAAGA+AGG | + | chr5.2:4790979-4790998 | None:intergenic | 40.0% |
| ! | CACTGATTATTCAGTGACGA+TGG | - | chr5.2:4791208-4791227 | MS.gene09966:intron | 40.0% |
| ! | CTTGAGTTGCAGAATCAGTT+GGG | - | chr5.2:4792187-4792206 | MS.gene09966:intron | 40.0% |
| ! | GGATTTAAGGCGGTCTAAAA+TGG | + | chr5.2:4792997-4793016 | None:intergenic | 40.0% |
| ! | TCTTGAGTTGCAGAATCAGT+TGG | - | chr5.2:4792186-4792205 | MS.gene09966:intron | 40.0% |
| ! | TGTTCCAGTGCTAAGCTTTT+TGG | - | chr5.2:4791838-4791857 | MS.gene09966:intron | 40.0% |
| ! | TTGCTATTGCAGTGCATGTT+TGG | + | chr5.2:4791665-4791684 | None:intergenic | 40.0% |
| ! | TTTTTATGTGGGTGTAGGAG+TGG | + | chr5.2:4792450-4792469 | None:intergenic | 40.0% |
| !! | AATGGTGGATCGAATGTAGT+GGG | + | chr5.2:4792716-4792735 | None:intergenic | 40.0% |
| !! | ATAGTGTTTGGTGGTGAATC+TGG | - | chr5.2:4794155-4794174 | MS.gene09966:intron | 40.0% |
| !! | GAGAAAGGAGAAATGGGTTA+AGG | + | chr5.2:4792691-4792710 | None:intergenic | 40.0% |
| !! | TTCCAATCGTTTTGTTACGG+TGG | + | chr5.2:4792964-4792983 | None:intergenic | 40.0% |
| !! | TTTGGTGGTGAATCTGGAAA+TGG | - | chr5.2:4794161-4794180 | MS.gene09966:intron | 40.0% |
| !!! | GGATTTTATGGCATTGATGG+TGG | - | chr5.2:4792049-4792068 | MS.gene09966:intron | 40.0% |
| !!! | TGACCGATATTTTAGTGAGG+AGG | - | chr5.2:4793164-4793183 | MS.gene09966:intron | 40.0% |
| !!! | TGAGGGAACATTTCTGGTTT+TGG | - | chr5.2:4794208-4794227 | MS.gene09966:intron | 40.0% |
| AAAGCCCTTTCTGCAATGAG+AGG | + | chr5.2:4792836-4792855 | None:intergenic | 45.0% | |
| AACATGCGCACAAGTGCAAT+TGG | + | chr5.2:4791579-4791598 | None:intergenic | 45.0% | |
| AAGAGGAGATGAAGAGGCTT+AGG | - | chr5.2:4792146-4792165 | MS.gene09966:intron | 45.0% | |
| AATAAGGAAACGGAAGCGAG+AGG | + | chr5.2:4791471-4791490 | None:intergenic | 45.0% | |
| AATGGGTGTGGTTCTTGGAT+TGG | - | chr5.2:4794761-4794780 | MS.gene09966:CDS | 45.0% | |
| ACATGCGCACAAGTGCAATT+GGG | + | chr5.2:4791578-4791597 | None:intergenic | 45.0% | |
| AGAGAGGAGAAATGTAGTGG+TGG | + | chr5.2:4792769-4792788 | None:intergenic | 45.0% | |
| AGAGATGGAAGAGAGAGAGT+TGG | + | chr5.2:4792527-4792546 | None:intergenic | 45.0% | |
| AGAGGAGATGAAGAGGCTTA+GGG | - | chr5.2:4792147-4792166 | MS.gene09966:intron | 45.0% | |
| AGTGAGCACATCAACAGGAT+TGG | + | chr5.2:4791381-4791400 | None:intergenic | 45.0% | |
| ATCATTGGGACCAGATGGTT+TGG | - | chr5.2:4790941-4790960 | MS.gene09966:CDS | 45.0% | |
| ATCTCACCTCGTAGCTTATC+AGG | + | chr5.2:4791134-4791153 | None:intergenic | 45.0% | |
| ATCTGGACTCGCCATTAATC+TGG | + | chr5.2:4791268-4791287 | None:intergenic | 45.0% | |
