Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22232.t1 | XP_013459605.1 | 98.6 | 490 | 7 | 0 | 1 | 490 | 1 | 490 | 2.10E-281 | 977.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22232.t1 | Q9SKX5 | 77.8 | 490 | 109 | 0 | 1 | 490 | 1 | 490 | 1.7e-231 | 803.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22232.t1 | A0A072UW35 | 98.6 | 490 | 7 | 0 | 1 | 490 | 1 | 490 | 1.5e-281 | 977.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22232 | MS.gene049679 | PPI |
| MS.gene22232 | MS.gene05030 | PPI |
| MS.gene22232 | MS.gene46317 | PPI |
| MS.gene019144 | MS.gene22232 | PPI |
| MS.gene061581 | MS.gene22232 | PPI |
| MS.gene22232 | MS.gene019144 | PPI |
| MS.gene22232 | MS.gene92026 | PPI |
| MS.gene22232 | MS.gene017025 | PPI |
| MS.gene22232 | MS.gene47679 | PPI |
| MS.gene22232 | MS.gene008352 | PPI |
| MS.gene22232 | MS.gene038090 | PPI |
| MS.gene22232 | MS.gene46961 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22232.t1 | MTR_3g449620 | 98.571 | 490 | 7 | 0 | 1 | 490 | 1 | 490 | 0.0 | 997 |
| MS.gene22232.t1 | MTR_5g090300 | 82.449 | 490 | 84 | 1 | 1 | 490 | 1 | 488 | 0.0 | 812 |
| MS.gene22232.t1 | MTR_3g064370 | 64.059 | 473 | 168 | 1 | 20 | 490 | 20 | 492 | 0.0 | 638 |
| MS.gene22232.t1 | MTR_3g064370 | 62.651 | 415 | 153 | 1 | 78 | 490 | 1 | 415 | 0.0 | 551 |
| MS.gene22232.t1 | MTR_3g064370 | 67.297 | 370 | 121 | 0 | 20 | 389 | 20 | 389 | 0.0 | 530 |
| MS.gene22232.t1 | MTR_3g113170 | 34.542 | 469 | 252 | 12 | 30 | 454 | 883 | 1340 | 1.59e-64 | 227 |
| MS.gene22232.t1 | MTR_3g113170 | 34.542 | 469 | 252 | 12 | 30 | 454 | 883 | 1340 | 2.25e-64 | 226 |
| MS.gene22232.t1 | MTR_1g023510 | 34.298 | 484 | 260 | 14 | 25 | 454 | 862 | 1341 | 1.98e-63 | 224 |
| MS.gene22232.t1 | MTR_5g087920 | 69.600 | 125 | 38 | 0 | 280 | 404 | 12 | 136 | 2.45e-54 | 179 |
| MS.gene22232.t1 | MTR_6g084700 | 33.404 | 473 | 260 | 15 | 29 | 467 | 221 | 672 | 3.18e-54 | 195 |
| MS.gene22232.t1 | MTR_3g055090 | 32.063 | 446 | 267 | 13 | 29 | 454 | 160 | 589 | 1.16e-53 | 192 |
| MS.gene22232.t1 | MTR_8g464450 | 32.063 | 446 | 267 | 14 | 29 | 454 | 163 | 592 | 8.56e-44 | 165 |
| MS.gene22232.t1 | MTR_1g050535 | 31.838 | 468 | 279 | 13 | 15 | 456 | 190 | 643 | 7.13e-43 | 163 |
| MS.gene22232.t1 | MTR_1g050535 | 31.838 | 468 | 279 | 13 | 15 | 456 | 190 | 643 | 8.84e-43 | 162 |
| MS.gene22232.t1 | MTR_3g033000 | 26.777 | 422 | 265 | 15 | 53 | 451 | 33 | 433 | 1.72e-26 | 112 |
| MS.gene22232.t1 | MTR_3g033000 | 26.455 | 378 | 234 | 15 | 53 | 407 | 33 | 389 | 1.70e-18 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22232.t1 | AT2G43020 | 77.755 | 490 | 109 | 0 | 1 | 490 | 1 | 490 | 0.0 | 794 |
| MS.gene22232.t1 | AT3G59050 | 78.004 | 491 | 104 | 2 | 1 | 490 | 1 | 488 | 0.0 | 793 |
| MS.gene22232.t1 | AT1G65840 | 60.484 | 496 | 186 | 4 | 5 | 490 | 2 | 497 | 0.0 | 619 |
| MS.gene22232.t1 | AT4G16310 | 33.673 | 490 | 249 | 15 | 30 | 454 | 620 | 1098 | 7.38e-62 | 219 |
| MS.gene22232.t1 | AT4G16310 | 33.673 | 490 | 249 | 15 | 30 | 454 | 620 | 1098 | 7.38e-62 | 219 |
| MS.gene22232.t1 | AT4G16310 | 33.673 | 490 | 249 | 15 | 30 | 454 | 620 | 1098 | 7.38e-62 | 219 |
| MS.gene22232.t1 | AT4G16310 | 33.673 | 490 | 249 | 15 | 30 | 454 | 620 | 1098 | 7.38e-62 | 219 |
| MS.gene22232.t1 | AT4G16310 | 33.673 | 490 | 249 | 15 | 30 | 454 | 620 | 1098 | 7.38e-62 | 219 |
| MS.gene22232.t1 | AT3G10390 | 33.115 | 459 | 260 | 13 | 24 | 456 | 181 | 618 | 1.21e-51 | 187 |
| MS.gene22232.t1 | AT3G10390 | 33.115 | 459 | 260 | 13 | 24 | 456 | 181 | 618 | 1.99e-51 | 187 |
| MS.gene22232.t1 | AT3G10390 | 33.115 | 459 | 260 | 13 | 24 | 456 | 233 | 670 | 3.49e-51 | 187 |
| MS.gene22232.t1 | AT3G10390 | 33.115 | 459 | 260 | 13 | 24 | 456 | 233 | 670 | 3.51e-51 | 187 |
| MS.gene22232.t1 | AT1G62830 | 33.405 | 464 | 280 | 14 | 28 | 473 | 266 | 718 | 2.34e-49 | 181 |
| MS.gene22232.t1 | AT3G13682 | 34.831 | 445 | 256 | 14 | 29 | 454 | 161 | 590 | 1.43e-47 | 176 |
| MS.gene22232.t1 | AT5G13700 | 26.872 | 454 | 283 | 15 | 53 | 486 | 30 | 454 | 1.12e-33 | 133 |
| MS.gene22232.t1 | AT4G29720 | 23.670 | 545 | 293 | 15 | 26 | 465 | 3 | 529 | 4.44e-32 | 129 |
Find 161 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTTGTTTACATGCCTTC+TGG | 0.170041 | 3.4:-39595785 | MS.gene22232:CDS |
| AAGCATACCTCTGGTTAATT+TGG | 0.233694 | 3.4:+39600934 | None:intergenic |
| GCCAGTAATAACCTTAATTC+TGG | 0.235503 | 3.4:+39597124 | None:intergenic |
| ACTTCAAGATGCTTCCTTTC+AGG | 0.247076 | 3.4:-39598928 | MS.gene22232:intron |
| TGCTTCCGTGATTGGGAGGC+TGG | 0.257155 | 3.4:-39597822 | MS.gene22232:CDS |
| TTGATAGGAATCCAGAATTA+AGG | 0.262962 | 3.4:-39597135 | MS.gene22232:intron |
| GTCGTTGGTGGTGGCATGGC+TGG | 0.264458 | 3.4:-39598969 | MS.gene22232:CDS |
| TCCTGGTGGTCACGGTCTTA+TGG | 0.287361 | 3.4:-39596257 | MS.gene22232:CDS |
| TGGCCTAATGTAGAGTTCTT+AGG | 0.292763 | 3.4:-39595875 | MS.gene22232:CDS |
| TCCTTGTTTACATGCCTTCT+GGG | 0.312872 | 3.4:-39595784 | MS.gene22232:CDS |
| GTGCAGCCTTGTGGAGATTA+AGG | 0.314384 | 3.4:+39595816 | None:intergenic |
| AATACCACTGAAGTACCTTA+TGG | 0.326701 | 3.4:+39597006 | None:intergenic |
| TCCTTCCAGTCTGGGAGCCT+TGG | 0.329966 | 3.4:+39595965 | None:intergenic |
| ATGGCAGCTTCCTTCCAGTC+TGG | 0.360763 | 3.4:+39595956 | None:intergenic |
| AATCCACTTGCTTCCGTGAT+TGG | 0.366361 | 3.4:-39597830 | MS.gene22232:CDS |
| TGTGCTATACGACCATGATT+TGG | 0.368647 | 3.4:-39597765 | MS.gene22232:CDS |
| ATTCACACTGATTACTCGTT+TGG | 0.376822 | 3.4:-39598013 | MS.gene22232:CDS |
| AAAGTTGTTCGGAGATATAA+TGG | 0.377389 | 3.4:-39596088 | MS.gene22232:CDS |
| TGACAGGAAGTACTTCTTCC+TGG | 0.379276 | 3.4:-39596274 | MS.gene22232:intron |
| TTGGCTAGGGTATTTATAAC+AGG | 0.381256 | 3.4:+39596220 | None:intergenic |
| GTTTGGCTTTCCTGTTGACC+TGG | 0.381528 | 3.4:-39597996 | MS.gene22232:CDS |
| CAGCTATGCACTTTATGATA+AGG | 0.384844 | 3.4:-39597556 | MS.gene22232:CDS |
| CACCCTTGACTGCAGGTTGG+AGG | 0.385422 | 3.4:-39597036 | MS.gene22232:intron |
| ACGAGTAATCAGTGTGAATT+CGG | 0.387049 | 3.4:+39598017 | None:intergenic |
| CCCTTGACTGCAGGTTGGAG+GGG | 0.387852 | 3.4:-39597034 | MS.gene22232:intron |
| ACCCTTGACTGCAGGTTGGA+GGG | 0.394812 | 3.4:-39597035 | MS.gene22232:intron |
| ATCCACTTGCTTCCGTGATT+GGG | 0.395016 | 3.4:-39597829 | MS.gene22232:CDS |
| GTGGTCACGGTCTTATGGTC+AGG | 0.401367 | 3.4:-39596252 | MS.gene22232:CDS |
| GTAGTTGCAGATACATCTTA+TGG | 0.402239 | 3.4:-39595851 | MS.gene22232:CDS |
| TTGCTTCCCCTGCGAAGAAC+AGG | 0.412914 | 3.4:+39595189 | None:intergenic |
| CATGATGCTCCCAGGTCAAC+AGG | 0.413656 | 3.4:+39597986 | None:intergenic |
| CCTTGTGTCTCGGTGGGGCT+CGG | 0.415357 | 3.4:-39595297 | MS.gene22232:CDS |
| GTTGGAGGGGCTTGCCCATA+AGG | 0.416665 | 3.4:-39597021 | MS.gene22232:CDS |
| ATCCCCACTAGTACGGTAAA+GGG | 0.417780 | 3.4:+39597793 | None:intergenic |
| ATGCGTGTGCTGGAGCGATA+TGG | 0.419719 | 3.4:-39595095 | MS.gene22232:CDS |
