Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008424.t1 | XP_003600559.1 | 95.8 | 403 | 17 | 0 | 1 | 403 | 1 | 403 | 7.10E-211 | 743 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008424.t1 | Q10PP8 | 72.5 | 404 | 100 | 3 | 1 | 402 | 1 | 395 | 1.4e-159 | 563.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008424.t1 | G7IV59 | 95.8 | 403 | 17 | 0 | 1 | 403 | 1 | 403 | 5.1e-211 | 743.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene068947 | MS.gene008424 | PPI |
| MS.gene061402 | MS.gene008424 | PPI |
| MS.gene008424 | MS.gene92476 | PPI |
| MS.gene045727 | MS.gene008424 | PPI |
| MS.gene008424 | MS.gene42745 | PPI |
| MS.gene032465 | MS.gene008424 | PPI |
| MS.gene98420 | MS.gene008424 | PPI |
| MS.gene36106 | MS.gene008424 | PPI |
| MS.gene62500 | MS.gene008424 | PPI |
| MS.gene008424 | MS.gene069718 | PPI |
| MS.gene008424 | MS.gene038979 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008424.t1 | MTR_3g062610 | 98.015 | 403 | 8 | 0 | 1 | 403 | 1 | 403 | 0.0 | 815 |
| MS.gene008424.t1 | MTR_5g075680 | 75.062 | 405 | 88 | 4 | 1 | 402 | 1 | 395 | 0.0 | 624 |
| MS.gene008424.t1 | MTR_3g062610 | 98.007 | 301 | 6 | 0 | 1 | 301 | 1 | 301 | 0.0 | 608 |
| MS.gene008424.t1 | MTR_5g075680 | 80.838 | 334 | 64 | 0 | 69 | 402 | 9 | 342 | 0.0 | 578 |
| MS.gene008424.t1 | MTR_5g075680 | 71.711 | 304 | 73 | 4 | 1 | 301 | 1 | 294 | 6.05e-155 | 440 |
| MS.gene008424.t1 | MTR_7g022890 | 57.143 | 336 | 135 | 3 | 68 | 394 | 8 | 343 | 2.46e-126 | 368 |
| MS.gene008424.t1 | MTR_7g022890 | 57.927 | 328 | 133 | 2 | 72 | 394 | 69 | 396 | 1.23e-125 | 369 |
| MS.gene008424.t1 | MTR_8g046550 | 55.287 | 331 | 141 | 4 | 72 | 396 | 64 | 393 | 7.17e-122 | 358 |
| MS.gene008424.t1 | MTR_2g064405 | 56.098 | 328 | 137 | 4 | 72 | 393 | 63 | 389 | 2.95e-120 | 355 |
| MS.gene008424.t1 | MTR_2g064405 | 58.333 | 300 | 122 | 3 | 96 | 393 | 14 | 312 | 7.80e-117 | 343 |
| MS.gene008424.t1 | MTR_5g075680 | 67.717 | 254 | 69 | 4 | 1 | 251 | 1 | 244 | 1.26e-116 | 340 |
| MS.gene008424.t1 | MTR_3g080090 | 51.558 | 353 | 161 | 5 | 53 | 397 | 49 | 399 | 2.88e-115 | 342 |
| MS.gene008424.t1 | MTR_3g081690 | 81.395 | 43 | 8 | 0 | 149 | 191 | 1 | 43 | 1.92e-15 | 77.4 |
| MS.gene008424.t1 | MTR_3g082050 | 81.395 | 43 | 8 | 0 | 149 | 191 | 1 | 43 | 2.55e-15 | 77.4 |
| MS.gene008424.t1 | MTR_3g082050 | 81.395 | 43 | 8 | 0 | 149 | 191 | 1 | 43 | 2.68e-15 | 77.0 |
| MS.gene008424.t1 | MTR_1g088870 | 21.725 | 313 | 213 | 6 | 106 | 389 | 74 | 383 | 1.56e-14 | 75.5 |
| MS.gene008424.t1 | MTR_1g088870 | 21.725 | 313 | 213 | 6 | 106 | 389 | 74 | 383 | 2.90e-14 | 74.7 |
| MS.gene008424.t1 | MTR_1g088870 | 21.630 | 319 | 211 | 7 | 106 | 388 | 74 | 389 | 7.42e-14 | 72.8 |
| MS.gene008424.t1 | MTR_1g088870 | 21.429 | 308 | 210 | 6 | 106 | 384 | 74 | 378 | 3.56e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008424.t1 | AT3G58060 | 71.040 | 404 | 107 | 4 | 9 | 402 | 7 | 410 | 0.0 | 571 |
| MS.gene008424.t1 | AT3G58060 | 71.040 | 404 | 107 | 4 | 9 | 402 | 7 | 410 | 0.0 | 571 |
| MS.gene008424.t1 | AT1G79520 | 57.927 | 328 | 131 | 4 | 72 | 393 | 19 | 345 | 5.01e-123 | 360 |
| MS.gene008424.t1 | AT1G79520 | 57.927 | 328 | 131 | 4 | 72 | 393 | 19 | 345 | 5.01e-123 | 360 |
| MS.gene008424.t1 | AT1G79520 | 57.927 | 328 | 131 | 4 | 72 | 393 | 72 | 398 | 2.92e-122 | 360 |
| MS.gene008424.t1 | AT1G79520 | 57.927 | 328 | 131 | 4 | 72 | 393 | 84 | 410 | 3.51e-122 | 360 |
| MS.gene008424.t1 | AT1G16310 | 57.317 | 328 | 133 | 4 | 72 | 393 | 99 | 425 | 3.78e-120 | 355 |
