AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92026

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92026.t1 MTR_3g449620 98.678 454 6 0 1 454 37 490 0.0 924
MS.gene92026.t1 MTR_5g090300 84.116 447 69 1 8 454 44 488 0.0 784
MS.gene92026.t1 MTR_3g064370 63.596 456 164 1 1 454 37 492 0.0 613
MS.gene92026.t1 MTR_3g064370 61.928 415 156 1 42 454 1 415 0.0 545
MS.gene92026.t1 MTR_3g064370 67.139 353 116 0 1 353 37 389 6.83e-180 508
MS.gene92026.t1 MTR_3g113170 34.056 461 249 12 2 418 891 1340 8.61e-62 218
MS.gene92026.t1 MTR_3g113170 34.056 461 249 12 2 418 891 1340 1.00e-61 218
MS.gene92026.t1 MTR_1g023510 33.546 471 255 13 2 418 875 1341 2.13e-60 214
MS.gene92026.t1 MTR_5g087920 69.600 125 38 0 244 368 12 136 1.37e-54 179
MS.gene92026.t1 MTR_3g055090 31.377 443 258 13 1 418 168 589 1.37e-50 183
MS.gene92026.t1 MTR_6g084700 32.688 465 258 15 1 431 229 672 3.33e-50 182
MS.gene92026.t1 MTR_8g464450 30.734 436 256 14 8 418 178 592 1.33e-43 163
MS.gene92026.t1 MTR_1g050535 31.640 433 262 12 8 420 225 643 1.40e-43 164
MS.gene92026.t1 MTR_1g050535 31.640 433 262 12 8 420 225 643 1.58e-43 164
MS.gene92026.t1 MTR_3g033000 26.777 422 265 15 17 415 33 433 5.21e-27 113
MS.gene92026.t1 MTR_3g033000 26.455 378 234 15 17 371 33 389 1.18e-18 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92026.t1 AT2G43020 80.222 450 89 0 5 454 41 490 0.0 773
MS.gene92026.t1 AT3G59050 79.736 454 89 1 1 454 38 488 0.0 752
MS.gene92026.t1 AT1G65840 62.609 460 166 3 1 454 38 497 0.0 603
MS.gene92026.t1 AT4G16310 32.988 482 247 14 2 418 628 1098 2.03e-59 211
MS.gene92026.t1 AT4G16310 32.988 482 247 14 2 418 628 1098 2.03e-59 211
MS.gene92026.t1 AT4G16310 32.988 482 247 14 2 418 628 1098 2.03e-59 211
MS.gene92026.t1 AT4G16310 32.988 482 247 14 2 418 628 1098 2.03e-59 211
MS.gene92026.t1 AT4G16310 32.988 482 247 14 2 418 628 1098 2.03e-59 211
MS.gene92026.t1 AT3G10390 32.735 446 253 13 1 420 194 618 6.44e-48 176
MS.gene92026.t1 AT3G10390 32.511 446 254 13 1 420 246 670 1.61e-47 176
MS.gene92026.t1 AT3G10390 32.735 446 253 13 1 420 194 618 1.73e-47 175
MS.gene92026.t1 AT3G10390 32.511 446 254 13 1 420 246 670 1.90e-47 175
MS.gene92026.t1 AT3G13682 33.023 430 254 14 8 418 176 590 6.53e-47 172
MS.gene92026.t1 AT1G62830 32.747 455 277 14 1 437 275 718 1.09e-45 170
MS.gene92026.t1 AT5G13700 26.652 454 284 15 17 450 30 454 1.96e-34 134
MS.gene92026.t1 AT4G29720 24.259 540 274 16 1 429 14 529 1.10e-29 121

Find 154 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCTTGTTTACATGCCTTC+TGG 0.170041 3.2:-37314414 MS.gene92026:CDS
GCCAATAATAACCTTAATTC+TGG 0.198745 3.2:+37315777 None:intergenic
ACTTCAAGATGCTTCCTTTC+AGG 0.247076 3.2:-37317580 MS.gene92026:intron
TTGAAAGGAATCCAGAATTA+AGG 0.247084 3.2:-37315788 MS.gene92026:intron
GTCATTGGTGGTGGCATGGC+TGG 0.253200 3.2:-37317621 None:intergenic
TGCTTCCGTGATTGGGAGGC+TGG 0.257155 3.2:-37316476 MS.gene92026:CDS
TGGCCTAATGTAGAGTTCTT+AGG 0.292763 3.2:-37314504 MS.gene92026:CDS
CCCTGGTGGTCACGGTCTTA+TGG 0.297326 3.2:-37314886 MS.gene92026:CDS
GTAGATAACCTGTTCTTTGC+AGG 0.310883 3.2:-37313832 MS.gene92026:CDS
TCCTTGTTTACATGCCTTCT+GGG 0.312872 3.2:-37314413 MS.gene92026:CDS
GTGCAGCCTTGTGGAGATTA+AGG 0.314384 3.2:+37314445 None:intergenic
AATACCACTGAAGTACCTTA+TGG 0.326701 3.2:+37315659 None:intergenic
TCCTTCCAGTCTGGGAGCCT+TGG 0.329966 3.2:+37314594 None:intergenic
CACCCTTGCCTGCAGGTTGG+AGG 0.354805 3.2:-37315689 MS.gene92026:intron
ACCCTTGCCTGCAGGTTGGA+GGG 0.360613 3.2:-37315688 MS.gene92026:intron
ATGGCAGCTTCCTTCCAGTC+TGG 0.360763 3.2:+37314585 None:intergenic
AATCCACTTGCTTCCGTGAT+TGG 0.366361 3.2:-37316484 MS.gene92026:CDS
TGTGCTATACGACCATGATT+TGG 0.368647 3.2:-37316419 MS.gene92026:CDS
ATTCACACTGATTACTCGTT+TGG 0.376822 3.2:-37316666 MS.gene92026:CDS
AAAGTTGTTCGGAGATATAA+TGG 0.377389 3.2:-37314717 MS.gene92026:CDS
CCCTTGCCTGCAGGTTGGAG+GGG 0.377945 3.2:-37315687 MS.gene92026:intron
TTGGCTAGGGTATTTATAAC+AGG 0.381256 3.2:+37314849 None:intergenic
GTTTGGCTTTCCTGTTGACC+TGG 0.381528 3.2:-37316649 MS.gene92026:CDS
CAGCTATGCACTTTATGATA+AGG 0.384844 3.2:-37316209 MS.gene92026:CDS
ACGAGTAATCAGTGTGAATT+CGG 0.387049 3.2:+37316670 None:intergenic
ATCCACTTGCTTCCGTGATT+GGG 0.395016 3.2:-37316483 MS.gene92026:CDS
GTGGTCACGGTCTTATGGTC+AGG 0.401367 3.2:-37314881 MS.gene92026:CDS
GTAGTTGCAGATACATCTTA+TGG 0.402239 3.2:-37314480 MS.gene92026:CDS
ATCTTCAGCCGCCATCATTC+CGG 0.405601 3.2:+37313759 None:intergenic
CATGATGCTCCCAGGTCAAC+AGG 0.413656 3.2:+37316639 None:intergenic
CCTTGTGTCTCGGTGGGGCT+CGG 0.415357 3.2:-37313932 MS.gene92026:CDS
GTTGGAGGGGCTTGCCCATA+AGG 0.416665 3.2:-37315674 MS.gene92026:CDS
ATCCCCACTAGTACGGTAAA+GGG 0.417780 3.2:+37316447 None:intergenic
ATGCGTGTGCTGGAGCGATA+TGG 0.419719 3.2:-37313730 MS.gene92026:CDS
GAAGCTGCCATCGCTGAACT+TGG 0.421827 3.2:-37314573 MS.gene92026:CDS
TACAATTTCACTGAATGGTT+GGG 0.424536 3.2:-37315599 MS.gene92026:CDS
GAATCAAGTTCCCCAGGAAT+TGG 0.428359 3.2:-37316182 MS.gene92026:CDS
TTGCTTCCCCTGCAAAGAAC+AGG 0.428680 3.2:+37313824 None:intergenic
AATTGAAAGACCACGCTGTA+TGG 0.437376 3.2:+37315815 None:intergenic
GGATTTGTTTCAGCCGGTGA+TGG 0.439407 3.2:-37313701 MS.gene92026:CDS
GCTTCCGTGATTGGGAGGCT+GGG 0.440070 3.2:-37316475 MS.gene92026:CDS
AGGTTGTTCTCTTAGAGTCT+AGG 0.441740 3.2:-37316707 MS.gene92026:CDS
TCAGAGTCACAAAAGTTGTT+CGG 0.444089 3.2:-37314728 MS.gene92026:intron
ATACCACTGAAGTACCTTAT+GGG 0.446467 3.2:+37315660 None:intergenic
GCTATTGTTGCTGTCCCTCT+TGG 0.453416 3.2:-37314648 MS.gene92026:CDS