| GAAGCTGCCATCGCTGAACT+TGG | 0.421827 | 3.4:-39595944 | MS.gene22232:CDS |
| TACAATTTCACTGAATGGTT+GGG | 0.424536 | 3.4:-39596946 | MS.gene22232:CDS |
| GAATCAAGTTCCCCAGGAAT+TGG | 0.428359 | 3.4:-39597529 | MS.gene22232:CDS |
| AATTGAAAGACCACGCTGTA+TGG | 0.437376 | 3.4:+39597162 | None:intergenic |
| GGATTTGTTTCAGCCGGTGA+TGG | 0.439407 | 3.4:-39595066 | MS.gene22232:CDS |
| GCTTCCGTGATTGGGAGGCT+GGG | 0.440070 | 3.4:-39597821 | MS.gene22232:CDS |
| AGGTTGTTCTCTTAGAGTCT+AGG | 0.441740 | 3.4:-39598054 | MS.gene22232:CDS |
| ATACCACTGAAGTACCTTAT+GGG | 0.446467 | 3.4:+39597007 | None:intergenic |
| GCTATTGTTGCTGTCCCTCT+TGG | 0.453416 | 3.4:-39596019 | MS.gene22232:CDS |
| TCAGGGTCACAAAAGTTGTT+CGG | 0.454720 | 3.4:-39596099 | MS.gene22232:intron |
| TGGCAGCTTCCTTCCAGTCT+GGG | 0.455520 | 3.4:+39595957 | None:intergenic |
| TAATCCAGCAATATGGAGTC+AGG | 0.459731 | 3.4:-39600971 | None:intergenic |
| ACTCCTAAGAACTCTACATT+AGG | 0.462175 | 3.4:+39595872 | None:intergenic |
| TGATGGCGGCTGAAGATTGC+AGG | 0.464362 | 3.4:-39595118 | MS.gene22232:CDS |
| TCTGATACAATTTCACTGAA+TGG | 0.465141 | 3.4:-39596951 | MS.gene22232:CDS |
| ATACAATTTCACTGAATGGT+TGG | 0.469296 | 3.4:-39596947 | MS.gene22232:CDS |
| TTGAACCAAGGCTCCCAGAC+TGG | 0.469830 | 3.4:-39595970 | MS.gene22232:CDS |
| TCAGTACCTTGTGTCTCGGT+GGG | 0.472113 | 3.4:-39595303 | MS.gene22232:CDS |
| CTGTTTGTAGCTCTTTGCTA+TGG | 0.477290 | 3.4:-39599032 | MS.gene22232:intron |
| GCAACAAGTATGAGCTATCC+AGG | 0.482634 | 3.4:-39595170 | MS.gene22232:CDS |
| TCACCATCTGTTATTGTCGT+TGG | 0.486179 | 3.4:-39598984 | MS.gene22232:CDS |
| TCGTTGGTGGTGGCATGGCT+GGG | 0.487261 | 3.4:-39598968 | MS.gene22232:CDS |
| GTTACCGGTGAGGACGCATT+AGG | 0.490454 | 3.4:+39595683 | None:intergenic |
| GTCCATGGTGCATTCTCCAC+TGG | 0.492585 | 3.4:-39595143 | MS.gene22232:CDS |
| CAGGAATTGGTAACAAAAGT+TGG | 0.495412 | 3.4:-39597516 | MS.gene22232:CDS |
| GAAGGCATGTAAACAAGGAC+AGG | 0.496470 | 3.4:+39595788 | None:intergenic |
| ACTATATCTACCTGTGTCCT+AGG | 0.496732 | 3.4:+39596182 | None:intergenic |
| ATACATACCTTTCCAAATCA+TGG | 0.498622 | 3.4:+39597753 | None:intergenic |
| AATGCACCATGGACAGATCC+TGG | 0.499465 | 3.4:+39595152 | None:intergenic |
| GTAGATAACCTGTTCTTCGC+AGG | 0.500303 | 3.4:-39595197 | MS.gene22232:CDS |
| GGTTGTTCTCTTAGAGTCTA+GGG | 0.501117 | 3.4:-39598053 | MS.gene22232:CDS |
| AAGCTGCCATCGCTGAACTT+GGG | 0.502576 | 3.4:-39595943 | MS.gene22232:CDS |
| CCATCTGTTATTGTCGTTGG+TGG | 0.503107 | 3.4:-39598981 | MS.gene22232:CDS |
| TTGATATTCGCCTAGGACAC+AGG | 0.503732 | 3.4:-39596192 | MS.gene22232:intron |
| TTCACTGAATGGTTGGGACC+AGG | 0.505370 | 3.4:-39596940 | MS.gene22232:intron |
| GCGAAGAACAGGTTATCTAC+TGG | 0.506541 | 3.4:+39595200 | None:intergenic |
| TTTGGCTTTCCTGTTGACCT+GGG | 0.506960 | 3.4:-39597995 | MS.gene22232:CDS |
| TCAGTGGTATTTATGCAGAA+TGG | 0.507222 | 3.4:-39596994 | MS.gene22232:CDS |
| GCCATCGCTGAACTTGGGGT+TGG | 0.509174 | 3.4:-39595938 | MS.gene22232:CDS |
| GGGCTCGGATATAAATTCAC+TGG | 0.510358 | 3.4:-39595282 | MS.gene22232:CDS |
| TGGTCACGGTCTTATGGTCA+GGG | 0.511034 | 3.4:-39596251 | MS.gene22232:CDS |
| CGAAGAACAGGTTATCTACT+GGG | 0.513240 | 3.4:+39595201 | None:intergenic |
| GATTTGTTTCAGCCGGTGAT+GGG | 0.513807 | 3.4:-39595065 | MS.gene22232:CDS |
| TATCCCCACTAGTACGGTAA+AGG | 0.515136 | 3.4:+39597792 | None:intergenic |
| TCTGTTATTGTCGTTGGTGG+TGG | 0.515718 | 3.4:-39598978 | MS.gene22232:CDS |
| AGATTGCAGGATGCGTGTGC+TGG | 0.516520 | 3.4:-39595105 | MS.gene22232:CDS |
| TATGCACTTTATGATAAGGA+TGG | 0.523913 | 3.4:-39597552 | MS.gene22232:CDS |
| TACCCCTTTACCGTACTAGT+GGG | 0.524830 | 3.4:-39597796 | MS.gene22232:CDS |
| GTACTTCTTCCTGGTGGTCA+CGG | 0.527602 | 3.4:-39596265 | MS.gene22232:CDS |
| TGCATTCTCCACTGGAATGA+TGG | 0.529559 | 3.4:-39595135 | MS.gene22232:CDS |
| AGCTGCCATCGCTGAACTTG+GGG | 0.530403 | 3.4:-39595942 | MS.gene22232:CDS |
| CTTCCGTGATTGGGAGGCTG+GGG | 0.536451 | 3.4:-39597820 | MS.gene22232:CDS |
| AAGGTTGCATGGAGTTTGCA+AGG | 0.539925 | 3.4:-39597855 | MS.gene22232:CDS |
| TGGCAATGTTAGCAGTGTGC+AGG | 0.541458 | 3.4:-39599012 | MS.gene22232:CDS |
| CATATAGCTATGATCAAGTA+GGG | 0.542982 | 3.4:-39595256 | MS.gene22232:CDS |
| ACCATAAGACCGTGACCACC+AGG | 0.544435 | 3.4:+39596256 | None:intergenic |
| ATTTATGCAGAATGGAGGGC+TGG | 0.545277 | 3.4:-39596986 | MS.gene22232:CDS |
| TCATATAGCTATGATCAAGT+AGG | 0.546091 | 3.4:-39595257 | MS.gene22232:CDS |
| CACTTGCTTCCGTGATTGGG+AGG | 0.546419 | 3.4:-39597826 | MS.gene22232:CDS |
| AGCTTTACCATGATGCTCCC+AGG | 0.548394 | 3.4:+39597978 | None:intergenic |
| GTAAAAGTGACCGTGGAAAG+TGG | 0.550227 | 3.4:-39596064 | MS.gene22232:CDS |
| TTCAGTACCTTGTGTCTCGG+TGG | 0.550816 | 3.4:-39595304 | MS.gene22232:CDS |
| CCTTCCTAATGCGTCCTCAC+CGG | 0.556416 | 3.4:-39595687 | MS.gene22232:intron |
| GAATATCAAGACCCTTGGCT+AGG | 0.556541 | 3.4:+39596206 | None:intergenic |
| GCCCAGAAGGCATGTAAACA+AGG | 0.556908 | 3.4:+39595783 | None:intergenic |
| CAGGGTGACGTGCAGCCTTG+TGG | 0.561709 | 3.4:+39595807 | None:intergenic |
| CAGAGTTATCCCCACTAGTA+CGG | 0.561719 | 3.4:+39597786 | None:intergenic |
| TATTGTCGTTGGTGGTGGCA+TGG | 0.564208 | 3.4:-39598973 | MS.gene22232:CDS |
| GGATGGGAATCAAGTTCCCC+AGG | 0.564440 | 3.4:-39597535 | MS.gene22232:CDS |
| TCAGCCGGTGATGGGAGAGA+TGG | 0.564649 | 3.4:-39595057 | MS.gene22232:CDS |
| AGAGCTGGATTTGTTTCAGC+CGG | 0.565941 | 3.4:-39595072 | MS.gene22232:CDS |
| GAGTCTAGGGAAAGACTTGG+TGG | 0.566001 | 3.4:-39598040 | MS.gene22232:CDS |
| TCTTTGGCAAGCCGCCCAGA+AGG | 0.571780 | 3.4:+39595770 | None:intergenic |
| AATATCAAGACCCTTGGCTA+GGG | 0.576929 | 3.4:+39596207 | None:intergenic |
| ACCAAGGCTCCCAGACTGGA+AGG | 0.580515 | 3.4:-39595966 | MS.gene22232:CDS |
| TAACCCCAGCCTCCCAATCA+CGG | 0.581134 | 3.4:+39597817 | None:intergenic |
| CTGTTGACCTGGGAGCATCA+TGG | 0.583662 | 3.4:-39597985 | MS.gene22232:intron |
| ATGCACTTTATGATAAGGAT+GGG | 0.585309 | 3.4:-39597551 | MS.gene22232:CDS |
| GGCTCGGATATAAATTCACT+GGG | 0.586636 | 3.4:-39595281 | MS.gene22232:CDS |
| TAGATAACCTGTTCTTCGCA+GGG | 0.589108 | 3.4:-39595196 | MS.gene22232:CDS |
| GTGGTATTTATGCAGAATGG+AGG | 0.590217 | 3.4:-39596991 | MS.gene22232:CDS |
| TGTTATAAATACCCTAGCCA+AGG | 0.590267 | 3.4:-39596218 | MS.gene22232:CDS |
| TACATACGAGATATCTGAAG+TGG | 0.590541 | 3.4:+39595020 | None:intergenic |
| TAGGCGAATATCAAGACCCT+TGG | 0.592447 | 3.4:+39596201 | None:intergenic |
| ATGTTAGCAGTGTGCAGGAG+AGG | 0.596273 | 3.4:-39599007 | MS.gene22232:CDS |
| TCCAACCCCAAGTTCAGCGA+TGG | 0.600909 | 3.4:+39595937 | None:intergenic |
| AGCCTCTCGTACAGTTCATG+TGG | 0.600917 | 3.4:+39595230 | None:intergenic |
| GAAGCCATCTCTCCCATCAC+CGG | 0.600986 | 3.4:+39595053 | None:intergenic |
| AGCTATCCAGGATCTGTCCA+TGG | 0.605077 | 3.4:-39595158 | MS.gene22232:CDS |
| ATTGAGGTCAAATACCTGAA+AGG | 0.606411 | 3.4:+39598914 | None:intergenic |
