Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008352.t1 | XP_003600621.1 | 99.4 | 492 | 3 | 0 | 1 | 492 | 1 | 492 | 8.50E-291 | 1008.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008352.t1 | Q8H191 | 70.0 | 490 | 143 | 3 | 7 | 492 | 8 | 497 | 2.1e-205 | 716.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008352.t1 | G7J7X8 | 99.4 | 492 | 3 | 0 | 1 | 492 | 1 | 492 | 6.1e-291 | 1008.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene038090 | MS.gene008352 | PPI |
MS.gene47679 | MS.gene008352 | PPI |
MS.gene019144 | MS.gene008352 | PPI |
MS.gene46961 | MS.gene008352 | PPI |
MS.gene46317 | MS.gene008352 | PPI |
MS.gene22232 | MS.gene008352 | PPI |
MS.gene008352 | MS.gene92026 | PPI |
MS.gene008352 | MS.gene017025 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008352.t1 | MTR_3g064370 | 99.390 | 492 | 3 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1019 |
MS.gene008352.t1 | MTR_3g064370 | 99.518 | 415 | 2 | 0 | 78 | 492 | 1 | 415 | 0.0 | 863 |
MS.gene008352.t1 | MTR_3g064370 | 99.486 | 389 | 2 | 0 | 1 | 389 | 1 | 389 | 0.0 | 806 |
MS.gene008352.t1 | MTR_5g090300 | 64.431 | 492 | 171 | 1 | 1 | 492 | 1 | 488 | 0.0 | 634 |
MS.gene008352.t1 | MTR_3g449620 | 64.059 | 473 | 168 | 1 | 20 | 492 | 20 | 490 | 0.0 | 619 |
MS.gene008352.t1 | MTR_1g023510 | 33.925 | 507 | 247 | 16 | 15 | 454 | 856 | 1341 | 3.53e-66 | 232 |
MS.gene008352.t1 | MTR_3g113170 | 34.755 | 469 | 251 | 14 | 30 | 454 | 883 | 1340 | 7.23e-65 | 228 |
MS.gene008352.t1 | MTR_3g113170 | 34.755 | 469 | 251 | 14 | 30 | 454 | 883 | 1340 | 7.43e-65 | 228 |
MS.gene008352.t1 | MTR_6g084700 | 33.261 | 463 | 269 | 12 | 29 | 464 | 221 | 670 | 3.25e-56 | 201 |
MS.gene008352.t1 | MTR_3g055090 | 31.236 | 445 | 272 | 12 | 29 | 454 | 160 | 589 | 6.13e-54 | 193 |
MS.gene008352.t1 | MTR_1g050535 | 30.892 | 437 | 268 | 12 | 44 | 460 | 225 | 647 | 1.78e-49 | 182 |
MS.gene008352.t1 | MTR_1g050535 | 30.892 | 437 | 268 | 12 | 44 | 460 | 225 | 647 | 1.85e-49 | 182 |
MS.gene008352.t1 | MTR_8g464450 | 30.337 | 445 | 276 | 13 | 29 | 454 | 163 | 592 | 4.41e-43 | 163 |
MS.gene008352.t1 | MTR_5g087920 | 59.649 | 114 | 46 | 0 | 280 | 393 | 12 | 125 | 1.71e-39 | 140 |
MS.gene008352.t1 | MTR_3g033000 | 25.727 | 447 | 283 | 12 | 53 | 474 | 33 | 455 | 1.42e-26 | 112 |
MS.gene008352.t1 | MTR_3g033000 | 24.474 | 380 | 239 | 11 | 53 | 407 | 33 | 389 | 4.63e-17 | 83.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008352.t1 | AT1G65840 | 70.000 | 490 | 143 | 3 | 7 | 492 | 8 | 497 | 0.0 | 719 |
MS.gene008352.t1 | AT2G43020 | 65.880 | 466 | 157 | 1 | 27 | 492 | 27 | 490 | 0.0 | 627 |
MS.gene008352.t1 | AT3G59050 | 63.617 | 470 | 166 | 1 | 23 | 492 | 24 | 488 | 0.0 | 622 |
MS.gene008352.t1 | AT4G16310 | 33.266 | 496 | 243 | 17 | 30 | 454 | 620 | 1098 | 6.54e-63 | 222 |
MS.gene008352.t1 | AT4G16310 | 33.266 | 496 | 243 | 17 | 30 | 454 | 620 | 1098 | 6.54e-63 | 222 |
MS.gene008352.t1 | AT4G16310 | 33.266 | 496 | 243 | 17 | 30 | 454 | 620 | 1098 | 6.54e-63 | 222 |
MS.gene008352.t1 | AT4G16310 | 33.266 | 496 | 243 | 17 | 30 | 454 | 620 | 1098 | 6.54e-63 | 222 |
MS.gene008352.t1 | AT4G16310 | 33.266 | 496 | 243 | 17 | 30 | 454 | 620 | 1098 | 6.54e-63 | 222 |
MS.gene008352.t1 | AT3G10390 | 32.522 | 452 | 272 | 12 | 24 | 456 | 181 | 618 | 2.66e-58 | 206 |
MS.gene008352.t1 | AT3G10390 | 32.522 | 452 | 272 | 12 | 24 | 456 | 233 | 670 | 6.92e-58 | 206 |
MS.gene008352.t1 | AT3G10390 | 32.522 | 452 | 272 | 12 | 24 | 456 | 181 | 618 | 7.52e-58 | 206 |
MS.gene008352.t1 | AT3G10390 | 32.522 | 452 | 272 | 12 | 24 | 456 | 233 | 670 | 1.22e-57 | 206 |
MS.gene008352.t1 | AT1G62830 | 32.379 | 454 | 271 | 12 | 28 | 459 | 266 | 705 | 3.24e-54 | 195 |
MS.gene008352.t1 | AT3G13682 | 31.982 | 444 | 270 | 12 | 29 | 454 | 161 | 590 | 4.15e-46 | 171 |
MS.gene008352.t1 | AT4G29720 | 24.953 | 529 | 292 | 14 | 30 | 460 | 7 | 528 | 7.27e-34 | 134 |
MS.gene008352.t1 | AT5G13700 | 26.841 | 421 | 259 | 11 | 53 | 451 | 30 | 423 | 8.06e-29 | 119 |
Find 130 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGGATTGCCTGTTGCTTTA+TGG | 0.106802 | 3.1:-53774702 | None:intergenic |
AGAAACTTTCAAGAGAATTT+TGG | 0.193423 | 3.1:+53772052 | MS.gene008352:CDS |
GCTCCGTCAGTTATAGTTAT+TGG | 0.214197 | 3.1:+53771215 | MS.gene008352:CDS |
GGCTCCATTGATACGTTGCC+TGG | 0.228369 | 3.1:+53771686 | MS.gene008352:CDS |
AGCTTATTCTGCTGGGGTTA+TGG | 0.271739 | 3.1:+53775569 | MS.gene008352:CDS |
AAAACTGTCAAAGATATCTT+TGG | 0.275839 | 3.1:+53775598 | MS.gene008352:CDS |
TTGGCCCGACGTAGAACTTA+TGG | 0.280962 | 3.1:+53774633 | MS.gene008352:CDS |
CCCTTGGGTAATATATTCTT+TGG | 0.292005 | 3.1:+53775504 | MS.gene008352:CDS |
CAATCCGGTTCTTGTTTATA+TGG | 0.326429 | 3.1:+53774717 | MS.gene008352:CDS |
TTTGCAAGAGCATTTATAAC+TGG | 0.327061 | 3.1:-53773856 | None:intergenic |
GTGCATGGAGCTTATTCTGC+TGG | 0.342809 | 3.1:+53775561 | MS.gene008352:CDS |
GTTTCTGCAATTTCAGATCT+TGG | 0.343293 | 3.1:+53774565 | MS.gene008352:CDS |
TGAAATTCGACAAAGTGTTT+TGG | 0.349619 | 3.1:+53774614 | MS.gene008352:CDS |
GCCTATCTCGTGACTCCAAT+AGG | 0.353598 | 3.1:-53771416 | None:intergenic |
ATTTGGTCAGGTCACCCTAT+TGG | 0.353726 | 3.1:+53771401 | MS.gene008352:intron |
CTCAATCTCCATAAAGCAAC+AGG | 0.361876 | 3.1:+53774694 | MS.gene008352:CDS |
GTTATTGGTGCTGGAATCTC+AGG | 0.368456 | 3.1:+53771230 | MS.gene008352:CDS |
GAGTAACAACCAAGAGAGTT+TGG | 0.370394 | 3.1:-53775432 | None:intergenic |
GCTATCATAACTGTTCCTAT+TGG | 0.374869 | 3.1:+53774490 | MS.gene008352:CDS |
ATTGTAGCCACTGGATATCT+TGG | 0.378279 | 3.1:-53774419 | None:intergenic |
CATGTACTCTCTGGTGGTCA+TGG | 0.381933 | 3.1:+53773811 | MS.gene008352:CDS |
GATATCCAGTGGCTACAATA+AGG | 0.385658 | 3.1:+53774423 | MS.gene008352:CDS |
GTAATTACCTTTCCAGATCA+TGG | 0.391699 | 3.1:-53771755 | None:intergenic |