| MS.gene008424.t1 | AT1G16310 | 59.732 | 298 | 117 | 3 | 98 | 393 | 16 | 312 | 5.70e-117 | 343 |
| MS.gene008424.t1 | AT2G39450 | 53.221 | 357 | 151 | 4 | 43 | 394 | 45 | 390 | 8.22e-107 | 320 |
| MS.gene008424.t1 | AT2G47830 | 21.752 | 331 | 225 | 10 | 100 | 401 | 61 | 386 | 4.22e-13 | 71.2 |
Find 88 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTCTCTGCTTGATCTAA+TGG | 0.267065 | 3.3:-56866446 | MS.gene008424:CDS |
| GACAAACATGGACGGGAATT+CGG | 0.295168 | 3.3:-56869024 | None:intergenic |
| CAATTTACACCATCACAAAT+TGG | 0.338308 | 3.3:-56865297 | MS.gene008424:CDS |
| AGGCAAGAACGGACTTTATC+AGG | 0.338863 | 3.3:+56868891 | None:intergenic |
| AGCTGACATATCTCGTTATA+AGG | 0.345237 | 3.3:-56864951 | MS.gene008424:CDS |
| TGACATCTGAACAACTAATA+TGG | 0.350001 | 3.3:-56865602 | MS.gene008424:CDS |
| GGATTAGTTGCGGCTATTCT+TGG | 0.352670 | 3.3:-56865367 | MS.gene008424:CDS |
| ACAAACATGGACGGGAATTC+GGG | 0.367813 | 3.3:-56869023 | None:intergenic |
| ACAAATCATTCGCCGGAATT+CGG | 0.374346 | 3.3:-56868949 | MS.gene008424:CDS |
| GTGTCAACACGTTGAATTCC+GGG | 0.384340 | 3.3:+56864925 | None:intergenic |
| GTCAGCTTCTGCAAAACTTC+AGG | 0.391576 | 3.3:+56864967 | None:intergenic |
| ACCTTCCTTTACAGTTTCAT+TGG | 0.399639 | 3.3:-56865007 | MS.gene008424:intron |
| ACTGAAATCGTTTGAGGAAG+TGG | 0.414318 | 3.3:-56868555 | MS.gene008424:CDS |
| ACGAATGCCCTCTCAACTTC+CGG | 0.416341 | 3.3:+56864279 | None:intergenic |
| TAAAAGAAGCACATGCCATT+GGG | 0.420081 | 3.3:-56864332 | MS.gene008424:CDS |
| TGCTACACTGAAATCGTTTG+AGG | 0.426036 | 3.3:-56868561 | MS.gene008424:CDS |
| AGTGTCAACACGTTGAATTC+CGG | 0.426219 | 3.3:+56864924 | None:intergenic |
| TGAGAGAGTTAACCGAATTC+CGG | 0.436260 | 3.3:+56868937 | None:intergenic |
| AATAAAGCTTGAGAAACTTC+CGG | 0.440596 | 3.3:-56864298 | MS.gene008424:CDS |
| AAAACGTGCTTACGTATTGT+TGG | 0.457947 | 3.3:+56864200 | None:intergenic |
| AAACGTGCTTACGTATTGTT+GGG | 0.479253 | 3.3:+56864201 | None:intergenic |
| CATGGACGGGAATTCGGGTT+CGG | 0.485567 | 3.3:-56869018 | MS.gene008424:CDS |
| TGTGCTCCGACCGTCGTGTA+TGG | 0.486612 | 3.3:+56868971 | None:intergenic |
| AGAAACTTCCGGAAGTTGAG+AGG | 0.491863 | 3.3:-56864287 | MS.gene008424:CDS |
| CTGCACCCTCAGCTTTCCGA+TGG | 0.492289 | 3.3:+56866363 | None:intergenic |
| TCCTTTACAGTTTCATTGGT+GGG | 0.493930 | 3.3:-56865003 | MS.gene008424:intron |
| GATGTGGTAACAAATGTAGT+TGG | 0.494730 | 3.3:-56865388 | MS.gene008424:CDS |
| TTGGAGAGATCAACATCAAA+AGG | 0.496185 | 3.3:+56868855 | None:intergenic |
| TTCCTTTACAGTTTCATTGG+TGG | 0.497731 | 3.3:-56865004 | MS.gene008424:intron |
| ACTGTCCGTGCATATACATT+TGG | 0.506933 | 3.3:-56864904 | MS.gene008424:CDS |
| TTACTGAGAACTGAGTGCTC+TGG | 0.508821 | 3.3:+56864228 | None:intergenic |
| CTTAGTTGACAAACATGGAC+GGG | 0.514860 | 3.3:-56869031 | None:intergenic |
| GCCGCTGTCATGGCCACACT+TGG | 0.516267 | 3.3:-56866319 | MS.gene008424:intron |
| TTGGCTTAAAGCAGTGGCGT+TGG | 0.523129 | 3.3:+56868836 | None:intergenic |
| AAATTGGTCTCGCACTGTCA+TGG | 0.523148 | 3.3:-56865281 | MS.gene008424:CDS |
| CTGTGGTGAAGCTTATGCTC+TGG | 0.529681 | 3.3:-56865554 | MS.gene008424:CDS |
| TTAAAAGAAGCACATGCCAT+TGG | 0.531006 | 3.3:-56864333 | MS.gene008424:CDS |
| AGTTGATGCTGCAATAGCTA+TGG | 0.531279 | 3.3:+56866471 | None:intergenic |
| ATTCGGGTTCGGATCCTACC+AGG | 0.539177 | 3.3:-56869007 | MS.gene008424:CDS |
| TGAGGATGATAAAGAAGAGC+AGG | 0.542893 | 3.3:-56868504 | MS.gene008424:CDS |
| TGTAGACATATGCGACGGTA+AGG | 0.543306 | 3.3:-56866501 | MS.gene008424:intron |
| CAAAAGGAGACTCAGAATCA+AGG | 0.545229 | 3.3:+56868871 | None:intergenic |