TGGCAGCTTCCTTCCAGTCT+GGG 0.455520 3.2:+37314586 None:intergenic
ACTCCTAAGAACTCTACATT+AGG 0.462175 3.2:+37314501 None:intergenic
TGATGGCGGCTGAAGATTGC+AGG 0.464362 3.2:-37313753 MS.gene92026:CDS
TCTGATACAATTTCACTGAA+TGG 0.465141 3.2:-37315604 MS.gene92026:CDS
ATACAATTTCACTGAATGGT+TGG 0.469296 3.2:-37315600 MS.gene92026:CDS
TTGAACCAAGGCTCCCAGAC+TGG 0.469830 3.2:-37314599 MS.gene92026:CDS
TCATTGGTGGTGGCATGGCT+GGG 0.470492 3.2:-37317620 None:intergenic
AGTAAGAAGTGAATTCAATC+AGG 0.471322 3.2:-37315844 MS.gene92026:CDS
TCAGTACCTTGTGTCTCGGT+GGG 0.472113 3.2:-37313938 MS.gene92026:CDS
AATGCACCATGGACAGATCC+TGG 0.482031 3.2:+37313787 None:intergenic
GCAACAAGTATGAGCTATCC+AGG 0.482634 3.2:-37313805 MS.gene92026:CDS
ACTATATCTACCTGTGTCCT+AGG 0.488050 3.2:+37314811 None:intergenic
CAGGAATTGGTAACAAAAGT+TGG 0.495412 3.2:-37316169 MS.gene92026:CDS
TGCATTCTTCACCGGAATGA+TGG 0.495788 3.2:-37313770 MS.gene92026:CDS
GAAGGCATGTAAACAAGGAC+AGG 0.496470 3.2:+37314417 None:intergenic
ATACATACCTTTCCAAATCA+TGG 0.498622 3.2:+37316407 None:intergenic
GTAAAAGTGACCGTGGAAAG+TGG 0.500352 3.2:-37314693 MS.gene92026:CDS
GGTTGTTCTCTTAGAGTCTA+GGG 0.501117 3.2:-37316706 MS.gene92026:CDS
AAGCTGCCATCGCTGAACTT+GGG 0.502576 3.2:-37314572 MS.gene92026:CDS
TTGATATTCGCCTAGGACAC+AGG 0.503732 3.2:-37314821 MS.gene92026:intron
TTCACTGAATGGTTGGGACC+AGG 0.505370 3.2:-37315593 MS.gene92026:intron
GCAAAGAACAGGTTATCTAC+TGG 0.506541 3.2:+37313835 None:intergenic
GTACTTCTCCCTGGTGGTCA+CGG 0.506945 3.2:-37314894 MS.gene92026:CDS
TTTGGCTTTCCTGTTGACCT+GGG 0.506960 3.2:-37316648 MS.gene92026:CDS
TCAGTGGTATTTATGCAGAA+TGG 0.507222 3.2:-37315647 MS.gene92026:CDS
ACCATAAGACCGTGACCACC+AGG 0.507322 3.2:+37314885 None:intergenic
GCCATCGCTGAACTTGGGGT+TGG 0.509174 3.2:-37314567 MS.gene92026:CDS
GGGCTCGGATATAAATTCAC+TGG 0.510358 3.2:-37313917 MS.gene92026:CDS
TGGTCACGGTCTTATGGTCA+GGG 0.511034 3.2:-37314880 MS.gene92026:CDS
GTTACCGGTGAGGAAGCATT+AGG 0.513639 3.2:+37314312 None:intergenic
GATTTGTTTCAGCCGGTGAT+GGG 0.513807 3.2:-37313700 MS.gene92026:CDS
TATCCCCACTAGTACGGTAA+AGG 0.515136 3.2:+37316446 None:intergenic
AGATTGCAGGATGCGTGTGC+TGG 0.516520 3.2:-37313740 MS.gene92026:CDS
CAAAGAACAGGTTATCTACT+GGG 0.522750 3.2:+37313836 None:intergenic
TATGCACTTTATGATAAGGA+TGG 0.523913 3.2:-37316205 MS.gene92026:CDS
TACCCCTTTACCGTACTAGT+GGG 0.524830 3.2:-37316450 MS.gene92026:CDS
TGACAGGAAGTACTTCTCCC+TGG 0.530151 3.2:-37314903 MS.gene92026:intron
AGCTGCCATCGCTGAACTTG+GGG 0.530403 3.2:-37314571 MS.gene92026:CDS
CTTCCGTGATTGGGAGGCTG+GGG 0.536451 3.2:-37316474 MS.gene92026:CDS
AAGGTTGCATGGAGTTTGCA+AGG 0.539925 3.2:-37316509 MS.gene92026:CDS
GTCCATGGTGCATTCTTCAC+CGG 0.540067 3.2:-37313778 MS.gene92026:CDS
CATATAGCTATGATCAAGTA+GGG 0.542982 3.2:-37313891 MS.gene92026:CDS
ATTTATGCAGAATGGAGGGC+TGG 0.545277 3.2:-37315639 MS.gene92026:CDS
TCATATAGCTATGATCAAGT+AGG 0.546091 3.2:-37313892 MS.gene92026:CDS
CACTTGCTTCCGTGATTGGG+AGG 0.546419 3.2:-37316480 MS.gene92026:CDS
AGCTTTACCATGATGCTCCC+AGG 0.548394 3.2:+37316631 None:intergenic
TTCAGTACCTTGTGTCTCGG+TGG 0.550816 3.2:-37313939 MS.gene92026:CDS
GAATATCAAGACCCTTGGCT+AGG 0.556541 3.2:+37314835 None:intergenic
GCCCAGAAGGCATGTAAACA+AGG 0.556908 3.2:+37314412 None:intergenic
TAGATAACCTGTTCTTTGCA+GGG 0.560689 3.2:-37313831 MS.gene92026:CDS
CAGGGTGACGTGCAGCCTTG+TGG 0.561709 3.2:+37314436 None:intergenic
CAGAGTTATCCCCACTAGTA+CGG 0.561719 3.2:+37316440 None:intergenic
GGATGGGAATCAAGTTCCCC+AGG 0.564440 3.2:-37316188 MS.gene92026:CDS
TCAGCCGGTGATGGGAGAGA+TGG 0.564649 3.2:-37313692 MS.gene92026:CDS
CCTTCCTAATGCTTCCTCAC+CGG 0.564781 3.2:-37314316 MS.gene92026:intron
AGAGCTGGATTTGTTTCAGC+CGG 0.565941 3.2:-37313707 MS.gene92026:CDS
GAGTCTAGGGAAAGACTTGG+TGG 0.566001 3.2:-37316693 MS.gene92026:CDS
GAAAACATTTATTGCTGATG+CGG 0.570570 3.2:-37314670 MS.gene92026:CDS
TCTTTGGCAAGCCGCCCAGA+AGG 0.571780 3.2:+37314399 None:intergenic
AATATCAAGACCCTTGGCTA+GGG 0.576929 3.2:+37314836 None:intergenic
ACCAAGGCTCCCAGACTGGA+AGG 0.580515 3.2:-37314595 MS.gene92026:CDS
TAACCCCAGCCTCCCAATCA+CGG 0.581134 3.2:+37316471 None:intergenic
CTGTTGACCTGGGAGCATCA+TGG 0.583662 3.2:-37316638 MS.gene92026:intron
AGCCTTTCGTACAGTTCATG+TGG 0.584219 3.2:+37313865 None:intergenic
ATGCACTTTATGATAAGGAT+GGG 0.585309 3.2:-37316204 MS.gene92026:CDS
GGCTCGGATATAAATTCACT+GGG 0.586636 3.2:-37313916 MS.gene92026:CDS
GTGGTATTTATGCAGAATGG+AGG 0.590217 3.2:-37315644 MS.gene92026:CDS
TGTTATAAATACCCTAGCCA+AGG 0.590267 3.2:-37314847 MS.gene92026:CDS
TACATACGAGATATCTGAAG+TGG 0.590541 3.2:+37313655 None:intergenic
TAAAAGTGACCGTGGAAAGT+GGG 0.591051 3.2:-37314692 MS.gene92026:CDS
TAGGCGAATATCAAGACCCT+TGG 0.592447 3.2:+37314830 None:intergenic
TCCAACCCCAAGTTCAGCGA+TGG 0.600909 3.2:+37314566 None:intergenic
GAAGCCATCTCTCCCATCAC+CGG 0.600986 3.2:+37313688 None:intergenic
AGATAACCTGTTCTTTGCAG+GGG 0.601498 3.2:-37313830 MS.gene92026:CDS
AGCTATCCAGGATCTGTCCA+TGG 0.605077 3.2:-37313793 MS.gene92026:CDS
ATTGAGGTCAAATACCTGAA+AGG 0.606411 3.2:+37317566 None:intergenic
AAGGGTCTTGATATTCGCCT+AGG 0.607787 3.2:-37314828 MS.gene92026:CDS
AACCACATGAACTGTACGAA+AGG 0.610654 3.2:-37313867 MS.gene92026:CDS
AGATTCAGTACCTTGTGTCT+CGG 0.611152 3.2:-37313942 MS.gene92026:CDS
TTACCCCTTTACCGTACTAG+TGG 0.612175 3.2:-37316451 MS.gene92026:CDS
GCTGGAGCGATATGGAGAGC+TGG 0.616379 3.2:-37313722 MS.gene92026:CDS
TGGTATTTATGCAGAATGGA+GGG 0.621034 3.2:-37315643 MS.gene92026:CDS
TTGCTTTAAGTACACCAAGA+GGG 0.622687 3.2:+37314634 None:intergenic