ATTCATACTGACTACTCGTT+TGG | 0.393779 | 3.1:+53771450 | MS.gene008352:CDS |
TGGCCCGACGTAGAACTTAT+GGG | 0.396075 | 3.1:+53774634 | MS.gene008352:CDS |
TATACCATTGCAGCACTTCA+TGG | 0.399265 | 3.1:-53773112 | None:intergenic |
TCAGTATCTTGTGTCACATT+GGG | 0.401037 | 3.1:+53775401 | MS.gene008352:CDS |
TCTGCTAGACATGAAACATT+AGG | 0.401567 | 3.1:+53775657 | MS.gene008352:CDS |
TGCATGGAGCTTATTCTGCT+GGG | 0.408422 | 3.1:+53775562 | MS.gene008352:CDS |
CACGAGGCTCCCATGTCAAC+TGG | 0.412257 | 3.1:-53771477 | None:intergenic |
TGGTTGTTACTCTTATGATT+TGG | 0.416643 | 3.1:+53775443 | MS.gene008352:CDS |
CTGACGGAGCTGGTCTTTGT+TGG | 0.419602 | 3.1:-53771202 | None:intergenic |
CTCTGGTGGTCATGGGCTCA+TGG | 0.428377 | 3.1:+53773819 | MS.gene008352:CDS |
CTAACCATCGAGAAAATTGT+TGG | 0.435965 | 3.1:-53770237 | None:intergenic |
ACTTTCCTCTTCAAATTTCG+AGG | 0.438614 | 3.1:+53775685 | MS.gene008352:CDS |
ACCTTCCAATCAGGAAGTCT+TGG | 0.440787 | 3.1:-53774544 | None:intergenic |
TTCACTGAAAACCTGGGATC+AGG | 0.441813 | 3.1:+53773178 | MS.gene008352:CDS |
AAACTGTCAAAGATATCTTT+GGG | 0.441972 | 3.1:+53775599 | MS.gene008352:CDS |
TTGAACCAAGACTTCCTGAT+TGG | 0.448952 | 3.1:+53774539 | MS.gene008352:CDS |
TGATTACTTTCCAGGCTACA+TGG | 0.454213 | 3.1:+53771642 | MS.gene008352:intron |
AAAATAGCCACATGCATAAG+AGG | 0.456214 | 3.1:-53774671 | None:intergenic |
CGATTTCAATTGTGCTGGAT+AGG | 0.458980 | 3.1:+53772976 | MS.gene008352:CDS |
CCTATCTCGTGACTCCAATA+GGG | 0.459404 | 3.1:-53771415 | None:intergenic |
GGAACAGATCCAAACTCTCT+TGG | 0.461138 | 3.1:+53775423 | MS.gene008352:CDS |
GACAAGCTTCGTGCACCCTT+GGG | 0.461187 | 3.1:+53775489 | MS.gene008352:CDS |
TGACAAGCTTCGTGCACCCT+TGG | 0.461200 | 3.1:+53775488 | MS.gene008352:CDS |
CCGTCTGTTGTGGAACTTGA+TGG | 0.462959 | 3.1:-53772016 | None:intergenic |
TCAGTTATAGTTATTGGTGC+TGG | 0.465534 | 3.1:+53771221 | MS.gene008352:CDS |
TTGTTTATATGGCAGCTGGC+AGG | 0.468868 | 3.1:+53774728 | MS.gene008352:CDS |
GCTCCATTGATACGTTGCCT+GGG | 0.470172 | 3.1:+53771687 | MS.gene008352:CDS |
ATTGCAGAAACCTTCCAATC+AGG | 0.470713 | 3.1:-53774553 | None:intergenic |
TGAAGCGATTTCAATTGTGC+TGG | 0.471283 | 3.1:+53772971 | MS.gene008352:CDS |
GTTTGGTTGTCCAGTTGACA+TGG | 0.475397 | 3.1:+53771467 | MS.gene008352:CDS |
TGTCTTATATGACCATGATC+TGG | 0.483301 | 3.1:+53771743 | MS.gene008352:CDS |
AGCTATGAGCTTAGACAACC+AGG | 0.487346 | 3.1:+53775533 | MS.gene008352:CDS |
CAACAGACGGTCATTGAAGT+TGG | 0.490041 | 3.1:+53772029 | MS.gene008352:CDS |
TTCAGTATCTTGTGTCACAT+TGG | 0.491990 | 3.1:+53775400 | MS.gene008352:CDS |
CCATAAAGCAACAGGCAATC+CGG | 0.494292 | 3.1:+53774702 | MS.gene008352:CDS |
GTTCTTGTTTATATGGCAGC+TGG | 0.495748 | 3.1:+53774724 | MS.gene008352:CDS |
AGCCCCAGGCAACGTATCAA+TGG | 0.496497 | 3.1:-53771690 | None:intergenic |
TGGGTAATATATTCTTTGGC+GGG | 0.496885 | 3.1:+53775508 | MS.gene008352:CDS |
TTGGGTAATATATTCTTTGG+CGG | 0.496991 | 3.1:+53775507 | MS.gene008352:CDS |
CATTACCTTATTGTAGCCAC+TGG | 0.499731 | 3.1:-53774428 | None:intergenic |
GCTGCCATATAAACAAGAAC+CGG | 0.501410 | 3.1:-53774721 | None:intergenic |
CTTAATCTCTACCTTAGTTG+TGG | 0.501774 | 3.1:-53773002 | None:intergenic |
ATGTACTCTCTGGTGGTCAT+GGG | 0.512052 | 3.1:+53773812 | MS.gene008352:CDS |
CAATAAGGTAATGGTTACCT+TGG | 0.517187 | 3.1:+53774438 | MS.gene008352:CDS |
TAAGGTAATGGTTACCTTGG+AGG | 0.519734 | 3.1:+53774441 | MS.gene008352:CDS |
CCCTATTGGAGTCACGAGAT+AGG | 0.521189 | 3.1:+53771415 | MS.gene008352:CDS |
TCAGAAACTGAAATGTCCTC+AGG | 0.524543 | 3.1:-53772951 | None:intergenic |
CTTACTGGCTCACAAGCATC+AGG | 0.525314 | 3.1:-53774826 | None:intergenic |
ATATGATTTCACTGAAAACC+TGG | 0.525756 | 3.1:+53773171 | MS.gene008352:CDS |
TTATAGGAACATGTACTCTC+TGG | 0.527260 | 3.1:+53773802 | MS.gene008352:intron |
TGTTACTCTTATGATTTGGT+TGG | 0.527321 | 3.1:+53775447 | MS.gene008352:CDS |
AATGGGACTTGCCTGATCCC+AGG | 0.528379 | 3.1:-53773189 | None:intergenic |
GCAATTTCAGATCTTGGTGT+AGG | 0.529421 | 3.1:+53774571 | MS.gene008352:CDS |
ACCAAGACTTCCTGATTGGA+AGG | 0.533754 | 3.1:+53774543 | MS.gene008352:CDS |
ATATATGCAGAATGGAAGCT+TGG | 0.534236 | 3.1:+53773132 | MS.gene008352:CDS |
TTGATATACGCTTGAACCAC+AGG | 0.534596 | 3.1:+53773884 | MS.gene008352:CDS |
AACTGCAGACAGGGAAAGTG+AGG | 0.534952 | 3.1:+53772919 | MS.gene008352:intron |
GACAACCAGGGGTCTGTGCA+TGG | 0.535236 | 3.1:+53775546 | MS.gene008352:CDS |
CAGTGGCTACAATAAGGTAA+TGG | 0.536411 | 3.1:+53774429 | MS.gene008352:CDS |
AAGCTCCATGCACAGACCCC+TGG | 0.544046 | 3.1:-53775551 | None:intergenic |
ATACCATTGCAGCACTTCAT+GGG | 0.544743 | 3.1:-53773111 | None:intergenic |
TGGATAGGCATCCACAACTA+AGG | 0.553526 | 3.1:+53772991 | MS.gene008352:CDS |
GTCTAGCAGAAACTTGAGAC+AGG | 0.561810 | 3.1:-53775644 | None:intergenic |
CTCCATTGATACGTTGCCTG+GGG | 0.562679 | 3.1:+53771688 | MS.gene008352:CDS |
GCCAAAGAATATATTACCCA+AGG | 0.564252 | 3.1:-53775505 | None:intergenic |
TTTCCCATGAAGTGCTGCAA+TGG | 0.564817 | 3.1:+53773108 | MS.gene008352:CDS |
TGATTTGGTTGGAAAATCAA+CGG | 0.567264 | 3.1:+53775458 | MS.gene008352:CDS |
ACTTCAATGACCGTCTGTTG+TGG | 0.569808 | 3.1:-53772026 | None:intergenic |
ACACCCATAAGTTCTACGTC+GGG | 0.570414 | 3.1:-53774637 | None:intergenic |
CAGTATCTTGTGTCACATTG+GGG | 0.571869 | 3.1:+53775402 | MS.gene008352:CDS |
CATATCCTCGAAATTTGAAG+AGG | 0.574076 | 3.1:-53775690 | None:intergenic |
GAGTCACGAGATAGGCTTGG+TGG | 0.582656 | 3.1:+53771423 | MS.gene008352:CDS |
TTTGGTTGTCCAGTTGACAT+GGG | 0.582802 | 3.1:+53771468 | MS.gene008352:CDS |
AAAGTTTCTGCCATCCTCCA+AGG | 0.584080 | 3.1:-53774455 | None:intergenic |
GCAACGTATCAATGGAGCCA+AGG | 0.586871 | 3.1:-53771682 | None:intergenic |
TACGATATAGTGTAAGCCCC+AGG | 0.596492 | 3.1:-53771704 | None:intergenic |
TTGGAGTCACGAGATAGGCT+TGG | 0.598997 | 3.1:+53771420 | MS.gene008352:CDS |
GGTCATGGGCTCATGGTGCA+AGG | 0.600222 | 3.1:+53773826 | MS.gene008352:CDS |