| ATCTGTAACGGCAGACTACT+TGG | + | chr5.2:4794404-4794423 | None:intergenic | 45.0% | |
| ATGCAAATGGGTGTGGTTCT+TGG | - | chr5.2:4794756-4794775 | MS.gene09966:CDS | 45.0% | |
| ATTGCACTTGTGCGCATGTT+TGG | - | chr5.2:4791579-4791598 | MS.gene09966:intron | 45.0% | |
| CAACTTTGTGGTTGTGCAGA+AGG | - | chr5.2:4795593-4795612 | MS.gene09966:CDS | 45.0% | |
| CAAGACAAAAGAGAGGGCTA+AGG | - | chr5.2:4795820-4795839 | MS.gene09966:CDS | 45.0% | |
| CACCACCGTAACAAAACGAT+TGG | - | chr5.2:4792959-4792978 | MS.gene09966:intron | 45.0% | |
| CAGCCTCAATTTACTAAGGG+TGG | + | chr5.2:4794594-4794613 | None:intergenic | 45.0% | |
| CATGAAATGTTGCGTGTTGG+AGG | - | chr5.2:4795755-4795774 | MS.gene09966:CDS | 45.0% | |
| CCCTGTTTCAGTTCTTGCAA+AGG | - | chr5.2:4792027-4792046 | MS.gene09966:intron | 45.0% | |
| CCCTTTGCAAGAACTGAAAC+AGG | + | chr5.2:4792031-4792050 | None:intergenic | 45.0% | |
| CCTATGGTGGTATACCTATC+AGG | + | chr5.2:4792419-4792438 | None:intergenic | 45.0% | |
| CCTGATAGGTATACCACCAT+AGG | - | chr5.2:4792416-4792435 | MS.gene09966:CDS | 45.0% | |
| CGATCACTGAGATCTTGTTG+TGG | + | chr5.2:4791028-4791047 | None:intergenic | 45.0% | |
| CGTCACTGAATAATCAGTGG+AGG | + | chr5.2:4791207-4791226 | None:intergenic | 45.0% | |
| CGTCTACAGACGCAAAGAAT+TGG | + | chr5.2:4792925-4792944 | None:intergenic | 45.0% | |
| GAAGAGGAAACACTCAGAGA+TGG | + | chr5.2:4792542-4792561 | None:intergenic | 45.0% | |
| GATAGGTATACCACCATAGG+TGG | - | chr5.2:4792419-4792438 | MS.gene09966:CDS | 45.0% | |
| GCTAGAGAACATACACAAGG+AGG | - | chr5.2:4791892-4791911 | MS.gene09966:intron | 45.0% | |
| GCTATTCCTGATAAGCTACG+AGG | - | chr5.2:4791125-4791144 | MS.gene09966:CDS | 45.0% | |
| GGACTGTCACAGACTTTCAT+AGG | - | chr5.2:4793978-4793997 | MS.gene09966:intron | 45.0% | |
| GTCTCCTCTCATTGCAGAAA+GGG | - | chr5.2:4792829-4792848 | MS.gene09966:intron | 45.0% | |
| TGACTGAAGAGGAGATGAAG+AGG | - | chr5.2:4792140-4792159 | MS.gene09966:intron | 45.0% | |
| TGAGGAGAGTAACGAACCAA+AGG | + | chr5.2:4791338-4791357 | None:intergenic | 45.0% | |
| TGAGTTAGGTCCAAACCATC+TGG | + | chr5.2:4790954-4790973 | None:intergenic | 45.0% | |
| TGGATTGCTAGATGAGATGC+AGG | - | chr5.2:4794181-4794200 | MS.gene09966:intron | 45.0% | |
| TGGGTCGAGAAAGGAGAAAT+GGG | + | chr5.2:4792697-4792716 | None:intergenic | 45.0% | |
| TGTCTCCTCTCATTGCAGAA+AGG | - | chr5.2:4792828-4792847 | MS.gene09966:intron | 45.0% | |
| TGTTCGAGCCAAGTTTGCAA+CGG | + | chr5.2:4791981-4792000 | None:intergenic | 45.0% | |
| TTAAGGACTGTGAACGATGC+TGG | + | chr5.2:4792674-4792693 | None:intergenic | 45.0% | |