| TTCAGCCGCCATCATTCCAG+TGG | 0.607572 | 3.4:+39595127 | None:intergenic |
| AAGGGTCTTGATATTCGCCT+AGG | 0.607787 | 3.4:-39596199 | MS.gene22232:CDS |
| AGATTCAGTACCTTGTGTCT+CGG | 0.611152 | 3.4:-39595307 | MS.gene22232:CDS |
| TTACCCCTTTACCGTACTAG+TGG | 0.612175 | 3.4:-39597797 | MS.gene22232:CDS |
| GCTGGAGCGATATGGAGAGC+TGG | 0.616379 | 3.4:-39595087 | MS.gene22232:CDS |
| TGGTATTTATGCAGAATGGA+GGG | 0.621034 | 3.4:-39596990 | MS.gene22232:CDS |
| TTGCTTTAAGTACACCAAGA+GGG | 0.622687 | 3.4:+39596005 | None:intergenic |
| CCGGTGAGGACGCATTAGGA+AGG | 0.624539 | 3.4:+39595687 | None:intergenic |
| TTGGTGTACTTAAAGCAAAG+AGG | 0.628228 | 3.4:-39596000 | MS.gene22232:CDS |
| AGAGGATATCATTTGAACCA+AGG | 0.632510 | 3.4:-39595982 | MS.gene22232:CDS |
| CCGAGCCCCACCGAGACACA+AGG | 0.638728 | 3.4:+39595297 | None:intergenic |
| TATACGACCATGATTTGGAA+AGG | 0.638994 | 3.4:-39597760 | MS.gene22232:intron |
| CTACTTCCTTAATCTCCACA+AGG | 0.640054 | 3.4:-39595822 | MS.gene22232:CDS |
| CTCCCAATCACGGAAGCAAG+TGG | 0.641232 | 3.4:+39597827 | None:intergenic |
| ACCCCTTTACCGTACTAGTG+GGG | 0.654223 | 3.4:-39597795 | MS.gene22232:CDS |
| CCACCAACGACAATAACAGA+TGG | 0.654633 | 3.4:+39598981 | None:intergenic |
| TAATGGAGTAAAAGTGACCG+TGG | 0.655219 | 3.4:-39596071 | MS.gene22232:CDS |
| TCCCCACTAGTACGGTAAAG+GGG | 0.656059 | 3.4:+39597794 | None:intergenic |
| CAGTACCTTGTGTCTCGGTG+GGG | 0.656791 | 3.4:-39595302 | MS.gene22232:CDS |
| TTAGAGTCTAGGGAAAGACT+TGG | 0.664498 | 3.4:-39598043 | MS.gene22232:CDS |
| AAATAGAGTGGTTACCGGTG+AGG | 0.664572 | 3.4:+39595673 | None:intergenic |
| ACATACGAGATATCTGAAGT+GGG | 0.666300 | 3.4:+39595021 | None:intergenic |
| AACCACATGAACTGTACGAG+AGG | 0.669837 | 3.4:-39595232 | MS.gene22232:CDS |
| GTTATAAATACCCTAGCCAA+GGG | 0.673303 | 3.4:-39596217 | MS.gene22232:CDS |
| AGATAACCTGTTCTTCGCAG+GGG | 0.674456 | 3.4:-39595195 | MS.gene22232:CDS |
| TTTGCTTTAAGTACACCAAG+AGG | 0.681981 | 3.4:+39596004 | None:intergenic |
| TTCCAGTGGAGAATGCACCA+TGG | 0.684552 | 3.4:+39595141 | None:intergenic |
| TTGCCCATAAGGTACTTCAG+TGG | 0.691649 | 3.4:-39597010 | MS.gene22232:CDS |
| GGTCACGGTCTTATGGTCAG+GGG | 0.695895 | 3.4:-39596250 | MS.gene22232:CDS |
| TATCTGAAGTGGGATAGTCA+AGG | 0.700126 | 3.4:+39595031 | None:intergenic |
| AAGGCATGTAAACAAGGACA+GGG | 0.701185 | 3.4:+39595789 | None:intergenic |
| AGTAACGCCAAATTAACCAG+AGG | 0.705261 | 3.4:-39600941 | MS.gene22232:intron |
| CAGGAAGTACTTCTTCCTGG+TGG | 0.705592 | 3.4:-39596271 | MS.gene22232:CDS |
| TTGTTTACATGCCTTCTGGG+CGG | 0.705606 | 3.4:-39595781 | MS.gene22232:CDS |
| ATTCTCCACTGGAATGATGG+CGG | 0.724800 | 3.4:-39595132 | MS.gene22232:CDS |
| GAAGATATGTCCATACAGCG+TGG | 0.743255 | 3.4:-39597172 | MS.gene22232:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTTATCTAATAATAAAA+AGG | - | chr3.4:39596583-39596602 | MS.gene22232:intron | 10.0% |
| !! | ATCTAATTATATTTGTAAAA+TGG | - | chr3.4:39597268-39597287 | MS.gene22232:intron | 10.0% |
| !! | ATTACTTCAAAAAAAAAAAA+AGG | - | chr3.4:39596189-39596208 | MS.gene22232:intron | 10.0% |
| !!! | AAAAAAATTGAAATTTTAGT+TGG | + | chr3.4:39598327-39598346 | None:intergenic | 10.0% |
| !!! | AATTAAATTTTCAAAACAAT+AGG | - | chr3.4:39596642-39596661 | MS.gene22232:intron | 10.0% |
| !! | AATAATAATAATAATTCGTG+TGG | - | chr3.4:39595301-39595320 | MS.gene22232:CDS | 15.0% |
| !! | AGAAAAATACGAAATAAAAA+AGG | + | chr3.4:39597446-39597465 | None:intergenic | 15.0% |
| !! | ATTAGATAAGTCTTTATTAT+AGG | - | chr3.4:39600404-39600423 | MS.gene22232:intron | 15.0% |
| !! | GAAAAATACGAAATAAAAAA+GGG | + | chr3.4:39597445-39597464 | None:intergenic | 15.0% |
| !! | GACAAATAATTAAAATACAT+AGG | + | chr3.4:39600641-39600660 | None:intergenic | 15.0% |
| !! | TAAACATATTGTTAAGTTTA+AGG | - | chr3.4:39595371-39595390 | MS.gene22232:intron | 15.0% |
| !! | TAATTATATTTGTAAAATGG+TGG | - | chr3.4:39597271-39597290 | MS.gene22232:intron | 15.0% |
| !! | TGATAATAAAAAAGGTTATT+TGG | - | chr3.4:39598636-39598655 | MS.gene22232:intron | 15.0% |
| !!! | AGTATTTGAAAATATTTTAC+TGG | - | chr3.4:39598488-39598507 | MS.gene22232:intron | 15.0% |
| !!! | ATTAATTGATTTTTAGTTGT+CGG | - | chr3.4:39595126-39595145 | MS.gene22232:CDS | 15.0% |
| !!! | CCATTTATTTTCTTATTAAA+AGG | - | chr3.4:39598082-39598101 | MS.gene22232:intron | 15.0% |
| !!! | CCTTTTAATAAGAAAATAAA+TGG | + | chr3.4:39598085-39598104 | None:intergenic | 15.0% |
| !!! | CTACTTTTTTCATTTAATAA+TGG | + | chr3.4:39595458-39595477 | None:intergenic | 15.0% |
| !!! | GTTAAAATTTTCAAGAATTT+AGG | - | chr3.4:39596455-39596474 | MS.gene22232:intron | 15.0% |
| !!! | TATTTATATTCTTTTTTGTG+AGG | + | chr3.4:39595216-39595235 | None:intergenic | 15.0% |
| !! | AAACACATTTACATGATTAT+CGG | + | chr3.4:39599269-39599288 | None:intergenic | 20.0% |
| !! | AAGAAAATTATGTGTTTGTT+TGG | - | chr3.4:39596423-39596442 | MS.gene22232:intron | 20.0% |
| !! | ACTCATAAATCAAAATATTG+AGG | + | chr3.4:39597083-39597102 | None:intergenic | 20.0% |
| !! | ATCATTTAGTGTGTAAATTA+AGG | + | chr3.4:39599138-39599157 | None:intergenic | 20.0% |
| !! | CGAAATTTCAAAATAATCTT+TGG | - | chr3.4:39596130-39596149 | MS.gene22232:intron | 20.0% |
| !! | GGTTCATAAAAATAAATACA+AGG | + | chr3.4:39597475-39597494 | None:intergenic | 20.0% |
| !! | TGAAATAAGTAAAAATAGAG+TGG | + | chr3.4:39600320-39600339 | None:intergenic | 20.0% |
| !! | TTGACGTTAAAATATTTCAT+TGG | - | chr3.4:39596214-39596233 | MS.gene22232:CDS | 20.0% |
| !! | TTGTAGTATCAATATGAATA+TGG | + | chr3.4:39600488-39600507 | None:intergenic | 20.0% |
| !!! | AAATTTTCAAGAATTTAGGT+AGG | - | chr3.4:39596459-39596478 | MS.gene22232:intron | 20.0% |
| !!! | ACATTAATATAGTCATTTTG+AGG | + | chr3.4:39596256-39596275 | None:intergenic | 20.0% |
| !!! | ACGTAAATTTCAAGAATTTT+TGG | - | chr3.4:39596486-39596505 | MS.gene22232:intron | 20.0% |
| !!! | ATGTAATGACTTTTTTTTGT+CGG | + | chr3.4:39595845-39595864 | None:intergenic | 20.0% |
| !!! | ATTTGAAAATATTTTACTGG+AGG | - | chr3.4:39598491-39598510 | MS.gene22232:intron | 20.0% |
| !!! | CATTAATATAGTCATTTTGA+GGG | + | chr3.4:39596255-39596274 | None:intergenic | 20.0% |
| !!! | CGCTTTGTTTTTTAATTTTT+TGG | - | chr3.4:39597899-39597918 | MS.gene22232:intron | 20.0% |
| !!! | GCTATAATTTAGTTAATTTG+TGG | - | chr3.4:39600615-39600634 | MS.gene22232:intron | 20.0% |
| !!! | GGAAAAAAATATTTTTACTG+TGG | + | chr3.4:39598680-39598699 | None:intergenic | 20.0% |
| !!! | TACATTTTGAGAATGTATTT+TGG | - | chr3.4:39600083-39600102 | MS.gene22232:intron | 20.0% |
| !!! | TCAAAGAGCATAAAATTATT+GGG | + | chr3.4:39596858-39596877 | None:intergenic | 20.0% |
| !!! | TCTTATTTAGTCTTGTTATT+TGG | - | chr3.4:39598524-39598543 | MS.gene22232:intron | 20.0% |
| !!! | TGTTTTTTAATTTTTTGGTC+AGG | - | chr3.4:39597904-39597923 | MS.gene22232:intron | 20.0% |
| !!! | TTCTGGTTTGATAATAAAAA+AGG | - | chr3.4:39598628-39598647 | MS.gene22232:intron | 20.0% |