CCTCATCAGATAACTTCTCA+AGG | 0.605882 | 3.1:-53774762 | None:intergenic |
ATAACTATAACTGACGGAGC+TGG | 0.605968 | 3.1:-53771212 | None:intergenic |
GCTCCTACCTCTTATGCATG+TGG | 0.608376 | 3.1:+53774664 | MS.gene008352:CDS |
TATATGACCATGATCTGGAA+AGG | 0.611366 | 3.1:+53771748 | MS.gene008352:CDS |
CCTTGAGAAGTTATCTGATG+AGG | 0.611507 | 3.1:+53774762 | MS.gene008352:CDS |
GCATGGAGCTTATTCTGCTG+GGG | 0.612462 | 3.1:+53775563 | MS.gene008352:CDS |
GCAATGGTATATATGCAGAA+TGG | 0.613146 | 3.1:+53773124 | MS.gene008352:CDS |
TGAAATCATATCGGCATCAG+CGG | 0.615022 | 3.1:-53773159 | None:intergenic |
CAACGTATCAATGGAGCCAA+GGG | 0.616610 | 3.1:-53771681 | None:intergenic |
TAGCCACATGCATAAGAGGT+AGG | 0.626496 | 3.1:-53774667 | None:intergenic |
GTAATGGTTACCTTGGAGGA+TGG | 0.627124 | 3.1:+53774445 | MS.gene008352:CDS |
TTATTGGTGCTGGAATCTCA+GGG | 0.628361 | 3.1:+53771231 | MS.gene008352:CDS |
TATGTTAACTTCAGGCAACA+AGG | 0.628734 | 3.1:+53773083 | MS.gene008352:intron |
CCATCAAGTTCCACAACAGA+CGG | 0.631279 | 3.1:+53772016 | MS.gene008352:CDS |
TAGGAACATGTACTCTCTGG+TGG | 0.636418 | 3.1:+53773805 | MS.gene008352:intron |
AACACCCATAAGTTCTACGT+CGG | 0.637845 | 3.1:-53774638 | None:intergenic |
TATGATTTCACTGAAAACCT+GGG | 0.639043 | 3.1:+53773172 | MS.gene008352:CDS |
AGTTTGTAATGAGAATCCCT+TGG | 0.647576 | 3.1:+53771665 | MS.gene008352:CDS |
GGGTAATATATTCTTTGGCG+GGG | 0.658846 | 3.1:+53775509 | MS.gene008352:CDS |
CCAAAGAATATATTACCCAA+GGG | 0.659312 | 3.1:-53775504 | None:intergenic |
GCACCAATAACTATAACTGA+CGG | 0.665849 | 3.1:-53771218 | None:intergenic |
CTATGAGCTTAGACAACCAG+GGG | 0.673759 | 3.1:+53775535 | MS.gene008352:CDS |
GCTATGAGCTTAGACAACCA+GGG | 0.687589 | 3.1:+53775534 | MS.gene008352:CDS |
CTTACACTATATCGTACAAG+CGG | 0.701168 | 3.1:+53771711 | MS.gene008352:CDS |
AGTGAGGGATGAGCATCCTG+AGG | 0.703505 | 3.1:+53772935 | MS.gene008352:CDS |
ACTGCAGACAGGGAAAGTGA+GGG | 0.709241 | 3.1:+53772920 | MS.gene008352:intron |
AGGGTGACCAAGATATCCAG+TGG | 0.715107 | 3.1:+53774412 | MS.gene008352:intron |
ACACCTTAAAAGATGCATCG+TGG | 0.717302 | 3.1:-53771274 | None:intergenic |
CAGTTGACATGGGAGCCTCG+TGG | 0.734644 | 3.1:+53771478 | MS.gene008352:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATAAATAATATTAATAA+CGG | - | chr3.1:53772874-53772893 | None:intergenic | 0.0% |
!! | AAAACAAATAATATTAAAAG+GGG | - | chr3.1:53770287-53770306 | None:intergenic | 10.0% |
!! | ATATAACAATAATAACTAAT+AGG | - | chr3.1:53773702-53773721 | None:intergenic | 10.0% |
!!! | CAATATATATTTTTTTTTTG+AGG | - | chr3.1:53774010-53774029 | None:intergenic | 10.0% |
!! | AAATGAAAAACAAAACTAAA+GGG | + | chr3.1:53772451-53772470 | MS.gene008352:intron | 15.0% |
!! | AATATTATAATCCTAAAACA+TGG | - | chr3.1:53770749-53770768 | None:intergenic | 15.0% |
!! | AATTTATTTCATTCATCATT+TGG | + | chr3.1:53771384-53771403 | MS.gene008352:intron | 15.0% |
!! | TAAATGAAAAACAAAACTAA+AGG | + | chr3.1:53772450-53772469 | MS.gene008352:intron | 15.0% |
!! | TATAAAATATTCAAGTCTAT+AGG | - | chr3.1:53770843-53770862 | None:intergenic | 15.0% |
!! | TATACATCAAATAATACAAT+GGG | - | chr3.1:53773209-53773228 | None:intergenic | 15.0% |
!! | TGTAAAATGTTGTTAAAAAT+GGG | + | chr3.1:53775203-53775222 | MS.gene008352:intron | 15.0% |
!! | TTGTAAAATGTTGTTAAAAA+TGG | + | chr3.1:53775202-53775221 | MS.gene008352:intron | 15.0% |
!!! | TTTAACAACATTTTACAAAT+GGG | - | chr3.1:53775200-53775219 | None:intergenic | 15.0% |
!!! | TTTTAAAGATACAGTTAAAT+TGG | + | chr3.1:53774140-53774159 | MS.gene008352:intron | 15.0% |
!!! | TTTTAACAACATTTTACAAA+TGG | - | chr3.1:53775201-53775220 | None:intergenic | 15.0% |
!! | AAAAGAAAGACTAAATAAAG+AGG | - | chr3.1:53771321-53771340 | None:intergenic | 20.0% |
!! | AATGAAAAACAAAACTAAAG+GGG | + | chr3.1:53772452-53772471 | MS.gene008352:intron | 20.0% |
!! | AGATAAAACAAATGAAAGAT+TGG | + | chr3.1:53775169-53775188 | MS.gene008352:intron | 20.0% |
!! | ATATCATGTAATTGTTAATG+AGG | - | chr3.1:53772714-53772733 | None:intergenic | 20.0% |
!! | ATCAACAATAATCTTAAATG+AGG | - | chr3.1:53773306-53773325 | None:intergenic | 20.0% |
!! | ATTTAGAAAACATGTCTTAA+CGG | - | chr3.1:53770490-53770509 | None:intergenic | 20.0% |
!! | CTATACATCAAATAATACAA+TGG | - | chr3.1:53773210-53773229 | None:intergenic | 20.0% |
!! | CTTAAATTAATAATAGTGCT+AGG | - | chr3.1:53770711-53770730 | None:intergenic | 20.0% |
!! | TCAACAATAATCTTAAATGA+GGG | - | chr3.1:53773305-53773324 | None:intergenic | 20.0% |
!! | TCTCATCAAATATATTCAAA+AGG | + | chr3.1:53772409-53772428 | MS.gene008352:intron | 20.0% |
!! | TGAATATATTTGATGAGAAT+TGG | - | chr3.1:53772407-53772426 | None:intergenic | 20.0% |
!! | TTATAATATTATTGCAGTTG+TGG | + | chr3.1:53770759-53770778 | MS.gene008352:intron | 20.0% |
!!! | AAACTCTAGTTTTTTCATAA+TGG | + | chr3.1:53773380-53773399 | MS.gene008352:intron | 20.0% |
!!! | AAATGGTTTTTGATTAATTG+TGG | + | chr3.1:53770506-53770525 | MS.gene008352:intron | 20.0% |
!!! | ACTCAATTAAATTTGCTTTT+AGG | - | chr3.1:53774519-53774538 | None:intergenic | 20.0% |
!!! | AGTTTTTCAAAAGAAATTGA+TGG | + | chr3.1:53775131-53775150 | MS.gene008352:intron | 20.0% |
!!! | ATTTTATTCTGTTAGGTTTA+TGG | + | chr3.1:53772628-53772647 | MS.gene008352:intron | 20.0% |
!!! | GAATTTTTACAATTCACAAA+TGG | + | chr3.1:53772099-53772118 | MS.gene008352:intron | 20.0% |
!!! | GGAATTAATAGCATTTTAAT+TGG | + | chr3.1:53770921-53770940 | MS.gene008352:intron | 20.0% |
!!! | TAAATGAAGGTATAAAAAAC+TGG | + | chr3.1:53773491-53773510 | MS.gene008352:intron | 20.0% |
!!! | TAAGTTGATCTTCTATATAT+TGG | - | chr3.1:53773729-53773748 | None:intergenic | 20.0% |
!!! | TATTGGTTATACTTTTTACA+TGG | + | chr3.1:53773247-53773266 | MS.gene008352:intron | 20.0% |
!!! | TTTTTTGTTGATTTATGTGT+GGG | + | chr3.1:53770344-53770363 | MS.gene008352:intron | 20.0% |
