Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46961.t1 | XP_013459605.1 | 98.7 | 454 | 6 | 0 | 1 | 454 | 37 | 490 | 3.80E-261 | 910.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46961.t1 | Q9SKX5 | 80.3 | 452 | 89 | 0 | 3 | 454 | 39 | 490 | 1.1e-221 | 770.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46961.t1 | A0A072UW35 | 98.7 | 454 | 6 | 0 | 1 | 454 | 37 | 490 | 2.7e-261 | 910.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46961 | MS.gene92026 | PPI |
| MS.gene47679 | MS.gene46961 | PPI |
| MS.gene061581 | MS.gene46961 | PPI |
| MS.gene46961 | MS.gene038090 | PPI |
| MS.gene46961 | MS.gene017025 | PPI |
| MS.gene46961 | MS.gene049679 | PPI |
| MS.gene46317 | MS.gene46961 | PPI |
| MS.gene46961 | MS.gene47679 | PPI |
| MS.gene46961 | MS.gene008352 | PPI |
| MS.gene019144 | MS.gene46961 | PPI |
| MS.gene46961 | MS.gene46317 | PPI |
| MS.gene05030 | MS.gene46961 | PPI |
| MS.gene22232 | MS.gene46961 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46961.t1 | MTR_3g449620 | 98.678 | 454 | 6 | 0 | 1 | 454 | 37 | 490 | 0.0 | 925 |
| MS.gene46961.t1 | MTR_5g090300 | 84.340 | 447 | 68 | 1 | 8 | 454 | 44 | 488 | 0.0 | 786 |
| MS.gene46961.t1 | MTR_3g064370 | 64.035 | 456 | 162 | 1 | 1 | 454 | 37 | 492 | 0.0 | 616 |
| MS.gene46961.t1 | MTR_3g064370 | 62.410 | 415 | 154 | 1 | 42 | 454 | 1 | 415 | 0.0 | 549 |
| MS.gene46961.t1 | MTR_3g064370 | 67.422 | 353 | 115 | 0 | 1 | 353 | 37 | 389 | 1.84e-180 | 509 |
| MS.gene46961.t1 | MTR_3g113170 | 34.056 | 461 | 249 | 12 | 2 | 418 | 891 | 1340 | 1.24e-61 | 217 |
| MS.gene46961.t1 | MTR_3g113170 | 34.056 | 461 | 249 | 12 | 2 | 418 | 891 | 1340 | 1.31e-61 | 217 |
| MS.gene46961.t1 | MTR_1g023510 | 34.183 | 471 | 252 | 14 | 2 | 418 | 875 | 1341 | 3.03e-60 | 213 |
| MS.gene46961.t1 | MTR_5g087920 | 69.600 | 125 | 38 | 0 | 244 | 368 | 12 | 136 | 1.42e-54 | 178 |
| MS.gene46961.t1 | MTR_3g055090 | 31.963 | 438 | 262 | 13 | 1 | 418 | 168 | 589 | 9.48e-51 | 183 |
| MS.gene46961.t1 | MTR_6g084700 | 32.473 | 465 | 259 | 15 | 1 | 431 | 229 | 672 | 2.01e-49 | 180 |
| MS.gene46961.t1 | MTR_8g464450 | 31.323 | 431 | 260 | 14 | 8 | 418 | 178 | 592 | 5.47e-44 | 164 |
| MS.gene46961.t1 | MTR_1g050535 | 31.409 | 433 | 263 | 12 | 8 | 420 | 225 | 643 | 2.00e-42 | 160 |
| MS.gene46961.t1 | MTR_1g050535 | 31.409 | 433 | 263 | 12 | 8 | 420 | 225 | 643 | 2.49e-42 | 160 |
| MS.gene46961.t1 | MTR_3g033000 | 26.777 | 422 | 265 | 15 | 17 | 415 | 33 | 433 | 9.29e-27 | 112 |
| MS.gene46961.t1 | MTR_3g033000 | 26.455 | 378 | 234 | 15 | 17 | 371 | 33 | 389 | 7.63e-19 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46961.t1 | AT2G43020 | 80.222 | 450 | 89 | 0 | 5 | 454 | 41 | 490 | 0.0 | 774 |
| MS.gene46961.t1 | AT3G59050 | 80.176 | 454 | 87 | 1 | 1 | 454 | 38 | 488 | 0.0 | 754 |
| MS.gene46961.t1 | AT1G65840 | 62.826 | 460 | 165 | 3 | 1 | 454 | 38 | 497 | 0.0 | 604 |
| MS.gene46961.t1 | AT4G16310 | 33.195 | 482 | 246 | 15 | 2 | 418 | 628 | 1098 | 5.83e-59 | 209 |
| MS.gene46961.t1 | AT4G16310 | 33.195 | 482 | 246 | 15 | 2 | 418 | 628 | 1098 | 5.83e-59 | 209 |
| MS.gene46961.t1 | AT4G16310 | 33.195 | 482 | 246 | 15 | 2 | 418 | 628 | 1098 | 5.83e-59 | 209 |
| MS.gene46961.t1 | AT4G16310 | 33.195 | 482 | 246 | 15 | 2 | 418 | 628 | 1098 | 5.83e-59 | 209 |
| MS.gene46961.t1 | AT4G16310 | 33.195 | 482 | 246 | 15 | 2 | 418 | 628 | 1098 | 5.83e-59 | 209 |
| MS.gene46961.t1 | AT3G13682 | 33.178 | 428 | 256 | 14 | 8 | 418 | 176 | 590 | 5.92e-47 | 173 |
| MS.gene46961.t1 | AT3G10390 | 32.287 | 446 | 255 | 13 | 1 | 420 | 194 | 618 | 1.39e-46 | 172 |
| MS.gene46961.t1 | AT3G10390 | 32.287 | 446 | 255 | 13 | 1 | 420 | 194 | 618 | 2.48e-46 | 172 |
| MS.gene46961.t1 | AT3G10390 | 32.287 | 446 | 255 | 13 | 1 | 420 | 246 | 670 | 3.74e-46 | 172 |
| MS.gene46961.t1 | AT3G10390 | 32.287 | 446 | 255 | 13 | 1 | 420 | 246 | 670 | 4.68e-46 | 171 |
| MS.gene46961.t1 | AT1G62830 | 32.755 | 461 | 269 | 16 | 1 | 437 | 275 | 718 | 1.59e-45 | 169 |
| MS.gene46961.t1 | AT5G13700 | 26.872 | 454 | 283 | 15 | 17 | 450 | 30 | 454 | 3.77e-34 | 134 |
| MS.gene46961.t1 | AT4G29720 | 23.783 | 534 | 284 | 15 | 1 | 429 | 14 | 529 | 3.02e-29 | 120 |
Find 154 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTTGTTTACATGCCTTC+TGG | 0.170041 | 3.1:-31881900 | MS.gene46961:CDS |
| GCCAGTAATAACCTTAATTC+TGG | 0.235503 | 3.1:+31883261 | None:intergenic |
| ACTTCAAGATGCTTCCTTTC+AGG | 0.247076 | 3.1:-31886197 | MS.gene46961:intron |
| GTCATTGGTGGTGGCATGGC+TGG | 0.253200 | 3.1:-31886238 | None:intergenic |
| TGCTTCCGTGATTGGGAGGC+TGG | 0.257155 | 3.1:-31883960 | MS.gene46961:CDS |
| TTGATAGGAATCCAGAATTA+AGG | 0.262962 | 3.1:-31883272 | MS.gene46961:intron |
| TGGCCTAATGTAGAGTTCTT+AGG | 0.292763 | 3.1:-31881990 | MS.gene46961:CDS |
| CCCTGGTGGTCACGGTCTTA+TGG | 0.297326 | 3.1:-31882372 | MS.gene46961:CDS |
| TCCTTGTTTACATGCCTTCT+GGG | 0.312872 | 3.1:-31881899 | MS.gene46961:CDS |
| GTGCAGCCTTGTGGAGATTA+AGG | 0.314384 | 3.1:+31881931 | None:intergenic |
| AATACCACTGAAGTACCTTA+TGG | 0.326701 | 3.1:+31883143 | None:intergenic |
| TCCTTCCAGTCTGGGAGCCT+TGG | 0.329966 | 3.1:+31882080 | None:intergenic |
| ATGGCAGCTTCCTTCCAGTC+TGG | 0.360763 | 3.1:+31882071 | None:intergenic |
| AATCCACTTGCTTCCGTGAT+TGG | 0.366361 | 3.1:-31883968 | MS.gene46961:CDS |
| TGTGCTATACGACCATGATT+TGG | 0.368647 | 3.1:-31883903 | MS.gene46961:CDS |
| ATTCACACTGATTACTCGTT+TGG | 0.376822 | 3.1:-31884150 | MS.gene46961:CDS |
| AAAGTTGTTCGGAGATATAA+TGG | 0.377389 | 3.1:-31882203 | MS.gene46961:CDS |
| TTGGCTAGGGTATTTATAAC+AGG | 0.381256 | 3.1:+31882335 | None:intergenic |
| GTTTGGCTTTCCTGTTGACC+TGG | 0.381528 | 3.1:-31884133 | MS.gene46961:CDS |
| CACCCTTGACTGCAGGTTGG+AGG | 0.385422 | 3.1:-31883173 | MS.gene46961:intron |
| ACGAGTAATCAGTGTGAATT+CGG | 0.387049 | 3.1:+31884154 | None:intergenic |
| CCCTTGACTGCAGGTTGGAG+GGG | 0.387852 | 3.1:-31883171 | MS.gene46961:intron |
| ACCCTTGACTGCAGGTTGGA+GGG | 0.394812 | 3.1:-31883172 | MS.gene46961:intron |
| ATCCACTTGCTTCCGTGATT+GGG | 0.395016 | 3.1:-31883967 | MS.gene46961:CDS |
| GTGGTCACGGTCTTATGGTC+AGG | 0.401367 | 3.1:-31882367 | MS.gene46961:CDS |
| GTAGTTGCAGATACATCTTA+TGG | 0.402239 | 3.1:-31881966 | MS.gene46961:CDS |
| ATCTTCAGCCGCCATCATTC+CGG | 0.404811 | 3.1:+31881239 | None:intergenic |
| TTGCTTCCCCTGCGAAGAAC+AGG | 0.412914 | 3.1:+31881304 | None:intergenic |
| CATGATGCTCCCAGGTCAAC+AGG | 0.413656 | 3.1:+31884123 | None:intergenic |
| CCTTGTGTCTCGGTGGGGCT+CGG | 0.415357 | 3.1:-31881412 | MS.gene46961:CDS |