| !!! | TTGACTATTTTCTTTTTTTG+AGG | - | chr3.4:39596035-39596054 | MS.gene22232:CDS | 20.0% |
| ! | AAAAACATTTATTGCTGATG+CGG | - | chr3.4:39599937-39599956 | MS.gene22232:intron | 25.0% |
| ! | AAACAATGATTTATTGCTTG+TGG | - | chr3.4:39597156-39597175 | MS.gene22232:CDS | 25.0% |
| ! | AAACATTAGAAGAGATGATT+TGG | + | chr3.4:39598701-39598720 | None:intergenic | 25.0% |
| ! | AACCAAGTACAAAATTTCAA+AGG | + | chr3.4:39598751-39598770 | None:intergenic | 25.0% |
| ! | AATGCATATTAATTGATTGC+AGG | + | chr3.4:39597856-39597875 | None:intergenic | 25.0% |
| ! | ACATGCATGAAATGTTTATT+TGG | - | chr3.4:39595870-39595889 | MS.gene22232:CDS | 25.0% |
| ! | ACTAAATGATTTACTCTCTT+TGG | - | chr3.4:39599148-39599167 | MS.gene22232:intron | 25.0% |
| ! | AGTAAAACTATAGCTCTTAA+AGG | - | chr3.4:39597376-39597395 | MS.gene22232:intron | 25.0% |
| ! | AGTTTACAAAGAATTTGATG+TGG | - | chr3.4:39597307-39597326 | MS.gene22232:intron | 25.0% |
| ! | CAAATTATATCTTTCACTAC+AGG | + | chr3.4:39599192-39599211 | None:intergenic | 25.0% |
| ! | GAAACAATGTGATATATGTA+AGG | - | chr3.4:39595807-39595826 | MS.gene22232:CDS | 25.0% |
| ! | GACTTATCTAATCTTATGTT+TGG | + | chr3.4:39600396-39600415 | None:intergenic | 25.0% |
| ! | GTAAAACTATAGCTCTTAAA+GGG | - | chr3.4:39597377-39597396 | MS.gene22232:intron | 25.0% |
| ! | GTGTTTACTGATCTATAAAT+AGG | - | chr3.4:39599283-39599302 | MS.gene22232:intron | 25.0% |
| ! | GTTTAATTAAGCAACATAAC+AGG | + | chr3.4:39599849-39599868 | None:intergenic | 25.0% |
| ! | GTTTACAAAGAATTTGATGT+GGG | - | chr3.4:39597308-39597327 | MS.gene22232:intron | 25.0% |
| ! | GTTTACTACAAATGATTGTT+AGG | - | chr3.4:39598546-39598565 | MS.gene22232:intron | 25.0% |
| ! | TAAAAGAATTCTTTCATGAC+AGG | - | chr3.4:39599457-39599476 | MS.gene22232:intron | 25.0% |
| ! | TAATCTTTGGTTGTATACTT+TGG | - | chr3.4:39596143-39596162 | MS.gene22232:intron | 25.0% |
| ! | TGGTTAAAAAATAGCTGATA+TGG | - | chr3.4:39596744-39596763 | MS.gene22232:intron | 25.0% |
| ! | TTGTATACTTTGGTCAAAAT+AGG | - | chr3.4:39596153-39596172 | MS.gene22232:intron | 25.0% |
| ! | TTTGCAATATGCTGTAATTA+GGG | + | chr3.4:39599634-39599653 | None:intergenic | 25.0% |
| !! | AATTAAACTAACCTCTTTTC+AGG | - | chr3.4:39599861-39599880 | MS.gene22232:intron | 25.0% |
| !! | ACAAATGATTGTTAGGTTTT+GGG | - | chr3.4:39598553-39598572 | MS.gene22232:intron | 25.0% |
| !! | ATTAAACTAACCTCTTTTCA+GGG | - | chr3.4:39599862-39599881 | MS.gene22232:intron | 25.0% |
| !! | CAAAGAGCATAAAATTATTG+GGG | + | chr3.4:39596857-39596876 | None:intergenic | 25.0% |
| !! | CTCAAAGAGCATAAAATTAT+TGG | + | chr3.4:39596859-39596878 | None:intergenic | 25.0% |
| !! | GTATTTTCTAATGTTCTTCA+TGG | + | chr3.4:39599580-39599599 | None:intergenic | 25.0% |
| !! | GTCGTTTCTTATTTAATAAC+TGG | - | chr3.4:39597711-39597730 | MS.gene22232:intron | 25.0% |
| !! | GTTGATTTCTTTAAATTACC+TGG | + | chr3.4:39599059-39599078 | None:intergenic | 25.0% |
| !! | GTTTCCTATTATTTGAAACT+TGG | - | chr3.4:39597814-39597833 | MS.gene22232:CDS | 25.0% |
| !! | TACAAATGATTGTTAGGTTT+TGG | - | chr3.4:39598552-39598571 | MS.gene22232:intron | 25.0% |
| !!! | AACCTTTGAAATTTTGTACT+TGG | - | chr3.4:39598746-39598765 | MS.gene22232:intron | 25.0% |
| !!! | AGACATTTTTTCAATGTCTT+TGG | + | chr3.4:39600227-39600246 | None:intergenic | 25.0% |
| !!! | ATTTTATGCTCTTTGAGAAA+TGG | - | chr3.4:39596862-39596881 | MS.gene22232:intron | 25.0% |
| !!! | GTCTTTCAATTGTTTTTGAT+AGG | - | chr3.4:39598828-39598847 | MS.gene22232:intron | 25.0% |
| !!! | GTTTAAGGTAGATACATTTT+TGG | - | chr3.4:39595386-39595405 | MS.gene22232:intron | 25.0% |
| !!! | TGGATTAATAAGTTTTTGAG+TGG | - | chr3.4:39595411-39595430 | MS.gene22232:intron | 25.0% |
| !!! | TTTTATGCTCTTTGAGAAAT+GGG | - | chr3.4:39596863-39596882 | MS.gene22232:intron | 25.0% |
| !!! | TTTTTTGAGGTCTTTTTTTG+CGG | - | chr3.4:39596048-39596067 | MS.gene22232:CDS | 25.0% |
| AAAGTTGTTCGGAGATATAA+TGG | - | chr3.4:39599890-39599909 | MS.gene22232:intron | 30.0% | |
| AAATCAGTATTATGGCTGTA+GGG | - | chr3.4:39599511-39599530 | MS.gene22232:intron | 30.0% | |
| AAGTGCAGATAAAAGTTTGT+TGG | - | chr3.4:39596724-39596743 | MS.gene22232:intron | 30.0% | |
| AATGTGATATATGTAAGGTC+CGG | - | chr3.4:39595812-39595831 | MS.gene22232:CDS | 30.0% | |
| ACACTTTGTAACGACTTTAT+TGG | - | chr3.4:39595497-39595516 | MS.gene22232:intron | 30.0% | |
| ACATATTACATTGCCAACAT+TGG | + | chr3.4:39597521-39597540 | None:intergenic | 30.0% | |
| ACCTCTGAATATATATTGAC+AGG | - | chr3.4:39599688-39599707 | MS.gene22232:intron | 30.0% | |
| AGCTCCAAGTTTCAAATAAT+AGG | + | chr3.4:39597821-39597840 | None:intergenic | 30.0% | |
| AGTAAAAATAGAGTGGTTAC+CGG | + | chr3.4:39600313-39600332 | None:intergenic | 30.0% | |
| ATACAATTTCACTGAATGGT+TGG | - | chr3.4:39599031-39599050 | MS.gene22232:intron | 30.0% | |
| ATACATACCTTTCCAAATCA+TGG | + | chr3.4:39598228-39598247 | None:intergenic | 30.0% | |
| ATATTACATTGCCAACATTG+GGG | + | chr3.4:39597519-39597538 | None:intergenic | 30.0% | |
| ATGCACTTTATGATAAGGAT+GGG | - | chr3.4:39598427-39598446 | MS.gene22232:intron | 30.0% | |
| ATGCTGTGAAATCAGTATTA+TGG | - | chr3.4:39599503-39599522 | MS.gene22232:intron | 30.0% | |
| ATTATATTTCCACCTCATCA+TGG | + | chr3.4:39597763-39597782 | None:intergenic | 30.0% | |
| CATATAGCTATGATCAAGTA+GGG | - | chr3.4:39600722-39600741 | MS.gene22232:intron | 30.0% | |
| CATATTACATTGCCAACATT+GGG | + | chr3.4:39597520-39597539 | None:intergenic | 30.0% | |
| CGTTGGATAAAACTAGAAAA+AGG | + | chr3.4:39598350-39598369 | None:intergenic | 30.0% | |
| CTAATCAAAACCATTCAGTA+TGG | + | chr3.4:39596828-39596847 | None:intergenic | 30.0% | |
| GATTGCAATTATCCGTTAAT+GGG | - | chr3.4:39597189-39597208 | MS.gene22232:CDS | 30.0% | |
| GTTTGCAATATGCTGTAATT+AGG | + | chr3.4:39599635-39599654 | None:intergenic | 30.0% | |
| TAAATTAAGGACAAGAAGGT+GGG | + | chr3.4:39599125-39599144 | None:intergenic | 30.0% | |
| TACAATTTCACTGAATGGTT+GGG | - | chr3.4:39599032-39599051 | MS.gene22232:intron | 30.0% | |
| TATGCACTTTATGATAAGGA+TGG | - | chr3.4:39598426-39598445 | MS.gene22232:intron | 30.0% | |
| TCATATAGCTATGATCAAGT+AGG | - | chr3.4:39600721-39600740 | MS.gene22232:intron | 30.0% | |
| TCCAGAATTAAGGTTATTAC+TGG | - | chr3.4:39598853-39598872 | MS.gene22232:intron | 30.0% | |
| TCCTGTCAATATATATTCAG+AGG | + | chr3.4:39599692-39599711 | None:intergenic | 30.0% | |
| TCTGATACAATTTCACTGAA+TGG | - | chr3.4:39599027-39599046 | MS.gene22232:intron | 30.0% | |
| TGATTGCAATTATCCGTTAA+TGG | - | chr3.4:39597188-39597207 | MS.gene22232:CDS | 30.0% | |
| TGTGTAAATTAAGGACAAGA+AGG | + | chr3.4:39599129-39599148 | None:intergenic | 30.0% | |
| TTACATGCATAACAACACAA+TGG | + | chr3.4:39599361-39599380 | None:intergenic | 30.0% | |
| TTGATAGGAATCCAGAATTA+AGG | - | chr3.4:39598843-39598862 | MS.gene22232:intron | 30.0% | |