!!! | TTTTTTTGTTGATTTATGTG+TGG | + | chr3.1:53770343-53770362 | MS.gene008352:intron | 20.0% |
! | AAAACTGTCAAAGATATCTT+TGG | + | chr3.1:53775598-53775617 | MS.gene008352:CDS | 25.0% |
! | AAAATGAGGAATATAACCTA+AGG | - | chr3.1:53773644-53773663 | None:intergenic | 25.0% |
! | AAACTGTCAAAGATATCTTT+GGG | + | chr3.1:53775599-53775618 | MS.gene008352:CDS | 25.0% |
! | AATTTCAATGTTGTATCTGA+AGG | + | chr3.1:53771805-53771824 | MS.gene008352:intron | 25.0% |
! | ACGTGTGAAAAAATTATCAT+AGG | - | chr3.1:53773586-53773605 | None:intergenic | 25.0% |
! | ATAATATTAAAAGGGGAAAG+AGG | - | chr3.1:53770280-53770299 | None:intergenic | 25.0% |
! | ATGTAATTGTTAATGAGGTA+TGG | - | chr3.1:53772709-53772728 | None:intergenic | 25.0% |
! | CATAACAGTTAATGATATAC+AGG | - | chr3.1:53771882-53771901 | None:intergenic | 25.0% |
! | GAAAATCATAGATGTATGAT+TGG | + | chr3.1:53774089-53774108 | MS.gene008352:intron | 25.0% |
! | GAATAAATGTAGAACCATTT+AGG | + | chr3.1:53773029-53773048 | MS.gene008352:intron | 25.0% |
! | GAGTATAAAAAAACTACTAC+TGG | - | chr3.1:53771947-53771966 | None:intergenic | 25.0% |
! | GATATAGATAAACATCACTT+AGG | + | chr3.1:53774214-53774233 | MS.gene008352:intron | 25.0% |
! | TAATTGACTATGTTAACTTC+AGG | + | chr3.1:53773075-53773094 | MS.gene008352:intron | 25.0% |
! | TATGAGTCAATAAGTCAATA+AGG | + | chr3.1:53772137-53772156 | MS.gene008352:intron | 25.0% |
! | TATTTGATGTATAGAAACCT+GGG | + | chr3.1:53773216-53773235 | MS.gene008352:intron | 25.0% |
! | TGCATTATAATCATGAACTT+TGG | + | chr3.1:53771565-53771584 | MS.gene008352:intron | 25.0% |
! | TTATACACAAAAATCAGAAG+TGG | - | chr3.1:53771150-53771169 | None:intergenic | 25.0% |
! | TTATTTGATGTATAGAAACC+TGG | + | chr3.1:53773215-53773234 | MS.gene008352:intron | 25.0% |
! | TTTACAAAATGGTCAAAATC+TGG | - | chr3.1:53774380-53774399 | None:intergenic | 25.0% |
!! | AACTCAGATTTTATTCTGTT+AGG | + | chr3.1:53772621-53772640 | MS.gene008352:intron | 25.0% |
!! | AATTGGTTAAAGAAAAGTGT+GGG | - | chr3.1:53772390-53772409 | None:intergenic | 25.0% |
!! | AGAAACTTTCAAGAGAATTT+TGG | + | chr3.1:53772052-53772071 | MS.gene008352:CDS | 25.0% |
!! | AGGAGAGATTTTTCATTATA+TGG | + | chr3.1:53771094-53771113 | MS.gene008352:intron | 25.0% |
!! | CTTCTGATTTTTGTGTATAA+TGG | + | chr3.1:53771150-53771169 | MS.gene008352:intron | 25.0% |
!! | GATTTTGTATACTGAAAAAC+AGG | + | chr3.1:53771074-53771093 | MS.gene008352:intron | 25.0% |
!! | GTTAAGACATGTTTTCTAAA+TGG | + | chr3.1:53770489-53770508 | MS.gene008352:intron | 25.0% |
!! | TTGAGTGTTTGTTAGTTATA+AGG | + | chr3.1:53770900-53770919 | MS.gene008352:intron | 25.0% |
!! | TTGTTTTCTTTTCTCACAAA+TGG | + | chr3.1:53772272-53772291 | MS.gene008352:intron | 25.0% |
!! | TTTTACGTGTATTATGTTAG+TGG | + | chr3.1:53771338-53771357 | MS.gene008352:intron | 25.0% |
!!! | AAAGCAAACTTTTAAGATAC+GGG | - | chr3.1:53775317-53775336 | None:intergenic | 25.0% |
!!! | ATAATTTTTTCACACGTCAT+TGG | + | chr3.1:53773589-53773608 | MS.gene008352:intron | 25.0% |
!!! | CTTGAGGTTTTATACAATTT+AGG | + | chr3.1:53772765-53772784 | MS.gene008352:intron | 25.0% |
!!! | GAAAGCAAACTTTTAAGATA+CGG | - | chr3.1:53775318-53775337 | None:intergenic | 25.0% |
!!! | TAATTTTTTCACACGTCATT+GGG | + | chr3.1:53773590-53773609 | MS.gene008352:intron | 25.0% |
!!! | TAGTTTTTTGAACTTGTTTC+TGG | + | chr3.1:53770595-53770614 | MS.gene008352:intron | 25.0% |
!!! | TATTTTGATTCTGAATCTTG+AGG | + | chr3.1:53772749-53772768 | MS.gene008352:intron | 25.0% |
!!! | TCTAGTTTTTTCATAATGGT+TGG | + | chr3.1:53773384-53773403 | MS.gene008352:intron | 25.0% |
!!! | TTGACTTTTTCTTTTTGTGT+TGG | + | chr3.1:53775366-53775385 | MS.gene008352:intron | 25.0% |
AAACAAATGAAAGATTGGTG+AGG | + | chr3.1:53775174-53775193 | MS.gene008352:intron | 30.0% | |
AAACACTAAGATGTCAATTG+CGG | - | chr3.1:53771036-53771055 | None:intergenic | 30.0% | |
AACTTAAACGAGAGAAAATG+AGG | - | chr3.1:53773658-53773677 | None:intergenic | 30.0% | |
AGTCAATTACACTGATAGAT+TGG | - | chr3.1:53773064-53773083 | None:intergenic | 30.0% | |
ATATGATTTCACTGAAAACC+TGG | + | chr3.1:53773171-53773190 | MS.gene008352:CDS | 30.0% | |
ATCATATGATGACTCACAAA+TGG | + | chr3.1:53772171-53772190 | MS.gene008352:intron | 30.0% | |
ATTGAATTGCAGAAACATGA+TGG | - | chr3.1:53771788-53771807 | None:intergenic | 30.0% | |
ATTGGAACATAAAGCCTAAA+TGG | - | chr3.1:53773046-53773065 | None:intergenic | 30.0% | |
ATTTCATTCATCATTTGGTC+AGG | + | chr3.1:53771389-53771408 | MS.gene008352:intron | 30.0% | |
CCAAAGAATATATTACCCAA+GGG | - | chr3.1:53775507-53775526 | None:intergenic | 30.0% | |
CTGTTGTGGTTTCTAATTAT+AGG | + | chr3.1:53773786-53773805 | MS.gene008352:intron | 30.0% | |
GAATTGGTTAAAGAAAAGTG+TGG | - | chr3.1:53772391-53772410 | None:intergenic | 30.0% | |
GACTAAATGTTGTCAAATAG+TGG | + | chr3.1:53770948-53770967 | MS.gene008352:intron | 30.0% | |
GATTTCTTTCTTTAGTGATC+TGG | + | chr3.1:53770791-53770810 | MS.gene008352:intron | 30.0% | |
GGATTCACAAATTAATAGCT+AGG | + | chr3.1:53772786-53772805 | MS.gene008352:intron | 30.0% | |
TAACCAATAAAGAAAATCCC+AGG | - | chr3.1:53773236-53773255 | None:intergenic | 30.0% | |
TAAGTACGTAACCATAAAGA+GGG | - | chr3.1:53774352-53774371 | None:intergenic | 30.0% | |
TAATGAAGCGAGATAAATGA+AGG | + | chr3.1:53773478-53773497 | MS.gene008352:intron | 30.0% | |
TAATTTAAGTACACTGTCCA+TGG | + | chr3.1:53770722-53770741 | MS.gene008352:intron | 30.0% | |
TATGATTTCACTGAAAACCT+GGG | + | chr3.1:53773172-53773191 | MS.gene008352:CDS | 30.0% | |
TATTGTGATACTAATAGCAC+TGG | - | chr3.1:53772228-53772247 | None:intergenic | 30.0% | |
TCTTTATGGTTACGTACTTA+GGG | + | chr3.1:53774352-53774371 | MS.gene008352:intron | 30.0% | |
TGGTTGTTACTCTTATGATT+TGG | + | chr3.1:53775443-53775462 | MS.gene008352:CDS | 30.0% | |
TGTTGGAGAAAAAGAGTTTA+GGG | - | chr3.1:53770223-53770242 | None:intergenic | 30.0% | |