| TTCTTTGCGTCTGTAGACGA+CGG | - | chr5.2:4792926-4792945 | MS.gene09966:intron | 45.0% | |
| ! | ATCTTGTTGTGGCGTTTGGT+TGG | + | chr5.2:4791017-4791036 | None:intergenic | 45.0% |
| ! | CTTGGTAGAGGAGGTGTATT+GGG | - | chr5.2:4792100-4792119 | MS.gene09966:intron | 45.0% |
| ! | GACTAGGTCTTGTGTTAGGA+TGG | + | chr5.2:4791084-4791103 | None:intergenic | 45.0% |
| ! | TGAGATCTTGTTGTGGCGTT+TGG | + | chr5.2:4791021-4791040 | None:intergenic | 45.0% |
| ! | TGGTCAAGCATTAGTGTTGG+AGG | - | chr5.2:4791815-4791834 | MS.gene09966:intron | 45.0% |
| !! | ATTAGTTTGCCTGCACAGCT+TGG | - | chr5.2:4792082-4792101 | MS.gene09966:intron | 45.0% |
| !! | CAATGGTGGATCGAATGTAG+TGG | + | chr5.2:4792717-4792736 | None:intergenic | 45.0% |
| !! | CATTGGTTCGGGCACTAATT+TGG | - | chr5.2:4791442-4791461 | MS.gene09966:intron | 45.0% |
| !! | GAAATGTAGTGGTGGATCGA+CGG | + | chr5.2:4792761-4792780 | None:intergenic | 45.0% |
| !! | GGTATTGACTAATCCTCCGA+CGG | - | chr5.2:4793132-4793151 | MS.gene09966:intron | 45.0% |
| !! | GTCGGAGGATTAGTCAATAC+CGG | + | chr5.2:4793133-4793152 | None:intergenic | 45.0% |
| !! | TATCAGGAATAGCGTCGACA+AGG | + | chr5.2:4791118-4791137 | None:intergenic | 45.0% |
| !!! | ATTTTAAGTTCGCGGTGCTG+AGG | + | chr5.2:4792795-4792814 | None:intergenic | 45.0% |
| AAGATCTCAGTGATCGGTGC+AGG | - | chr5.2:4791032-4791051 | MS.gene09966:CDS | 50.0% | |
| AAGGGCTTTCTCCAACGTTC+AGG | - | chr5.2:4792847-4792866 | MS.gene09966:intron | 50.0% | |
| AGAGAACGACGAAAGAGGAC+CGG | + | chr5.2:4792625-4792644 | None:intergenic | 50.0% | |
| AGATGAGATGCAGGTGAGTG+AGG | - | chr5.2:4794190-4794209 | MS.gene09966:intron | 50.0% | |
| AGGAGTGGTATTGCCACCTA+TGG | + | chr5.2:4792435-4792454 | None:intergenic | 50.0% | |
| AGTGGTATTGCCACCTATGG+TGG | + | chr5.2:4792432-4792451 | None:intergenic | 50.0% | |
| ATTGACTAATCCTCCGACGG+AGG | - | chr5.2:4793135-4793154 | MS.gene09966:intron | 50.0% | |
| CACAGAGAGAACGACGAAAG+AGG | + | chr5.2:4792630-4792649 | None:intergenic | 50.0% | |
| CGGAGAGAGGAGAAATGTAG+TGG | + | chr5.2:4792772-4792791 | None:intergenic | 50.0% | |
| CTGAATAATCAGTGGAGGCC+TGG | + | chr5.2:4791202-4791221 | None:intergenic | 50.0% | |
| GATGAGATGCAGGTGAGTGA+GGG | - | chr5.2:4794191-4794210 | MS.gene09966:intron | 50.0% | |
| GGAGAGTAACGAACCAAAGG+TGG | + | chr5.2:4791335-4791354 | None:intergenic | 50.0% | |
| GGTACACTTCTTGGGCCATA+GGG | - | chr5.2:4791951-4791970 | MS.gene09966:intron | 50.0% | |
| GGTGAGTGAGGGAACATTTC+TGG | - | chr5.2:4794202-4794221 | MS.gene09966:intron | 50.0% | |
| GGTTCATCATTGGGACCAGA+TGG | - | chr5.2:4790936-4790955 | MS.gene09966:CDS | 50.0% | |