| ! | AAATGTTTTTCCACTTTCCA+CGG | + | chr3.4:39599927-39599946 | None:intergenic | 30.0% |
| ! | AACTTTTGTTACCAATTCCT+GGG | + | chr3.4:39598463-39598482 | None:intergenic | 30.0% |
| ! | AATATGCATTTTCAGAGTCT+AGG | - | chr3.4:39597866-39597885 | MS.gene22232:intron | 30.0% |
| ! | ATATGCATTTTCAGAGTCTA+GGG | - | chr3.4:39597867-39597886 | MS.gene22232:intron | 30.0% |
| ! | ATGCTTGCTAGTTTAGATTT+GGG | - | chr3.4:39597333-39597352 | MS.gene22232:intron | 30.0% |
| ! | CAAATGATTGTTAGGTTTTG+GGG | - | chr3.4:39598554-39598573 | MS.gene22232:intron | 30.0% |
| ! | TACAAAGTGTAAGTTTTACG+TGG | + | chr3.4:39595487-39595506 | None:intergenic | 30.0% |
| ! | TATTTTGTAGAACATTCGCA+CGG | + | chr3.4:39596348-39596367 | None:intergenic | 30.0% |
| ! | TTTATGCTCTTTGAGAAATG+GGG | - | chr3.4:39596864-39596883 | MS.gene22232:intron | 30.0% |
| ! | TTTGTAAAATGGTGGAAATC+TGG | - | chr3.4:39597279-39597298 | MS.gene22232:intron | 30.0% |
| !! | ATACATATTTTTGTAGCCTG+TGG | - | chr3.4:39597736-39597755 | MS.gene22232:intron | 30.0% |
| !!! | AGGTAGATACATTTTTGGTT+TGG | - | chr3.4:39595391-39595410 | MS.gene22232:intron | 30.0% |
| !!! | CTTTTTTTGCGGAAGTTTAT+GGG | - | chr3.4:39596059-39596078 | MS.gene22232:CDS | 30.0% |
| !!! | GAACACTTTTTTCCTGTTTA+AGG | - | chr3.4:39598104-39598123 | MS.gene22232:intron | 30.0% |
| !!! | TCTTTTTTTGCGGAAGTTTA+TGG | - | chr3.4:39596058-39596077 | MS.gene22232:CDS | 30.0% |
| !!! | TTTTTTTGCGGAAGTTTATG+GGG | - | chr3.4:39596060-39596079 | MS.gene22232:CDS | 30.0% |
| AAACCAGAAATGTAGTGCAA+AGG | + | chr3.4:39598617-39598636 | None:intergenic | 35.0% | |
| AAATTAAGGACAAGAAGGTG+GGG | + | chr3.4:39599124-39599143 | None:intergenic | 35.0% | |
| AAGCATACCTCTGGTTAATT+TGG | + | chr3.4:39595047-39595066 | None:intergenic | 35.0% | |
| ACGAGTAATCAGTGTGAATT+CGG | + | chr3.4:39597964-39597983 | None:intergenic | 35.0% | |
| ACTCCTAAGAACTCTACATT+AGG | + | chr3.4:39600109-39600128 | None:intergenic | 35.0% | |
| AGAACGAGTAAGTGAAACAT+GGG | - | chr3.4:39599389-39599408 | MS.gene22232:intron | 35.0% | |
| AGAATCAAACAAATCCAGCT+GGG | - | chr3.4:39599427-39599446 | MS.gene22232:intron | 35.0% | |
| AGAGGATATCATTTGAACCA+AGG | - | chr3.4:39599996-39600015 | MS.gene22232:intron | 35.0% | |
| AGATTATAGTGAACTGAGCA+GGG | + | chr3.4:39600441-39600460 | None:intergenic | 35.0% | |
| ATATGGTTCCATAGAACTAG+TGG | + | chr3.4:39600471-39600490 | None:intergenic | 35.0% | |
| ATCTTTAGCACACTTTGATC+GGG | + | chr3.4:39595642-39595661 | None:intergenic | 35.0% | |
| ATGAAACTAAAGCATACCTC+TGG | + | chr3.4:39595056-39595075 | None:intergenic | 35.0% | |
| ATGGGGTAATAGTCTCAAAA+TGG | - | chr3.4:39596077-39596096 | MS.gene22232:CDS | 35.0% | |
| ATTGAGGTCAAATACCTGAA+AGG | + | chr3.4:39597067-39597086 | None:intergenic | 35.0% | |
| CAAACACATGAATTACTGTC+GGG | + | chr3.4:39597496-39597515 | None:intergenic | 35.0% | |
| CAATTATCCGTTAATGGGAT+TGG | - | chr3.4:39597194-39597213 | MS.gene22232:CDS | 35.0% | |
| CACAGTAACACAATATACTG+AGG | + | chr3.4:39597562-39597581 | None:intergenic | 35.0% | |
| CAGCTATGCACTTTATGATA+AGG | - | chr3.4:39598422-39598441 | MS.gene22232:intron | 35.0% | |
| CAGTTCACTATAATCTACAC+AGG | - | chr3.4:39600445-39600464 | MS.gene22232:intron | 35.0% | |
| CATCTTTAGCACACTTTGAT+CGG | + | chr3.4:39595643-39595662 | None:intergenic | 35.0% | |
| CATGATTATCGGTCATAGAA+AGG | + | chr3.4:39599258-39599277 | None:intergenic | 35.0% | |
| CCGCTTAAAGAAAACAATCA+CGG | + | chr3.4:39598902-39598921 | None:intergenic | 35.0% | |
| CTCATAGCATACACAGTAAA+GGG | + | chr3.4:39600595-39600614 | None:intergenic | 35.0% | |
| CTTATCATAAAGTGCATAGC+TGG | + | chr3.4:39598424-39598443 | None:intergenic | 35.0% | |
| GAAATCAGTATTATGGCTGT+AGG | - | chr3.4:39599510-39599529 | MS.gene22232:intron | 35.0% | |
| GCAAACACATGAATTACTGT+CGG | + | chr3.4:39597497-39597516 | None:intergenic | 35.0% | |
| GCATATAATACCTTCTACGT+TGG | + | chr3.4:39598367-39598386 | None:intergenic | 35.0% | |
| GCCAGTAATAACCTTAATTC+TGG | + | chr3.4:39598857-39598876 | None:intergenic | 35.0% | |
| GCTGTAATTAGGGTAAAACT+AGG | + | chr3.4:39599624-39599643 | None:intergenic | 35.0% | |
| GTAAATTAAGGACAAGAAGG+TGG | + | chr3.4:39599126-39599145 | None:intergenic | 35.0% | |
| GTAGTTGCAGATACATCTTA+TGG | - | chr3.4:39600127-39600146 | MS.gene22232:intron | 35.0% | |
| GTGTGATTTGAAAATGAGAC+TGG | - | chr3.4:39596889-39596908 | MS.gene22232:intron | 35.0% | |
| GTTATAAATACCCTAGCCAA+GGG | - | chr3.4:39599761-39599780 | MS.gene22232:intron | 35.0% | |
| TAAAGTGCATAGCTGGAATA+AGG | + | chr3.4:39598417-39598436 | None:intergenic | 35.0% | |
| TACATACGAGATATCTGAAG+TGG | + | chr3.4:39600961-39600980 | None:intergenic | 35.0% | |
| TAGAATCAAACAAATCCAGC+TGG | - | chr3.4:39599426-39599445 | MS.gene22232:intron | 35.0% | |
| TAGATTATAGTGAACTGAGC+AGG | + | chr3.4:39600442-39600461 | None:intergenic | 35.0% | |
| TCAGTGGTATTTATGCAGAA+TGG | - | chr3.4:39598984-39599003 | MS.gene22232:CDS | 35.0% | |
| TGCATGATTCCTAAAAAGGA+GGG | + | chr3.4:39597674-39597693 | None:intergenic | 35.0% | |
| TGGGGTAATAGTCTCAAAAT+GGG | - | chr3.4:39596078-39596097 | MS.gene22232:CDS | 35.0% | |
| TGGTATTTATGCAGAATGGA+GGG | - | chr3.4:39598988-39599007 | MS.gene22232:CDS | 35.0% | |
| TGTTATAAATACCCTAGCCA+AGG | - | chr3.4:39599760-39599779 | MS.gene22232:intron | 35.0% | |
| TGTTATCTACTATGCAAGTG+TGG | + | chr3.4:39598284-39598303 | None:intergenic | 35.0% | |
| TTCTAGATCAACAACGATTG+TGG | + | chr3.4:39597115-39597134 | None:intergenic | 35.0% | |
| TTGGTGTACTTAAAGCAAAG+AGG | - | chr3.4:39599978-39599997 | MS.gene22232:intron | 35.0% | |
| TTGTCTTCGTAAGCTTAACT+CGG | - | chr3.4:39595778-39595797 | MS.gene22232:CDS | 35.0% | |
| TTTAGGCCTCACATTTCTTT+GGG | - | chr3.4:39600565-39600584 | MS.gene22232:intron | 35.0% | |
| TTTCTAATGTTCTTCATGGC+AGG | + | chr3.4:39599576-39599595 | None:intergenic | 35.0% | |
| ! | AATACCACTGAAGTACCTTA+TGG | + | chr3.4:39598975-39598994 | None:intergenic | 35.0% |
| ! | AATGAGACTGGTTGATCTAT+TGG | - | chr3.4:39596901-39596920 | MS.gene22232:intron | 35.0% |
| ! | ACATACGAGATATCTGAAGT+GGG | + | chr3.4:39600960-39600979 | None:intergenic | 35.0% |
| ! | ACTTTTGTTACCAATTCCTG+GGG | + | chr3.4:39598462-39598481 | None:intergenic | 35.0% |
| ! | ATACCACTGAAGTACCTTAT+GGG | + | chr3.4:39598974-39598993 | None:intergenic | 35.0% |
| ! | ATGAGACTGGTTGATCTATT+GGG | - | chr3.4:39596902-39596921 | MS.gene22232:intron | 35.0% |
| ! | ATTCACACTGATTACTCGTT+TGG | - | chr3.4:39597965-39597984 | MS.gene22232:intron | 35.0% |
| ! | CAACTTTTGTTACCAATTCC+TGG | + | chr3.4:39598464-39598483 | None:intergenic | 35.0% |
| ! | CAGGAATTGGTAACAAAAGT+TGG | - | chr3.4:39598462-39598481 | MS.gene22232:intron | 35.0% |
| ! | CCGTGATTGTTTTCTTTAAG+CGG | - | chr3.4:39598899-39598918 | MS.gene22232:intron | 35.0% |
| ! | GATGCTTGCTAGTTTAGATT+TGG | - | chr3.4:39597332-39597351 | MS.gene22232:intron | 35.0% |