| AAGCTGAGGGTGCAGCCAGT+AGG | 0.553499 | 3.3:-56866355 | MS.gene008424:CDS |
| TAATGGCTGGTGGTATACTC+TGG | 0.559053 | 3.3:-56866429 | MS.gene008424:CDS |
| TCTCTGCTTGATCTAATGGC+TGG | 0.562790 | 3.3:-56866442 | MS.gene008424:CDS |
| TATGGCGGAGAGAAGCGGCC+TGG | 0.567284 | 3.3:+56868989 | None:intergenic |
| CGCACTGTCATGGAAAATGC+CGG | 0.570182 | 3.3:-56865271 | MS.gene008424:intron |
| GCGGAGAGAAGCGGCCTGGT+AGG | 0.572201 | 3.3:+56868993 | None:intergenic |
| TGCACCCTCAGCTTTCCGAT+GGG | 0.578891 | 3.3:+56866364 | None:intergenic |
| AAATGTAGTTGGATTAGTTG+CGG | 0.581893 | 3.3:-56865377 | MS.gene008424:CDS |
| GCAAGCAAAATAGCTCCTAT+CGG | 0.587887 | 3.3:+56865319 | None:intergenic |
| AACGCCACTGCTTTAAGCCA+AGG | 0.589496 | 3.3:-56868834 | MS.gene008424:intron |
| AGCTTCTGCAAAACTTCAGG+AGG | 0.593060 | 3.3:+56864970 | None:intergenic |
| CAAATTTGACTCACCAAGTG+TGG | 0.593321 | 3.3:+56866306 | None:intergenic |
| CTGCTTGATCTAATGGCTGG+TGG | 0.593383 | 3.3:-56866439 | MS.gene008424:CDS |
| TCGTGTATGGCGGAGAGAAG+CGG | 0.595818 | 3.3:+56868984 | None:intergenic |
| GAAACTTCCGGAAGTTGAGA+GGG | 0.597194 | 3.3:-56864286 | MS.gene008424:CDS |
| AAACACCAAATGTATATGCA+CGG | 0.607538 | 3.3:+56864899 | None:intergenic |
| CACTTACATCTGCATAGGCA+CGG | 0.608948 | 3.3:+56865499 | None:intergenic |
| TATTTGTAAAGTCTCCCCAA+TGG | 0.612851 | 3.3:+56864317 | None:intergenic |
| GCTCCGACCGTCGTGTATGG+CGG | 0.618205 | 3.3:+56868974 | None:intergenic |
| CCTTAGTTGACAAACATGGA+CGG | 0.618437 | 3.3:-56869032 | None:intergenic |
| GGAGCACACAAATCATTCGC+CGG | 0.624667 | 3.3:-56868956 | MS.gene008424:CDS |
| CATTTGTTACCACATCAAAG+TGG | 0.624735 | 3.3:+56865395 | None:intergenic |
| AGGGACACTTACATCTGCAT+AGG | 0.625017 | 3.3:+56865494 | None:intergenic |
| ACATATGCGACGGTAAGGAG+TGG | 0.627570 | 3.3:-56866496 | MS.gene008424:CDS |
| ACTCAGAATCAAGGCAAGAA+CGG | 0.628154 | 3.3:+56868880 | None:intergenic |
| ACGGACTTTATCAGGAAGTG+TGG | 0.628556 | 3.3:+56868899 | None:intergenic |
| AATATCTATCAGTATCCCAT+CGG | 0.631874 | 3.3:-56866379 | MS.gene008424:CDS |
| TGAGGAAGTGGATGCTGTGG+TGG | 0.631977 | 3.3:-56868543 | MS.gene008424:CDS |
| TACTGGTGGATTGATCCGAT+AGG | 0.635998 | 3.3:-56865334 | MS.gene008424:CDS |
| ACCAAGTGTGGCCATGACAG+CGG | 0.639848 | 3.3:+56866318 | None:intergenic |
| CATACCTTGGCTTAAAGCAG+TGG | 0.640046 | 3.3:+56868830 | None:intergenic |
| TATCATGATATTTGCAACTG+TGG | 0.649353 | 3.3:-56865571 | MS.gene008424:CDS |
| TCTCCGCCATACACGACGGT+CGG | 0.650705 | 3.3:-56868977 | MS.gene008424:CDS |
| AGTATCCCATCGGAAAGCTG+AGG | 0.651250 | 3.3:-56866369 | MS.gene008424:CDS |
| AAAAGAAGCACATGCCATTG+GGG | 0.652246 | 3.3:-56864331 | MS.gene008424:CDS |
| GTATCCCATCGGAAAGCTGA+GGG | 0.659180 | 3.3:-56866368 | MS.gene008424:CDS |
| GCAGGATCACCACTTTGATG+TGG | 0.659988 | 3.3:-56865404 | MS.gene008424:intron |
| CTTTATCAGGAAGTGTGGAG+AGG | 0.665062 | 3.3:+56868904 | None:intergenic |
| CTTCTCTCCGCCATACACGA+CGG | 0.675085 | 3.3:-56868981 | MS.gene008424:CDS |
| GGTAGACATTGAACTGCCAG+AGG | 0.681640 | 3.3:-56864364 | MS.gene008424:CDS |
| GGAATCTGACTGCATTGATG+AGG | 0.683331 | 3.3:-56868522 | MS.gene008424:CDS |
| TGTCAACACGTTGAATTCCG+GGG | 0.703454 | 3.3:+56864926 | None:intergenic |
| TATCTCGTTATAAGGCACCC+CGG | 0.706272 | 3.3:-56864943 | MS.gene008424:CDS |
| GTTTGAGGAAGTGGATGCTG+TGG | 0.706705 | 3.3:-56868546 | MS.gene008424:CDS |
| AGTGCGAGACCAATTTGTGA+TGG | 0.710232 | 3.3:+56865288 | None:intergenic |
| TGATGTGTAGACATATGCGA+CGG | 0.793459 | 3.3:-56866506 | MS.gene008424:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCATTTACAATAAAAA+TGG | + | chr3.3:56867068-56867087 | None:intergenic | 10.0% |