| GTTGGAGGGGCTTGCCCATA+AGG | 0.416665 | 3.1:-31883158 | MS.gene46961:CDS |
| ATCCCCACTAGTACGGTAAA+GGG | 0.417780 | 3.1:+31883931 | None:intergenic |
| GAAGCTGCCATCGCTGAACT+TGG | 0.421827 | 3.1:-31882059 | MS.gene46961:CDS |
| TACAATTTCACTGAATGGTT+GGG | 0.424536 | 3.1:-31883083 | MS.gene46961:CDS |
| GAATCAAGTTCCCCAGGAAT+TGG | 0.428359 | 3.1:-31883666 | MS.gene46961:CDS |
| AATTGAAAGACCACGCTGTA+TGG | 0.437376 | 3.1:+31883299 | None:intergenic |
| GGATTTGTTTCAGCCGGTGA+TGG | 0.439407 | 3.1:-31881181 | MS.gene46961:CDS |
| GCTTCCGTGATTGGGAGGCT+GGG | 0.440070 | 3.1:-31883959 | MS.gene46961:CDS |
| AGGTTGTTCTCTTAGAGTCT+AGG | 0.441740 | 3.1:-31884191 | MS.gene46961:CDS |
| TCAGAGTCACAAAAGTTGTT+CGG | 0.444089 | 3.1:-31882214 | MS.gene46961:intron |
| TATGCACTTTATGATAAGAA+TGG | 0.446358 | 3.1:-31883689 | MS.gene46961:CDS |
| ATACCACTGAAGTACCTTAT+GGG | 0.446467 | 3.1:+31883144 | None:intergenic |
| GCTATTGTTGCTGTCCCTCT+TGG | 0.453416 | 3.1:-31882134 | MS.gene46961:CDS |
| TGGCAGCTTCCTTCCAGTCT+GGG | 0.455520 | 3.1:+31882072 | None:intergenic |
| ACTCCTAAGAACTCTACATT+AGG | 0.462175 | 3.1:+31881987 | None:intergenic |
| ATGCGTGTGCTGGAGCGATA+TGG | 0.464060 | 3.1:-31881210 | MS.gene46961:CDS |
| TGATGGCGGCTGAAGATTGC+AGG | 0.464362 | 3.1:-31881233 | MS.gene46961:CDS |
| TCTGATACAATTTCACTGAA+TGG | 0.465141 | 3.1:-31883088 | MS.gene46961:CDS |
| ATACAATTTCACTGAATGGT+TGG | 0.469296 | 3.1:-31883084 | MS.gene46961:CDS |
| TTGAACCAAGGCTCCCAGAC+TGG | 0.469830 | 3.1:-31882085 | MS.gene46961:CDS |
| TCATTGGTGGTGGCATGGCT+GGG | 0.470492 | 3.1:-31886237 | None:intergenic |
| TCAGTACCTTGTGTCTCGGT+GGG | 0.472113 | 3.1:-31881418 | MS.gene46961:CDS |
| GCAACAAGTATGAGCTATCC+AGG | 0.482634 | 3.1:-31881285 | MS.gene46961:CDS |
| TGCATTCTCCACCGGAATGA+TGG | 0.483940 | 3.1:-31881250 | MS.gene46961:CDS |
| TCAGCCGGTGATGGGAGAAA+TGG | 0.486040 | 3.1:-31881172 | MS.gene46961:CDS |
| ACTATATCTACCTGTGTCCT+AGG | 0.488050 | 3.1:+31882297 | None:intergenic |
| ATGCACTTTATGATAAGAAT+GGG | 0.489672 | 3.1:-31883688 | MS.gene46961:CDS |
| CAGGAATTGGTAACAAAAGT+TGG | 0.495412 | 3.1:-31883653 | MS.gene46961:CDS |
| GAAGGCATGTAAACAAGGAC+AGG | 0.496470 | 3.1:+31881903 | None:intergenic |
| ATACATACCTTTCCAAATCA+TGG | 0.498622 | 3.1:+31883891 | None:intergenic |
| AATGCACCATGGACAGATCC+TGG | 0.499465 | 3.1:+31881267 | None:intergenic |
| GTAGATAACCTGTTCTTCGC+AGG | 0.500303 | 3.1:-31881312 | MS.gene46961:CDS |
| GTAAAAGTGACCGTGGAAAG+TGG | 0.500352 | 3.1:-31882179 | MS.gene46961:CDS |
| GGTTGTTCTCTTAGAGTCTA+GGG | 0.501117 | 3.1:-31884190 | MS.gene46961:CDS |
| AAGCTGCCATCGCTGAACTT+GGG | 0.502576 | 3.1:-31882058 | MS.gene46961:CDS |
| TTGATATTCGCCTAGGACAC+AGG | 0.503732 | 3.1:-31882307 | MS.gene46961:intron |
| TTCACTGAATGGTTGGGACC+AGG | 0.505370 | 3.1:-31883077 | MS.gene46961:intron |
| CGAGCTGGATTTGTTTCAGC+CGG | 0.505755 | 3.1:-31881187 | MS.gene46961:CDS |
| GCGAAGAACAGGTTATCTAC+TGG | 0.506541 | 3.1:+31881315 | None:intergenic |
| GTACTTCTCCCTGGTGGTCA+CGG | 0.506945 | 3.1:-31882380 | MS.gene46961:CDS |
| TTTGGCTTTCCTGTTGACCT+GGG | 0.506960 | 3.1:-31884132 | MS.gene46961:CDS |
| TCAGTGGTATTTATGCAGAA+TGG | 0.507222 | 3.1:-31883131 | MS.gene46961:CDS |
| ACCATAAGACCGTGACCACC+AGG | 0.507322 | 3.1:+31882371 | None:intergenic |
| GCCATCGCTGAACTTGGGGT+TGG | 0.509174 | 3.1:-31882053 | MS.gene46961:CDS |
| GGGCTCGGATATAAATTCAC+TGG | 0.510358 | 3.1:-31881397 | MS.gene46961:CDS |
| TGGTCACGGTCTTATGGTCA+GGG | 0.511034 | 3.1:-31882366 | MS.gene46961:CDS |
| CGAAGAACAGGTTATCTACT+GGG | 0.513240 | 3.1:+31881316 | None:intergenic |
| GTTACCGGTGAGGAAGCATT+AGG | 0.513639 | 3.1:+31881798 | None:intergenic |
| GATTTGTTTCAGCCGGTGAT+GGG | 0.513807 | 3.1:-31881180 | MS.gene46961:CDS |
| TATCCCCACTAGTACGGTAA+AGG | 0.515136 | 3.1:+31883930 | None:intergenic |
| AGATTGCAGGATGCGTGTGC+TGG | 0.516520 | 3.1:-31881220 | MS.gene46961:CDS |
| TACCCCTTTACCGTACTAGT+GGG | 0.524830 | 3.1:-31883934 | MS.gene46961:CDS |
| TGACAGGAAGTACTTCTCCC+TGG | 0.530151 | 3.1:-31882389 | MS.gene46961:intron |
| AGCTGCCATCGCTGAACTTG+GGG | 0.530403 | 3.1:-31882057 | MS.gene46961:CDS |
| CTTCCGTGATTGGGAGGCTG+GGG | 0.536451 | 3.1:-31883958 | MS.gene46961:CDS |
| AAGGTTGCATGGAGTTTGCA+AGG | 0.539925 | 3.1:-31883993 | MS.gene46961:CDS |
| CATATAGCTATGATCAAGTA+GGG | 0.542982 | 3.1:-31881371 | MS.gene46961:CDS |
| ATTTATGCAGAATGGAGGGC+TGG | 0.545277 | 3.1:-31883123 | MS.gene46961:CDS |
| TCATATAGCTATGATCAAGT+AGG | 0.546091 | 3.1:-31881372 | MS.gene46961:CDS |
| CACTTGCTTCCGTGATTGGG+AGG | 0.546419 | 3.1:-31883964 | MS.gene46961:CDS |
| GTCCATGGTGCATTCTCCAC+CGG | 0.547012 | 3.1:-31881258 | MS.gene46961:CDS |
| GAATGGGAATCAAGTTCCCC+AGG | 0.547047 | 3.1:-31883672 | MS.gene46961:CDS |
| AGCTTTACCATGATGCTCCC+AGG | 0.548394 | 3.1:+31884115 | None:intergenic |
| TTCAGTACCTTGTGTCTCGG+TGG | 0.550816 | 3.1:-31881419 | MS.gene46961:CDS |
| GAATATCAAGACCCTTGGCT+AGG | 0.556541 | 3.1:+31882321 | None:intergenic |
| GCCCAGAAGGCATGTAAACA+AGG | 0.556908 | 3.1:+31881898 | None:intergenic |
| CAGGGTGACGTGCAGCCTTG+TGG | 0.561709 | 3.1:+31881922 | None:intergenic |
| CAGAGTTATCCCCACTAGTA+CGG | 0.561719 | 3.1:+31883924 | None:intergenic |
| CCTTCCTAATGCTTCCTCAC+CGG | 0.564781 | 3.1:-31881802 | MS.gene46961:intron |
| GAGTCTAGGGAAAGACTTGG+TGG | 0.566001 | 3.1:-31884177 | MS.gene46961:CDS |
| GAAAACATTTATTGCTGATG+CGG | 0.570570 | 3.1:-31882156 | MS.gene46961:CDS |
| TCTTTGGCAAGCCGCCCAGA+AGG | 0.571780 | 3.1:+31881885 | None:intergenic |
| AATATCAAGACCCTTGGCTA+GGG | 0.576929 | 3.1:+31882322 | None:intergenic |
| ACCAAGGCTCCCAGACTGGA+AGG | 0.580515 | 3.1:-31882081 | MS.gene46961:CDS |
| TAACCCCAGCCTCCCAATCA+CGG | 0.581134 | 3.1:+31883955 | None:intergenic |
| GAGGCCATTTCTCCCATCAC+CGG | 0.582511 | 3.1:+31881168 | None:intergenic |
| CTGTTGACCTGGGAGCATCA+TGG | 0.583662 | 3.1:-31884122 | MS.gene46961:intron |
| GGCTCGGATATAAATTCACT+GGG | 0.586636 | 3.1:-31881396 | MS.gene46961:CDS |
| TAGATAACCTGTTCTTCGCA+GGG | 0.589108 | 3.1:-31881311 | MS.gene46961:CDS |
| GTGGTATTTATGCAGAATGG+AGG | 0.590217 | 3.1:-31883128 | MS.gene46961:CDS |
| TGTTATAAATACCCTAGCCA+AGG | 0.590267 | 3.1:-31882333 | MS.gene46961:CDS |
| TACATACGAGATATCTGAAG+TGG | 0.590541 | 3.1:+31881135 | None:intergenic |
| TAAAAGTGACCGTGGAAAGT+GGG | 0.591051 | 3.1:-31882178 | MS.gene46961:CDS |
| TAGGCGAATATCAAGACCCT+TGG | 0.592447 | 3.1:+31882316 | None:intergenic |
| TCCAACCCCAAGTTCAGCGA+TGG | 0.600909 | 3.1:+31882052 | None:intergenic |
| AGCCTCTCGTACAGTTCATG+TGG | 0.600917 | 3.1:+31881345 | None:intergenic |
| AGCTATCCAGGATCTGTCCA+TGG | 0.605077 | 3.1:-31881273 | MS.gene46961:CDS |