TGTTGTAAAACTAATAGCAC+TGG | - | chr3.1:53772329-53772348 | None:intergenic | 30.0% | |
TTGATTTATGTGTGGGATTT+AGG | + | chr3.1:53770351-53770370 | MS.gene008352:intron | 30.0% | |
TTGGGTAATATATTCTTTGG+CGG | + | chr3.1:53775507-53775526 | MS.gene008352:CDS | 30.0% | |
TTGTTGGAGAAAAAGAGTTT+AGG | - | chr3.1:53770224-53770243 | None:intergenic | 30.0% | |
! | AAACCTGGGATTTTCTTTAT+TGG | + | chr3.1:53773230-53773249 | MS.gene008352:intron | 30.0% |
! | AACTTTCAAGAGAATTTTGG+AGG | + | chr3.1:53772055-53772074 | MS.gene008352:CDS | 30.0% |
! | AATGTCAAAAAGCATACAAC+TGG | - | chr3.1:53771991-53772010 | None:intergenic | 30.0% |
! | AATTCACAAATGGATTCACT+TGG | + | chr3.1:53772109-53772128 | MS.gene008352:intron | 30.0% |
! | AGATATCTTTGGGAAAAACA+AGG | + | chr3.1:53775609-53775628 | MS.gene008352:CDS | 30.0% |
! | CATAGTGAGGTTTTACAAAA+TGG | - | chr3.1:53774391-53774410 | None:intergenic | 30.0% |
! | GATTTTTGTGTATAATGGTC+AGG | + | chr3.1:53771155-53771174 | MS.gene008352:intron | 30.0% |
! | GGTTTTCAGTGAAATCATAT+CGG | - | chr3.1:53773171-53773190 | None:intergenic | 30.0% |
! | TCGTTTAAGTTAACAAAACG+AGG | + | chr3.1:53773667-53773686 | MS.gene008352:intron | 30.0% |
! | TGTTTTATCTCTCTCGTAAA+TGG | - | chr3.1:53775159-53775178 | None:intergenic | 30.0% |
! | TTCTTTGTTGATTACTTTCC+AGG | + | chr3.1:53771634-53771653 | MS.gene008352:intron | 30.0% |
! | TTTTTGTGTTGGATTAATGC+AGG | + | chr3.1:53775377-53775396 | MS.gene008352:intron | 30.0% |
!! | TGAAATTCGACAAAGTGTTT+TGG | + | chr3.1:53774614-53774633 | MS.gene008352:CDS | 30.0% |
!! | TGATTTGGTTGGAAAATCAA+CGG | + | chr3.1:53775458-53775477 | MS.gene008352:CDS | 30.0% |
!! | TGTATGCTTTTTGACATTGA+TGG | + | chr3.1:53771993-53772012 | MS.gene008352:CDS | 30.0% |
!! | TGTTACTCTTATGATTTGGT+TGG | + | chr3.1:53775447-53775466 | MS.gene008352:CDS | 30.0% |
!! | TTTGCAAGAGCATTTATAAC+TGG | - | chr3.1:53773859-53773878 | None:intergenic | 30.0% |
!!! | GGATTTTTTTGTTAGTCCTT+AGG | + | chr3.1:53773625-53773644 | MS.gene008352:intron | 30.0% |
!!! | TTTTTGAACTTGTTTCTGGT+GGG | + | chr3.1:53770599-53770618 | MS.gene008352:intron | 30.0% |
!!! | TTTTTTGAACTTGTTTCTGG+TGG | + | chr3.1:53770598-53770617 | MS.gene008352:intron | 30.0% |
AAAATAGCCACATGCATAAG+AGG | - | chr3.1:53774674-53774693 | None:intergenic | 35.0% | |
AAACTGAGACGATCTAAACT+CGG | - | chr3.1:53775116-53775135 | None:intergenic | 35.0% | |
AACAGTGTAAGCAATACTTC+AGG | - | chr3.1:53773771-53773790 | None:intergenic | 35.0% | |
AACATGAGAGGTTAACTTAC+TGG | - | chr3.1:53774844-53774863 | None:intergenic | 35.0% | |
AAGTACGTAACCATAAAGAG+GGG | - | chr3.1:53774351-53774370 | None:intergenic | 35.0% | |
AATGTCACGACTTAACTACT+TGG | + | chr3.1:53773921-53773940 | MS.gene008352:intron | 35.0% | |
ACTTTCCTCTTCAAATTTCG+AGG | + | chr3.1:53775685-53775704 | MS.gene008352:CDS | 35.0% | |
AGTTTGTAATGAGAATCCCT+TGG | + | chr3.1:53771665-53771684 | MS.gene008352:CDS | 35.0% | |
ATATATGCAGAATGGAAGCT+TGG | + | chr3.1:53773132-53773151 | MS.gene008352:CDS | 35.0% | |
ATCAAATTGAACTTACCACG+AGG | - | chr3.1:53771496-53771515 | None:intergenic | 35.0% | |
ATTTCTGACTACAGTCTACA+GGG | + | chr3.1:53775062-53775081 | MS.gene008352:intron | 35.0% | |
CATATCCTCGAAATTTGAAG+AGG | - | chr3.1:53775693-53775712 | None:intergenic | 35.0% | |
CCACTTCTCAAAAGAAATAG+AGG | - | chr3.1:53775274-53775293 | None:intergenic | 35.0% | |
CCCTTGGGTAATATATTCTT+TGG | + | chr3.1:53775504-53775523 | MS.gene008352:CDS | 35.0% | |
CTAACCATCGAGAAAATTGT+TGG | - | chr3.1:53770240-53770259 | None:intergenic | 35.0% | |
CTAAGTACGTAACCATAAAG+AGG | - | chr3.1:53774353-53774372 | None:intergenic | 35.0% | |
CTCTTTATGGTTACGTACTT+AGG | + | chr3.1:53774351-53774370 | MS.gene008352:intron | 35.0% | |
CTTAATCTCTACCTTAGTTG+TGG | - | chr3.1:53773005-53773024 | None:intergenic | 35.0% | |
CTTACACTATATCGTACAAG+CGG | + | chr3.1:53771711-53771730 | MS.gene008352:CDS | 35.0% | |
GATAGACGCAGATGAAATAT+TGG | - | chr3.1:53775234-53775253 | None:intergenic | 35.0% | |
GCAATGGTATATATGCAGAA+TGG | + | chr3.1:53773124-53773143 | MS.gene008352:CDS | 35.0% | |
GCAATTGACATCTTAGTGTT+TGG | + | chr3.1:53771035-53771054 | MS.gene008352:intron | 35.0% | |
GCACCAATAACTATAACTGA+CGG | - | chr3.1:53771221-53771240 | None:intergenic | 35.0% | |
GCCAAAGAATATATTACCCA+AGG | - | chr3.1:53775508-53775527 | None:intergenic | 35.0% | |
GCTATCATAACTGTTCCTAT+TGG | + | chr3.1:53774490-53774509 | MS.gene008352:CDS | 35.0% | |
GTAATTACCTTTCCAGATCA+TGG | - | chr3.1:53771758-53771777 | None:intergenic | 35.0% | |
GTAATTCACAAGTGATCTCA+AGG | - | chr3.1:53773534-53773553 | None:intergenic | 35.0% | |
GTTAATGATATACAGGTCAG+TGG | - | chr3.1:53771875-53771894 | None:intergenic | 35.0% | |
GTTTCTGCAATTTCAGATCT+TGG | + | chr3.1:53774565-53774584 | MS.gene008352:CDS | 35.0% | |
TAAAAGGGGAAAGAGGATAT+AGG | - | chr3.1:53770273-53770292 | None:intergenic | 35.0% | |
TAATCCTAAAACATGGACCA+TGG | - | chr3.1:53770742-53770761 | None:intergenic | 35.0% | |
TACAAGTAACTGTATGAAGC+CGG | - | chr3.1:53772539-53772558 | None:intergenic | 35.0% | |
TATATGACCATGATCTGGAA+AGG | + | chr3.1:53771748-53771767 | MS.gene008352:CDS | 35.0% | |
TATGTTAACTTCAGGCAACA+AGG | + | chr3.1:53773083-53773102 | MS.gene008352:intron | 35.0% | |
TCAGTATCTTGTGTCACATT+GGG | + | chr3.1:53775401-53775420 | MS.gene008352:CDS | 35.0% | |
TCAGTTATAGTTATTGGTGC+TGG | + | chr3.1:53771221-53771240 | MS.gene008352:CDS | 35.0% | |
TCTGCTAGACATGAAACATT+AGG | + | chr3.1:53775657-53775676 | MS.gene008352:CDS | 35.0% | |
TGGAGTTAGTTGAATGAGTA+AGG | + | chr3.1:53771585-53771604 | MS.gene008352:intron | 35.0% | |
TGGGTAATATATTCTTTGGC+GGG | + | chr3.1:53775508-53775527 | MS.gene008352:CDS | 35.0% | |
TGTCTTATATGACCATGATC+TGG | + | chr3.1:53771743-53771762 | MS.gene008352:CDS | 35.0% | |