| GTGACAGTTCAGTGGCACTA+TGG | - | chr5.2:4791795-4791814 | MS.gene09966:intron | 50.0% | |
| GTGGGTCGAGAAAGGAGAAA+TGG | + | chr5.2:4792698-4792717 | None:intergenic | 50.0% | |
| TAAGCTACGAGGTGAGATGC+TGG | - | chr5.2:4791136-4791155 | MS.gene09966:CDS | 50.0% | |
| TAGTGCCCGAACCAATGACT+CGG | + | chr5.2:4791439-4791458 | None:intergenic | 50.0% | |
| TTGACTAATCCTCCGACGGA+GGG | - | chr5.2:4793136-4793155 | MS.gene09966:intron | 50.0% | |
| TTGTGGCGTTTGGTTGGAGA+AGG | + | chr5.2:4791011-4791030 | None:intergenic | 50.0% | |
| TTTGGTTGGAGAAGGAGGTG+AGG | + | chr5.2:4791003-4791022 | None:intergenic | 50.0% | |
| ! | AGGGTACTCCGTTGCAAACT+TGG | - | chr5.2:4791970-4791989 | MS.gene09966:intron | 50.0% |
| ! | CGTCGACTAGGTCTTGTGTT+AGG | + | chr5.2:4791088-4791107 | None:intergenic | 50.0% |
| ! | CTCCAACCGAGTCATTGGTT+CGG | - | chr5.2:4791430-4791449 | MS.gene09966:intron | 50.0% |
| ! | GCATACATAGTGGGGGAACA+CGG | - | chr5.2:4791773-4791792 | MS.gene09966:intron | 50.0% |
| ! | GCTTGGTAGAGGAGGTGTAT+TGG | - | chr5.2:4792099-4792118 | MS.gene09966:intron | 50.0% |
| ! | GTTTGCAACGGAGTACCCTA+TGG | + | chr5.2:4791969-4791988 | None:intergenic | 50.0% |
| !! | AACCAATGACTCGGTTGGAG+GGG | + | chr5.2:4791430-4791449 | None:intergenic | 50.0% |
| !! | CGAATGTAGTGGGTCGAGAA+AGG | + | chr5.2:4792706-4792725 | None:intergenic | 50.0% |
| !! | GAACCAATGACTCGGTTGGA+GGG | + | chr5.2:4791431-4791450 | None:intergenic | 50.0% |
| !! | GGAGGATTAGTCAATACCGG+CGG | + | chr5.2:4793130-4793149 | None:intergenic | 50.0% |
| !! | TCCAACCGAGTCATTGGTTC+GGG | - | chr5.2:4791431-4791450 | MS.gene09966:intron | 50.0% |
| ACCTCTGCATCGTCACTGCT+GGG | - | chr5.2:4791237-4791256 | MS.gene09966:intron | 55.0% | |
| AGGAGGTGAGGCATGTTGGA+TGG | + | chr5.2:4790991-4791010 | None:intergenic | 55.0% | |
| GAGAAGGAGGTGAGGCATGT+TGG | + | chr5.2:4790995-4791014 | None:intergenic | 55.0% | |
| GATCTTAGTGCGGGGAAGGA+AGG | + | chr5.2:4791180-4791199 | None:intergenic | 55.0% | |
| GGAACACGGTGACAGTTCAG+TGG | - | chr5.2:4791787-4791806 | MS.gene09966:intron | 55.0% | |
| GGGTACACTTCTTGGGCCAT+AGG | - | chr5.2:4791950-4791969 | MS.gene09966:intron | 55.0% | |
| TCGGTCAAACTACCCTCCGT+CGG | + | chr5.2:4793151-4793170 | None:intergenic | 55.0% | |
| TGGAGGCCTGGATCTTAGTG+CGG | + | chr5.2:4791190-4791209 | None:intergenic | 55.0% | |
| TGGCGTTTGGTTGGAGAAGG+AGG | + | chr5.2:4791008-4791027 | None:intergenic | 55.0% | |
| TTCCCCTCCAACCGAGTCAT+TGG | - | chr5.2:4791425-4791444 | MS.gene09966:intron | 55.0% | |
| TTGCCTGCACAGCTTGGTAG+AGG | - | chr5.2:4792088-4792107 | MS.gene09966:intron | 55.0% | |