| ATTGAGGTCAAATACCTGAA+AGG | 0.606411 | 3.1:+31886183 | None:intergenic |
| TTCAGCCGCCATCATTCCGG+TGG | 0.607572 | 3.1:+31881242 | None:intergenic |
| AAGGGTCTTGATATTCGCCT+AGG | 0.607787 | 3.1:-31882314 | MS.gene46961:CDS |
| AGATTCAGTACCTTGTGTCT+CGG | 0.611152 | 3.1:-31881422 | MS.gene46961:CDS |
| TTACCCCTTTACCGTACTAG+TGG | 0.612175 | 3.1:-31883935 | MS.gene46961:CDS |
| TGGTATTTATGCAGAATGGA+GGG | 0.621034 | 3.1:-31883127 | MS.gene46961:CDS |
| TTGCTTTAAGTACACCAAGA+GGG | 0.622687 | 3.1:+31882120 | None:intergenic |
| TTGGTGTACTTAAAGCAAAG+AGG | 0.628228 | 3.1:-31882115 | MS.gene46961:CDS |
| AGAGGATATCATTTGAACCA+AGG | 0.632510 | 3.1:-31882097 | MS.gene46961:CDS |
| GCTGGAGCGATATGGCGAGC+TGG | 0.637460 | 3.1:-31881202 | MS.gene46961:CDS |
| CCGAGCCCCACCGAGACACA+AGG | 0.638728 | 3.1:+31881412 | None:intergenic |
| TATACGACCATGATTTGGAA+AGG | 0.638994 | 3.1:-31883898 | MS.gene46961:intron |
| CTACTTCCTTAATCTCCACA+AGG | 0.640054 | 3.1:-31881937 | MS.gene46961:CDS |
| CTCCCAATCACGGAAGCAAG+TGG | 0.641232 | 3.1:+31883965 | None:intergenic |
| CCGGTGAGGAAGCATTAGGA+AGG | 0.650028 | 3.1:+31881802 | None:intergenic |
| ATTCTCCACCGGAATGATGG+CGG | 0.650475 | 3.1:-31881247 | MS.gene46961:CDS |
| ACCCCTTTACCGTACTAGTG+GGG | 0.654223 | 3.1:-31883933 | MS.gene46961:CDS |
| TAATGGAGTAAAAGTGACCG+TGG | 0.655219 | 3.1:-31882186 | MS.gene46961:CDS |
| TCCCCACTAGTACGGTAAAG+GGG | 0.656059 | 3.1:+31883932 | None:intergenic |
| AAATAGAGTGGTTACCGGTG+AGG | 0.656355 | 3.1:+31881788 | None:intergenic |
| CAGTACCTTGTGTCTCGGTG+GGG | 0.656791 | 3.1:-31881417 | MS.gene46961:CDS |
| TTAGAGTCTAGGGAAAGACT+TGG | 0.664498 | 3.1:-31884180 | MS.gene46961:CDS |
| TATCTGAAGTGGGATAGTCA+AGG | 0.665598 | 3.1:+31881146 | None:intergenic |
| ACATACGAGATATCTGAAGT+GGG | 0.666300 | 3.1:+31881136 | None:intergenic |
| AACCACATGAACTGTACGAG+AGG | 0.669837 | 3.1:-31881347 | MS.gene46961:CDS |
| GTTATAAATACCCTAGCCAA+GGG | 0.673303 | 3.1:-31882332 | MS.gene46961:CDS |
| AGATAACCTGTTCTTCGCAG+GGG | 0.674456 | 3.1:-31881310 | MS.gene46961:CDS |
| TTCCGGTGGAGAATGCACCA+TGG | 0.680901 | 3.1:+31881256 | None:intergenic |
| TTTGCTTTAAGTACACCAAG+AGG | 0.681981 | 3.1:+31882119 | None:intergenic |
| TTGCCCATAAGGTACTTCAG+TGG | 0.691649 | 3.1:-31883147 | MS.gene46961:CDS |
| GGTCACGGTCTTATGGTCAG+GGG | 0.695895 | 3.1:-31882365 | MS.gene46961:CDS |
| CTGAAGTGGGATAGTCAAGG+AGG | 0.698975 | 3.1:+31881149 | None:intergenic |
| CCATAAGACCGTGACCACCA+GGG | 0.700855 | 3.1:+31882372 | None:intergenic |
| AAGGCATGTAAACAAGGACA+GGG | 0.701185 | 3.1:+31881904 | None:intergenic |
| TTGTTTACATGCCTTCTGGG+CGG | 0.705606 | 3.1:-31881896 | MS.gene46961:CDS |
| CAGGAAGTACTTCTCCCTGG+TGG | 0.730430 | 3.1:-31882386 | MS.gene46961:CDS |
| GAAGATATGTCCATACAGCG+TGG | 0.743255 | 3.1:-31883309 | MS.gene46961:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAATAAGAAATAAAAA+AGG | + | chr3.1:31882599-31882618 | None:intergenic | 10.0% |
| !! | GAAAAATAAGAAATAAAAAA+GGG | + | chr3.1:31882598-31882617 | None:intergenic | 10.0% |
| !!! | AAAAAAATTGAAATTTTAGT+TGG | + | chr3.1:31883568-31883587 | None:intergenic | 10.0% |
| !! | ATTAGATAAGTCTTTATTAT+AGG | - | chr3.1:31885668-31885687 | MS.gene46961:intron | 15.0% |
| !! | GACAAATAATTAAAATACAT+AGG | + | chr3.1:31885905-31885924 | None:intergenic | 15.0% |
| !! | GATTCATAAAAATAAATACA+AGG | + | chr3.1:31882628-31882647 | None:intergenic | 15.0% |
| !! | TGATAATAAAAAAGGTTATT+TGG | - | chr3.1:31883878-31883897 | MS.gene46961:intron | 15.0% |
| !! | TTGCATTGAAATTTATAATT+CGG | - | chr3.1:31882446-31882465 | MS.gene46961:intron | 15.0% |
| !!! | CCATTTATTTTCTTATTAAA+AGG | - | chr3.1:31883323-31883342 | MS.gene46961:CDS | 15.0% |
| !!! | CCTTTTAATAAGAAAATAAA+TGG | + | chr3.1:31883326-31883345 | None:intergenic | 15.0% |
| !!! | TCTAATTAAATGATTTTCAT+TGG | - | chr3.1:31882253-31882272 | MS.gene46961:intron | 15.0% |
| !!! | TCTAATTAAATGATTTTCAT+TGG | + | chr3.1:31882272-31882253 | None:intergenic | 15.0% |
| !! | AAAAACAAATAACTACTTTC+AGG | + | chr3.1:31882964-31882983 | None:intergenic | 20.0% |
| !! | AATAATAAAGATGTAGGATA+TGG | + | chr3.1:31881530-31881549 | None:intergenic | 20.0% |
| !! | AATACCTAAATTAAGAAATG+TGG | - | chr3.1:31882166-31882185 | MS.gene46961:CDS | 20.0% |
| !! | ATACCTAAATTAAGAAATGT+GGG | - | chr3.1:31882167-31882186 | MS.gene46961:CDS | 20.0% |
| !! | ATCATTTAGTGTGTAAATTA+AGG | + | chr3.1:31884379-31884398 | None:intergenic | 20.0% |
| !! | CATCTTAAGTGTTAAAAAAA+AGG | - | chr3.1:31881474-31881493 | MS.gene46961:intron | 20.0% |
| !! | GTTTAATTAAGAAACATAAC+AGG | + | chr3.1:31885113-31885132 | None:intergenic | 20.0% |
| !! | TAAAACTATAGCTCTTATAA+GGG | - | chr3.1:31882530-31882549 | MS.gene46961:intron | 20.0% |
| !! | TCAGTCTATTCTAATTAAAA+TGG | - | chr3.1:31882303-31882322 | MS.gene46961:intron | 20.0% |
| !! | TGAAATAAGTAAAAATAGAG+TGG | + | chr3.1:31885584-31885603 | None:intergenic | 20.0% |
| !! | TGCATTGAAATTTATAATTC+GGG | - | chr3.1:31882447-31882466 | MS.gene46961:intron | 20.0% |
| !! | TTGTAGTATCAATATGAATA+TGG | + | chr3.1:31885752-31885771 | None:intergenic | 20.0% |
| !!! | AGTATTTGAAACTATTTTAC+TGG | - | chr3.1:31883730-31883749 | MS.gene46961:intron | 20.0% |
| !!! | ATAGACAATTCTTTTTCAAT+GGG | - | chr3.1:31882042-31882061 | MS.gene46961:CDS | 20.0% |
| !!! | CTTTATTATTAGCCTAAAAA+GGG | - | chr3.1:31881540-31881559 | MS.gene46961:intron | 20.0% |
| !!! | GCTTTAATTTAGTTAATTTG+TGG | - | chr3.1:31885879-31885898 | MS.gene46961:intron | 20.0% |
| !!! | GGAAAAAAATATTTTTACTG+TGG | + | chr3.1:31883922-31883941 | None:intergenic | 20.0% |
| !!! | TACATTTTGAGAATGTATTT+TGG | - | chr3.1:31885347-31885366 | MS.gene46961:intron | 20.0% |
| !!! | TATAGACAATTCTTTTTCAA+TGG | - | chr3.1:31882041-31882060 | MS.gene46961:CDS | 20.0% |
| !!! | TCTTATTTAGTCTTGATATT+TGG | - | chr3.1:31883766-31883785 | MS.gene46961:intron | 20.0% |
| !!! | TCTTTATTATTAGCCTAAAA+AGG | - | chr3.1:31881539-31881558 | MS.gene46961:intron | 20.0% |
| !!! | TTCTGGTTTGATAATAAAAA+AGG | - | chr3.1:31883870-31883889 | MS.gene46961:intron | 20.0% |
| !!! | TTTTCTTTTATATTTGCTTG+AGG | - | chr3.1:31882936-31882955 | MS.gene46961:intron | 20.0% |
| !!! | TTTTTTTTAATTGTTTGGTC+AGG | - | chr3.1:31883146-31883165 | MS.gene46961:CDS | 20.0% |
| ! | AAAGGGCAAAAAAATCAAAA+TGG | + | chr3.1:31881911-31881930 | None:intergenic | 25.0% |
| ! | AAATTAAGAAATGTGGGATA+TGG | - | chr3.1:31882173-31882192 | MS.gene46961:CDS | 25.0% |
| ! | AACCAAGTACAAAATTTCAA+AGG | + | chr3.1:31883993-31884012 | None:intergenic | 25.0% |