| ! | TATACGACCATGATTTGGAA+AGG | - | chr3.4:39598218-39598237 | MS.gene22232:intron | 35.0% |
| ! | TGCTTGCTAGTTTAGATTTG+GGG | - | chr3.4:39597334-39597353 | MS.gene22232:intron | 35.0% |
| ! | TTATGCTCTTTGAGAAATGG+GGG | - | chr3.4:39596865-39596884 | MS.gene22232:intron | 35.0% |
| ! | TTGCTTTAAGTACACCAAGA+GGG | + | chr3.4:39599976-39599995 | None:intergenic | 35.0% |
| ! | TTGGCTAGGGTATTTATAAC+AGG | + | chr3.4:39599761-39599780 | None:intergenic | 35.0% |
| ! | TTTCAGTTTTTAATCGCGCT+AGG | - | chr3.4:39600335-39600354 | MS.gene22232:intron | 35.0% |
| ! | TTTGCTTTAAGTACACCAAG+AGG | + | chr3.4:39599977-39599996 | None:intergenic | 35.0% |
| !! | TTTTCCTGTTTAAGGTTGCA+TGG | - | chr3.4:39598112-39598131 | MS.gene22232:intron | 35.0% |
| !!! | CTAGTTTTATCCAACGTAGA+AGG | - | chr3.4:39598354-39598373 | MS.gene22232:intron | 35.0% |
| !!! | GATTTTTAGTTGTCGGTGTT+TGG | - | chr3.4:39595133-39595152 | MS.gene22232:CDS | 35.0% |
| !!! | TTTTTTTGTCGGATGTGAAC+CGG | + | chr3.4:39595834-39595853 | None:intergenic | 35.0% |
| AAACATAGAGAGACCAGGTT+AGG | - | chr3.4:39599322-39599341 | MS.gene22232:intron | 40.0% | |
| AACATAGAGAGACCAGGTTA+GGG | - | chr3.4:39599323-39599342 | MS.gene22232:intron | 40.0% | |
| AACTCCATGCAACCTTAAAC+AGG | + | chr3.4:39598119-39598138 | None:intergenic | 40.0% | |
| AAGGCATGTAAACAAGGACA+GGG | + | chr3.4:39600192-39600211 | None:intergenic | 40.0% | |
| AATATCAAGACCCTTGGCTA+GGG | + | chr3.4:39599774-39599793 | None:intergenic | 40.0% | |
| AATTGAAAGACCACGCTGTA+TGG | + | chr3.4:39598819-39598838 | None:intergenic | 40.0% | |
| ACCAGGTTAGGGGATAAAAA+TGG | - | chr3.4:39599334-39599353 | MS.gene22232:intron | 40.0% | |
| ACTATATCTACCTGTGTCCT+AGG | + | chr3.4:39599799-39599818 | None:intergenic | 40.0% | |
| ACTTCAAGATGCTTCCTTTC+AGG | - | chr3.4:39597050-39597069 | MS.gene22232:intron | 40.0% | |
| AGATCTCGATTAGAAGATCG+AGG | + | chr3.4:39597236-39597255 | None:intergenic | 40.0% | |
| AGATTCAGTACCTTGTGTCT+CGG | - | chr3.4:39600671-39600690 | MS.gene22232:intron | 40.0% | |
| AGGTTGTTCTCTTAGAGTCT+AGG | - | chr3.4:39597924-39597943 | MS.gene22232:intron | 40.0% | |
| AGTAACGCCAAATTAACCAG+AGG | - | chr3.4:39595037-39595056 | MS.gene22232:CDS | 40.0% | |
| ATGATTCCTAAAAAGGAGGG+AGG | + | chr3.4:39597671-39597690 | None:intergenic | 40.0% | |
| ATGCCTTTGCACTACATTTC+TGG | - | chr3.4:39598611-39598630 | MS.gene22232:intron | 40.0% | |
| CAAAGAAATGTGAGGCCTAA+AGG | + | chr3.4:39600566-39600585 | None:intergenic | 40.0% | |
| CATTCAGCCAATCCCATTAA+CGG | + | chr3.4:39597204-39597223 | None:intergenic | 40.0% | |
| CCTCATAGCATACACAGTAA+AGG | + | chr3.4:39600596-39600615 | None:intergenic | 40.0% | |
| CCTTTACTGTGTATGCTATG+AGG | - | chr3.4:39600593-39600612 | MS.gene22232:intron | 40.0% | |
| CGAAGAACAGGTTATCTACT+GGG | + | chr3.4:39600780-39600799 | None:intergenic | 40.0% | |
| CTACTTCCTTAATCTCCACA+AGG | - | chr3.4:39600156-39600175 | MS.gene22232:intron | 40.0% | |
| CTGTTTGTAGCTCTTTGCTA+TGG | - | chr3.4:39596946-39596965 | MS.gene22232:CDS | 40.0% | |
| CTTTAGGCCTCACATTTCTT+TGG | - | chr3.4:39600564-39600583 | MS.gene22232:intron | 40.0% | |
| GAGAACGAGTAAGTGAAACA+TGG | - | chr3.4:39599388-39599407 | MS.gene22232:intron | 40.0% | |
| GATCTCGATTAGAAGATCGA+GGG | + | chr3.4:39597235-39597254 | None:intergenic | 40.0% | |
| GCTGTGCATGATTCCTAAAA+AGG | + | chr3.4:39597678-39597697 | None:intergenic | 40.0% | |
| GGCTCGGATATAAATTCACT+GGG | - | chr3.4:39600697-39600716 | MS.gene22232:intron | 40.0% | |
| GGTTGTTCTCTTAGAGTCTA+GGG | - | chr3.4:39597925-39597944 | MS.gene22232:intron | 40.0% | |
| GTGCATGATTCCTAAAAAGG+AGG | + | chr3.4:39597675-39597694 | None:intergenic | 40.0% | |
| GTGGTATTTATGCAGAATGG+AGG | - | chr3.4:39598987-39599006 | MS.gene22232:CDS | 40.0% | |
| TAAGGTAGAGGAATCCAACT+AGG | + | chr3.4:39598586-39598605 | None:intergenic | 40.0% | |
| TAATGGAGTAAAAGTGACCG+TGG | - | chr3.4:39599907-39599926 | MS.gene22232:intron | 40.0% | |
| TAGATAACCTGTTCTTCGCA+GGG | - | chr3.4:39600782-39600801 | MS.gene22232:intron | 40.0% | |
| TCACCATCTGTTATTGTCGT+TGG | - | chr3.4:39596994-39597013 | MS.gene22232:CDS | 40.0% | |
| TCAGGGTCACAAAAGTTGTT+CGG | - | chr3.4:39599879-39599898 | MS.gene22232:intron | 40.0% | |
| TGAAAACCTCACCTACCTTT+AGG | - | chr3.4:39600548-39600567 | MS.gene22232:intron | 40.0% | |
| TGATAGAGATGCAGAATTCG+TGG | + | chr3.4:39595908-39595927 | None:intergenic | 40.0% | |
| TGGCCTAATGTAGAGTTCTT+AGG | - | chr3.4:39600103-39600122 | MS.gene22232:intron | 40.0% | |
| TGTGCTATACGACCATGATT+TGG | - | chr3.4:39598213-39598232 | MS.gene22232:intron | 40.0% | |
| TGTGGCATGAAATGAATTGC+AGG | - | chr3.4:39595319-39595338 | MS.gene22232:intron | 40.0% | |
| TGTGTGTGAACCATACTGAA+TGG | - | chr3.4:39596815-39596834 | MS.gene22232:intron | 40.0% | |
| TTACTGTGGAAATGCATAGC+AGG | + | chr3.4:39598666-39598685 | None:intergenic | 40.0% | |
| TTAGAGTCTAGGGAAAGACT+TGG | - | chr3.4:39597935-39597954 | MS.gene22232:intron | 40.0% | |
| ! | AAGGCATCACTATAAGGTAG+AGG | + | chr3.4:39598598-39598617 | None:intergenic | 40.0% |
| ! | ACTTTTGTGACCCTGAAAAG+AGG | + | chr3.4:39599875-39599894 | None:intergenic | 40.0% |
| ! | TATCTGAAGTGGGATAGTCA+AGG | + | chr3.4:39600950-39600969 | None:intergenic | 40.0% |
| ! | TCCTTGTTTACATGCCTTCT+GGG | - | chr3.4:39600194-39600213 | MS.gene22232:intron | 40.0% |
| !! | AGTGCAAAGGCATCACTATA+AGG | + | chr3.4:39598604-39598623 | None:intergenic | 40.0% |
| !! | CTCTCTTTGGTGTTACATAC+AGG | - | chr3.4:39599161-39599180 | MS.gene22232:intron | 40.0% |
| !! | TCCATTTTTATCCCCTAACC+TGG | + | chr3.4:39599338-39599357 | None:intergenic | 40.0% |
| AAATAGAGTGGTTACCGGTG+AGG | + | chr3.4:39600308-39600327 | None:intergenic | 45.0% | |
| AACCACATGAACTGTACGAG+AGG | - | chr3.4:39600746-39600765 | MS.gene22232:intron | 45.0% | |
| AAGGGTCTTGATATTCGCCT+AGG | - | chr3.4:39599779-39599798 | MS.gene22232:intron | 45.0% | |
| AAGGTTGCATGGAGTTTGCA+AGG | - | chr3.4:39598123-39598142 | MS.gene22232:intron | 45.0% | |
| AATCCACTTGCTTCCGTGAT+TGG | - | chr3.4:39598148-39598167 | MS.gene22232:intron | 45.0% | |
| ACATAGAGAGACCAGGTTAG+GGG | - | chr3.4:39599324-39599343 | MS.gene22232:intron | 45.0% | |
| AGATAACCTGTTCTTCGCAG+GGG | - | chr3.4:39600783-39600802 | MS.gene22232:intron | 45.0% | |
| ATCAAACAAATCCAGCTGGG+AGG | - | chr3.4:39599430-39599449 | MS.gene22232:intron | 45.0% | |
| ATCCACTTGCTTCCGTGATT+GGG | - | chr3.4:39598149-39598168 | MS.gene22232:intron | 45.0% | |
| ATCCCCACTAGTACGGTAAA+GGG | + | chr3.4:39598188-39598207 | None:intergenic | 45.0% | |
| ATGTTGAAGACTCATGCACC+TGG | + | chr3.4:39599231-39599250 | None:intergenic | 45.0% | |
| ATTCTCCACTGGAATGATGG+CGG | - | chr3.4:39600846-39600865 | MS.gene22232:intron | 45.0% | |
| ATTTATGCAGAATGGAGGGC+TGG | - | chr3.4:39598992-39599011 | MS.gene22232:CDS | 45.0% | |