| !!! | AATATTATTTTGTAATCAAA+AGG | - | chr3.3:56866645-56866664 | MS.gene008424:intron | 10.0% |
| !!! | AGTTAAATTTTATAAAAATC+AGG | + | chr3.3:56868462-56868481 | None:intergenic | 10.0% |
| !!! | ATATTATTTTGTAATCAAAA+GGG | - | chr3.3:56866646-56866665 | MS.gene008424:intron | 10.0% |
| !!! | GATTTTTATAAAATTTAACT+TGG | - | chr3.3:56868462-56868481 | MS.gene008424:CDS | 10.0% |
| !!! | TTAAGTTTTAAGAATAAATA+GGG | - | chr3.3:56865398-56865417 | MS.gene008424:CDS | 10.0% |
| !! | AATATTATTCTGTAATCAAA+AGG | - | chr3.3:56865510-56865529 | MS.gene008424:CDS | 15.0% |
| !! | ATAGTAGTTAATTATCTTTA+GGG | - | chr3.3:56866387-56866406 | MS.gene008424:CDS | 15.0% |
| !! | ATATTATTCTGTAATCAAAA+GGG | - | chr3.3:56865511-56865530 | MS.gene008424:CDS | 15.0% |
| !! | ATTGTAAATGAATTTCAATT+TGG | - | chr3.3:56867073-56867092 | MS.gene008424:intron | 15.0% |
| !! | TATAGTAGTTAATTATCTTT+AGG | - | chr3.3:56866386-56866405 | MS.gene008424:CDS | 15.0% |
| !! | TGATATAGAAGAATAAAATA+GGG | + | chr3.3:56865542-56865561 | None:intergenic | 15.0% |
| !!! | AAAGTTTATTGATTTTTGTT+TGG | - | chr3.3:56864982-56865001 | MS.gene008424:CDS | 15.0% |
| !!! | AAATTAATTTGATGAAATTG+TGG | - | chr3.3:56865123-56865142 | MS.gene008424:intron | 15.0% |
| !!! | ATTTTTAAACTAGAACTTTT+TGG | - | chr3.3:56865160-56865179 | MS.gene008424:intron | 15.0% |
| !!! | ATTTTTTGTTACTGTTATAA+AGG | - | chr3.3:56868527-56868546 | MS.gene008424:CDS | 15.0% |
| !!! | GTTAAGTTTTAAGAATAAAT+AGG | - | chr3.3:56865397-56865416 | MS.gene008424:CDS | 15.0% |
| !!! | GTTGAATAATTATTTTATGA+AGG | - | chr3.3:56864584-56864603 | MS.gene008424:intron | 15.0% |
| !!! | TAAGTTTTAAGAATAAATAG+GGG | - | chr3.3:56865399-56865418 | MS.gene008424:CDS | 15.0% |
| !!! | TATTGTTTTATTGATATTGA+AGG | - | chr3.3:56864785-56864804 | MS.gene008424:intron | 15.0% |
| !!! | TATTTTTGAGAAAAAAATAC+AGG | + | chr3.3:56866179-56866198 | None:intergenic | 15.0% |
| !!! | TTAATACTTTTTGACAATAT+TGG | - | chr3.3:56867490-56867509 | MS.gene008424:intron | 15.0% |
| !!! | TTTATTTGTTTTTGTTGAAA+AGG | - | chr3.3:56865225-56865244 | MS.gene008424:intron | 15.0% |
| !!! | TTTTAAAAATTTGTTCACAA+CGG | + | chr3.3:56867242-56867261 | None:intergenic | 15.0% |
| !! | AAGTATTCATTCAGATATTT+GGG | - | chr3.3:56867428-56867447 | MS.gene008424:intron | 20.0% |
| !! | ATAATTAATTAAGTCAGTAG+TGG | - | chr3.3:56865371-56865390 | MS.gene008424:CDS | 20.0% |
| !! | ATTTCACAGAATCAATTTAT+AGG | - | chr3.3:56868373-56868392 | MS.gene008424:intron | 20.0% |
| !! | CTGATATAGAAGAATAAAAT+AGG | + | chr3.3:56865543-56865562 | None:intergenic | 20.0% |
| !! | CTTCATTTATCCAAAAAAAA+TGG | - | chr3.3:56868421-56868440 | MS.gene008424:intron | 20.0% |
| !! | GTATGTTCAAAATGTAATAT+TGG | + | chr3.3:56868620-56868639 | None:intergenic | 20.0% |
| !! | TAATTAATTAAGTCAGTAGT+GGG | - | chr3.3:56865372-56865391 | MS.gene008424:CDS | 20.0% |
| !! | TAGTAGTTAATTATCTTTAG+GGG | - | chr3.3:56866388-56866407 | MS.gene008424:CDS | 20.0% |
| !! | TATCTTTGTGATATTATGTT+TGG | + | chr3.3:56868801-56868820 | None:intergenic | 20.0% |
| !! | TTACAATATGCATATATTCT+TGG | - | chr3.3:56868011-56868030 | MS.gene008424:intron | 20.0% |
| !!! | ATTTGGTGTTTTATATTTTG+TGG | - | chr3.3:56868339-56868358 | MS.gene008424:intron | 20.0% |
| !!! | GAAATTTTGTTTAGAATTAC+CGG | + | chr3.3:56867977-56867996 | None:intergenic | 20.0% |
| !!! | GTATTGATTCGTTTATAATT+GGG | - | chr3.3:56864956-56864975 | MS.gene008424:CDS | 20.0% |
| !!! | GTTTTCTATTAATTGCTTTA+CGG | + | chr3.3:56867588-56867607 | None:intergenic | 20.0% |