| ! | AATGCATATTAATTGACTAC+AGG | + | chr3.1:31883096-31883115 | None:intergenic | 25.0% |
| ! | ACTAAATGATTTACTCTCTT+TGG | - | chr3.1:31884389-31884408 | MS.gene46961:intron | 25.0% |
| ! | AGACTATTAATCTTACTTGT+TGG | - | chr3.1:31881703-31881722 | MS.gene46961:intron | 25.0% |
| ! | ATACAAATTGCATAGTTTCA+TGG | + | chr3.1:31882009-31882028 | None:intergenic | 25.0% |
| ! | ATGCACTTTATGATAAGAAT+GGG | - | chr3.1:31883669-31883688 | MS.gene46961:CDS | 25.0% |
| ! | CAAATTATATCTTTCACTAC+AGG | + | chr3.1:31884433-31884452 | None:intergenic | 25.0% |
| ! | CAACACAATTACATGATTAT+CGG | + | chr3.1:31884510-31884529 | None:intergenic | 25.0% |
| ! | GACTTATCTAATCTTATGTT+TGG | + | chr3.1:31885660-31885679 | None:intergenic | 25.0% |
| ! | GCAAAAAAATCAAAATGGTA+TGG | + | chr3.1:31881906-31881925 | None:intergenic | 25.0% |
| ! | GCTCATAAATCAAAATATTG+AGG | + | chr3.1:31881193-31881212 | None:intergenic | 25.0% |
| ! | GTAAAACTATAGCTCTTATA+AGG | - | chr3.1:31882529-31882548 | MS.gene46961:intron | 25.0% |
| ! | GTCTATTCTAATTAAAATGG+TGG | - | chr3.1:31882306-31882325 | MS.gene46961:intron | 25.0% |
| ! | GTTTACTACAAATGATTGTT+AGG | - | chr3.1:31883788-31883807 | MS.gene46961:intron | 25.0% |
| ! | TACATGCAACAATTGAATTT+AGG | - | chr3.1:31882562-31882581 | MS.gene46961:intron | 25.0% |
| ! | TAGGCTAATAATAAAGATGT+AGG | + | chr3.1:31881536-31881555 | None:intergenic | 25.0% |
| ! | TATCCCACATTTCTTAATTT+AGG | + | chr3.1:31882173-31882192 | None:intergenic | 25.0% |
| ! | TATGCACTTTATGATAAGAA+TGG | - | chr3.1:31883668-31883687 | MS.gene46961:CDS | 25.0% |
| ! | TTTGCAATATCCTGTAATTA+GGG | + | chr3.1:31884894-31884913 | None:intergenic | 25.0% |
| !! | ACAAATGATTGTTAGGTTTT+GGG | - | chr3.1:31883795-31883814 | MS.gene46961:intron | 25.0% |
| !! | ACATATAATACCTTTTACGT+TGG | + | chr3.1:31883609-31883628 | None:intergenic | 25.0% |
| !! | AGGCTTTTGTAAAGTAAAAA+GGG | + | chr3.1:31881928-31881947 | None:intergenic | 25.0% |
| !! | CAATTTTGTAATCCCTTTTT+AGG | + | chr3.1:31881555-31881574 | None:intergenic | 25.0% |
| !! | GTATTTTCTAATGTTCTTCA+TGG | + | chr3.1:31884822-31884841 | None:intergenic | 25.0% |
| !! | GTTGATTTCTTTAAATTACC+TGG | + | chr3.1:31884301-31884320 | None:intergenic | 25.0% |
| !! | TAATTAAAATGGTGGAAATC+TGG | - | chr3.1:31882314-31882333 | MS.gene46961:CDS | 25.0% |
| !! | TACAAATGATTGTTAGGTTT+TGG | - | chr3.1:31883794-31883813 | MS.gene46961:intron | 25.0% |
| !!! | AACCTTTGAAATTTTGTACT+TGG | - | chr3.1:31883988-31884007 | MS.gene46961:CDS | 25.0% |
| !!! | ACTTGTATGAAAACTAGTTT+TGG | - | chr3.1:31882103-31882122 | MS.gene46961:CDS | 25.0% |
| !!! | AGACATTTTTTCAATGTCTT+TGG | + | chr3.1:31885491-31885510 | None:intergenic | 25.0% |
| !!! | ATTTGAAACTATTTTACTGG+AGG | - | chr3.1:31883733-31883752 | MS.gene46961:intron | 25.0% |
| !!! | GTCTTTCAATTGTTTTTGAT+AGG | - | chr3.1:31884070-31884089 | MS.gene46961:intron | 25.0% |
| !!! | TAGACAATTCTTTTTCAATG+GGG | - | chr3.1:31882043-31882062 | MS.gene46961:CDS | 25.0% |
| !!! | TATGAAAACTAGTTTTGGAA+TGG | - | chr3.1:31882108-31882127 | MS.gene46961:CDS | 25.0% |
| AAACATCAGAAGAGATGATT+TGG | + | chr3.1:31883943-31883962 | None:intergenic | 30.0% | |
| AAAGTTGTTCGGAGATATAA+TGG | - | chr3.1:31885154-31885173 | MS.gene46961:intron | 30.0% | |
| AAATCAGTATTATGGCTGTA+GGG | - | chr3.1:31884753-31884772 | MS.gene46961:intron | 30.0% | |
| ACCTTGCAATTAAATCCAAA+AGG | + | chr3.1:31881667-31881686 | None:intergenic | 30.0% | |
| AGAATCAAACAAATCCAGAT+GGG | - | chr3.1:31884669-31884688 | MS.gene46961:intron | 30.0% | |
| AGCTCCAAGTTTCAAATATT+AGG | + | chr3.1:31883061-31883080 | None:intergenic | 30.0% | |
| AGTAAAAATAGAGTGGTTAC+CGG | + | chr3.1:31885577-31885596 | None:intergenic | 30.0% | |
| ATACAATTTCACTGAATGGT+TGG | - | chr3.1:31884273-31884292 | MS.gene46961:intron | 30.0% | |
| ATACATACCTTTCCAAATCA+TGG | + | chr3.1:31883469-31883488 | None:intergenic | 30.0% | |
| ATCAGCAAGTTATCTAATCT+TGG | + | chr3.1:31881767-31881786 | None:intergenic | 30.0% | |
| ATGCTGTGAAATCAGTATTA+TGG | - | chr3.1:31884745-31884764 | MS.gene46961:intron | 30.0% | |
| CATATAGCTATGATCAAGTA+GGG | - | chr3.1:31885986-31886005 | MS.gene46961:intron | 30.0% | |
| CGTTGGATAAAACTAGAAAA+AGG | + | chr3.1:31883592-31883611 | None:intergenic | 30.0% | |
| GAAAACATTTATTGCTGATG+CGG | - | chr3.1:31885201-31885220 | MS.gene46961:intron | 30.0% | |
| GATTGCAATTATCCGTTAAT+GGG | - | chr3.1:31881298-31881317 | MS.gene46961:CDS | 30.0% | |
| GCTCCAAGTTTCAAATATTA+GGG | + | chr3.1:31883060-31883079 | None:intergenic | 30.0% | |
| GGAGTTCTTGACAAAAAAAA+TGG | + | chr3.1:31881646-31881665 | None:intergenic | 30.0% | |
| GTTTGCAATATCCTGTAATT+AGG | + | chr3.1:31884895-31884914 | None:intergenic | 30.0% | |
| TAAAAGATTCCTTTCATGAC+AGG | - | chr3.1:31884699-31884718 | MS.gene46961:intron | 30.0% | |
| TACAATTTCACTGAATGGTT+GGG | - | chr3.1:31884274-31884293 | MS.gene46961:intron | 30.0% | |
| TACTAAGAATTTGATGTGAG+TGG | - | chr3.1:31882345-31882364 | MS.gene46961:CDS | 30.0% | |
| TAGAATCAAACAAATCCAGA+TGG | - | chr3.1:31884668-31884687 | MS.gene46961:intron | 30.0% | |
| TATTGAAATATAGAGAGACC+AGG | - | chr3.1:31884558-31884577 | MS.gene46961:intron | 30.0% | |
| TCATATAGCTATGATCAAGT+AGG | - | chr3.1:31885985-31886004 | MS.gene46961:intron | 30.0% | |
| TCCAGAATTAAGGTTATTAC+TGG | - | chr3.1:31884095-31884114 | MS.gene46961:intron | 30.0% | |
| TCCTGTCAAAATATATTCAG+AGG | + | chr3.1:31884956-31884975 | None:intergenic | 30.0% | |
| TCTGATACAATTTCACTGAA+TGG | - | chr3.1:31884269-31884288 | MS.gene46961:intron | 30.0% | |
| TGATTGCAATTATCCGTTAA+TGG | - | chr3.1:31881297-31881316 | MS.gene46961:CDS | 30.0% | |
| TGGATTTAATTGCAAGGTAA+TGG | - | chr3.1:31881669-31881688 | MS.gene46961:intron | 30.0% | |
| TTACATGCATAACAACACAA+TGG | + | chr3.1:31884602-31884621 | None:intergenic | 30.0% | |
| TTACTTTACAAAAGCCTCTA+GGG | - | chr3.1:31881931-31881950 | MS.gene46961:CDS | 30.0% | |
| TTGATAGGAATCCAGAATTA+AGG | - | chr3.1:31884085-31884104 | MS.gene46961:intron | 30.0% | |
| TTTACTTTACAAAAGCCTCT+AGG | - | chr3.1:31881930-31881949 | MS.gene46961:CDS | 30.0% | |
| ! | AACTTTTGTTACCAATTCCT+GGG | + | chr3.1:31883705-31883724 | None:intergenic | 30.0% |
| ! | AATATGCATTTTCAGAGTCA+AGG | - | chr3.1:31883106-31883125 | MS.gene46961:CDS | 30.0% |
| ! | ATATGCATTTTCAGAGTCAA+GGG | - | chr3.1:31883107-31883126 | MS.gene46961:CDS | 30.0% |
| ! | CAAATGATTGTTAGGTTTTG+GGG | - | chr3.1:31883796-31883815 | MS.gene46961:intron | 30.0% |
| ! | GAGGCTTTTGTAAAGTAAAA+AGG | + | chr3.1:31881929-31881948 | None:intergenic | 30.0% |