| ! | ACACGGCGGTGATAGTGATG+AGG | + | chr5.2:4792582-4792601 | None:intergenic | 55.0% |
| ! | CAAGGACAAGCTCGTCGACT+AGG | + | chr5.2:4791100-4791119 | None:intergenic | 55.0% |
| ! | TTAAGTTCGCGGTGCTGAGG+CGG | + | chr5.2:4792792-4792811 | None:intergenic | 55.0% |
| !! | ATGTAGTGGTGGATCGACGG+CGG | + | chr5.2:4792758-4792777 | None:intergenic | 55.0% |
| !! | CGAACCAATGACTCGGTTGG+AGG | + | chr5.2:4791432-4791451 | None:intergenic | 55.0% |
| CCTCCTCTACCAAGCTGTGC+AGG | + | chr5.2:4792094-4792113 | None:intergenic | 60.0% | |
| CCTCTGCATCGTCACTGCTG+GGG | - | chr5.2:4791238-4791257 | MS.gene09966:intron | 60.0% | |
| CCTGCACAGCTTGGTAGAGG+AGG | - | chr5.2:4792091-4792110 | MS.gene09966:intron | 60.0% | |
| CCTGGATCTTAGTGCGGGGA+AGG | + | chr5.2:4791184-4791203 | None:intergenic | 60.0% | |
| CCTTCCCCGCACTAAGATCC+AGG | - | chr5.2:4791181-4791200 | MS.gene09966:intron | 60.0% | |
| CGACGAAAGAGGACCGGTGT+TGG | + | chr5.2:4792619-4792638 | None:intergenic | 60.0% | |
| CGGTGCAGGCAACGTAGGAA+TGG | - | chr5.2:4791046-4791065 | MS.gene09966:CDS | 60.0% | |
| CTTAGTGCGGGGAAGGAAGG+CGG | + | chr5.2:4791177-4791196 | None:intergenic | 60.0% | |
| GACCTCTGCATCGTCACTGC+TGG | - | chr5.2:4791236-4791255 | MS.gene09966:intron | 60.0% | |
| GAGGCCTGGATCTTAGTGCG+GGG | + | chr5.2:4791188-4791207 | None:intergenic | 60.0% | |
| GCTGGGGCTCGCCAGATTAA+TGG | - | chr5.2:4791254-4791273 | MS.gene09966:intron | 60.0% | |
| GGAGGCCTGGATCTTAGTGC+GGG | + | chr5.2:4791189-4791208 | None:intergenic | 60.0% | |
| GTCAAACTACCCTCCGTCGG+AGG | + | chr5.2:4793148-4793167 | None:intergenic | 60.0% | |
| GTGATCGGTGCAGGCAACGT+AGG | - | chr5.2:4791041-4791060 | MS.gene09966:CDS | 60.0% | |
| GTTGTGACTGTAGACGCCGC+CGG | - | chr5.2:4793111-4793130 | MS.gene09966:intron | 60.0% | |
| ! | CGAAAGAGGACCGGTGTTGG+CGG | + | chr5.2:4792616-4792635 | None:intergenic | 60.0% |
| !! | GCCCGAACCAATGACTCGGT+TGG | + | chr5.2:4791435-4791454 | None:intergenic | 60.0% |
| CCCCAGCAGTGACGATGCAG+AGG | + | chr5.2:4791241-4791260 | None:intergenic | 65.0% | |
| CCTGAAGCCTGCGACGTCGA+AGG | + | chr5.2:4793190-4793209 | None:intergenic | 65.0% | |
| CCTTCGACGTCGCAGGCTTC+AGG | - | chr5.2:4793187-4793206 | MS.gene09966:intron | 65.0% | |
| TGACCCATCGCCGCCAACAC+CGG | - | chr5.2:4792603-4792622 | MS.gene09966:CDS | 65.0% | |
| TGGCGGCGATGGGTCAGACA+CGG | + | chr5.2:4792599-4792618 | None:intergenic | 65.0% | |
| AGTGCGGGGAAGGAAGGCGG+CGG | + | chr5.2:4791174-4791193 | None:intergenic | 70.0% | |
| CGGCGATGGGTCAGACACGG+CGG | + | chr5.2:4792596-4792615 | None:intergenic | 70.0% | |