| !!! | TAGGATAATTTTCTTTTACT+AGG | - | chr3.3:56868716-56868735 | MS.gene008424:intron | 20.0% |
| !!! | TATTTTATGAAGGTGTTATA+AGG | - | chr3.3:56864594-56864613 | MS.gene008424:intron | 20.0% |
| !!! | TGTATTAAATTTCAAGTTTG+CGG | - | chr3.3:56864843-56864862 | MS.gene008424:intron | 20.0% |
| !!! | TGTATTGATTCGTTTATAAT+TGG | - | chr3.3:56864955-56864974 | MS.gene008424:CDS | 20.0% |
| !!! | TGTTGTATAACCATTTTTTT+TGG | + | chr3.3:56868434-56868453 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTCTATATCAGT+TGG | - | chr3.3:56865544-56865563 | MS.gene008424:CDS | 20.0% |
| !!! | TTTTCAGTTTAACTAAAGTT+TGG | - | chr3.3:56865095-56865114 | MS.gene008424:intron | 20.0% |
| ! | AAATGAACAATATACAAGCT+AGG | + | chr3.3:56866960-56866979 | None:intergenic | 25.0% |
| ! | ACAAACAAAGTATATGATCA+AGG | - | chr3.3:56866204-56866223 | MS.gene008424:intron | 25.0% |
| ! | AGTAGTTAATTATCTTTAGG+GGG | - | chr3.3:56866389-56866408 | MS.gene008424:CDS | 25.0% |
| ! | AGTAGTTAATTATGCAGTTA+TGG | - | chr3.3:56865327-56865346 | MS.gene008424:CDS | 25.0% |
| ! | AGTATTCATTCAGATATTTG+GGG | - | chr3.3:56867429-56867448 | MS.gene008424:intron | 25.0% |
| ! | ATGAAATTGTGGTTATAGAA+TGG | - | chr3.3:56865134-56865153 | MS.gene008424:intron | 25.0% |
| ! | GTTGAAAATTCTAATGTCTT+TGG | - | chr3.3:56867173-56867192 | MS.gene008424:intron | 25.0% |
| ! | TGCAATAAAGAAATGAGTAT+GGG | - | chr3.3:56866108-56866127 | MS.gene008424:intron | 25.0% |
| ! | TTCCTTAAACTCAGTAAATA+AGG | + | chr3.3:56867285-56867304 | None:intergenic | 25.0% |
| ! | TTGCAATAAAGAAATGAGTA+TGG | - | chr3.3:56866107-56866126 | MS.gene008424:intron | 25.0% |
| !! | AATTTTTGACATAGGACAAA+CGG | - | chr3.3:56865059-56865078 | MS.gene008424:intron | 25.0% |
| !! | ACATAATTAACTTTTGCTTC+CGG | - | chr3.3:56868061-56868080 | MS.gene008424:intron | 25.0% |
| !! | ATTTAAGACGTAAATGCAAT+TGG | - | chr3.3:56868128-56868147 | MS.gene008424:intron | 25.0% |
| !! | GAAGTATTCATTCAGATATT+TGG | - | chr3.3:56867427-56867446 | MS.gene008424:intron | 25.0% |
| !! | GTCATTATACTTCAAGTTAT+GGG | - | chr3.3:56866257-56866276 | MS.gene008424:intron | 25.0% |
| !! | TATCTTGTTATGACAAAGAT+AGG | - | chr3.3:56868697-56868716 | MS.gene008424:intron | 25.0% |
| !! | TGTCATTATACTTCAAGTTA+TGG | - | chr3.3:56866256-56866275 | MS.gene008424:intron | 25.0% |
| !! | TTAGTGCTAATTTTTGACAT+AGG | - | chr3.3:56865051-56865070 | MS.gene008424:intron | 25.0% |
| !!! | ATTTATTTGGCGTTTTAAAC+CGG | - | chr3.3:56865825-56865844 | MS.gene008424:intron | 25.0% |
| !!! | ATTTGAATTTGATTTTGAGC+AGG | - | chr3.3:56868841-56868860 | MS.gene008424:CDS | 25.0% |
| !!! | TTCTTGGTGATAAATTTTAC+TGG | - | chr3.3:56867875-56867894 | MS.gene008424:intron | 25.0% |
| AAACACCAAATGTATATGCA+CGG | + | chr3.3:56868330-56868349 | None:intergenic | 30.0% | |
| AAGAAAACATGTCAATATGC+AGG | - | chr3.3:56867804-56867823 | MS.gene008424:intron | 30.0% | |
| AATAAAGCTTGAGAAACTTC+CGG | - | chr3.3:56868928-56868947 | MS.gene008424:CDS | 30.0% | |
| AATAATATTGCAGAACTTCG+AGG | + | chr3.3:56865499-56865518 | None:intergenic | 30.0% | |
| AATATCTATCAGTATCCCAT+CGG | - | chr3.3:56866847-56866866 | MS.gene008424:intron | 30.0% | |
| AATGAATCACATGTGTAAGT+AGG | - | chr3.3:56864464-56864483 | MS.gene008424:intron | 30.0% | |
| ACTAGCAAATAAATGTTCCT+CGG | + | chr3.3:56867130-56867149 | None:intergenic | 30.0% | |
| ATAATATTGCAGAACTTCGA+GGG | + | chr3.3:56865498-56865517 | None:intergenic | 30.0% | |
| CAATTTACACCATCACAAAT+TGG | - | chr3.3:56867929-56867948 | MS.gene008424:intron | 30.0% | |