TTATAGGAACATGTACTCTC+TGG | + | chr3.1:53773802-53773821 | MS.gene008352:intron | 35.0% | |
TTCAGTATCTTGTGTCACAT+TGG | + | chr3.1:53775400-53775419 | MS.gene008352:CDS | 35.0% | |
TTGTAAAACCTCACTATGCA+GGG | + | chr3.1:53774393-53774412 | MS.gene008352:intron | 35.0% | |
TTTGTAAAACCTCACTATGC+AGG | + | chr3.1:53774392-53774411 | MS.gene008352:intron | 35.0% | |
! | AAGTATTGCTTACACTGTTG+TGG | + | chr3.1:53773772-53773791 | MS.gene008352:intron | 35.0% |
! | ATCTCTTACTACATGGACTA+TGG | - | chr3.1:53774875-53774894 | None:intergenic | 35.0% |
! | ATTCATACTGACTACTCGTT+TGG | + | chr3.1:53771450-53771469 | MS.gene008352:CDS | 35.0% |
! | CAATAAGGTAATGGTTACCT+TGG | + | chr3.1:53774438-53774457 | MS.gene008352:CDS | 35.0% |
! | CAATCCGGTTCTTGTTTATA+TGG | + | chr3.1:53774717-53774736 | MS.gene008352:CDS | 35.0% |
! | TGATCTTTGAAAAGATGGCT+CGG | - | chr3.1:53775007-53775026 | None:intergenic | 35.0% |
! | TTAGTGATCTGGAATCTGAA+TGG | + | chr3.1:53770802-53770821 | MS.gene008352:intron | 35.0% |
! | TTCTCCAACAATTTTCTCGA+TGG | + | chr3.1:53770233-53770252 | MS.gene008352:CDS | 35.0% |
! | TTGTTTCTCATCGTGTGTTT+GGG | + | chr3.1:53771118-53771137 | MS.gene008352:intron | 35.0% |
! | TTTGTTTCTCATCGTGTGTT+TGG | + | chr3.1:53771117-53771136 | MS.gene008352:intron | 35.0% |
!! | AGCACTGGTTCATACATAAA+TGG | - | chr3.1:53772213-53772232 | None:intergenic | 35.0% |
!! | CCTCTATTTCTTTTGAGAAG+TGG | + | chr3.1:53775271-53775290 | MS.gene008352:intron | 35.0% |
!! | TTTCAAGAGAATTTTGGAGG+AGG | + | chr3.1:53772058-53772077 | MS.gene008352:CDS | 35.0% |
!!! | CTTTTAAGATACGGGAAGAA+AGG | - | chr3.1:53775309-53775328 | None:intergenic | 35.0% |
AAAAGTCAAGTTCCCGAAGT+TGG | - | chr3.1:53775355-53775374 | None:intergenic | 40.0% | |
AACACCCATAAGTTCTACGT+CGG | - | chr3.1:53774641-53774660 | None:intergenic | 40.0% | |
AACCATAAAGAGGGGGATAA+AGG | - | chr3.1:53774343-53774362 | None:intergenic | 40.0% | |
AACGATATGCTACAGTGCTA+TGG | - | chr3.1:53770985-53771004 | None:intergenic | 40.0% | |
AACTGAGACGATCTAAACTC+GGG | - | chr3.1:53775115-53775134 | None:intergenic | 40.0% | |
ACAAGTAACTGTATGAAGCC+GGG | - | chr3.1:53772538-53772557 | None:intergenic | 40.0% | |
ACACCTTAAAAGATGCATCG+TGG | - | chr3.1:53771277-53771296 | None:intergenic | 40.0% | |
AGTACGTAACCATAAAGAGG+GGG | - | chr3.1:53774350-53774369 | None:intergenic | 40.0% | |
AGTTAACCTCTCATGTTCTC+CGG | + | chr3.1:53774847-53774866 | MS.gene008352:intron | 40.0% | |
ATAACTATAACTGACGGAGC+TGG | - | chr3.1:53771215-53771234 | None:intergenic | 40.0% | |
ATACCATTGCAGCACTTCAT+GGG | - | chr3.1:53773114-53773133 | None:intergenic | 40.0% | |
ATTACAAACTCCATGTAGCC+TGG | - | chr3.1:53771655-53771674 | None:intergenic | 40.0% | |
ATTGCAGAAACCTTCCAATC+AGG | - | chr3.1:53774556-53774575 | None:intergenic | 40.0% | |
ATTGCAGTTGTGGTATTTGC+TGG | + | chr3.1:53770769-53770788 | MS.gene008352:intron | 40.0% | |
ATTGTAGCCACTGGATATCT+TGG | - | chr3.1:53774422-53774441 | None:intergenic | 40.0% | |
CAGTATCTTGTGTCACATTG+GGG | + | chr3.1:53775402-53775421 | MS.gene008352:CDS | 40.0% | |
CAGTGGCTACAATAAGGTAA+TGG | + | chr3.1:53774429-53774448 | MS.gene008352:CDS | 40.0% | |
CATTACCTTATTGTAGCCAC+TGG | - | chr3.1:53774431-53774450 | None:intergenic | 40.0% | |
CCTCATCAGATAACTTCTCA+AGG | - | chr3.1:53774765-53774784 | None:intergenic | 40.0% | |
CCTTGAGAAGTTATCTGATG+AGG | + | chr3.1:53774762-53774781 | MS.gene008352:CDS | 40.0% | |
CGATTTCAATTGTGCTGGAT+AGG | + | chr3.1:53772976-53772995 | MS.gene008352:CDS | 40.0% | |
CGTGTGTATACATCCAACTT+CGG | + | chr3.1:53775339-53775358 | MS.gene008352:intron | 40.0% | |
CTAATGCTGTGTTTGAGTGA+TGG | + | chr3.1:53770410-53770429 | MS.gene008352:intron | 40.0% | |
CTCAATCTCCATAAAGCAAC+AGG | + | chr3.1:53774694-53774713 | MS.gene008352:CDS | 40.0% | |
GAGTAACAACCAAGAGAGTT+TGG | - | chr3.1:53775435-53775454 | None:intergenic | 40.0% | |
GATATCCAGTGGCTACAATA+AGG | + | chr3.1:53774423-53774442 | MS.gene008352:CDS | 40.0% | |
GATTTCTGACTACAGTCTAC+AGG | + | chr3.1:53775061-53775080 | MS.gene008352:intron | 40.0% | |
GCAAGGAATCTCTTACTACA+TGG | - | chr3.1:53774882-53774901 | None:intergenic | 40.0% | |
GCTCCGTCAGTTATAGTTAT+TGG | + | chr3.1:53771215-53771234 | MS.gene008352:CDS | 40.0% | |
GCTGCCATATAAACAAGAAC+CGG | - | chr3.1:53774724-53774743 | None:intergenic | 40.0% | |
GGGTAATATATTCTTTGGCG+GGG | + | chr3.1:53775509-53775528 | MS.gene008352:CDS | 40.0% | |
GGTATGAGCAAGTGATTGAA+TGG | - | chr3.1:53772517-53772536 | None:intergenic | 40.0% | |
GTCATTGGGTTATTAGGAGA+AGG | + | chr3.1:53773604-53773623 | MS.gene008352:intron | 40.0% | |
GTGTGTATACATCCAACTTC+GGG | + | chr3.1:53775340-53775359 | MS.gene008352:intron | 40.0% | |
TATACCATTGCAGCACTTCA+TGG | - | chr3.1:53773115-53773134 | None:intergenic | 40.0% | |
TCACACGTCATTGGGTTATT+AGG | + | chr3.1:53773598-53773617 | MS.gene008352:intron | 40.0% | |
TCAGAAACTGAAATGTCCTC+AGG | - | chr3.1:53772954-53772973 | None:intergenic | 40.0% | |
TGAAATCATATCGGCATCAG+CGG | - | chr3.1:53773162-53773181 | None:intergenic | 40.0% | |
TGAAGCGATTTCAATTGTGC+TGG | + | chr3.1:53772971-53772990 | MS.gene008352:CDS | 40.0% | |
TGATTACTTTCCAGGCTACA+TGG | + | chr3.1:53771642-53771661 | MS.gene008352:intron | 40.0% | |
TTCAATCACTTGCTCATACC+CGG | + | chr3.1:53772517-53772536 | MS.gene008352:intron | 40.0% | |
TTCCTTTATCCCCCTCTTTA+TGG | + | chr3.1:53774338-53774357 | MS.gene008352:intron | 40.0% | |
TTGAACCAAGACTTCCTGAT+TGG | + | chr3.1:53774539-53774558 | MS.gene008352:CDS | 40.0% | |
TTGATATACGCTTGAACCAC+AGG | + | chr3.1:53773884-53773903 | MS.gene008352:CDS | 40.0% | |
TTTGGTTGTCCAGTTGACAT+GGG | + | chr3.1:53771468-53771487 | MS.gene008352:CDS | 40.0% | |
! | AAGATGTCAATTGCGGATTG+TGG | - | chr3.1:53771029-53771048 | None:intergenic | 40.0% |