TTGGTGTACTTAAAGCAAAG+AGG 0.628228 3.2:-37314629 MS.gene92026:CDS
AGAGGATATCATTTGAACCA+AGG 0.632510 3.2:-37314611 MS.gene92026:CDS
CCGAGCCCCACCGAGACACA+AGG 0.638728 3.2:+37313932 None:intergenic
TATACGACCATGATTTGGAA+AGG 0.638994 3.2:-37316414 MS.gene92026:intron
CTACTTCCTTAATCTCCACA+AGG 0.640054 3.2:-37314451 MS.gene92026:CDS
CTCCCAATCACGGAAGCAAG+TGG 0.641232 3.2:+37316481 None:intergenic
CCGGTGAGGAAGCATTAGGA+AGG 0.650028 3.2:+37314316 None:intergenic
ATTCTTCACCGGAATGATGG+CGG 0.650475 3.2:-37313767 MS.gene92026:CDS
ACCCCTTTACCGTACTAGTG+GGG 0.654223 3.2:-37316449 MS.gene92026:CDS
TAATGGAGTAAAAGTGACCG+TGG 0.655219 3.2:-37314700 MS.gene92026:CDS
TCCCCACTAGTACGGTAAAG+GGG 0.656059 3.2:+37316448 None:intergenic
AAATAGAGTGGTTACCGGTG+AGG 0.656355 3.2:+37314302 None:intergenic
CAGTACCTTGTGTCTCGGTG+GGG 0.656791 3.2:-37313937 MS.gene92026:CDS
TTAGAGTCTAGGGAAAGACT+TGG 0.664498 3.2:-37316696 MS.gene92026:CDS
ACATACGAGATATCTGAAGT+GGG 0.666300 3.2:+37313656 None:intergenic
GTTATAAATACCCTAGCCAA+GGG 0.673303 3.2:-37314846 MS.gene92026:CDS
TTTGCTTTAAGTACACCAAG+AGG 0.681981 3.2:+37314633 None:intergenic
TTGCCCATAAGGTACTTCAG+TGG 0.691649 3.2:-37315663 MS.gene92026:CDS
GGTCACGGTCTTATGGTCAG+GGG 0.695895 3.2:-37314879 MS.gene92026:CDS
TATCTGAAGTGGGATAGTCA+AGG 0.700126 3.2:+37313666 None:intergenic
CCATAAGACCGTGACCACCA+GGG 0.700855 3.2:+37314886 None:intergenic
AAGGCATGTAAACAAGGACA+GGG 0.701185 3.2:+37314418 None:intergenic
TTCCGGTGAAGAATGCACCA+TGG 0.701225 3.2:+37313776 None:intergenic
TTGTTTACATGCCTTCTGGG+CGG 0.705606 3.2:-37314410 MS.gene92026:CDS
CAGGAAGTACTTCTCCCTGG+TGG 0.730430 3.2:-37314900 MS.gene92026:CDS
CAGGACATGTCCATACAGCG+TGG 0.757921 3.2:-37315825 MS.gene92026:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTAATTATATTTGTAAAA+TGG - chr3.2:37313897-37313916 MS.gene92026:CDS 10.0%
!!! AAAAAAATTGAAATTTTAGT+TGG + chr3.2:37314955-37314974 None:intergenic 10.0%
!! AGAAAAATACGAAATAAAAA+AGG + chr3.2:37314075-37314094 None:intergenic 15.0%
!! GAAAAATACGAAATAAAAAA+GGG + chr3.2:37314074-37314093 None:intergenic 15.0%
!! GACAAATAATTAAAATACAT+AGG + chr3.2:37317288-37317307 None:intergenic 15.0%
!! TAATTATATTTGTAAAATGG+TGG - chr3.2:37313900-37313919 MS.gene92026:CDS 15.0%
!!! CCATTTATTTTCTTATTAAA+AGG - chr3.2:37314710-37314729 MS.gene92026:CDS 15.0%
!!! CCTTTTAATAAGAAAATAAA+TGG + chr3.2:37314713-37314732 None:intergenic 15.0%
!!! GCTTTAATTTAGTTAATTTA+TGG - chr3.2:37317262-37317281 MS.gene92026:intron 15.0%
!! AAACACATTTACATGATTAT+CGG + chr3.2:37315899-37315918 None:intergenic 20.0%
!! ATCATTTAGTGTGTAAATTA+AGG + chr3.2:37315768-37315787 None:intergenic 20.0%
!! ATTAGATAAGTCTTTATTGT+AGG - chr3.2:37317056-37317075 MS.gene92026:intron 20.0%
!! GGTTCATAAAAATAAATACA+AGG + chr3.2:37314104-37314123 None:intergenic 20.0%
!! GTTTAATTAAGAAACATAAC+AGG + chr3.2:37316502-37316521 None:intergenic 20.0%
!! TGAAATAAGTAAAAATAGAG+TGG + chr3.2:37316973-37316992 None:intergenic 20.0%
!! TGATAATAAAAAAGGCTATT+TGG - chr3.2:37315265-37315284 MS.gene92026:intron 20.0%
!! TTGTAGTATCAATATGAATA+TGG + chr3.2:37317140-37317159 None:intergenic 20.0%
!!! AGTATTTGAAACTATTTTAC+TGG - chr3.2:37315117-37315136 MS.gene92026:intron 20.0%
!!! CGCTTTGTTTTTTAATTTTT+TGG - chr3.2:37314528-37314547 MS.gene92026:CDS 20.0%
!!! GGAAAAAAATATTTTTACTG+TGG + chr3.2:37315309-37315328 None:intergenic 20.0%
!!! TACATTTTGAGAATGTATTT+TGG - chr3.2:37316736-37316755 MS.gene92026:intron 20.0%
!!! TCTTATTTAGTCTTGTTATT+TGG - chr3.2:37315153-37315172 MS.gene92026:intron 20.0%
!!! TGTTTTTTAATTTTTTGGTC+AGG - chr3.2:37314533-37314552 MS.gene92026:CDS 20.0%
!!! TTCTGGTTTGATAATAAAAA+AGG - chr3.2:37315257-37315276 MS.gene92026:intron 20.0%
! AAACATTAGAAGAGATGATT+TGG + chr3.2:37315330-37315349 None:intergenic 25.0%
! AATGCATATTAATTGATTGC+AGG + chr3.2:37314485-37314504 None:intergenic 25.0%
! AGTAAAACTATAGCTCTTAA+AGG - chr3.2:37314005-37314024 MS.gene92026:intron 25.0%
! AGTTTACAAAGAATTTGATG+TGG - chr3.2:37313936-37313955 MS.gene92026:CDS 25.0%
! CAAATTATATCTTTCACTAC+AGG + chr3.2:37315822-37315841 None:intergenic 25.0%
! GACTTATCTAATCTTATGTT+TGG + chr3.2:37317048-37317067 None:intergenic 25.0%
! GCTCATAAATCAAAATATTG+AGG + chr3.2:37313713-37313732 None:intergenic 25.0%
! GTAAAACTATAGCTCTTAAA+GGG - chr3.2:37314006-37314025 MS.gene92026:intron 25.0%
! GTGTTTACTGATCTATAAAT+AGG - chr3.2:37315913-37315932 MS.gene92026:intron 25.0%
! GTTTACAAAGAATTTGATGT+GGG - chr3.2:37313937-37313956 MS.gene92026:CDS 25.0%
! GTTTACTACAAATGATTGTT+AGG - chr3.2:37315175-37315194 MS.gene92026:intron 25.0%
! TCCAGAATTAAGGTTATTAT+TGG - chr3.2:37315482-37315501 MS.gene92026:intron 25.0%
! TTTGCAATATGCTGTAATTA+GGG + chr3.2:37316283-37316302 None:intergenic 25.0%
!! ACAAATGATTGTTAGGTTTT+GGG - chr3.2:37315182-37315201 MS.gene92026:intron 25.0%
!! GTATTTTCTAATGTTCTTCA+TGG + chr3.2:37316211-37316230 None:intergenic 25.0%
!! GTCGTTTCTTATTTAATAAC+TGG - chr3.2:37314340-37314359 MS.gene92026:CDS 25.0%
!! GTTGATTTCTTTAAATTACC+TGG + chr3.2:37315688-37315707 None:intergenic 25.0%
!! GTTTCCTATTATTTGAAACT+TGG - chr3.2:37314443-37314462 MS.gene92026:CDS 25.0%
!! TACAAATGATTGTTAGGTTT+TGG - chr3.2:37315181-37315200 MS.gene92026:intron 25.0%
!!! AGACATTTTTTCAATGTCTT+TGG + chr3.2:37316880-37316899 None:intergenic 25.0%
!!! ATTTGAAACTATTTTACTGG+AGG - chr3.2:37315120-37315139 MS.gene92026:intron 25.0%
!!! GTCTTTCAATTGTTTTTGAA+AGG - chr3.2:37315457-37315476 MS.gene92026:intron 25.0%
AAAGTTGTTCGGAGATATAA+TGG - chr3.2:37316543-37316562 MS.gene92026:intron 30.0%