| GCAATAAAGAAATGAGTATG+GGG | - | chr3.3:56866109-56866128 | MS.gene008424:intron | 30.0% | |
| GTTAGTATCAGACACATATA+CGG | - | chr3.3:56864493-56864512 | MS.gene008424:intron | 30.0% | |
| TAAGGAAATCATTCAGCTAT+AGG | - | chr3.3:56867298-56867317 | MS.gene008424:intron | 30.0% | |
| TACATGAACATTAGTATGTG+AGG | + | chr3.3:56868757-56868776 | None:intergenic | 30.0% | |
| TATCATGATATTTGCAACTG+TGG | - | chr3.3:56867655-56867674 | MS.gene008424:intron | 30.0% | |
| TGAATCCAAACATATGAATC+TGG | + | chr3.3:56864872-56864891 | None:intergenic | 30.0% | |
| TGACATCTGAACAACTAATA+TGG | - | chr3.3:56867624-56867643 | MS.gene008424:intron | 30.0% | |
| TTATAAAGGAATGTGCGTAA+TGG | - | chr3.3:56868541-56868560 | MS.gene008424:CDS | 30.0% | |
| ! | CATTGAATCTATTTTGCTAC+AGG | - | chr3.3:56867542-56867561 | MS.gene008424:intron | 30.0% |
| ! | GTAGTTAATTATCTTTAGGG+GGG | - | chr3.3:56866390-56866409 | MS.gene008424:CDS | 30.0% |
| ! | GTCCTTATTTACTGAGTTTA+AGG | - | chr3.3:56867280-56867299 | MS.gene008424:intron | 30.0% |
| ! | TGGTGTTTTATATTTTGTGG+AGG | - | chr3.3:56868342-56868361 | MS.gene008424:intron | 30.0% |
| !! | AAATGTAGTTGGATTAGTTG+CGG | - | chr3.3:56867849-56867868 | MS.gene008424:intron | 30.0% |
| !! | TTGGTGATAAATTTTACTGG+TGG | - | chr3.3:56867878-56867897 | MS.gene008424:intron | 30.0% |
| !!! | TCTTTTTCCTTTGAGTTGAA+TGG | - | chr3.3:56867009-56867028 | MS.gene008424:intron | 30.0% |
| AACAGCATAAGGGCTATATA+CGG | + | chr3.3:56867215-56867234 | None:intergenic | 35.0% | |
| AAGAATAAATAGGGGAGAGA+AGG | - | chr3.3:56865407-56865426 | MS.gene008424:intron | 35.0% | |
| ACCAATGAAACTGTAAAGGA+AGG | + | chr3.3:56868223-56868242 | None:intergenic | 35.0% | |
| ACCTTCCTTTACAGTTTCAT+TGG | - | chr3.3:56868219-56868238 | MS.gene008424:intron | 35.0% | |
| ACTGACATTCAAAGCTAACT+AGG | + | chr3.3:56868670-56868689 | None:intergenic | 35.0% | |
| AGAATAAATAGGGGAGAGAA+GGG | - | chr3.3:56865408-56865427 | MS.gene008424:intron | 35.0% | |
| AGATTCTCTGCTTGATCTAA+TGG | - | chr3.3:56866780-56866799 | MS.gene008424:intron | 35.0% | |
| AGCTGACATATCTCGTTATA+AGG | - | chr3.3:56868275-56868294 | MS.gene008424:intron | 35.0% | |
| AGGTTTGGAAGATGTAGAAA+TGG | - | chr3.3:56865993-56866012 | MS.gene008424:intron | 35.0% | |
| ATACAGGATGATTGATGTCA+TGG | + | chr3.3:56866163-56866182 | None:intergenic | 35.0% | |
| CACAATAAGAGAAACCTAAC+TGG | + | chr3.3:56868569-56868588 | None:intergenic | 35.0% | |
| CACAATCATGACATGCATAT+GGG | + | chr3.3:56866046-56866065 | None:intergenic | 35.0% | |
| GATGTAATTTCAGAAGCAGT+GGG | + | chr3.3:56867468-56867487 | None:intergenic | 35.0% | |
| GATGTGGTAACAAATGTAGT+TGG | - | chr3.3:56867838-56867857 | MS.gene008424:intron | 35.0% | |
| GCAAAAACAATTATGCCTAC+TGG | + | chr3.3:56866889-56866908 | None:intergenic | 35.0% | |
| GGTTGAATTTATGTGTGCAT+AGG | - | chr3.3:56864615-56864634 | MS.gene008424:intron | 35.0% | |
| GGTTTGGAAGATGTAGAAAT+GGG | - | chr3.3:56865994-56866013 | MS.gene008424:intron | 35.0% | |
| GTTTGGAAGATGTAGAAATG+GGG | - | chr3.3:56865995-56866014 | MS.gene008424:intron | 35.0% | |
| TATAGGTTATAGCTGATGAC+AGG | - | chr3.3:56867315-56867334 | MS.gene008424:intron | 35.0% | |
| TATTTGTAAAGTCTCCCCAA+TGG | + | chr3.3:56868912-56868931 | None:intergenic | 35.0% | |
| TCATTCACCATTCAACTCAA+AGG | + | chr3.3:56867019-56867038 | None:intergenic | 35.0% | |
| TCCTTTACAGTTTCATTGGT+GGG | - | chr3.3:56868223-56868242 | MS.gene008424:intron | 35.0% | |
| TGATGTAATTTCAGAAGCAG+TGG | + | chr3.3:56867469-56867488 | None:intergenic | 35.0% | |
| TGTTCTCGCTTGCATTTATT+TGG | - | chr3.3:56865812-56865831 | MS.gene008424:intron | 35.0% | |