| CAGAGTTATCCCCACTAGTA+CGG | + | chr3.4:39598195-39598214 | None:intergenic | 45.0% | |
| CCACCAACGACAATAACAGA+TGG | + | chr3.4:39597000-39597019 | None:intergenic | 45.0% | |
| CCATCTGTTATTGTCGTTGG+TGG | - | chr3.4:39596997-39597016 | MS.gene22232:CDS | 45.0% | |
| GAAATGTGAGGCCTAAAGGT+AGG | + | chr3.4:39600562-39600581 | None:intergenic | 45.0% | |
| GAAGATATGTCCATACAGCG+TGG | - | chr3.4:39598806-39598825 | MS.gene22232:intron | 45.0% | |
| GAATATCAAGACCCTTGGCT+AGG | + | chr3.4:39599775-39599794 | None:intergenic | 45.0% | |
| GAATCAAGTTCCCCAGGAAT+TGG | - | chr3.4:39598449-39598468 | MS.gene22232:intron | 45.0% | |
| GCAACAAGTATGAGCTATCC+AGG | - | chr3.4:39600808-39600827 | MS.gene22232:intron | 45.0% | |
| GCGAAGAACAGGTTATCTAC+TGG | + | chr3.4:39600781-39600800 | None:intergenic | 45.0% | |
| GGGCTCGGATATAAATTCAC+TGG | - | chr3.4:39600696-39600715 | MS.gene22232:intron | 45.0% | |
| GTAAAAGTGACCGTGGAAAG+TGG | - | chr3.4:39599914-39599933 | MS.gene22232:intron | 45.0% | |
| GTAGAGGAATCCAACTAGGT+TGG | + | chr3.4:39598582-39598601 | None:intergenic | 45.0% | |
| GTAGATAACCTGTTCTTCGC+AGG | - | chr3.4:39600781-39600800 | MS.gene22232:intron | 45.0% | |
| TACCCCTTTACCGTACTAGT+GGG | - | chr3.4:39598182-39598201 | MS.gene22232:intron | 45.0% | |
| TAGGCGAATATCAAGACCCT+TGG | + | chr3.4:39599780-39599799 | None:intergenic | 45.0% | |
| TATCCCCACTAGTACGGTAA+AGG | + | chr3.4:39598189-39598208 | None:intergenic | 45.0% | |
| TCAAACAAATCCAGCTGGGA+GGG | - | chr3.4:39599431-39599450 | MS.gene22232:intron | 45.0% | |
| TCATGGCAGGTCTATGCAAA+GGG | + | chr3.4:39599563-39599582 | None:intergenic | 45.0% | |
| TCATGTGTTTGCCCCAATGT+TGG | - | chr3.4:39597505-39597524 | MS.gene22232:CDS | 45.0% | |
| TGCATTCTCCACTGGAATGA+TGG | - | chr3.4:39600843-39600862 | MS.gene22232:intron | 45.0% | |
| TGTAAAGTCGTCTCATAGCC+AGG | - | chr3.4:39599210-39599229 | MS.gene22232:intron | 45.0% | |
| TTACCCCTTTACCGTACTAG+TGG | - | chr3.4:39598181-39598200 | MS.gene22232:intron | 45.0% | |
| TTCATGGCAGGTCTATGCAA+AGG | + | chr3.4:39599564-39599583 | None:intergenic | 45.0% | |
| TTGATATTCGCCTAGGACAC+AGG | - | chr3.4:39599786-39599805 | MS.gene22232:intron | 45.0% | |
| TTGTTTACATGCCTTCTGGG+CGG | - | chr3.4:39600197-39600216 | MS.gene22232:intron | 45.0% | |
| ! | AGAGCTGGATTTGTTTCAGC+CGG | - | chr3.4:39600906-39600925 | MS.gene22232:intron | 45.0% |
| ! | GAAGGCATGTAAACAAGGAC+AGG | + | chr3.4:39600193-39600212 | None:intergenic | 45.0% |
| ! | GATTTGTTTCAGCCGGTGAT+GGG | - | chr3.4:39600913-39600932 | MS.gene22232:intron | 45.0% |
| ! | GTCCTTGTTTACATGCCTTC+TGG | - | chr3.4:39600193-39600212 | MS.gene22232:intron | 45.0% |
| ! | TCTGTTATTGTCGTTGGTGG+TGG | - | chr3.4:39597000-39597019 | MS.gene22232:CDS | 45.0% |
| ! | TTGCCCATAAGGTACTTCAG+TGG | - | chr3.4:39598968-39598987 | MS.gene22232:CDS | 45.0% |
| !! | CACAAGGTACTGAATCTGCA+TGG | + | chr3.4:39600668-39600687 | None:intergenic | 45.0% |
| !! | TACACAGGCCACTAGTTCTA+TGG | - | chr3.4:39600460-39600479 | MS.gene22232:intron | 45.0% |
| !! | TGACAGGAAGTACTTCTTCC+TGG | - | chr3.4:39599704-39599723 | MS.gene22232:intron | 45.0% |
| !! | TTTGGCTTTCCTGTTGACCT+GGG | - | chr3.4:39597983-39598002 | MS.gene22232:intron | 45.0% |
| AACTGAGCAGGGTGAACTAG+AGG | + | chr3.4:39600430-39600449 | None:intergenic | 50.0% | |
| AAGCTGCCATCGCTGAACTT+GGG | - | chr3.4:39600035-39600054 | MS.gene22232:intron | 50.0% | |
| AATGCACCATGGACAGATCC+TGG | + | chr3.4:39600829-39600848 | None:intergenic | 50.0% | |
| ACCCCTTTACCGTACTAGTG+GGG | - | chr3.4:39598183-39598202 | MS.gene22232:intron | 50.0% | |
| AGCCTCTCGTACAGTTCATG+TGG | + | chr3.4:39600751-39600770 | None:intergenic | 50.0% | |
| AGCTATCCAGGATCTGTCCA+TGG | - | chr3.4:39600820-39600839 | MS.gene22232:intron | 50.0% | |
| AGCTTTACCATGATGCTCCC+AGG | + | chr3.4:39598003-39598022 | None:intergenic | 50.0% | |
| ATGTTAGCAGTGTGCAGGAG+AGG | - | chr3.4:39596971-39596990 | MS.gene22232:CDS | 50.0% | |
| CAAACAAATCCAGCTGGGAG+GGG | - | chr3.4:39599432-39599451 | MS.gene22232:intron | 50.0% | |
| CCTAAAAAGGAGGGAGGTAG+AGG | + | chr3.4:39597665-39597684 | None:intergenic | 50.0% | |
| GAGTCTAGGGAAAGACTTGG+TGG | - | chr3.4:39597938-39597957 | MS.gene22232:intron | 50.0% | |
| GCTATTGTTGCTGTCCCTCT+TGG | - | chr3.4:39599959-39599978 | MS.gene22232:intron | 50.0% | |
| GGTCAGCCCAAAGAAATGTG+AGG | + | chr3.4:39600574-39600593 | None:intergenic | 50.0% | |
| GTACGACTTACACACGTGTC+TGG | - | chr3.4:39595954-39595973 | MS.gene22232:CDS | 50.0% | |
| GTACTTCTTCCTGGTGGTCA+CGG | - | chr3.4:39599713-39599732 | MS.gene22232:intron | 50.0% | |
| TCAGTACCTTGTGTCTCGGT+GGG | - | chr3.4:39600675-39600694 | MS.gene22232:intron | 50.0% | |
| TCCCCACTAGTACGGTAAAG+GGG | + | chr3.4:39598187-39598206 | None:intergenic | 50.0% | |
| TGATTTCCACCCTTGACTGC+AGG | - | chr3.4:39598935-39598954 | MS.gene22232:CDS | 50.0% | |
| TGGCAATGTTAGCAGTGTGC+AGG | - | chr3.4:39596966-39596985 | MS.gene22232:CDS | 50.0% | |
| TTCACTGAATGGTTGGGACC+AGG | - | chr3.4:39599038-39599057 | MS.gene22232:intron | 50.0% | |
| TTCAGTACCTTGTGTCTCGG+TGG | - | chr3.4:39600674-39600693 | MS.gene22232:intron | 50.0% | |
| TTCCAGTGGAGAATGCACCA+TGG | + | chr3.4:39600840-39600859 | None:intergenic | 50.0% | |
| ! | CCTCTACCTCCCTCCTTTTT+AGG | - | chr3.4:39597662-39597681 | MS.gene22232:intron | 50.0% |
| ! | GCCCAGAAGGCATGTAAACA+AGG | + | chr3.4:39600198-39600217 | None:intergenic | 50.0% |
| ! | GGATTTGTTTCAGCCGGTGA+TGG | - | chr3.4:39600912-39600931 | MS.gene22232:intron | 50.0% |
| ! | GTGCAGCCTTGTGGAGATTA+AGG | + | chr3.4:39600165-39600184 | None:intergenic | 50.0% |
| ! | TGGTCACGGTCTTATGGTCA+GGG | - | chr3.4:39599727-39599746 | MS.gene22232:intron | 50.0% |
| !! | CAGGAAGTACTTCTTCCTGG+TGG | - | chr3.4:39599707-39599726 | MS.gene22232:intron | 50.0% |
| !! | GTTTGGCTTTCCTGTTGACC+TGG | - | chr3.4:39597982-39598001 | MS.gene22232:intron | 50.0% |
| !! | TATTGTCGTTGGTGGTGGCA+TGG | - | chr3.4:39597005-39597024 | MS.gene22232:CDS | 50.0% |
| !!! | TTTTGGGGTGCCAACCTAGT+TGG | - | chr3.4:39598569-39598588 | MS.gene22232:intron | 50.0% |
| AAGGACAAGAAGGTGGGGCA+GGG | + | chr3.4:39599119-39599138 | None:intergenic | 55.0% | |
| ACCATAAGACCGTGACCACC+AGG | + | chr3.4:39599725-39599744 | None:intergenic | 55.0% | |
| AGATTGCAGGATGCGTGTGC+TGG | - | chr3.4:39600873-39600892 | MS.gene22232:intron | 55.0% | |
| AGCTGCCATCGCTGAACTTG+GGG | - | chr3.4:39600036-39600055 | MS.gene22232:intron | 55.0% | |
| ATGCGTGTGCTGGAGCGATA+TGG | - | chr3.4:39600883-39600902 | MS.gene22232:intron | 55.0% | |
| ATGGCAGCTTCCTTCCAGTC+TGG | + | chr3.4:39600025-39600044 | None:intergenic | 55.0% | |
| CACTTGCTTCCGTGATTGGG+AGG | - | chr3.4:39598152-39598171 | MS.gene22232:intron | 55.0% | |
| CAGTACCTTGTGTCTCGGTG+GGG | - | chr3.4:39600676-39600695 | MS.gene22232:intron | 55.0% | |
| CATGATGCTCCCAGGTCAAC+AGG | + | chr3.4:39597995-39598014 | None:intergenic | 55.0% | |