AAATCAGTATTATGGCTGTA+GGG - chr3.2:37316142-37316161 MS.gene92026:CDS 30.0%
AACCAAGGACAAAATTTCAA+AGG + chr3.2:37315380-37315399 None:intergenic 30.0%
ACATATAATACCTTCTACGT+CGG + chr3.2:37314996-37315015 None:intergenic 30.0%
ACATATTACATTGCCAACAT+TGG + chr3.2:37314150-37314169 None:intergenic 30.0%
AGAATCAAACAAATCCAGAT+GGG - chr3.2:37316058-37316077 MS.gene92026:intron 30.0%
AGCTCCAAGTTTCAAATAAT+AGG + chr3.2:37314450-37314469 None:intergenic 30.0%
AGTAAAAATAGAGTGGTTAC+CGG + chr3.2:37316966-37316985 None:intergenic 30.0%
AGTAAGAAGTGAATTCAATC+AGG - chr3.2:37315416-37315435 MS.gene92026:intron 30.0%
ATACAATTTCACTGAATGGT+TGG - chr3.2:37315660-37315679 MS.gene92026:CDS 30.0%
ATACATACCTTTCCAAATCA+TGG + chr3.2:37314856-37314875 None:intergenic 30.0%
ATATTACATTGCCAACATTG+GGG + chr3.2:37314148-37314167 None:intergenic 30.0%
ATGCACTTTATGATAAGGAT+GGG - chr3.2:37315056-37315075 MS.gene92026:intron 30.0%
ATGCTGTGAAATCAGTATTA+TGG - chr3.2:37316134-37316153 MS.gene92026:intron 30.0%
ATTATATTTCCACCTCATCA+TGG + chr3.2:37314392-37314411 None:intergenic 30.0%
CATATAGCTATGATCAAGTA+GGG - chr3.2:37317369-37317388 MS.gene92026:intron 30.0%
CATATTACATTGCCAACATT+GGG + chr3.2:37314149-37314168 None:intergenic 30.0%
GAAAACATTTATTGCTGATG+CGG - chr3.2:37316590-37316609 MS.gene92026:intron 30.0%
GATTGCAATTATCCGTTAAT+GGG - chr3.2:37313818-37313837 MS.gene92026:CDS 30.0%
GCCAATAATAACCTTAATTC+TGG + chr3.2:37315486-37315505 None:intergenic 30.0%
GTTTGCAATATGCTGTAATT+AGG + chr3.2:37316284-37316303 None:intergenic 30.0%
TAAAAGATTCCTTTCATGAC+AGG - chr3.2:37316088-37316107 MS.gene92026:intron 30.0%
TAAATTAAGGACAAGAAGGT+GGG + chr3.2:37315755-37315774 None:intergenic 30.0%
TACAATTTCACTGAATGGTT+GGG - chr3.2:37315661-37315680 MS.gene92026:CDS 30.0%
TAGAATCAAACAAATCCAGA+TGG - chr3.2:37316057-37316076 MS.gene92026:intron 30.0%
TATGCACTTTATGATAAGGA+TGG - chr3.2:37315055-37315074 MS.gene92026:intron 30.0%
TCATATAGCTATGATCAAGT+AGG - chr3.2:37317368-37317387 MS.gene92026:intron 30.0%
TCCTGTCAAAATATATTCAG+AGG + chr3.2:37316345-37316364 None:intergenic 30.0%
TCTGATACAATTTCACTGAA+TGG - chr3.2:37315656-37315675 MS.gene92026:CDS 30.0%
TGATTGCAATTATCCGTTAA+TGG - chr3.2:37313817-37313836 MS.gene92026:CDS 30.0%
TGTGTAAATTAAGGACAAGA+AGG + chr3.2:37315759-37315778 None:intergenic 30.0%
TTACATGCATAACAACACAA+TGG + chr3.2:37315991-37316010 None:intergenic 30.0%
TTGAAAGGAATCCAGAATTA+AGG - chr3.2:37315472-37315491 MS.gene92026:intron 30.0%
! AACTTTTGTTACCAATTCCT+GGG + chr3.2:37315092-37315111 None:intergenic 30.0%
! AATATGCATTTTCAGAGTCT+AGG - chr3.2:37314495-37314514 MS.gene92026:CDS 30.0%
! ATATGCATTTTCAGAGTCTA+GGG - chr3.2:37314496-37314515 MS.gene92026:CDS 30.0%
! ATGCTTGCTAGTTTAGATTT+GGG - chr3.2:37313962-37313981 MS.gene92026:intron 30.0%
! CAAATGATTGTTAGGTTTTG+GGG - chr3.2:37315183-37315202 MS.gene92026:intron 30.0%
! TTTGTAAAATGGTGGAAATC+TGG - chr3.2:37313908-37313927 MS.gene92026:CDS 30.0%
!! ATACATATTTTTGTAGCCTG+TGG - chr3.2:37314365-37314384 MS.gene92026:CDS 30.0%
!!! AACCTTTGAAATTTTGTCCT+TGG - chr3.2:37315375-37315394 MS.gene92026:intron 30.0%
!!! ACCTCTGAATATATTTTGAC+AGG - chr3.2:37316341-37316360 MS.gene92026:intron 30.0%
!!! CTAGGTCAAGTTAGTTTTAA+AGG + chr3.2:37316255-37316274 None:intergenic 30.0%
!!! GAACACTTTTTTCCTGTTTA+AGG - chr3.2:37314732-37314751 MS.gene92026:intron 30.0%
AAACCAGAAATGTAGTGCAA+AGG + chr3.2:37315246-37315265 None:intergenic 35.0%
AAAGAAAACAATCACGGTCT+CGG + chr3.2:37315525-37315544 None:intergenic 35.0%
AAATTAAGGACAAGAAGGTG+GGG + chr3.2:37315754-37315773 None:intergenic 35.0%
ACAAAATGACCTGTCATGAA+AGG + chr3.2:37316100-37316119 None:intergenic 35.0%
ACGAGTAATCAGTGTGAATT+CGG + chr3.2:37314593-37314612 None:intergenic 35.0%
ACTCCTAAGAACTCTACATT+AGG + chr3.2:37316762-37316781 None:intergenic 35.0%
AGAGGATATCATTTGAACCA+AGG - chr3.2:37316649-37316668 MS.gene92026:CDS 35.0%
AGATCTCGATTAGAAGATAG+AGG + chr3.2:37313865-37313884 None:intergenic 35.0%
AGATTATAGTGAACTGAGCA+GGG + chr3.2:37317093-37317112 None:intergenic 35.0%
ATATGGTTCCATAGAACTAG+TGG + chr3.2:37317123-37317142 None:intergenic 35.0%
ATTGAGGTCAAATACCTGAA+AGG + chr3.2:37313697-37313716 None:intergenic 35.0%
CAAACACATGAATTACTGTC+GGG + chr3.2:37314125-37314144 None:intergenic 35.0%
CAAAGAACAGGTTATCTACT+GGG + chr3.2:37317427-37317446 None:intergenic 35.0%
CACAGTAACACAATATACTG+AGG + chr3.2:37314191-37314210 None:intergenic 35.0%
CAGCTATGCACTTTATGATA+AGG - chr3.2:37315051-37315070 MS.gene92026:intron 35.0%
CAGTTCACTATAATCTACAC+AGG - chr3.2:37317097-37317116 MS.gene92026:intron 35.0%
CATGATTATCGGTCATAGAA+AGG + chr3.2:37315888-37315907 None:intergenic 35.0%
CATTCAGACAATCCCATTAA+CGG + chr3.2:37313833-37313852 None:intergenic 35.0%
CCGCTTAAAGAAAACAATCA+CGG + chr3.2:37315531-37315550 None:intergenic 35.0%
CGTCGGATAAAACTAGAAAA+AGG + chr3.2:37314979-37314998 None:intergenic 35.0%
CTCATAGCATACACAGTAAA+GGG + chr3.2:37317242-37317261 None:intergenic 35.0%
CTTATCATAAAGTGCATAGC+TGG + chr3.2:37315053-37315072 None:intergenic 35.0%
GAAATCAGTATTATGGCTGT+AGG - chr3.2:37316141-37316160 MS.gene92026:CDS 35.0%
GATCTCGATTAGAAGATAGA+GGG + chr3.2:37313864-37313883 None:intergenic 35.0%
GCAAACACATGAATTACTGT+CGG + chr3.2:37314126-37314145 None:intergenic 35.0%
GCTGTAATTAGGGTAAAACT+AGG + chr3.2:37316273-37316292 None:intergenic 35.0%
GTAAATTAAGGACAAGAAGG+TGG + chr3.2:37315756-37315775 None:intergenic 35.0%
GTAGTTGCAGATACATCTTA+TGG - chr3.2:37316780-37316799 MS.gene92026:intron 35.0%