! | ACCGCTGATCTTTGAAAAGA+TGG | - | chr3.1:53775012-53775031 | None:intergenic | 40.0% |
! | AGATGTCAATTGCGGATTGT+GGG | - | chr3.1:53771028-53771047 | None:intergenic | 40.0% |
! | GCAATTTCAGATCTTGGTGT+AGG | + | chr3.1:53774571-53774590 | MS.gene008352:CDS | 40.0% |
! | GCCATCTTTTCAAAGATCAG+CGG | + | chr3.1:53775008-53775027 | MS.gene008352:intron | 40.0% |
! | GTTCTTGTTTATATGGCAGC+TGG | + | chr3.1:53774724-53774743 | MS.gene008352:CDS | 40.0% |
! | TAAGGTAATGGTTACCTTGG+AGG | + | chr3.1:53774441-53774460 | MS.gene008352:CDS | 40.0% |
! | TACTACATGGACTATGGATC+CGG | - | chr3.1:53774869-53774888 | None:intergenic | 40.0% |
! | TCTCCACGATGCATCTTTTA+AGG | + | chr3.1:53771271-53771290 | MS.gene008352:CDS | 40.0% |
!! | TTATTGGTGCTGGAATCTCA+GGG | + | chr3.1:53771231-53771250 | MS.gene008352:CDS | 40.0% |
!! | TTATTTTGCACGCATACCTG+TGG | - | chr3.1:53773903-53773922 | None:intergenic | 40.0% |
!!! | TCTGGTGGGATGTTTTAGTT+TGG | + | chr3.1:53770613-53770632 | MS.gene008352:intron | 40.0% |
AAAGTTTCTGCCATCCTCCA+AGG | - | chr3.1:53774458-53774477 | None:intergenic | 45.0% | |
ACACCCATAAGTTCTACGTC+GGG | - | chr3.1:53774640-53774659 | None:intergenic | 45.0% | |
ACCAAGACTTCCTGATTGGA+AGG | + | chr3.1:53774543-53774562 | MS.gene008352:CDS | 45.0% | |
ACCTTCCAATCAGGAAGTCT+TGG | - | chr3.1:53774547-53774566 | None:intergenic | 45.0% | |
ACTTCAATGACCGTCTGTTG+TGG | - | chr3.1:53772029-53772048 | None:intergenic | 45.0% | |
AGCTATGAGCTTAGACAACC+AGG | + | chr3.1:53775533-53775552 | MS.gene008352:CDS | 45.0% | |
AGCTTATTCTGCTGGGGTTA+TGG | + | chr3.1:53775569-53775588 | MS.gene008352:CDS | 45.0% | |
ATGTACTCTCTGGTGGTCAT+GGG | + | chr3.1:53773812-53773831 | MS.gene008352:CDS | 45.0% | |
ATTTGGTCAGGTCACCCTAT+TGG | + | chr3.1:53771401-53771420 | MS.gene008352:intron | 45.0% | |
CAACAGACGGTCATTGAAGT+TGG | + | chr3.1:53772029-53772048 | MS.gene008352:CDS | 45.0% | |
CAACGTATCAATGGAGCCAA+GGG | - | chr3.1:53771684-53771703 | None:intergenic | 45.0% | |
CCATAAAGCAACAGGCAATC+CGG | + | chr3.1:53774702-53774721 | MS.gene008352:CDS | 45.0% | |
CCATCAAGTTCCACAACAGA+CGG | + | chr3.1:53772016-53772035 | MS.gene008352:CDS | 45.0% | |
CCTATCTCGTGACTCCAATA+GGG | - | chr3.1:53771418-53771437 | None:intergenic | 45.0% | |
CCTGTCTGCAGTTATCAGAA+GGG | - | chr3.1:53772912-53772931 | None:intergenic | 45.0% | |
CCTTCTGATAACTGCAGACA+GGG | + | chr3.1:53772910-53772929 | MS.gene008352:intron | 45.0% | |
CTATGAGCTTAGACAACCAG+GGG | + | chr3.1:53775535-53775554 | MS.gene008352:CDS | 45.0% | |
CTGCAGATTGTGTGAATGCA+AGG | - | chr3.1:53774899-53774918 | None:intergenic | 45.0% | |
GATATGCTACAGTGCTATGG+CGG | - | chr3.1:53770982-53771001 | None:intergenic | 45.0% | |
GCGTCTATCTCTCTTGCAAA+TGG | + | chr3.1:53775245-53775264 | MS.gene008352:intron | 45.0% | |
GCTATGAGCTTAGACAACCA+GGG | + | chr3.1:53775534-53775553 | MS.gene008352:CDS | 45.0% | |
GGAACAGATCCAAACTCTCT+TGG | + | chr3.1:53775423-53775442 | MS.gene008352:CDS | 45.0% | |
GTAATGGTTACCTTGGAGGA+TGG | + | chr3.1:53774445-53774464 | MS.gene008352:CDS | 45.0% | |
GTCTAGCAGAAACTTGAGAC+AGG | - | chr3.1:53775647-53775666 | None:intergenic | 45.0% | |
GTTTGGTTGTCCAGTTGACA+TGG | + | chr3.1:53771467-53771486 | MS.gene008352:CDS | 45.0% | |
TACGATATAGTGTAAGCCCC+AGG | - | chr3.1:53771707-53771726 | None:intergenic | 45.0% | |
TAGCCACATGCATAAGAGGT+AGG | - | chr3.1:53774670-53774689 | None:intergenic | 45.0% | |
TAGGAACATGTACTCTCTGG+TGG | + | chr3.1:53773805-53773824 | MS.gene008352:intron | 45.0% | |
TGCATGGAGCTTATTCTGCT+GGG | + | chr3.1:53775562-53775581 | MS.gene008352:CDS | 45.0% | |
TGCTCTCTTGGCTTCAAACA+TGG | - | chr3.1:53774036-53774055 | None:intergenic | 45.0% | |
TGGATAGGCATCCACAACTA+AGG | + | chr3.1:53772991-53773010 | MS.gene008352:CDS | 45.0% | |
TTCACTGAAAACCTGGGATC+AGG | + | chr3.1:53773178-53773197 | MS.gene008352:CDS | 45.0% | |
TTGTTTATATGGCAGCTGGC+AGG | + | chr3.1:53774728-53774747 | MS.gene008352:CDS | 45.0% | |
TTTATGTAGCTGACCCCATC+TGG | + | chr3.1:53770641-53770660 | MS.gene008352:intron | 45.0% | |
! | CTGTCCATGGTCCATGTTTT+AGG | + | chr3.1:53770735-53770754 | MS.gene008352:intron | 45.0% |
! | GATGTCAATTGCGGATTGTG+GGG | - | chr3.1:53771027-53771046 | None:intergenic | 45.0% |
! | TGCTGACTGTGTGAATGTAG+TGG | + | chr3.1:53775039-53775058 | MS.gene008352:intron | 45.0% |
!! | AGAAGTGCTCATTGCTCTCT+TGG | - | chr3.1:53774048-53774067 | None:intergenic | 45.0% |
!! | GTTATTGGTGCTGGAATCTC+AGG | + | chr3.1:53771230-53771249 | MS.gene008352:CDS | 45.0% |
!! | TTTCCCATGAAGTGCTGCAA+TGG | + | chr3.1:53773108-53773127 | MS.gene008352:CDS | 45.0% |
!! | ATAAAACAAATAATATTAAA+AGG | - | chr3.1:53770289-53770308 | None:intergenic | 5.0% |
!! | TAAAACAAATAATATTAAAA+GGG | - | chr3.1:53770288-53770307 | None:intergenic | 5.0% |
!!! | AATATATATTTTTTTTTTGA+GGG | - | chr3.1:53774009-53774028 | None:intergenic | 5.0% |
!!! | ATTTGTTTTATTAAAAAAAT+TGG | + | chr3.1:53770298-53770317 | MS.gene008352:intron | 5.0% |
!!! | TTTGTTTTATTAAAAAAATT+GGG | + | chr3.1:53770299-53770318 | MS.gene008352:intron | 5.0% |
AACTGCAGACAGGGAAAGTG+AGG | + | chr3.1:53772919-53772938 | MS.gene008352:intron | 50.0% | |
ACTGCAGACAGGGAAAGTGA+GGG | + | chr3.1:53772920-53772939 | MS.gene008352:intron | 50.0% | |
AGGGTGACCAAGATATCCAG+TGG | + | chr3.1:53774412-53774431 | MS.gene008352:intron | 50.0% | |
ATGGATCCGGAGAACATGAG+AGG | - | chr3.1:53774856-53774875 | None:intergenic | 50.0% | |
CAGACTCACAGTGCAGCAAA+TGG | + | chr3.1:53772822-53772841 | MS.gene008352:intron | 50.0% | |
CATGTACTCTCTGGTGGTCA+TGG | + | chr3.1:53773811-53773830 | MS.gene008352:CDS | 50.0% | |
CCCTATTGGAGTCACGAGAT+AGG | + | chr3.1:53771415-53771434 | MS.gene008352:CDS | 50.0% | |
CCCTGTCTGCAGTTATCAGA+AGG | - | chr3.1:53772913-53772932 | None:intergenic | 50.0% | |