| GAGGAGGCCTTCGACGTCGC+AGG | - | chr5.2:4793180-4793199 | MS.gene09966:intron | 70.0% | |
| GGTGGATCGACGGCGGAGAG+CGG | + | chr5.2:4792751-4792770 | None:intergenic | 70.0% | |
| !! | AGGACCGGTGTTGGCGGCGA+TGG | + | chr5.2:4792610-4792629 | None:intergenic | 70.0% |
| !! | GGACCGGTGTTGGCGGCGAT+GGG | + | chr5.2:4792609-4792628 | None:intergenic | 70.0% |
| CGGCGACGGCGGTGCAATGG+TGG | + | chr5.2:4792731-4792750 | None:intergenic | 75.0% | |
| GAGCGGCGACGGCGGTGCAA+TGG | + | chr5.2:4792734-4792753 | None:intergenic | 75.0% | |
| TCGACGGCGGAGAGCGGCGA+CGG | + | chr5.2:4792745-4792764 | None:intergenic | 75.0% | |
| ! | CGCGGTGCTGAGGCGGAGAG+AGG | + | chr5.2:4792785-4792804 | None:intergenic | 75.0% |
| ! | ACGGCGGAGAGCGGCGACGG+CGG | + | chr5.2:4792742-4792761 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 4790918 | 4795877 | 4790918 | ID=MS.gene09966 |
| chr5.2 | mRNA | 4790918 | 4795877 | 4790918 | ID=MS.gene09966.t1;Parent=MS.gene09966 |
| chr5.2 | exon | 4795269 | 4795877 | 4795269 | ID=MS.gene09966.t1.exon1;Parent=MS.gene09966.t1 |
| chr5.2 | CDS | 4795269 | 4795877 | 4795269 | ID=cds.MS.gene09966.t1;Parent=MS.gene09966.t1 |
| chr5.2 | exon | 4794587 | 4795022 | 4794587 | ID=MS.gene09966.t1.exon2;Parent=MS.gene09966.t1 |
| chr5.2 | CDS | 4794587 | 4795022 | 4794587 | ID=cds.MS.gene09966.t1;Parent=MS.gene09966.t1 |
| chr5.2 | exon | 4793927 | 4793949 | 4793927 | ID=MS.gene09966.t1.exon3;Parent=MS.gene09966.t1 |
| chr5.2 | CDS | 4793927 | 4793949 | 4793927 | ID=cds.MS.gene09966.t1;Parent=MS.gene09966.t1 |
| chr5.2 | exon | 4793770 | 4793853 | 4793770 | ID=MS.gene09966.t1.exon4;Parent=MS.gene09966.t1 |
| chr5.2 | CDS | 4793770 | 4793853 | 4793770 | ID=cds.MS.gene09966.t1;Parent=MS.gene09966.t1 |
| chr5.2 | exon | 4793587 | 4793671 | 4793587 | ID=MS.gene09966.t1.exon5;Parent=MS.gene09966.t1 |
| chr5.2 | CDS | 4793587 | 4793671 | 4793587 | ID=cds.MS.gene09966.t1;Parent=MS.gene09966.t1 |
| chr5.2 | exon | 4792593 | 4792663 | 4792593 | ID=MS.gene09966.t1.exon6;Parent=MS.gene09966.t1 |
| chr5.2 | CDS | 4792593 | 4792663 | 4792593 | ID=cds.MS.gene09966.t1;Parent=MS.gene09966.t1 |
| chr5.2 | exon | 4792358 | 4792451 | 4792358 | ID=MS.gene09966.t1.exon7;Parent=MS.gene09966.t1 |
| chr5.2 | CDS | 4792358 | 4792451 | 4792358 | ID=cds.MS.gene09966.t1;Parent=MS.gene09966.t1 |
| chr5.2 | exon | 4790918 | 4791183 | 4790918 | ID=MS.gene09966.t1.exon8;Parent=MS.gene09966.t1 |
| chr5.2 | CDS | 4790918 | 4791183 | 4790918 | ID=cds.MS.gene09966.t1;Parent=MS.gene09966.t1 |
| Gene Sequence |
| Protein sequence |