GTTATAAATACCCTAGCCAA+GGG - chr3.2:37316414-37316433 MS.gene92026:intron 35.0%
TAAAGTGCATAGCTGGAATA+AGG + chr3.2:37315046-37315065 None:intergenic 35.0%
TACATACGAGATATCTGAAG+TGG + chr3.2:37317608-37317627 None:intergenic 35.0%
TAGATAACCTGTTCTTTGCA+GGG - chr3.2:37317429-37317448 MS.gene92026:intron 35.0%
TAGATTATAGTGAACTGAGC+AGG + chr3.2:37317094-37317113 None:intergenic 35.0%
TATTCGTCTGCATTTAACCA+AGG + chr3.2:37315395-37315414 None:intergenic 35.0%
TCAGAGTCACAAAAGTTGTT+CGG - chr3.2:37316532-37316551 MS.gene92026:intron 35.0%
TCAGTGGTATTTATGCAGAA+TGG - chr3.2:37315613-37315632 MS.gene92026:CDS 35.0%
TGCATGATTCCTAAAAAGGA+GGG + chr3.2:37314303-37314322 None:intergenic 35.0%
TGGTATTTATGCAGAATGGA+GGG - chr3.2:37315617-37315636 MS.gene92026:CDS 35.0%
TGTTATAAATACCCTAGCCA+AGG - chr3.2:37316413-37316432 MS.gene92026:intron 35.0%
TGTTATCTACTATGCAAGTG+TGG + chr3.2:37314912-37314931 None:intergenic 35.0%
TTGGTGTACTTAAAGCAAAG+AGG - chr3.2:37316631-37316650 MS.gene92026:intron 35.0%
TTTAGGCCTCACATTTCTTT+GGG - chr3.2:37317212-37317231 MS.gene92026:intron 35.0%
TTTCTAATGTTCTTCATGGC+AGG + chr3.2:37316207-37316226 None:intergenic 35.0%
! AAATGTTTTCCCACTTTCCA+CGG + chr3.2:37316580-37316599 None:intergenic 35.0%
! AATACCACTGAAGTACCTTA+TGG + chr3.2:37315604-37315623 None:intergenic 35.0%
! ACATACGAGATATCTGAAGT+GGG + chr3.2:37317607-37317626 None:intergenic 35.0%
! ACTTTTGTTACCAATTCCTG+GGG + chr3.2:37315091-37315110 None:intergenic 35.0%
! ATACCACTGAAGTACCTTAT+GGG + chr3.2:37315603-37315622 None:intergenic 35.0%
! ATTCACACTGATTACTCGTT+TGG - chr3.2:37314594-37314613 MS.gene92026:CDS 35.0%
! CAACTTTTGTTACCAATTCC+TGG + chr3.2:37315093-37315112 None:intergenic 35.0%
! CAGGAATTGGTAACAAAAGT+TGG - chr3.2:37315091-37315110 MS.gene92026:intron 35.0%
! CCGTGATTGTTTTCTTTAAG+CGG - chr3.2:37315528-37315547 MS.gene92026:intron 35.0%
! GATGCTTGCTAGTTTAGATT+TGG - chr3.2:37313961-37313980 MS.gene92026:intron 35.0%
! TATACGACCATGATTTGGAA+AGG - chr3.2:37314846-37314865 MS.gene92026:CDS 35.0%
! TGCTTGCTAGTTTAGATTTG+GGG - chr3.2:37313963-37313982 MS.gene92026:intron 35.0%
! TTGCTTTAAGTACACCAAGA+GGG + chr3.2:37316629-37316648 None:intergenic 35.0%
! TTGGCTAGGGTATTTATAAC+AGG + chr3.2:37316414-37316433 None:intergenic 35.0%
! TTTCAGTTTTTAATCGCGCT+AGG - chr3.2:37316988-37317007 MS.gene92026:intron 35.0%
! TTTGCTTTAAGTACACCAAG+AGG + chr3.2:37316630-37316649 None:intergenic 35.0%
!! ACTTTTGTGACTCTGAAAAG+AGG + chr3.2:37316528-37316547 None:intergenic 35.0%
!! TTTTCCTGTTTAAGGTTGCA+TGG - chr3.2:37314740-37314759 MS.gene92026:intron 35.0%
AAACATAGAGAGACCAGGTT+AGG - chr3.2:37315952-37315971 MS.gene92026:intron 40.0%
AACATAGAGAGACCAGGTTA+GGG - chr3.2:37315953-37315972 MS.gene92026:intron 40.0%
AACCACATGAACTGTACGAA+AGG - chr3.2:37317393-37317412 MS.gene92026:intron 40.0%
AACTCCATGCAACCTTAAAC+AGG + chr3.2:37314747-37314766 None:intergenic 40.0%
AAGGCATGTAAACAAGGACA+GGG + chr3.2:37316845-37316864 None:intergenic 40.0%
AATATCAAGACCCTTGGCTA+GGG + chr3.2:37316427-37316446 None:intergenic 40.0%
AATTGAAAGACCACGCTGTA+TGG + chr3.2:37315448-37315467 None:intergenic 40.0%
ACCAGGTTAGGGGATAAAAA+TGG - chr3.2:37315964-37315983 MS.gene92026:intron 40.0%
ACTATATCTACCTGTGTCCT+AGG + chr3.2:37316452-37316471 None:intergenic 40.0%
ACTTCAAGATGCTTCCTTTC+AGG - chr3.2:37313680-37313699 MS.gene92026:CDS 40.0%
AGATAACCTGTTCTTTGCAG+GGG - chr3.2:37317430-37317449 MS.gene92026:intron 40.0%
AGATTCAGTACCTTGTGTCT+CGG - chr3.2:37317318-37317337 MS.gene92026:intron 40.0%
AGGTTGTTCTCTTAGAGTCT+AGG - chr3.2:37314553-37314572 MS.gene92026:CDS 40.0%
ATGATTCCTAAAAAGGAGGG+AGG + chr3.2:37314300-37314319 None:intergenic 40.0%
ATGCCTTTGCACTACATTTC+TGG - chr3.2:37315240-37315259 MS.gene92026:intron 40.0%
CAAACAAATCCAGATGGGAA+GGG - chr3.2:37316063-37316082 MS.gene92026:intron 40.0%
CAAAGAAATGTGAGGCCTAA+AGG + chr3.2:37317213-37317232 None:intergenic 40.0%
CCTCATAGCATACACAGTAA+AGG + chr3.2:37317243-37317262 None:intergenic 40.0%
CCTTTACTGTGTATGCTATG+AGG - chr3.2:37317240-37317259 MS.gene92026:intron 40.0%
CTACTTCCTTAATCTCCACA+AGG - chr3.2:37316809-37316828 MS.gene92026:intron 40.0%
CTCTCTTTCGTGTTACATAC+AGG - chr3.2:37315791-37315810 MS.gene92026:CDS 40.0%
CTTTAGGCCTCACATTTCTT+TGG - chr3.2:37317211-37317230 MS.gene92026:intron 40.0%
GCAAAGAACAGGTTATCTAC+TGG + chr3.2:37317428-37317447 None:intergenic 40.0%
GCTGTGCATGATTCCTAAAA+AGG + chr3.2:37314307-37314326 None:intergenic 40.0%
GGCTCGGATATAAATTCACT+GGG - chr3.2:37317344-37317363 MS.gene92026:intron 40.0%
GGTTGTTCTCTTAGAGTCTA+GGG - chr3.2:37314554-37314573 MS.gene92026:CDS 40.0%
GTAGATAACCTGTTCTTTGC+AGG - chr3.2:37317428-37317447 MS.gene92026:intron 40.0%
GTGCATGATTCCTAAAAAGG+AGG + chr3.2:37314304-37314323 None:intergenic 40.0%
GTGGTATTTATGCAGAATGG+AGG - chr3.2:37315616-37315635 MS.gene92026:CDS 40.0%
TAAAAGTGACCGTGGAAAGT+GGG - chr3.2:37316568-37316587 MS.gene92026:intron 40.0%
TAATGGAGTAAAAGTGACCG+TGG - chr3.2:37316560-37316579 MS.gene92026:intron 40.0%
TCAAACAAATCCAGATGGGA+AGG - chr3.2:37316062-37316081 MS.gene92026:intron 40.0%
TGAAAACCTCACCTACCTTT+AGG - chr3.2:37317195-37317214 MS.gene92026:intron 40.0%
TGGCCTAATGTAGAGTTCTT+AGG - chr3.2:37316756-37316775 MS.gene92026:intron 40.0%
TGTGCTATACGACCATGATT+TGG - chr3.2:37314841-37314860 MS.gene92026:CDS 40.0%
TTACTGTGGAAATGCATAGC+AGG + chr3.2:37315295-37315314 None:intergenic 40.0%
TTAGAGTCTAGGGAAAGACT+TGG - chr3.2:37314564-37314583 MS.gene92026:CDS 40.0%
! AAGGCATCACTATAAGGTAG+AGG + chr3.2:37315227-37315246 None:intergenic 40.0%