CCCTTCTGATAACTGCAGAC+AGG | + | chr3.1:53772909-53772928 | MS.gene008352:intron | 50.0% | |
CCGTCTGTTGTGGAACTTGA+TGG | - | chr3.1:53772019-53772038 | None:intergenic | 50.0% | |
CGATCTAAACTCGGGCAATG+AGG | - | chr3.1:53775107-53775126 | None:intergenic | 50.0% | |
CTAAACTCGGGCAATGAGGA+TGG | - | chr3.1:53775103-53775122 | None:intergenic | 50.0% | |
CTCCATTGATACGTTGCCTG+GGG | + | chr3.1:53771688-53771707 | MS.gene008352:CDS | 50.0% | |
CTTGTCTTGTCCCACCAGAT+GGG | - | chr3.1:53770658-53770677 | None:intergenic | 50.0% | |
GCAACGTATCAATGGAGCCA+AGG | - | chr3.1:53771685-53771704 | None:intergenic | 50.0% | |
GCATGGAGCTTATTCTGCTG+GGG | + | chr3.1:53775563-53775582 | MS.gene008352:CDS | 50.0% | |
GCCTATCTCGTGACTCCAAT+AGG | - | chr3.1:53771419-53771438 | None:intergenic | 50.0% | |
GCTCCATTGATACGTTGCCT+GGG | + | chr3.1:53771687-53771706 | MS.gene008352:CDS | 50.0% | |
GCTCCTACCTCTTATGCATG+TGG | + | chr3.1:53774664-53774683 | MS.gene008352:CDS | 50.0% | |
GTGCATGGAGCTTATTCTGC+TGG | + | chr3.1:53775561-53775580 | MS.gene008352:CDS | 50.0% | |
TGGCCCGACGTAGAACTTAT+GGG | + | chr3.1:53774634-53774653 | MS.gene008352:CDS | 50.0% | |
TTGGAGTCACGAGATAGGCT+TGG | + | chr3.1:53771420-53771439 | MS.gene008352:CDS | 50.0% | |
TTGGCCCGACGTAGAACTTA+TGG | + | chr3.1:53774633-53774652 | MS.gene008352:CDS | 50.0% | |
TTGTCTTGTCCCACCAGATG+GGG | - | chr3.1:53770657-53770676 | None:intergenic | 50.0% | |
! | TTCAAAGATCAGCGGTGCTG+AGG | + | chr3.1:53775016-53775035 | MS.gene008352:intron | 50.0% |
! | TTGCGGATTGTGGGGAAAAG+CGG | - | chr3.1:53771019-53771038 | None:intergenic | 50.0% |
!! | CCGGATTGCCTGTTGCTTTA+TGG | - | chr3.1:53774705-53774724 | None:intergenic | 50.0% |
!! | CTTACTGGCTCACAAGCATC+AGG | - | chr3.1:53774829-53774848 | None:intergenic | 50.0% |
AATGGGACTTGCCTGATCCC+AGG | - | chr3.1:53773192-53773211 | None:intergenic | 55.0% | |
AGCCCCAGGCAACGTATCAA+TGG | - | chr3.1:53771693-53771712 | None:intergenic | 55.0% | |
AGTGAGGGATGAGCATCCTG+AGG | + | chr3.1:53772935-53772954 | MS.gene008352:CDS | 55.0% | |
ATGTAGCTGACCCCATCTGG+TGG | + | chr3.1:53770644-53770663 | MS.gene008352:intron | 55.0% | |
CCATCTGGTGGGACAAGACA+AGG | + | chr3.1:53770656-53770675 | MS.gene008352:intron | 55.0% | |
CCTTGTCTTGTCCCACCAGA+TGG | - | chr3.1:53770659-53770678 | None:intergenic | 55.0% | |
CTCGGGCAATGAGGATGGTA+TGG | - | chr3.1:53775098-53775117 | None:intergenic | 55.0% | |
CTTGGTCACCCTGCATAGTG+AGG | - | chr3.1:53774404-53774423 | None:intergenic | 55.0% | |
GACAAGCTTCGTGCACCCTT+GGG | + | chr3.1:53775489-53775508 | MS.gene008352:CDS | 55.0% | |
GAGTCACGAGATAGGCTTGG+TGG | + | chr3.1:53771423-53771442 | MS.gene008352:CDS | 55.0% | |
GGCTCCATTGATACGTTGCC+TGG | + | chr3.1:53771686-53771705 | MS.gene008352:CDS | 55.0% | |
TGACAAGCTTCGTGCACCCT+TGG | + | chr3.1:53775488-53775507 | MS.gene008352:CDS | 55.0% | |
TGTAGCTGACCCCATCTGGT+GGG | + | chr3.1:53770645-53770664 | MS.gene008352:intron | 55.0% | |
!! | CTGACGGAGCTGGTCTTTGT+TGG | - | chr3.1:53771205-53771224 | None:intergenic | 55.0% |
AAGCTCCATGCACAGACCCC+TGG | - | chr3.1:53775554-53775573 | None:intergenic | 60.0% | |
CACGAGGCTCCCATGTCAAC+TGG | - | chr3.1:53771480-53771499 | None:intergenic | 60.0% | |
CAGTTGACATGGGAGCCTCG+TGG | + | chr3.1:53771478-53771497 | MS.gene008352:CDS | 60.0% | |
CTCTGGTGGTCATGGGCTCA+TGG | + | chr3.1:53773819-53773838 | MS.gene008352:CDS | 60.0% | |
GACAACCAGGGGTCTGTGCA+TGG | + | chr3.1:53775546-53775565 | MS.gene008352:CDS | 60.0% | |
GGTCATGGGCTCATGGTGCA+AGG | + | chr3.1:53773826-53773845 | MS.gene008352:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 53770215 | 53775713 | 53770215 | ID=MS.gene008352 |
chr3.1 | mRNA | 53770215 | 53775713 | 53770215 | ID=MS.gene008352.t1;Parent=MS.gene008352 |
chr3.1 | exon | 53770215 | 53770254 | 53770215 | ID=MS.gene008352.t1.exon1;Parent=MS.gene008352.t1 |
chr3.1 | CDS | 53770215 | 53770254 | 53770215 | ID=cds.MS.gene008352.t1;Parent=MS.gene008352.t1 |
chr3.1 | exon | 53771177 | 53771292 | 53771177 | ID=MS.gene008352.t1.exon2;Parent=MS.gene008352.t1 |
chr3.1 | CDS | 53771177 | 53771292 | 53771177 | ID=cds.MS.gene008352.t1;Parent=MS.gene008352.t1 |
chr3.1 | exon | 53771411 | 53771499 | 53771411 | ID=MS.gene008352.t1.exon3;Parent=MS.gene008352.t1 |
chr3.1 | CDS | 53771411 | 53771499 | 53771411 | ID=cds.MS.gene008352.t1;Parent=MS.gene008352.t1 |
chr3.1 | exon | 53771656 | 53771769 | 53771656 | ID=MS.gene008352.t1.exon4;Parent=MS.gene008352.t1 |
chr3.1 | CDS | 53771656 | 53771769 | 53771656 | ID=cds.MS.gene008352.t1;Parent=MS.gene008352.t1 |
chr3.1 | exon | 53771992 | 53772079 | 53771992 | ID=MS.gene008352.t1.exon5;Parent=MS.gene008352.t1 |
chr3.1 | CDS | 53771992 | 53772079 | 53771992 | ID=cds.MS.gene008352.t1;Parent=MS.gene008352.t1 |
chr3.1 | exon | 53772927 | 53773012 | 53772927 | ID=MS.gene008352.t1.exon6;Parent=MS.gene008352.t1 |
chr3.1 | CDS | 53772927 | 53773012 | 53772927 | ID=cds.MS.gene008352.t1;Parent=MS.gene008352.t1 |
chr3.1 | exon | 53773097 | 53773199 | 53773097 | ID=MS.gene008352.t1.exon7;Parent=MS.gene008352.t1 |
chr3.1 | CDS | 53773097 | 53773199 | 53773097 | ID=cds.MS.gene008352.t1;Parent=MS.gene008352.t1 |
chr3.1 | exon | 53773808 | 53773905 | 53773808 | ID=MS.gene008352.t1.exon8;Parent=MS.gene008352.t1 |
chr3.1 | CDS | 53773808 | 53773905 | 53773808 | ID=cds.MS.gene008352.t1;Parent=MS.gene008352.t1 |
chr3.1 | exon | 53774414 | 53774843 | 53774414 | ID=MS.gene008352.t1.exon9;Parent=MS.gene008352.t1 |
chr3.1 | CDS | 53774414 | 53774843 | 53774414 | ID=cds.MS.gene008352.t1;Parent=MS.gene008352.t1 |
chr3.1 | exon | 53775399 | 53775713 | 53775399 | ID=MS.gene008352.t1.exon10;Parent=MS.gene008352.t1 |
chr3.1 | CDS | 53775399 | 53775713 | 53775399 | ID=cds.MS.gene008352.t1;Parent=MS.gene008352.t1 |
Gene Sequence |
Protein sequence |