| ! | GATACTTGCTAGTTTAGATT+TGG | - | chr3.1:31882484-31882503 | MS.gene46961:intron | 30.0% |
| ! | GTCGTTTCTTATTTAGTAAC+TGG | - | chr3.1:31882871-31882890 | MS.gene46961:intron | 30.0% |
| ! | GTTCCCTAATATTTGAAACT+TGG | - | chr3.1:31883054-31883073 | MS.gene46961:intron | 30.0% |
| ! | TCCTTTTGGATTTAATTGCA+AGG | - | chr3.1:31881663-31881682 | MS.gene46961:intron | 30.0% |
| ! | TTTTTGTCAAGAACTCCTTT+TGG | - | chr3.1:31881649-31881668 | MS.gene46961:intron | 30.0% |
| !! | ATACATATTTTTGTAGCCTG+TGG | - | chr3.1:31882896-31882915 | MS.gene46961:intron | 30.0% |
| !! | CTAGTTTTCATACAAGTTGA+AGG | + | chr3.1:31882100-31882119 | None:intergenic | 30.0% |
| !! | GTGTTGACTGATCTATAAAT+AGG | - | chr3.1:31884524-31884543 | MS.gene46961:intron | 30.0% |
| !!! | ACCTCTGAATATATTTTGAC+AGG | - | chr3.1:31884952-31884971 | MS.gene46961:intron | 30.0% |
| !!! | CTAGGTCAACTTAGTTTTAA+AGG | + | chr3.1:31884866-31884885 | None:intergenic | 30.0% |
| !!! | CTAGTTTTATCCAACGTAAA+AGG | - | chr3.1:31883596-31883615 | MS.gene46961:intron | 30.0% |
| !!! | GAACACTTTTTTCCTGTTTA+AGG | - | chr3.1:31883345-31883364 | MS.gene46961:intron | 30.0% |
| !!! | TGTGATTTTTTTTCCTGCTT+TGG | - | chr3.1:31882407-31882426 | MS.gene46961:intron | 30.0% |
| AAACCAGAAATGTAGTGCAA+AGG | + | chr3.1:31883859-31883878 | None:intergenic | 35.0% | |
| AAATATAGAGAGACCAGGTT+AGG | - | chr3.1:31884563-31884582 | MS.gene46961:intron | 35.0% | |
| AATATAGAGAGACCAGGTTA+GGG | - | chr3.1:31884564-31884583 | MS.gene46961:intron | 35.0% | |
| ACAAAATGACCTGTCATGAA+AGG | + | chr3.1:31884711-31884730 | None:intergenic | 35.0% | |
| ACGAGTAATCAGTGTGAATT+CGG | + | chr3.1:31883206-31883225 | None:intergenic | 35.0% | |
| ACTCCTAAGAACTCTACATT+AGG | + | chr3.1:31885373-31885392 | None:intergenic | 35.0% | |
| AGAGGATATCATTTGAACCA+AGG | - | chr3.1:31885260-31885279 | MS.gene46961:intron | 35.0% | |
| AGATTATAGTGAACTGAGCA+GGG | + | chr3.1:31885705-31885724 | None:intergenic | 35.0% | |
| ATATGGTTCCATAGAACTAG+TGG | + | chr3.1:31885735-31885754 | None:intergenic | 35.0% | |
| ATGTAGGATATGGCAGTTAT+TGG | + | chr3.1:31881520-31881539 | None:intergenic | 35.0% | |
| ATTGAGGTCAAATACCTGAA+AGG | + | chr3.1:31881177-31881196 | None:intergenic | 35.0% | |
| ATTTCATCATTGAGGCAATC+AGG | + | chr3.1:31882988-31883007 | None:intergenic | 35.0% | |
| CAATTATCCGTTAATGGGAT+TGG | - | chr3.1:31881303-31881322 | MS.gene46961:CDS | 35.0% | |
| CAGTTCACTATAATCTACAC+AGG | - | chr3.1:31885709-31885728 | MS.gene46961:intron | 35.0% | |
| CATGATTATCGGTCATAGAA+AGG | + | chr3.1:31884499-31884518 | None:intergenic | 35.0% | |
| CCGCTTAAAGAAAACAATCA+CGG | + | chr3.1:31884144-31884163 | None:intergenic | 35.0% | |
| CCTGTAATTAGGGTAAAACT+AGG | + | chr3.1:31884884-31884903 | None:intergenic | 35.0% | |
| CTCATAGCATACACAGTAAA+GGG | + | chr3.1:31885859-31885878 | None:intergenic | 35.0% | |
| CTTATCATAAAGTGCATAGC+TGG | + | chr3.1:31883666-31883685 | None:intergenic | 35.0% | |
| GAAATCAGTATTATGGCTGT+AGG | - | chr3.1:31884752-31884771 | MS.gene46961:intron | 35.0% | |
| GCAAACACATGAATTACTGT+CGG | + | chr3.1:31882650-31882669 | None:intergenic | 35.0% | |
| GCCAGTAATAACCTTAATTC+TGG | + | chr3.1:31884099-31884118 | None:intergenic | 35.0% | |
| GTAGAGAACATATAAACCAC+AGG | + | chr3.1:31882915-31882934 | None:intergenic | 35.0% | |
| GTAGTTGCAGATACATCTTA+TGG | - | chr3.1:31885391-31885410 | MS.gene46961:intron | 35.0% | |
| GTTATAAATACCCTAGCCAA+GGG | - | chr3.1:31885025-31885044 | MS.gene46961:intron | 35.0% | |
| GTTATCTAATCTTGGAGCAT+TGG | + | chr3.1:31881759-31881778 | None:intergenic | 35.0% | |
| TAAAGTGCATAGCTGGAATA+AGG | + | chr3.1:31883659-31883678 | None:intergenic | 35.0% | |
| TAAATTAAGGACGAGAAGGT+GGG | + | chr3.1:31884366-31884385 | None:intergenic | 35.0% | |
| TACATACGAGATATCTGAAG+TGG | + | chr3.1:31886225-31886244 | None:intergenic | 35.0% | |
| TAGATTATAGTGAACTGAGC+AGG | + | chr3.1:31885706-31885725 | None:intergenic | 35.0% | |
| TCAGAGTCACAAAAGTTGTT+CGG | - | chr3.1:31885143-31885162 | MS.gene46961:intron | 35.0% | |
| TCAGTGGTATTTATGCAGAA+TGG | - | chr3.1:31884226-31884245 | MS.gene46961:intron | 35.0% | |
| TCCACTTCATTTCATCATTG+AGG | + | chr3.1:31882996-31883015 | None:intergenic | 35.0% | |
| TGCATGATTCCTAAAAAGGA+GGG | + | chr3.1:31882834-31882853 | None:intergenic | 35.0% | |
| TGGTATTTATGCAGAATGGA+GGG | - | chr3.1:31884230-31884249 | MS.gene46961:intron | 35.0% | |
| TGTGTAAATTAAGGACGAGA+AGG | + | chr3.1:31884370-31884389 | None:intergenic | 35.0% | |
| TGTTATAAATACCCTAGCCA+AGG | - | chr3.1:31885024-31885043 | MS.gene46961:intron | 35.0% | |
| TGTTATCTACTATGCAAGTG+TGG | + | chr3.1:31883525-31883544 | None:intergenic | 35.0% | |
| TTGGTGTACTTAAAGCAAAG+AGG | - | chr3.1:31885242-31885261 | MS.gene46961:intron | 35.0% | |
| TTTAGGCCTCACATTTCTTT+GGG | - | chr3.1:31885829-31885848 | MS.gene46961:intron | 35.0% | |
| TTTCTAATGTTCTTCATGGC+AGG | + | chr3.1:31884818-31884837 | None:intergenic | 35.0% | |
| ! | AAATGTTTTCCCACTTTCCA+CGG | + | chr3.1:31885191-31885210 | None:intergenic | 35.0% |
| ! | AATACCACTGAAGTACCTTA+TGG | + | chr3.1:31884217-31884236 | None:intergenic | 35.0% |
| ! | ACATACGAGATATCTGAAGT+GGG | + | chr3.1:31886224-31886243 | None:intergenic | 35.0% |
| ! | ACTTTTGTTACCAATTCCTG+GGG | + | chr3.1:31883704-31883723 | None:intergenic | 35.0% |
| ! | ATACCACTGAAGTACCTTAT+GGG | + | chr3.1:31884216-31884235 | None:intergenic | 35.0% |
| ! | ATTCACACTGATTACTCGTT+TGG | - | chr3.1:31883207-31883226 | MS.gene46961:intron | 35.0% |
| ! | CAACTTTTGTTACCAATTCC+TGG | + | chr3.1:31883706-31883725 | None:intergenic | 35.0% |
| ! | CAGGAATTGGTAACAAAAGT+TGG | - | chr3.1:31883704-31883723 | MS.gene46961:intron | 35.0% |
| ! | CCGTGATTGTTTTCTTTAAG+CGG | - | chr3.1:31884141-31884160 | MS.gene46961:CDS | 35.0% |
| ! | TATACGACCATGATTTGGAA+AGG | - | chr3.1:31883459-31883478 | MS.gene46961:intron | 35.0% |
| ! | TTGCTTTAAGTACACCAAGA+GGG | + | chr3.1:31885240-31885259 | None:intergenic | 35.0% |
| ! | TTGGCTAGGGTATTTATAAC+AGG | + | chr3.1:31885025-31885044 | None:intergenic | 35.0% |
| ! | TTTCAGTTTTTAATCGCGCT+AGG | - | chr3.1:31885599-31885618 | MS.gene46961:intron | 35.0% |
| ! | TTTGCTTTAAGTACACCAAG+AGG | + | chr3.1:31885241-31885260 | None:intergenic | 35.0% |
| !! | ACTTCATGACTTGCATTTTG+GGG | + | chr3.1:31882672-31882691 | None:intergenic | 35.0% |
| !! | ACTTTTGTGACTCTGAAAAG+AGG | + | chr3.1:31885139-31885158 | None:intergenic | 35.0% |
| !! | CACTTCATGACTTGCATTTT+GGG | + | chr3.1:31882673-31882692 | None:intergenic | 35.0% |