! TATCTGAAGTGGGATAGTCA+AGG + chr3.2:37317597-37317616 None:intergenic 40.0%
! TCCTTGTTTACATGCCTTCT+GGG - chr3.2:37316847-37316866 MS.gene92026:intron 40.0%
!! AGTGCAAAGGCATCACTATA+AGG + chr3.2:37315233-37315252 None:intergenic 40.0%
!! TCCATTTTTATCCCCTAACC+TGG + chr3.2:37315968-37315987 None:intergenic 40.0%
!!! CTAGTTTTATCCGACGTAGA+AGG - chr3.2:37314983-37315002 MS.gene92026:intron 40.0%
AAATAGAGTGGTTACCGGTG+AGG + chr3.2:37316961-37316980 None:intergenic 45.0%
AAGGGTCTTGATATTCGCCT+AGG - chr3.2:37316432-37316451 MS.gene92026:CDS 45.0%
AAGGTTGCATGGAGTTTGCA+AGG - chr3.2:37314751-37314770 MS.gene92026:intron 45.0%
AATCCACTTGCTTCCGTGAT+TGG - chr3.2:37314776-37314795 MS.gene92026:intron 45.0%
ACATAGAGAGACCAGGTTAG+GGG - chr3.2:37315954-37315973 MS.gene92026:intron 45.0%
AGCCTTTCGTACAGTTCATG+TGG + chr3.2:37317398-37317417 None:intergenic 45.0%
ATCCACTTGCTTCCGTGATT+GGG - chr3.2:37314777-37314796 MS.gene92026:intron 45.0%
ATCCCCACTAGTACGGTAAA+GGG + chr3.2:37314816-37314835 None:intergenic 45.0%
ATGTTGAAGACTCATGCACC+TGG + chr3.2:37315861-37315880 None:intergenic 45.0%
ATTCTTCACCGGAATGATGG+CGG - chr3.2:37317493-37317512 MS.gene92026:intron 45.0%
ATTTATGCAGAATGGAGGGC+TGG - chr3.2:37315621-37315640 MS.gene92026:CDS 45.0%
CAGAGTTATCCCCACTAGTA+CGG + chr3.2:37314823-37314842 None:intergenic 45.0%
CGTTGAAACATAGAGAGACC+AGG - chr3.2:37315947-37315966 MS.gene92026:intron 45.0%
GAAATGTGAGGCCTAAAGGT+AGG + chr3.2:37317209-37317228 None:intergenic 45.0%
GAATATCAAGACCCTTGGCT+AGG + chr3.2:37316428-37316447 None:intergenic 45.0%
GAATCAAGTTCCCCAGGAAT+TGG - chr3.2:37315078-37315097 MS.gene92026:intron 45.0%
GCAACAAGTATGAGCTATCC+AGG - chr3.2:37317455-37317474 MS.gene92026:intron 45.0%
GGGCTCGGATATAAATTCAC+TGG - chr3.2:37317343-37317362 MS.gene92026:intron 45.0%
GTAAAAGTGACCGTGGAAAG+TGG - chr3.2:37316567-37316586 MS.gene92026:intron 45.0%
GTAGAGGAATCCAACTACGT+TGG + chr3.2:37315211-37315230 None:intergenic 45.0%
TACCCCTTTACCGTACTAGT+GGG - chr3.2:37314810-37314829 MS.gene92026:intron 45.0%
TAGGCGAATATCAAGACCCT+TGG + chr3.2:37316433-37316452 None:intergenic 45.0%
TATCCCCACTAGTACGGTAA+AGG + chr3.2:37314817-37314836 None:intergenic 45.0%
TCATGGCAGGTCTATGCAAA+GGG + chr3.2:37316194-37316213 None:intergenic 45.0%
TCATGTGTTTGCCCCAATGT+TGG - chr3.2:37314134-37314153 MS.gene92026:intron 45.0%
TGCATTCTTCACCGGAATGA+TGG - chr3.2:37317490-37317509 MS.gene92026:intron 45.0%
TGTAAAGTCGTCTCATAGCC+AGG - chr3.2:37315840-37315859 MS.gene92026:CDS 45.0%
TTACCCCTTTACCGTACTAG+TGG - chr3.2:37314809-37314828 MS.gene92026:intron 45.0%
TTCATGGCAGGTCTATGCAA+AGG + chr3.2:37316195-37316214 None:intergenic 45.0%
TTGATATTCGCCTAGGACAC+AGG - chr3.2:37316439-37316458 MS.gene92026:CDS 45.0%
TTGTTTACATGCCTTCTGGG+CGG - chr3.2:37316850-37316869 MS.gene92026:intron 45.0%
! AGAGCTGGATTTGTTTCAGC+CGG - chr3.2:37317553-37317572 MS.gene92026:intron 45.0%
! GAAGGCATGTAAACAAGGAC+AGG + chr3.2:37316846-37316865 None:intergenic 45.0%
! GATTTGTTTCAGCCGGTGAT+GGG - chr3.2:37317560-37317579 MS.gene92026:intron 45.0%
! GTCCTTGTTTACATGCCTTC+TGG - chr3.2:37316846-37316865 MS.gene92026:intron 45.0%
! TCTTTTACACCCTTCCCATC+TGG + chr3.2:37316075-37316094 None:intergenic 45.0%
! TTGCCCATAAGGTACTTCAG+TGG - chr3.2:37315597-37315616 MS.gene92026:CDS 45.0%
!! CACAAGGTACTGAATCTGCA+TGG + chr3.2:37317315-37317334 None:intergenic 45.0%
!! TACACAGGCCACTAGTTCTA+TGG - chr3.2:37317112-37317131 MS.gene92026:intron 45.0%
!! TTTGGCTTTCCTGTTGACCT+GGG - chr3.2:37314612-37314631 MS.gene92026:CDS 45.0%
AACTGAGCAGGGTGAACTAG+AGG + chr3.2:37317082-37317101 None:intergenic 50.0%
AAGCTGCCATCGCTGAACTT+GGG - chr3.2:37316688-37316707 MS.gene92026:CDS 50.0%
AATGCACCATGGACAGATCC+TGG + chr3.2:37317476-37317495 None:intergenic 50.0%
ACCCCTTTACCGTACTAGTG+GGG - chr3.2:37314811-37314830 MS.gene92026:intron 50.0%
AGCTATCCAGGATCTGTCCA+TGG - chr3.2:37317467-37317486 MS.gene92026:intron 50.0%
AGCTTTACCATGATGCTCCC+AGG + chr3.2:37314632-37314651 None:intergenic 50.0%
ATCTTCAGCCGCCATCATTC+CGG + chr3.2:37317504-37317523 None:intergenic 50.0%
CCTAAAAAGGAGGGAGGTAG+AGG + chr3.2:37314294-37314313 None:intergenic 50.0%
CCTTCCTAATGCTTCCTCAC+CGG - chr3.2:37316944-37316963 MS.gene92026:intron 50.0%
GAGTCTAGGGAAAGACTTGG+TGG - chr3.2:37314567-37314586 MS.gene92026:CDS 50.0%
GCTATTGTTGCTGTCCCTCT+TGG - chr3.2:37316612-37316631 MS.gene92026:intron 50.0%
GGTCAGCCCAAAGAAATGTG+AGG + chr3.2:37317221-37317240 None:intergenic 50.0%
GTCCATGGTGCATTCTTCAC+CGG - chr3.2:37317482-37317501 MS.gene92026:intron 50.0%
TCAGTACCTTGTGTCTCGGT+GGG - chr3.2:37317322-37317341 MS.gene92026:intron 50.0%
TCCCCACTAGTACGGTAAAG+GGG + chr3.2:37314815-37314834 None:intergenic 50.0%
TTCACTGAATGGTTGGGACC+AGG - chr3.2:37315667-37315686 MS.gene92026:CDS 50.0%
TTCAGTACCTTGTGTCTCGG+TGG - chr3.2:37317321-37317340 MS.gene92026:intron 50.0%
TTCCGGTGAAGAATGCACCA+TGG + chr3.2:37317487-37317506 None:intergenic 50.0%
TTGCTTCCCCTGCAAAGAAC+AGG + chr3.2:37317439-37317458 None:intergenic 50.0%
! CCTCTACCTCCCTCCTTTTT+AGG - chr3.2:37314291-37314310 MS.gene92026:intron 50.0%
! GCCCAGAAGGCATGTAAACA+AGG + chr3.2:37316851-37316870 None:intergenic 50.0%
! GGATTTGTTTCAGCCGGTGA+TGG - chr3.2:37317559-37317578 MS.gene92026:intron 50.0%
! GTGCAGCCTTGTGGAGATTA+AGG + chr3.2:37316818-37316837 None:intergenic 50.0%
! TGGTCACGGTCTTATGGTCA+GGG - chr3.2:37316380-37316399 MS.gene92026:intron 50.0%
!! GTTACCGGTGAGGAAGCATT+AGG + chr3.2:37316951-37316970 None:intergenic 50.0%
!! GTTTGGCTTTCCTGTTGACC+TGG - chr3.2:37314611-37314630 MS.gene92026:CDS 50.0%