| CCTTCCTAATGCGTCCTCAC+CGG | - | chr3.4:39600291-39600310 | MS.gene22232:intron | 55.0% | |
| CTCCCAATCACGGAAGCAAG+TGG | + | chr3.4:39598154-39598173 | None:intergenic | 55.0% | |
| GAAGCCATCTCTCCCATCAC+CGG | + | chr3.4:39600928-39600947 | None:intergenic | 55.0% | |
| GAAGCTGCCATCGCTGAACT+TGG | - | chr3.4:39600034-39600053 | MS.gene22232:intron | 55.0% | |
| GGATGGGAATCAAGTTCCCC+AGG | - | chr3.4:39598443-39598462 | MS.gene22232:intron | 55.0% | |
| GTAGCCTGTGGTCCATGATG+AGG | - | chr3.4:39597748-39597767 | MS.gene22232:intron | 55.0% | |
| GTCCATGGTGCATTCTCCAC+TGG | - | chr3.4:39600835-39600854 | MS.gene22232:intron | 55.0% | |
| GTGAGGCCTAAAGGTAGGTG+AGG | + | chr3.4:39600557-39600576 | None:intergenic | 55.0% | |
| GTTACCGGTGAGGACGCATT+AGG | + | chr3.4:39600298-39600317 | None:intergenic | 55.0% | |
| TAACCCCAGCCTCCCAATCA+CGG | + | chr3.4:39598164-39598183 | None:intergenic | 55.0% | |
| TAAGGACAAGAAGGTGGGGC+AGG | + | chr3.4:39599120-39599139 | None:intergenic | 55.0% | |
| TCCAACCCCAAGTTCAGCGA+TGG | + | chr3.4:39600044-39600063 | None:intergenic | 55.0% | |
| TCCACCTCATCATGGACCAC+AGG | + | chr3.4:39597755-39597774 | None:intergenic | 55.0% | |
| TCCTGGTGGTCACGGTCTTA+TGG | - | chr3.4:39599721-39599740 | MS.gene22232:intron | 55.0% | |
| TGGCAGCTTCCTTCCAGTCT+GGG | + | chr3.4:39600024-39600043 | None:intergenic | 55.0% | |
| TTCAGCCGCCATCATTCCAG+TGG | + | chr3.4:39600854-39600873 | None:intergenic | 55.0% | |
| TTCCACCCTTGACTGCAGGT+TGG | - | chr3.4:39598939-39598958 | MS.gene22232:CDS | 55.0% | |
| TTGAACCAAGGCTCCCAGAC+TGG | - | chr3.4:39600008-39600027 | MS.gene22232:intron | 55.0% | |
| TTGCTTCCCCTGCGAAGAAC+AGG | + | chr3.4:39600792-39600811 | None:intergenic | 55.0% | |
| ! | ACCCTTGACTGCAGGTTGGA+GGG | - | chr3.4:39598943-39598962 | MS.gene22232:CDS | 55.0% |
| ! | GGTCACGGTCTTATGGTCAG+GGG | - | chr3.4:39599728-39599747 | MS.gene22232:intron | 55.0% |
| ! | GTGGTCACGGTCTTATGGTC+AGG | - | chr3.4:39599726-39599745 | MS.gene22232:intron | 55.0% |
| ! | TCTTTTACACCCCTCCCAGC+TGG | + | chr3.4:39599444-39599463 | None:intergenic | 55.0% |
| !! | CTGTTGACCTGGGAGCATCA+TGG | - | chr3.4:39597993-39598012 | MS.gene22232:CDS | 55.0% |
| !! | TGATGGCGGCTGAAGATTGC+AGG | - | chr3.4:39600860-39600879 | MS.gene22232:intron | 55.0% |
| ACCAAGGCTCCCAGACTGGA+AGG | - | chr3.4:39600012-39600031 | MS.gene22232:intron | 60.0% | |
| AGGACAAGAAGGTGGGGCAG+GGG | + | chr3.4:39599118-39599137 | None:intergenic | 60.0% | |
| CCCCTCCAACCTGCAGTCAA+GGG | + | chr3.4:39598947-39598966 | None:intergenic | 60.0% | |
| CCGGTGAGGACGCATTAGGA+AGG | + | chr3.4:39600294-39600313 | None:intergenic | 60.0% | |
| CTCCAACCTGCAGTCAAGGG+TGG | + | chr3.4:39598944-39598963 | None:intergenic | 60.0% | |
| CTTCCGTGATTGGGAGGCTG+GGG | - | chr3.4:39598158-39598177 | MS.gene22232:intron | 60.0% | |
| GCCATCGCTGAACTTGGGGT+TGG | - | chr3.4:39600040-39600059 | MS.gene22232:intron | 60.0% | |
| GCCTGTGGTCCATGATGAGG+TGG | - | chr3.4:39597751-39597770 | MS.gene22232:intron | 60.0% | |
| GCTGGAGCGATATGGAGAGC+TGG | - | chr3.4:39600891-39600910 | MS.gene22232:intron | 60.0% | |
| GCTTCCGTGATTGGGAGGCT+GGG | - | chr3.4:39598157-39598176 | MS.gene22232:intron | 60.0% | |
| GTTGGAGGGGCTTGCCCATA+AGG | - | chr3.4:39598957-39598976 | MS.gene22232:CDS | 60.0% | |
| TCCTTCCAGTCTGGGAGCCT+TGG | + | chr3.4:39600016-39600035 | None:intergenic | 60.0% | |
| TCTTTGGCAAGCCGCCCAGA+AGG | + | chr3.4:39600211-39600230 | None:intergenic | 60.0% | |
| TGCTTCCGTGATTGGGAGGC+TGG | - | chr3.4:39598156-39598175 | MS.gene22232:intron | 60.0% | |
| ! | CACCCTTGACTGCAGGTTGG+AGG | - | chr3.4:39598942-39598961 | MS.gene22232:CDS | 60.0% |
| ! | CCCTTGACTGCAGGTTGGAG+GGG | - | chr3.4:39598944-39598963 | MS.gene22232:CDS | 60.0% |
| !! | TCAGCCGGTGATGGGAGAGA+TGG | - | chr3.4:39600921-39600940 | MS.gene22232:intron | 60.0% |
| !! | TCGTTGGTGGTGGCATGGCT+GGG | - | chr3.4:39597010-39597029 | MS.gene22232:CDS | 60.0% |
| CAGGGTGACGTGCAGCCTTG+TGG | + | chr3.4:39600174-39600193 | None:intergenic | 65.0% | |
| CCTTGTGTCTCGGTGGGGCT+CGG | - | chr3.4:39600681-39600700 | MS.gene22232:intron | 65.0% | |
| GACAAGAAGGTGGGGCAGGG+GGG | + | chr3.4:39599116-39599135 | None:intergenic | 65.0% | |
| GCCCCTCCAACCTGCAGTCA+AGG | + | chr3.4:39598948-39598967 | None:intergenic | 65.0% | |
| GGACAAGAAGGTGGGGCAGG+GGG | + | chr3.4:39599117-39599136 | None:intergenic | 65.0% | |
| !! | GTCGTTGGTGGTGGCATGGC+TGG | - | chr3.4:39597009-39597028 | MS.gene22232:CDS | 65.0% |
| CCGAGCCCCACCGAGACACA+AGG | + | chr3.4:39600684-39600703 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 39595019 | 39600981 | 39595019 | ID=MS.gene22232 |
| chr3.4 | mRNA | 39595019 | 39600981 | 39595019 | ID=MS.gene22232.t1;Parent=MS.gene22232 |
| chr3.4 | exon | 39600942 | 39600981 | 39600942 | ID=MS.gene22232.t1.exon1;Parent=MS.gene22232.t1 |
| chr3.4 | CDS | 39600942 | 39600981 | 39600942 | ID=cds.MS.gene22232.t1;Parent=MS.gene22232.t1 |
| chr3.4 | exon | 39598929 | 39599044 | 39598929 | ID=MS.gene22232.t1.exon2;Parent=MS.gene22232.t1 |
| chr3.4 | CDS | 39598929 | 39599044 | 39598929 | ID=cds.MS.gene22232.t1;Parent=MS.gene22232.t1 |
| chr3.4 | exon | 39597986 | 39598074 | 39597986 | ID=MS.gene22232.t1.exon3;Parent=MS.gene22232.t1 |
| chr3.4 | CDS | 39597986 | 39598074 | 39597986 | ID=cds.MS.gene22232.t1;Parent=MS.gene22232.t1 |
| chr3.4 | exon | 39597761 | 39597874 | 39597761 | ID=MS.gene22232.t1.exon4;Parent=MS.gene22232.t1 |
| chr3.4 | CDS | 39597761 | 39597874 | 39597761 | ID=cds.MS.gene22232.t1;Parent=MS.gene22232.t1 |
| chr3.4 | exon | 39597488 | 39597575 | 39597488 | ID=MS.gene22232.t1.exon5;Parent=MS.gene22232.t1 |
| chr3.4 | CDS | 39597488 | 39597575 | 39597488 | ID=cds.MS.gene22232.t1;Parent=MS.gene22232.t1 |
| chr3.4 | exon | 39597136 | 39597221 | 39597136 | ID=MS.gene22232.t1.exon6;Parent=MS.gene22232.t1 |
| chr3.4 | CDS | 39597136 | 39597221 | 39597136 | ID=cds.MS.gene22232.t1;Parent=MS.gene22232.t1 |
| chr3.4 | exon | 39596941 | 39597043 | 39596941 | ID=MS.gene22232.t1.exon7;Parent=MS.gene22232.t1 |
| chr3.4 | CDS | 39596941 | 39597043 | 39596941 | ID=cds.MS.gene22232.t1;Parent=MS.gene22232.t1 |
| chr3.4 | exon | 39596193 | 39596290 | 39596193 | ID=MS.gene22232.t1.exon8;Parent=MS.gene22232.t1 |
| chr3.4 | CDS | 39596193 | 39596290 | 39596193 | ID=cds.MS.gene22232.t1;Parent=MS.gene22232.t1 |
| chr3.4 | exon | 39595688 | 39596117 | 39595688 | ID=MS.gene22232.t1.exon9;Parent=MS.gene22232.t1 |
| chr3.4 | CDS | 39595688 | 39596117 | 39595688 | ID=cds.MS.gene22232.t1;Parent=MS.gene22232.t1 |
| chr3.4 | exon | 39595019 | 39595327 | 39595019 | ID=MS.gene22232.t1.exon10;Parent=MS.gene22232.t1 |
| chr3.4 | CDS | 39595019 | 39595327 | 39595019 | ID=cds.MS.gene22232.t1;Parent=MS.gene22232.t1 |
| Gene Sequence |
| Protein sequence |