| !! | TACATAAGAGCACTTTCTCT+TGG | + | chr3.1:31881968-31881987 | None:intergenic | 35.0% |
| !! | TTTTCCTGTTTAAGGTTGCA+TGG | - | chr3.1:31883353-31883372 | MS.gene46961:intron | 35.0% |
| !!! | CCTAGTTTTACCCTAATTAC+AGG | - | chr3.1:31884881-31884900 | MS.gene46961:intron | 35.0% |
| AAACTAGCAAGTATCACCCA+GGG | + | chr3.1:31882479-31882498 | None:intergenic | 40.0% | |
| AAATTAAGGACGAGAAGGTG+GGG | + | chr3.1:31884365-31884384 | None:intergenic | 40.0% | |
| AACTCCATGCAACCTTAAAC+AGG | + | chr3.1:31883360-31883379 | None:intergenic | 40.0% | |
| AAGGCATGTAAACAAGGACA+GGG | + | chr3.1:31885456-31885475 | None:intergenic | 40.0% | |
| AATATCAAGACCCTTGGCTA+GGG | + | chr3.1:31885038-31885057 | None:intergenic | 40.0% | |
| AATTGAAAGACCACGCTGTA+TGG | + | chr3.1:31884061-31884080 | None:intergenic | 40.0% | |
| ACCAGGTTAGGGGATAAAAA+TGG | - | chr3.1:31884575-31884594 | MS.gene46961:intron | 40.0% | |
| ACTATATCTACCTGTGTCCT+AGG | + | chr3.1:31885063-31885082 | None:intergenic | 40.0% | |
| ACTTCAAGATGCTTCCTTTC+AGG | - | chr3.1:31881160-31881179 | MS.gene46961:CDS | 40.0% | |
| AGATCTCGATTAGAAGATCG+AGG | + | chr3.1:31881345-31881364 | None:intergenic | 40.0% | |
| AGATTCAGTACCTTGTGTCT+CGG | - | chr3.1:31885935-31885954 | MS.gene46961:intron | 40.0% | |
| AGGTTGTTCTCTTAGAGTCT+AGG | - | chr3.1:31883166-31883185 | MS.gene46961:intron | 40.0% | |
| ATATAGAGAGACCAGGTTAG+GGG | - | chr3.1:31884565-31884584 | MS.gene46961:intron | 40.0% | |
| ATGCCTTTGCACTACATTTC+TGG | - | chr3.1:31883853-31883872 | MS.gene46961:intron | 40.0% | |
| ATGTGGGATATGGCAGTTAT+TGG | - | chr3.1:31882183-31882202 | MS.gene46961:CDS | 40.0% | |
| CAAACAAATCCAGATGGGAA+GGG | - | chr3.1:31884674-31884693 | MS.gene46961:intron | 40.0% | |
| CAAAGAAATGTGAGGCCTAA+AGG | + | chr3.1:31885830-31885849 | None:intergenic | 40.0% | |
| CATTCAGCCAATCCCATTAA+CGG | + | chr3.1:31881313-31881332 | None:intergenic | 40.0% | |
| CCAAAATGCAAGTCATGAAG+TGG | - | chr3.1:31882671-31882690 | MS.gene46961:intron | 40.0% | |
| CCTCATAGCATACACAGTAA+AGG | + | chr3.1:31885860-31885879 | None:intergenic | 40.0% | |
| CCTTTACTGTGTATGCTATG+AGG | - | chr3.1:31885857-31885876 | MS.gene46961:intron | 40.0% | |
| CGAAGAACAGGTTATCTACT+GGG | + | chr3.1:31886044-31886063 | None:intergenic | 40.0% | |
| CTACTTCCTTAATCTCCACA+AGG | - | chr3.1:31885420-31885439 | MS.gene46961:intron | 40.0% | |
| CTCAGACATTCAAAACAAGG+AGG | + | chr3.1:31881621-31881640 | None:intergenic | 40.0% | |
| CTTTAGGCCTCACATTTCTT+TGG | - | chr3.1:31885828-31885847 | MS.gene46961:intron | 40.0% | |
| GACATTCAAAACAAGGAGGT+CGG | + | chr3.1:31881617-31881636 | None:intergenic | 40.0% | |
| GAGCTCAGACATTCAAAACA+AGG | + | chr3.1:31881624-31881643 | None:intergenic | 40.0% | |
| GATCTCGATTAGAAGATCGA+GGG | + | chr3.1:31881344-31881363 | None:intergenic | 40.0% | |
| GCCTCAATGATGAAATGAAG+TGG | - | chr3.1:31882992-31883011 | MS.gene46961:intron | 40.0% | |
| GCTGTGCATGATTCCTAAAA+AGG | + | chr3.1:31882838-31882857 | None:intergenic | 40.0% | |
| GGCTCGGATATAAATTCACT+GGG | - | chr3.1:31885961-31885980 | MS.gene46961:intron | 40.0% | |
| GGTTGTTCTCTTAGAGTCTA+GGG | - | chr3.1:31883167-31883186 | MS.gene46961:intron | 40.0% | |
| GTAAATTAAGGACGAGAAGG+TGG | + | chr3.1:31884367-31884386 | None:intergenic | 40.0% | |
| GTGCATGATTCCTAAAAAGG+AGG | + | chr3.1:31882835-31882854 | None:intergenic | 40.0% | |
| GTGGTATTTATGCAGAATGG+AGG | - | chr3.1:31884229-31884248 | MS.gene46961:intron | 40.0% | |
| TAAAAGTGACCGTGGAAAGT+GGG | - | chr3.1:31885179-31885198 | MS.gene46961:intron | 40.0% | |
| TAAACTAGCAAGTATCACCC+AGG | + | chr3.1:31882480-31882499 | None:intergenic | 40.0% | |
| TAATGGAGTAAAAGTGACCG+TGG | - | chr3.1:31885171-31885190 | MS.gene46961:intron | 40.0% | |
| TAGATAACCTGTTCTTCGCA+GGG | - | chr3.1:31886046-31886065 | MS.gene46961:intron | 40.0% | |
| TCAAACAAATCCAGATGGGA+AGG | - | chr3.1:31884673-31884692 | MS.gene46961:intron | 40.0% | |
| TCCTAAAAAGGAGGGAGATA+GGG | + | chr3.1:31882826-31882845 | None:intergenic | 40.0% | |
| TGAAAACCTCACCTACCTTT+AGG | - | chr3.1:31885812-31885831 | MS.gene46961:intron | 40.0% | |
| TGGCCTAATGTAGAGTTCTT+AGG | - | chr3.1:31885367-31885386 | MS.gene46961:intron | 40.0% | |
| TGTGCTATACGACCATGATT+TGG | - | chr3.1:31883454-31883473 | MS.gene46961:intron | 40.0% | |
| TTACTGTGGAAATGCATAGC+AGG | + | chr3.1:31883908-31883927 | None:intergenic | 40.0% | |
| TTAGAGTCTAGGGAAAGACT+TGG | - | chr3.1:31883177-31883196 | MS.gene46961:intron | 40.0% | |
| TTCCTAAAAAGGAGGGAGAT+AGG | + | chr3.1:31882827-31882846 | None:intergenic | 40.0% | |
| ! | AAGGCATCACTATAAGGTAG+AGG | + | chr3.1:31883840-31883859 | None:intergenic | 40.0% |
| ! | TATCTGAAGTGGGATAGTCA+AGG | + | chr3.1:31886214-31886233 | None:intergenic | 40.0% |
| ! | TCCTTGTTTACATGCCTTCT+GGG | - | chr3.1:31885458-31885477 | MS.gene46961:intron | 40.0% |
| !! | AAGAGCACTTTCTCTTGGTT+TGG | + | chr3.1:31881963-31881982 | None:intergenic | 40.0% |
| !! | AGTGCAAAGGCATCACTATA+AGG | + | chr3.1:31883846-31883865 | None:intergenic | 40.0% |
| !! | CCACTTCATGACTTGCATTT+TGG | + | chr3.1:31882674-31882693 | None:intergenic | 40.0% |
| !! | CTCTCTTTGGTGTTACATAC+AGG | - | chr3.1:31884402-31884421 | MS.gene46961:intron | 40.0% |
| !! | TCCATTTTTATCCCCTAACC+TGG | + | chr3.1:31884579-31884598 | None:intergenic | 40.0% |
| AAATAGAGTGGTTACCGGTG+AGG | + | chr3.1:31885572-31885591 | None:intergenic | 45.0% | |
| AACCACATGAACTGTACGAG+AGG | - | chr3.1:31886010-31886029 | MS.gene46961:intron | 45.0% | |
| AAGGGTCTTGATATTCGCCT+AGG | - | chr3.1:31885043-31885062 | MS.gene46961:intron | 45.0% | |
| AAGGTTGCATGGAGTTTGCA+AGG | - | chr3.1:31883364-31883383 | MS.gene46961:intron | 45.0% | |
| AATCCACTTGCTTCCGTGAT+TGG | - | chr3.1:31883389-31883408 | MS.gene46961:intron | 45.0% | |
| ACAGTAGATTGAGCCAAAGC+AGG | + | chr3.1:31882423-31882442 | None:intergenic | 45.0% | |
| AGATAACCTGTTCTTCGCAG+GGG | - | chr3.1:31886047-31886066 | MS.gene46961:intron | 45.0% | |
| ATAATTCGGGAAGAGTCCCT+GGG | - | chr3.1:31882460-31882479 | MS.gene46961:intron | 45.0% | |
| ATCCACTTGCTTCCGTGATT+GGG | - | chr3.1:31883390-31883409 | MS.gene46961:intron | 45.0% | |
| ATCCCCACTAGTACGGTAAA+GGG | + | chr3.1:31883429-31883448 | None:intergenic | 45.0% | |
| ATGTTGAAGACTCATGCACC+TGG | + | chr3.1:31884472-31884491 | None:intergenic | 45.0% | |
| ATTTATGCAGAATGGAGGGC+TGG | - | chr3.1:31884234-31884253 | MS.gene46961:intron | 45.0% | |
| CAGAGTTATCCCCACTAGTA+CGG | + | chr3.1:31883436-31883455 | None:intergenic | 45.0% | |
| CCTAAAAAGGAGGGAGATAG+GGG | + | chr3.1:31882825-31882844 | None:intergenic | 45.0% | |