!! TGACAGGAAGTACTTCTCCC+TGG - chr3.2:37316357-37316376 MS.gene92026:intron 50.0%
!!! TTTTGGGGTGCCAACGTAGT+TGG - chr3.2:37315198-37315217 MS.gene92026:intron 50.0%
AAGGACAAGAAGGTGGGGCA+GGG + chr3.2:37315749-37315768 None:intergenic 55.0%
ACCATAAGACCGTGACCACC+AGG + chr3.2:37316378-37316397 None:intergenic 55.0%
AGATTGCAGGATGCGTGTGC+TGG - chr3.2:37317520-37317539 MS.gene92026:intron 55.0%
AGCTGCCATCGCTGAACTTG+GGG - chr3.2:37316689-37316708 MS.gene92026:CDS 55.0%
ATGCGTGTGCTGGAGCGATA+TGG - chr3.2:37317530-37317549 MS.gene92026:intron 55.0%
ATGGCAGCTTCCTTCCAGTC+TGG + chr3.2:37316678-37316697 None:intergenic 55.0%
CACTTGCTTCCGTGATTGGG+AGG - chr3.2:37314780-37314799 MS.gene92026:intron 55.0%
CAGGACATGTCCATACAGCG+TGG - chr3.2:37315435-37315454 MS.gene92026:intron 55.0%
CAGTACCTTGTGTCTCGGTG+GGG - chr3.2:37317323-37317342 MS.gene92026:intron 55.0%
CATGATGCTCCCAGGTCAAC+AGG + chr3.2:37314624-37314643 None:intergenic 55.0%
CCATAAGACCGTGACCACCA+GGG + chr3.2:37316377-37316396 None:intergenic 55.0%
CTCCCAATCACGGAAGCAAG+TGG + chr3.2:37314782-37314801 None:intergenic 55.0%
GAAGCCATCTCTCCCATCAC+CGG + chr3.2:37317575-37317594 None:intergenic 55.0%
GAAGCTGCCATCGCTGAACT+TGG - chr3.2:37316687-37316706 MS.gene92026:CDS 55.0%
GGATGGGAATCAAGTTCCCC+AGG - chr3.2:37315072-37315091 MS.gene92026:intron 55.0%
GTACTTCTCCCTGGTGGTCA+CGG - chr3.2:37316366-37316385 MS.gene92026:intron 55.0%
GTAGCCTGTGGTCCATGATG+AGG - chr3.2:37314377-37314396 MS.gene92026:CDS 55.0%
GTGAGGCCTAAAGGTAGGTG+AGG + chr3.2:37317204-37317223 None:intergenic 55.0%
TAACCCCAGCCTCCCAATCA+CGG + chr3.2:37314792-37314811 None:intergenic 55.0%
TAAGGACAAGAAGGTGGGGC+AGG + chr3.2:37315750-37315769 None:intergenic 55.0%
TCCAACCCCAAGTTCAGCGA+TGG + chr3.2:37316697-37316716 None:intergenic 55.0%
TCCACCTCATCATGGACCAC+AGG + chr3.2:37314384-37314403 None:intergenic 55.0%
TGATTTCCACCCTTGCCTGC+AGG - chr3.2:37315564-37315583 MS.gene92026:intron 55.0%
TGGCAGCTTCCTTCCAGTCT+GGG + chr3.2:37316677-37316696 None:intergenic 55.0%
TTGAACCAAGGCTCCCAGAC+TGG - chr3.2:37316661-37316680 MS.gene92026:CDS 55.0%
! GGTCACGGTCTTATGGTCAG+GGG - chr3.2:37316381-37316400 MS.gene92026:intron 55.0%
! GTGGTCACGGTCTTATGGTC+AGG - chr3.2:37316379-37316398 MS.gene92026:intron 55.0%
!! CAGGAAGTACTTCTCCCTGG+TGG - chr3.2:37316360-37316379 MS.gene92026:intron 55.0%
!! CCGGTGAGGAAGCATTAGGA+AGG + chr3.2:37316947-37316966 None:intergenic 55.0%
!! CTGTTGACCTGGGAGCATCA+TGG - chr3.2:37314622-37314641 MS.gene92026:CDS 55.0%
!! TGATGGCGGCTGAAGATTGC+AGG - chr3.2:37317507-37317526 MS.gene92026:intron 55.0%
ACCAAGGCTCCCAGACTGGA+AGG - chr3.2:37316665-37316684 MS.gene92026:CDS 60.0%
AGGACAAGAAGGTGGGGCAG+GGG + chr3.2:37315748-37315767 None:intergenic 60.0%
CCCTGGTGGTCACGGTCTTA+TGG - chr3.2:37316374-37316393 MS.gene92026:intron 60.0%
CTTCCGTGATTGGGAGGCTG+GGG - chr3.2:37314786-37314805 MS.gene92026:intron 60.0%
GCCATCGCTGAACTTGGGGT+TGG - chr3.2:37316693-37316712 MS.gene92026:CDS 60.0%
GCCTGTGGTCCATGATGAGG+TGG - chr3.2:37314380-37314399 MS.gene92026:CDS 60.0%
GCTGGAGCGATATGGAGAGC+TGG - chr3.2:37317538-37317557 MS.gene92026:intron 60.0%
GCTTCCGTGATTGGGAGGCT+GGG - chr3.2:37314785-37314804 MS.gene92026:intron 60.0%
GTTGGAGGGGCTTGCCCATA+AGG - chr3.2:37315586-37315605 MS.gene92026:intron 60.0%
TCCTTCCAGTCTGGGAGCCT+TGG + chr3.2:37316669-37316688 None:intergenic 60.0%
TCTTTGGCAAGCCGCCCAGA+AGG + chr3.2:37316864-37316883 None:intergenic 60.0%
TGCTTCCGTGATTGGGAGGC+TGG - chr3.2:37314784-37314803 MS.gene92026:intron 60.0%
TTCCACCCTTGCCTGCAGGT+TGG - chr3.2:37315568-37315587 MS.gene92026:intron 60.0%
! ACCCTTGCCTGCAGGTTGGA+GGG - chr3.2:37315572-37315591 MS.gene92026:intron 60.0%
!! TCAGCCGGTGATGGGAGAGA+TGG - chr3.2:37317568-37317587 MS.gene92026:intron 60.0%
ACAAGAAGGTGGGGCAGGGG+GGG + chr3.2:37315745-37315764 None:intergenic 65.0%
CAGGGTGACGTGCAGCCTTG+TGG + chr3.2:37316827-37316846 None:intergenic 65.0%
CCCCTCCAACCTGCAGGCAA+GGG + chr3.2:37315576-37315595 None:intergenic 65.0%
CCTTGTGTCTCGGTGGGGCT+CGG - chr3.2:37317328-37317347 MS.gene92026:intron 65.0%
CTCCAACCTGCAGGCAAGGG+TGG + chr3.2:37315573-37315592 None:intergenic 65.0%
GACAAGAAGGTGGGGCAGGG+GGG + chr3.2:37315746-37315765 None:intergenic 65.0%
GGACAAGAAGGTGGGGCAGG+GGG + chr3.2:37315747-37315766 None:intergenic 65.0%
! CACCCTTGCCTGCAGGTTGG+AGG - chr3.2:37315571-37315590 MS.gene92026:intron 65.0%
! CCCTTGCCTGCAGGTTGGAG+GGG - chr3.2:37315573-37315592 MS.gene92026:intron 65.0%
CCGAGCCCCACCGAGACACA+AGG + chr3.2:37317331-37317350 None:intergenic 70.0%
GCCCCTCCAACCTGCAGGCA+AGG + chr3.2:37315577-37315596 None:intergenic 70.0%
GGCAAGCCCCTCCAACCTGC+AGG + chr3.2:37315582-37315601 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 37313654 37317628 37313654 ID=MS.gene92026
chr3.2 mRNA 37313654 37317628 37313654 ID=MS.gene92026.t1;Parent=MS.gene92026
chr3.2 exon 37317581 37317628 37317581 ID=MS.gene92026.t1.exon1;Parent=MS.gene92026.t1
chr3.2 CDS 37317581 37317628 37317581 ID=cds.MS.gene92026.t1;Parent=MS.gene92026.t1
chr3.2 exon 37316639 37316727 37316639 ID=MS.gene92026.t1.exon2;Parent=MS.gene92026.t1
chr3.2 CDS 37316639 37316727 37316639 ID=cds.MS.gene92026.t1;Parent=MS.gene92026.t1
chr3.2 exon 37316415 37316528 37316415 ID=MS.gene92026.t1.exon3;Parent=MS.gene92026.t1
chr3.2 CDS 37316415 37316528 37316415 ID=cds.MS.gene92026.t1;Parent=MS.gene92026.t1
chr3.2 exon 37316141 37316228 37316141 ID=MS.gene92026.t1.exon4;Parent=MS.gene92026.t1
chr3.2 CDS 37316141 37316228 37316141 ID=cds.MS.gene92026.t1;Parent=MS.gene92026.t1