| TTATGATATCCTTCACCTTG+AGG | - | chr3.3:56866294-56866313 | MS.gene008424:intron | 35.0% | |
| TTCCTTTACAGTTTCATTGG+TGG | - | chr3.3:56868222-56868241 | MS.gene008424:intron | 35.0% | |
| TTGGAGAGATCAACATCAAA+AGG | + | chr3.3:56864374-56864393 | None:intergenic | 35.0% | |
| ! | ACTAGAACTTTTTGGATGCT+TGG | - | chr3.3:56865168-56865187 | MS.gene008424:intron | 35.0% |
| ! | ATCAGTTGGTTTCTATCAAC+TGG | - | chr3.3:56865558-56865577 | MS.gene008424:CDS | 35.0% |
| ! | ATCTGTCTTTTTGACCTTAC+CGG | + | chr3.3:56868083-56868102 | None:intergenic | 35.0% |
| ! | ATGGCATGTGCTTCTTTTAA+CGG | + | chr3.3:56868893-56868912 | None:intergenic | 35.0% |
| ! | ATTAACTTTTGCTTCCGGTA+AGG | - | chr3.3:56868066-56868085 | MS.gene008424:intron | 35.0% |
| ! | CATTTGTTACCACATCAAAG+TGG | + | chr3.3:56867834-56867853 | None:intergenic | 35.0% |
| ! | CTATTTTGCTACAGGTTTTC+AGG | - | chr3.3:56867550-56867569 | MS.gene008424:intron | 35.0% |
| ! | GAAACTGTAAAGGAAGGTAT+CGG | + | chr3.3:56868217-56868236 | None:intergenic | 35.0% |
| ! | TAAAAGAAGCACATGCCATT+GGG | - | chr3.3:56868894-56868913 | MS.gene008424:CDS | 35.0% |
| ! | TCAGATGTCATCTTTTCACT+AGG | + | chr3.3:56867614-56867633 | None:intergenic | 35.0% |
| ! | TCTTTTAACGGTAATTCCTC+TGG | + | chr3.3:56868881-56868900 | None:intergenic | 35.0% |
| ! | TTAAAAGAAGCACATGCCAT+TGG | - | chr3.3:56868893-56868912 | MS.gene008424:CDS | 35.0% |
| ! | TTAATTAAGTCAGTAGTGGG+AGG | - | chr3.3:56865375-56865394 | MS.gene008424:CDS | 35.0% |
| !!! | AGGTTTTCAGGTGTTATTCA+CGG | - | chr3.3:56867562-56867581 | MS.gene008424:intron | 35.0% |
| AAAGAGAGATACACCAGATG+AGG | - | chr3.3:56865696-56865715 | MS.gene008424:intron | 40.0% | |
| AAAGATTCACCTTGTCCTCA+AGG | + | chr3.3:56866312-56866331 | None:intergenic | 40.0% | |
| AACCACTCCAATTCAGTTTC+AGG | + | chr3.3:56865892-56865911 | None:intergenic | 40.0% | |
| AACCTGAAACTGAATTGGAG+TGG | - | chr3.3:56865887-56865906 | MS.gene008424:intron | 40.0% | |
| AAGCTCCATTTCTGCCATAA+CGG | + | chr3.3:56865614-56865633 | None:intergenic | 40.0% | |
| AATGGAACAGGAGAGCAAAA+CGG | - | chr3.3:56866068-56866087 | MS.gene008424:intron | 40.0% | |
| ACAAATCATTCGCCGGAATT+CGG | - | chr3.3:56864277-56864296 | MS.gene008424:CDS | 40.0% | |
| ACAACGGAATGAACAGCATA+AGG | + | chr3.3:56867226-56867245 | None:intergenic | 40.0% | |
| ACTCAGAATCAAGGCAAGAA+CGG | + | chr3.3:56864349-56864368 | None:intergenic | 40.0% | |
| ACTGAAATCGTTTGAGGAAG+TGG | - | chr3.3:56864671-56864690 | MS.gene008424:intron | 40.0% | |
| ACTGTCCGTGCATATACATT+TGG | - | chr3.3:56868322-56868341 | MS.gene008424:intron | 40.0% | |
| AGAGATAAGGGGAACTACTA+TGG | - | chr3.3:56866134-56866153 | MS.gene008424:intron | 40.0% | |
| AGAGGAACCTGAAACTGAAT+TGG | - | chr3.3:56865882-56865901 | MS.gene008424:intron | 40.0% | |
| AGGACAAGGTGAATCTTTAG+GGG | - | chr3.3:56866314-56866333 | MS.gene008424:intron | 40.0% | |
| AGTGTCAACACGTTGAATTC+CGG | + | chr3.3:56868305-56868324 | None:intergenic | 40.0% | |
| ATGGCAAAGAAGATGCATAC+TGG | - | chr3.3:56865644-56865663 | MS.gene008424:CDS | 40.0% | |
| CAAAAGGAGACTCAGAATCA+AGG | + | chr3.3:56864358-56864377 | None:intergenic | 40.0% | |
| CAAATTTGACTCACCAAGTG+TGG | + | chr3.3:56866923-56866942 | None:intergenic | 40.0% | |
| CAACGGAATGAACAGCATAA+GGG | + | chr3.3:56867225-56867244 | None:intergenic | 40.0% | |
| CATGATTGTGGAAATGGAAC+AGG | - | chr3.3:56866056-56866075 | MS.gene008424:intron | 40.0% | |
| CCACAATCATGACATGCATA+TGG | + | chr3.3:56866047-56866066 | None:intergenic | 40.0% | |