| CTAAAAAGGAGGGAGATAGG+GGG | + | chr3.1:31882824-31882843 | None:intergenic | 45.0% | |
| GAAATGTGAGGCCTAAAGGT+AGG | + | chr3.1:31885826-31885845 | None:intergenic | 45.0% | |
| GAAGATATGTCCATACAGCG+TGG | - | chr3.1:31884048-31884067 | MS.gene46961:intron | 45.0% | |
| GAATATCAAGACCCTTGGCT+AGG | + | chr3.1:31885039-31885058 | None:intergenic | 45.0% | |
| GAATCAAGTTCCCCAGGAAT+TGG | - | chr3.1:31883691-31883710 | MS.gene46961:CDS | 45.0% | |
| GCAACAAGTATGAGCTATCC+AGG | - | chr3.1:31886072-31886091 | MS.gene46961:intron | 45.0% | |
| GCGAAGAACAGGTTATCTAC+TGG | + | chr3.1:31886045-31886064 | None:intergenic | 45.0% | |
| GGGAAAGAGAGAGAGACATT+AGG | + | chr3.1:31881585-31881604 | None:intergenic | 45.0% | |
| GGGCTCGGATATAAATTCAC+TGG | - | chr3.1:31885960-31885979 | MS.gene46961:intron | 45.0% | |
| GTAAAAGTGACCGTGGAAAG+TGG | - | chr3.1:31885178-31885197 | MS.gene46961:intron | 45.0% | |
| GTAGAGGAATCCAACTACGT+TGG | + | chr3.1:31883824-31883843 | None:intergenic | 45.0% | |
| GTAGATAACCTGTTCTTCGC+AGG | - | chr3.1:31886045-31886064 | MS.gene46961:intron | 45.0% | |
| TAAAAAGGAGGGAGATAGGG+GGG | + | chr3.1:31882823-31882842 | None:intergenic | 45.0% | |
| TACCCCTTTACCGTACTAGT+GGG | - | chr3.1:31883423-31883442 | MS.gene46961:intron | 45.0% | |
| TAGGCGAATATCAAGACCCT+TGG | + | chr3.1:31885044-31885063 | None:intergenic | 45.0% | |
| TATAATTCGGGAAGAGTCCC+TGG | - | chr3.1:31882459-31882478 | MS.gene46961:intron | 45.0% | |
| TATCCCCACTAGTACGGTAA+AGG | + | chr3.1:31883430-31883449 | None:intergenic | 45.0% | |
| TCATGGCAGGTCTATGCAAA+GGG | + | chr3.1:31884805-31884824 | None:intergenic | 45.0% | |
| TGTAAAGTCGTCTCATAGCC+AGG | - | chr3.1:31884451-31884470 | MS.gene46961:intron | 45.0% | |
| TTACCCCTTTACCGTACTAG+TGG | - | chr3.1:31883422-31883441 | MS.gene46961:intron | 45.0% | |
| TTCATGGCAGGTCTATGCAA+AGG | + | chr3.1:31884806-31884825 | None:intergenic | 45.0% | |
| TTGATATTCGCCTAGGACAC+AGG | - | chr3.1:31885050-31885069 | MS.gene46961:intron | 45.0% | |
| TTGTTTACATGCCTTCTGGG+CGG | - | chr3.1:31885461-31885480 | MS.gene46961:intron | 45.0% | |
| ! | GAAGGCATGTAAACAAGGAC+AGG | + | chr3.1:31885457-31885476 | None:intergenic | 45.0% |
| ! | GATTTGTTTCAGCCGGTGAT+GGG | - | chr3.1:31886177-31886196 | MS.gene46961:intron | 45.0% |
| ! | GTCCTTGTTTACATGCCTTC+TGG | - | chr3.1:31885457-31885476 | MS.gene46961:intron | 45.0% |
| ! | TCTTTTACACCCTTCCCATC+TGG | + | chr3.1:31884686-31884705 | None:intergenic | 45.0% |
| ! | TTGCCCATAAGGTACTTCAG+TGG | - | chr3.1:31884210-31884229 | MS.gene46961:intron | 45.0% |
| !! | CACAAGGTACTGAATCTGCA+TGG | + | chr3.1:31885932-31885951 | None:intergenic | 45.0% |
| !! | TACACAGGCCACTAGTTCTA+TGG | - | chr3.1:31885724-31885743 | MS.gene46961:intron | 45.0% |
| !! | TGGTTTGGTTTAGACCCTAG+AGG | + | chr3.1:31881948-31881967 | None:intergenic | 45.0% |
| !! | TTTGGCTTTCCTGTTGACCT+GGG | - | chr3.1:31883225-31883244 | MS.gene46961:intron | 45.0% |
| !!! | TTTTATTTTTTTTAATTGTT+TGG | - | chr3.1:31883141-31883160 | MS.gene46961:CDS | 5.0% |
| AACTGAGCAGGGTGAACTAG+AGG | + | chr3.1:31885694-31885713 | None:intergenic | 50.0% | |
| AAGCTGCCATCGCTGAACTT+GGG | - | chr3.1:31885299-31885318 | MS.gene46961:intron | 50.0% | |
| AAGGAGGTCGGAGAAGGTTA+GGG | + | chr3.1:31881605-31881624 | None:intergenic | 50.0% | |
| AATGCACCATGGACAGATCC+TGG | + | chr3.1:31886093-31886112 | None:intergenic | 50.0% | |
| ACCCCTTTACCGTACTAGTG+GGG | - | chr3.1:31883424-31883443 | MS.gene46961:intron | 50.0% | |
| AGCCTCTCGTACAGTTCATG+TGG | + | chr3.1:31886015-31886034 | None:intergenic | 50.0% | |
| AGCTATCCAGGATCTGTCCA+TGG | - | chr3.1:31886084-31886103 | MS.gene46961:intron | 50.0% | |
| AGCTTTACCATGATGCTCCC+AGG | + | chr3.1:31883245-31883264 | None:intergenic | 50.0% | |
| ATCTTCAGCCGCCATCATTC+CGG | + | chr3.1:31886121-31886140 | None:intergenic | 50.0% | |
| ATTCTCCACCGGAATGATGG+CGG | - | chr3.1:31886110-31886129 | MS.gene46961:intron | 50.0% | |
| CAAAACAAGGAGGTCGGAGA+AGG | + | chr3.1:31881611-31881630 | None:intergenic | 50.0% | |
| CCTTCCTAATGCTTCCTCAC+CGG | - | chr3.1:31885555-31885574 | MS.gene46961:intron | 50.0% | |
| CTGAAGTGGGATAGTCAAGG+AGG | + | chr3.1:31886211-31886230 | None:intergenic | 50.0% | |
| GAATGGGAATCAAGTTCCCC+AGG | - | chr3.1:31883685-31883704 | MS.gene46961:CDS | 50.0% | |
| GAGTCTAGGGAAAGACTTGG+TGG | - | chr3.1:31883180-31883199 | MS.gene46961:intron | 50.0% | |
| GCTATTGTTGCTGTCCCTCT+TGG | - | chr3.1:31885223-31885242 | MS.gene46961:intron | 50.0% | |
| GGTCAGCCCAAAGAAATGTG+AGG | + | chr3.1:31885838-31885857 | None:intergenic | 50.0% | |
| TCAGTACCTTGTGTCTCGGT+GGG | - | chr3.1:31885939-31885958 | MS.gene46961:intron | 50.0% | |
| TCCCCACTAGTACGGTAAAG+GGG | + | chr3.1:31883428-31883447 | None:intergenic | 50.0% | |
| TGATTTCCACCCTTGACTGC+AGG | - | chr3.1:31884177-31884196 | MS.gene46961:CDS | 50.0% | |
| TGCATTCTCCACCGGAATGA+TGG | - | chr3.1:31886107-31886126 | MS.gene46961:intron | 50.0% | |
| TTCACTGAATGGTTGGGACC+AGG | - | chr3.1:31884280-31884299 | MS.gene46961:intron | 50.0% | |
| TTCAGTACCTTGTGTCTCGG+TGG | - | chr3.1:31885938-31885957 | MS.gene46961:intron | 50.0% | |
| ! | CCCCTATCTCCCTCCTTTTT+AGG | - | chr3.1:31882822-31882841 | MS.gene46961:intron | 50.0% |
| ! | CGAGCTGGATTTGTTTCAGC+CGG | - | chr3.1:31886170-31886189 | MS.gene46961:intron | 50.0% |
| ! | GCCCAGAAGGCATGTAAACA+AGG | + | chr3.1:31885462-31885481 | None:intergenic | 50.0% |
| ! | GGATTTGTTTCAGCCGGTGA+TGG | - | chr3.1:31886176-31886195 | MS.gene46961:intron | 50.0% |
| ! | GTGCAGCCTTGTGGAGATTA+AGG | + | chr3.1:31885429-31885448 | None:intergenic | 50.0% |
| ! | TGGTCACGGTCTTATGGTCA+GGG | - | chr3.1:31884991-31885010 | MS.gene46961:intron | 50.0% |
| !! | GTTACCGGTGAGGAAGCATT+AGG | + | chr3.1:31885562-31885581 | None:intergenic | 50.0% |
| !! | GTTTGGCTTTCCTGTTGACC+TGG | - | chr3.1:31883224-31883243 | MS.gene46961:intron | 50.0% |
| !! | TGACAGGAAGTACTTCTCCC+TGG | - | chr3.1:31884968-31884987 | MS.gene46961:intron | 50.0% |
| !!! | TTTTGGGGTGCCAACGTAGT+TGG | - | chr3.1:31883811-31883830 | MS.gene46961:intron | 50.0% |
| ACCATAAGACCGTGACCACC+AGG | + | chr3.1:31884989-31885008 | None:intergenic | 55.0% | |
| AGATTGCAGGATGCGTGTGC+TGG | - | chr3.1:31886137-31886156 | MS.gene46961:intron | 55.0% | |
| AGCTGCCATCGCTGAACTTG+GGG | - | chr3.1:31885300-31885319 | MS.gene46961:intron | 55.0% | |
| ATGCGTGTGCTGGAGCGATA+TGG | - | chr3.1:31886147-31886166 | MS.gene46961:intron | 55.0% | |
| ATGGCAGCTTCCTTCCAGTC+TGG | + | chr3.1:31885289-31885308 | None:intergenic | 55.0% | |