chr3.2 exon 37315789 37315874 37315789 ID=MS.gene92026.t1.exon5;Parent=MS.gene92026.t1
chr3.2 CDS 37315789 37315874 37315789 ID=cds.MS.gene92026.t1;Parent=MS.gene92026.t1
chr3.2 exon 37315594 37315696 37315594 ID=MS.gene92026.t1.exon6;Parent=MS.gene92026.t1
chr3.2 CDS 37315594 37315696 37315594 ID=cds.MS.gene92026.t1;Parent=MS.gene92026.t1
chr3.2 exon 37314822 37314919 37314822 ID=MS.gene92026.t1.exon7;Parent=MS.gene92026.t1
chr3.2 CDS 37314822 37314919 37314822 ID=cds.MS.gene92026.t1;Parent=MS.gene92026.t1
chr3.2 exon 37314317 37314746 37314317 ID=MS.gene92026.t1.exon8;Parent=MS.gene92026.t1
chr3.2 CDS 37314317 37314746 37314317 ID=cds.MS.gene92026.t1;Parent=MS.gene92026.t1
chr3.2 exon 37313654 37313962 37313654 ID=MS.gene92026.t1.exon9;Parent=MS.gene92026.t1
chr3.2 CDS 37313654 37313962 37313654 ID=cds.MS.gene92026.t1;Parent=MS.gene92026.t1
Gene Sequence

>MS.gene92026

ATGGCTGGGATTGCTGCTGCACGTGCACTTCAAGATGCTTCCTTTCAGGTATTTGACCTCAATATTTTGATTTATGAGCTCAAACAATCGACAGTCGTTGTTGAAGTAGAAGTTAGTATGTTACTGCTATAAAACAATGATTTATTTCTTGTGAATGCTTACATGATTGCAATTATCCGTTAATGGGATTGTCTGAATGAATTTTTACCCTCTATCTTCTAATCGAGATCTTTCATGAAACAAATCTAATTATATTTGTAAAATGGTGGAAATCTGGTTTAGAGTTTACAAAGAATTTGATGTGGGTGATGCTTGCTAGTTTAGATTTGGGGTTACGTTTCACTTTAGTCGAGTAAAACTATAGCTCTTAAAGGGATTCAAGAATGCATGCAATAATTGAATTTATGCTATATGTTACCCTTTTTTATTTCGTATTTTTCTGATTTTCCTTGTATTTATTTTTATGAACCCGACAGTAATTCATGTGTTTGCCCCAATGTTGGCAATGTAATATGTAACTAACAATAACATATACCTCAGTATATTGTGTTACTGTGATGCTTCTTGTTTGAAGCTTGAACTTTCACACTTAACAAATGAATAGAAGCTGTTTTTTTGTTTTGTTTTTCTGCTTTATCCTCTACCTCCCTCCTTTTTAGGAATCATGCACAGCATTGTGCTACTGAGTCGTTTCTTATTTAATAACTGGATATACATATTTTTGTAGCCTGTGGTCCATGATGAGGTGGAAATATAATTAAAAATAAATAAAATCAAGCAAAGCTTTGTGTTTCCTATTATTTGAAACTTGGAGCTGCATTTTTGTAACCTGCAATCAATTAATATGCATTTTCAGAGTCTAGGGACTAAATAGCGCTTTGTTTTTTAATTTTTTGGTCAGGTTGTTCTCTTAGAGTCTAGGGAAAGACTTGGTGGCCGAATTCACACTGATTACTCGTTTGGCTTTCCTGTTGACCTGGGAGCATCATGGTAAAGCTTATTCTCTTCATATTCTGATGTATTTGAATGTTGATGAGAATGTGCATTTTTTTGTCTCCATTTATTTTCTTATTAAAAGGAACACTTTTTTCCTGTTTAAGGTTGCATGGAGTTTGCAAGGAGAATCCACTTGCTTCCGTGATTGGGAGGCTGGGGTTACCCCTTTACCGTACTAGTGGGGATAACTCTGTGCTATACGACCATGATTTGGAAAGGTATGTATGTACTTAAGTTATATATTAGTTTGCAAATTCTGCCACACTTGCATAGTAGATAACATTTTTAATTGTTTTTTGCAACCAACTAAAATTTCAATTTTTTTTCCTTTTTCTAGTTTTATCCGACGTAGAAGGTATTATATGTTAGTTCTTTTTGAATTGAAATTCATTACCTTATTCCAGCTATGCACTTTATGATAAGGATGGGAATCAAGTTCCCCAGGAATTGGTAACAAAAGTTGGTGAAGTATTTGAAACTATTTTACTGGAGGTAAGTCATTTTCTTATTTAGTCTTGTTATTTGGTTTACTACAAATGATTGTTAGGTTTTGGGGTGCCAACGTAGTTGGATTCCTCTACCTTATAGTGATGCCTTTGCACTACATTTCTGGTTTGATAATAAAAAAGGCTATTTGGTTTACCTGCTATGCATTTCCACAGTAAAAATATTTTTTTCCAAATCATCTCTTCTAATGTTTGATTCTACTTATTGTCATTGTGAGAAACCTTTGAAATTTTGTCCTTGGTTAAATGCAGACGAATAAAGTAAGAAGTGAATTCAATCAGGACATGTCCATACAGCGTGGTCTTTCAATTGTTTTTGAAAGGAATCCAGAATTAAGGTTATTATTGGCATATAATAAAATTTCACCGAGACCGTGATTGTTTTCTTTAAGCGGTAGTACAGTAATATGATTTCCACCCTTGCCTGCAGGTTGGAGGGGCTTGCCCATAAGGTACTTCAGTGGTATTTATGCAGAATGGAGGGCTGGTTTGCTGCTGATTCTGATACAATTTCACTGAATGGTTGGGACCAGGTAATTTAAAGAAATCAACTTGAAGATGTTACTCTTGTATTAGCTGTTAAGTTCCCCCCCTGCCCCACCTTCTTGTCCTTAATTTACACACTAAATGATTTACTCTCTTTCGTGTTACATACAGGTAGCTCCTGTAGTGAAAGATATAATTTGTAAAGTCGTCTCATAGCCAGGTGCATGAGTCTTCAACATGCAGCCTTTCTATGACCGATAATCATGTAAATGTGTTTACTGATCTATAAATAGGAGTATGCATCTCGTTGAAACATAGAGAGACCAGGTTAGGGGATAAAAATGGACCATTGTGTTGTTATGCATGTAAAACTTTCGAGAAACGAGTAAGTCAAACATGTGTAAATTTCATCATGTAGAATCAAACAAATCCAGATGGGAAGGGTGTAAAAGATTCCTTTCATGACAGGTCATTTTGTTGCATGATTGTGAAATGCTGTGAAATCAGTATTATGGCTGTAGGGTTTTCAGTTTAATGAAAACAGTTCTTCCCTTTGCATAGACCTGCCATGAAGAACATTAGAAAATACTGCATATTAAAACTAAGTTGACCTTTAAAACTAACTTGACCTAGTTTTACCCTAATTACAGCATATTGCAAACATTTTTCTTTTGAGCATATCTTGTTTTCAGATCTCATACCTCTGAATATATTTTGACAGGAAGTACTTCTCCCTGGTGGTCACGGTCTTATGGTCAGGGGCTACTTGCCTGTTATAAATACCCTAGCCAAGGGTCTTGATATTCGCCTAGGACACAGGTAGATATAGTTTGAATTGTTGTTTTGATATTGTATGTCCTGTTATGTTTCTTAATTAAACTAACCTCTTTTCAGAGTCACAAAAGTTGTTCGGAGATATAATGGAGTAAAAGTGACCGTGGAAAGTGGGAAAACATTTATTGCTGATGCGGCTATTGTTGCTGTCCCTCTTGGTGTACTTAAAGCAAAGAGGATATCATTTGAACCAAGGCTCCCAGACTGGAAGGAAGCTGCCATCGCTGAACTTGGGGTTGGACTTGAGAACAAAATTATTCTACATTTTGAGAATGTATTTTGGCCTAATGTAGAGTTCTTAGGAGTAGTTGCAGATACATCTTATGGATGTAGCTACTTCCTTAATCTCCACAAGGCTGCACGTCACCCTGTCCTTGTTTACATGCCTTCTGGGCGGCTTGCCAAAGACATTGAAAAAATGTCTGATGAAGCAGCTGCTGACTTTGCTTTTGTACAGCTCAAGAAGATCCTTCCTAATGCTTCCTCACCGGTAACCACTCTATTTTTACTTATTTCAGTTTTTAATCGCGCTAGGAAAATTTCGTTTCAATACTCATTCAGTTATCAGTCCAAACATAAGATTAGATAAGTCTTTATTGTAGGCCTCTAGTTCACCCTGCTCAGTTCACTATAATCTACACAGGCCACTAGTTCTATGGAACCATATTCATATTGATACTACAAAAATGCACACATTCTGCTCTATTAATTGTTCACTATGAAAACCTCACCTACCTTTAGGCCTCACATTTCTTTGGGCTGACCCTTTACTGTGTATGCTATGAGGCTTTAATTTAGTTAATTTATGGCCTATGTATTTTAATTATTTGTCTTTACCATGCAGATTCAGTACCTTGTGTCTCGGTGGGGCTCGGATATAAATTCACTGGGATCATATAGCTATGATCAAGTAGGGAAACCACATGAACTGTACGAAAGGCTACGAGTCCCAGTAGATAACCTGTTCTTTGCAGGGGAAGCAACAAGTATGAGCTATCCAGGATCTGTCCATGGTGCATTCTTCACCGGAATGATGGCGGCTGAAGATTGCAGGATGCGTGTGCTGGAGCGATATGGAGAGCTGGATTTGTTTCAGCCGGTGATGGGAGAGATGGCTTCCTTGACTATCCCACTTCAGATATCTCGTATGTAA
Protein sequence

>MS.gene92026.t1

MAGIAAARALQDASFQVVLLESRERLGGRIHTDYSFGFPVDLGASWLHGVCKENPLASVIGRLGLPLYRTSGDNSVLYDHDLESYALYDKDGNQVPQELVTKVGEVFETILLETNKVRSEFNQDMSIQRGLSIVFERNPELRLEGLAHKVLQWYLCRMEGWFAADSDTISLNGWDQEVLLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKVVRRYNGVKVTVESGKTFIADAAIVAVPLGVLKAKRISFEPRLPDWKEAAIAELGVGLENKIILHFENVFWPNVEFLGVVADTSYGCSYFLNLHKAARHPVLVYMPSGRLAKDIEKMSDEAAADFAFVQLKKILPNASSPIQYLVSRWGSDINSLGSYSYDQVGKPHELYERLRVPVDNLFFAGEATSMSYPGSVHGAFFTGMMAAEDCRMRVLERYGELDLFQPVMGEMASLTIPLQISRM