| CAAGGAGGTCGGAGAAGGTT+AGG | + | chr3.1:31881606-31881625 | None:intergenic | 55.0% | |
| CACTTGCTTCCGTGATTGGG+AGG | - | chr3.1:31883393-31883412 | MS.gene46961:intron | 55.0% | |
| CAGTACCTTGTGTCTCGGTG+GGG | - | chr3.1:31885940-31885959 | MS.gene46961:intron | 55.0% | |
| CATGATGCTCCCAGGTCAAC+AGG | + | chr3.1:31883237-31883256 | None:intergenic | 55.0% | |
| CCATAAGACCGTGACCACCA+GGG | + | chr3.1:31884988-31885007 | None:intergenic | 55.0% | |
| CTCCCAATCACGGAAGCAAG+TGG | + | chr3.1:31883395-31883414 | None:intergenic | 55.0% | |
| GAAGCTGCCATCGCTGAACT+TGG | - | chr3.1:31885298-31885317 | MS.gene46961:intron | 55.0% | |
| GAGGCCATTTCTCCCATCAC+CGG | + | chr3.1:31886192-31886211 | None:intergenic | 55.0% | |
| GTACTTCTCCCTGGTGGTCA+CGG | - | chr3.1:31884977-31884996 | MS.gene46961:intron | 55.0% | |
| GTCCATGGTGCATTCTCCAC+CGG | - | chr3.1:31886099-31886118 | MS.gene46961:intron | 55.0% | |
| GTGAGGCCTAAAGGTAGGTG+AGG | + | chr3.1:31885821-31885840 | None:intergenic | 55.0% | |
| TAACCCCAGCCTCCCAATCA+CGG | + | chr3.1:31883405-31883424 | None:intergenic | 55.0% | |
| TCCAACCCCAAGTTCAGCGA+TGG | + | chr3.1:31885308-31885327 | None:intergenic | 55.0% | |
| TGGCAGCTTCCTTCCAGTCT+GGG | + | chr3.1:31885288-31885307 | None:intergenic | 55.0% | |
| TTCCACCCTTGACTGCAGGT+TGG | - | chr3.1:31884181-31884200 | MS.gene46961:CDS | 55.0% | |
| TTCCGGTGGAGAATGCACCA+TGG | + | chr3.1:31886104-31886123 | None:intergenic | 55.0% | |
| TTGAACCAAGGCTCCCAGAC+TGG | - | chr3.1:31885272-31885291 | MS.gene46961:intron | 55.0% | |
| TTGCTTCCCCTGCGAAGAAC+AGG | + | chr3.1:31886056-31886075 | None:intergenic | 55.0% | |
| ! | ACCCTTGACTGCAGGTTGGA+GGG | - | chr3.1:31884185-31884204 | MS.gene46961:CDS | 55.0% |
| ! | GGTCACGGTCTTATGGTCAG+GGG | - | chr3.1:31884992-31885011 | MS.gene46961:intron | 55.0% |
| ! | GTGGTCACGGTCTTATGGTC+AGG | - | chr3.1:31884990-31885009 | MS.gene46961:intron | 55.0% |
| !! | CAGGAAGTACTTCTCCCTGG+TGG | - | chr3.1:31884971-31884990 | MS.gene46961:intron | 55.0% |
| !! | CCGGTGAGGAAGCATTAGGA+AGG | + | chr3.1:31885558-31885577 | None:intergenic | 55.0% |
| !! | CTGTTGACCTGGGAGCATCA+TGG | - | chr3.1:31883235-31883254 | MS.gene46961:intron | 55.0% |
| !! | TCAGCCGGTGATGGGAGAAA+TGG | - | chr3.1:31886185-31886204 | MS.gene46961:intron | 55.0% |
| !! | TGATGGCGGCTGAAGATTGC+AGG | - | chr3.1:31886124-31886143 | MS.gene46961:intron | 55.0% |
| AAGGACGAGAAGGTGGGGCA+GGG | + | chr3.1:31884360-31884379 | None:intergenic | 60.0% | |
| ACCAAGGCTCCCAGACTGGA+AGG | - | chr3.1:31885276-31885295 | MS.gene46961:intron | 60.0% | |
| CCCCTCCAACCTGCAGTCAA+GGG | + | chr3.1:31884189-31884208 | None:intergenic | 60.0% | |
| CCCTGGTGGTCACGGTCTTA+TGG | - | chr3.1:31884985-31885004 | MS.gene46961:intron | 60.0% | |
| CTCCAACCTGCAGTCAAGGG+TGG | + | chr3.1:31884186-31884205 | None:intergenic | 60.0% | |
| CTTCCGTGATTGGGAGGCTG+GGG | - | chr3.1:31883399-31883418 | MS.gene46961:intron | 60.0% | |
| GCCATCGCTGAACTTGGGGT+TGG | - | chr3.1:31885304-31885323 | MS.gene46961:intron | 60.0% | |
| GCTTCCGTGATTGGGAGGCT+GGG | - | chr3.1:31883398-31883417 | MS.gene46961:intron | 60.0% | |
| GTTGGAGGGGCTTGCCCATA+AGG | - | chr3.1:31884199-31884218 | MS.gene46961:intron | 60.0% | |
| TAAGGACGAGAAGGTGGGGC+AGG | + | chr3.1:31884361-31884380 | None:intergenic | 60.0% | |
| TCCTTCCAGTCTGGGAGCCT+TGG | + | chr3.1:31885280-31885299 | None:intergenic | 60.0% | |
| TCTTTGGCAAGCCGCCCAGA+AGG | + | chr3.1:31885475-31885494 | None:intergenic | 60.0% | |
| TGCTTCCGTGATTGGGAGGC+TGG | - | chr3.1:31883397-31883416 | MS.gene46961:intron | 60.0% | |
| TTCAGCCGCCATCATTCCGG+TGG | + | chr3.1:31886118-31886137 | None:intergenic | 60.0% | |
| ! | CACCCTTGACTGCAGGTTGG+AGG | - | chr3.1:31884184-31884203 | MS.gene46961:CDS | 60.0% |
| ! | CCCTTGACTGCAGGTTGGAG+GGG | - | chr3.1:31884186-31884205 | MS.gene46961:CDS | 60.0% |
| AGGACGAGAAGGTGGGGCAG+GGG | + | chr3.1:31884359-31884378 | None:intergenic | 65.0% | |
| CAGGGTGACGTGCAGCCTTG+TGG | + | chr3.1:31885438-31885457 | None:intergenic | 65.0% | |
| CCTTGTGTCTCGGTGGGGCT+CGG | - | chr3.1:31885945-31885964 | MS.gene46961:intron | 65.0% | |
| GCCCCTCCAACCTGCAGTCA+AGG | + | chr3.1:31884190-31884209 | None:intergenic | 65.0% | |
| GCTGGAGCGATATGGCGAGC+TGG | - | chr3.1:31886155-31886174 | MS.gene46961:intron | 65.0% | |
| CCGAGCCCCACCGAGACACA+AGG | + | chr3.1:31885948-31885967 | None:intergenic | 70.0% | |
| GGACGAGAAGGTGGGGCAGG+GGG | + | chr3.1:31884358-31884377 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 31881134 | 31886245 | 31881134 | ID=MS.gene46961 |
| chr3.1 | mRNA | 31881134 | 31886245 | 31881134 | ID=MS.gene46961.t1;Parent=MS.gene46961 |
| chr3.1 | exon | 31886198 | 31886245 | 31886198 | ID=MS.gene46961.t1.exon1;Parent=MS.gene46961.t1 |
| chr3.1 | CDS | 31886198 | 31886245 | 31886198 | ID=cds.MS.gene46961.t1;Parent=MS.gene46961.t1 |
| chr3.1 | exon | 31884123 | 31884211 | 31884123 | ID=MS.gene46961.t1.exon2;Parent=MS.gene46961.t1 |
| chr3.1 | CDS | 31884123 | 31884211 | 31884123 | ID=cds.MS.gene46961.t1;Parent=MS.gene46961.t1 |
| chr3.1 | exon | 31883899 | 31884012 | 31883899 | ID=MS.gene46961.t1.exon3;Parent=MS.gene46961.t1 |
| chr3.1 | CDS | 31883899 | 31884012 | 31883899 | ID=cds.MS.gene46961.t1;Parent=MS.gene46961.t1 |
| chr3.1 | exon | 31883625 | 31883712 | 31883625 | ID=MS.gene46961.t1.exon4;Parent=MS.gene46961.t1 |
| chr3.1 | CDS | 31883625 | 31883712 | 31883625 | ID=cds.MS.gene46961.t1;Parent=MS.gene46961.t1 |
| chr3.1 | exon | 31883273 | 31883358 | 31883273 | ID=MS.gene46961.t1.exon5;Parent=MS.gene46961.t1 |
| chr3.1 | CDS | 31883273 | 31883358 | 31883273 | ID=cds.MS.gene46961.t1;Parent=MS.gene46961.t1 |
| chr3.1 | exon | 31883078 | 31883180 | 31883078 | ID=MS.gene46961.t1.exon6;Parent=MS.gene46961.t1 |
| chr3.1 | CDS | 31883078 | 31883180 | 31883078 | ID=cds.MS.gene46961.t1;Parent=MS.gene46961.t1 |
| chr3.1 | exon | 31882308 | 31882405 | 31882308 | ID=MS.gene46961.t1.exon7;Parent=MS.gene46961.t1 |
| chr3.1 | CDS | 31882308 | 31882405 | 31882308 | ID=cds.MS.gene46961.t1;Parent=MS.gene46961.t1 |
| chr3.1 | exon | 31881803 | 31882232 | 31881803 | ID=MS.gene46961.t1.exon8;Parent=MS.gene46961.t1 |
| chr3.1 | CDS | 31881803 | 31882232 | 31881803 | ID=cds.MS.gene46961.t1;Parent=MS.gene46961.t1 |
| chr3.1 | exon | 31881134 | 31881442 | 31881134 | ID=MS.gene46961.t1.exon9;Parent=MS.gene46961.t1 |
| chr3.1 | CDS | 31881134 | 31881442 | 31881134 | ID=cds.MS.gene46961.t1;Parent=MS.gene46961.t1 |
| Gene Sequence |
| Protein sequence |