| CCATATGCATGTCATGATTG+TGG | - | chr3.3:56866044-56866063 | MS.gene008424:intron | 40.0% | |
| CTCTTGTCTAAGTATCTGAC+TGG | - | chr3.3:56867151-56867170 | MS.gene008424:intron | 40.0% | |
| GAAGCAAACATCAGAAGAGA+GGG | + | chr3.3:56867754-56867773 | None:intergenic | 40.0% | |
| GAGATAAGGGGAACTACTAT+GGG | - | chr3.3:56866135-56866154 | MS.gene008424:intron | 40.0% | |
| GAGGACAAGGTGAATCTTTA+GGG | - | chr3.3:56866313-56866332 | MS.gene008424:intron | 40.0% | |
| GATAGGAGAAGAGAAAGGTT+TGG | - | chr3.3:56865978-56865997 | MS.gene008424:intron | 40.0% | |
| GATATCATAAGTGTCCACCT+GGG | + | chr3.3:56866284-56866303 | None:intergenic | 40.0% | |
| GCAAGCAAAATAGCTCCTAT+CGG | + | chr3.3:56867910-56867929 | None:intergenic | 40.0% | |
| GCATGTCATGATTGTGGAAA+TGG | - | chr3.3:56866050-56866069 | MS.gene008424:intron | 40.0% | |
| GGCACTATAGCATAAGCATA+TGG | + | chr3.3:56867109-56867128 | None:intergenic | 40.0% | |
| TATGCCAACTAACCTGTTGA+TGG | + | chr3.3:56865792-56865811 | None:intergenic | 40.0% | |
| TCCCACCAATGAAACTGTAA+AGG | + | chr3.3:56868227-56868246 | None:intergenic | 40.0% | |
| TCCTCTTCTTCATCAGACAT+AGG | + | chr3.3:56865868-56865887 | None:intergenic | 40.0% | |
| TGAAGCAAACATCAGAAGAG+AGG | + | chr3.3:56867755-56867774 | None:intergenic | 40.0% | |
| TGAGAGAGTTAACCGAATTC+CGG | + | chr3.3:56864292-56864311 | None:intergenic | 40.0% | |
| TGAGGACAAGGTGAATCTTT+AGG | - | chr3.3:56866312-56866331 | MS.gene008424:intron | 40.0% | |
| TGAGGATGATAAAGAAGAGC+AGG | - | chr3.3:56864722-56864741 | MS.gene008424:intron | 40.0% | |
| TGATGTGTAGACATATGCGA+CGG | - | chr3.3:56866720-56866739 | MS.gene008424:intron | 40.0% | |
| TGCTACACTGAAATCGTTTG+AGG | - | chr3.3:56864665-56864684 | MS.gene008424:intron | 40.0% | |
| ! | AAAAGAAGCACATGCCATTG+GGG | - | chr3.3:56868895-56868914 | MS.gene008424:CDS | 40.0% |
| ! | AGTTGATGCTGCAATAGCTA+TGG | + | chr3.3:56866758-56866777 | None:intergenic | 40.0% |
| ! | GATGCGTTGATGTTACTAAG+AGG | - | chr3.3:56865730-56865749 | MS.gene008424:intron | 40.0% |
| !! | GCGTTTTAAACCGGAATATC+GGG | - | chr3.3:56865834-56865853 | MS.gene008424:intron | 40.0% |
| !! | GGCGTTTTAAACCGGAATAT+CGG | - | chr3.3:56865833-56865852 | MS.gene008424:intron | 40.0% |
| !!! | AATTGTTTTTGCCGCTGTCA+TGG | - | chr3.3:56866897-56866916 | MS.gene008424:intron | 40.0% |
| ACACCTCCCTAATGCCAAAA+TGG | + | chr3.3:56865472-56865491 | None:intergenic | 45.0% | |
| ACACGTATTAGTGTCGTGTC+TGG | + | chr3.3:56864431-56864450 | None:intergenic | 45.0% | |
| ACCTTTCTCTTCTCCTATCG+CGG | + | chr3.3:56865977-56865996 | None:intergenic | 45.0% | |
| ACGGACTTTATCAGGAAGTG+TGG | + | chr3.3:56864330-56864349 | None:intergenic | 45.0% | |
| AGAAACTTCCGGAAGTTGAG+AGG | - | chr3.3:56868939-56868958 | MS.gene008424:CDS | 45.0% | |
| AGCTTCTGCAAAACTTCAGG+AGG | + | chr3.3:56868259-56868278 | None:intergenic | 45.0% | |
| AGGGACACTTACATCTGCAT+AGG | + | chr3.3:56867735-56867754 | None:intergenic | 45.0% | |
| AGTATGGGGTCAGAGATAAG+GGG | - | chr3.3:56866123-56866142 | MS.gene008424:intron | 45.0% | |
| AGTGCGAGACCAATTTGTGA+TGG | + | chr3.3:56867941-56867960 | None:intergenic | 45.0% | |
| ATCTGAGGATTTGACTGGGA+AGG | - | chr3.3:56865444-56865463 | MS.gene008424:intron | 45.0% | |
| ATGCTTATGCTATAGTGCCG+AGG | - | chr3.3:56867110-56867129 | MS.gene008424:intron | 45.0% | |
| ATGGAGCTTCGAGTGTTTGA+TGG | - | chr3.3:56865625-56865644 | MS.gene008424:CDS | 45.0% | |
| CAACCACAAGATAGTGACCA+GGG | - | chr3.3:56865937-56865956 | MS.gene008424:intron | 45.0% | |
| CACTTACATCTGCATAGGCA+CGG | + | chr3.3:56867730-56867749 | None:intergenic | 45.0% | |
| CATACCTTGGCTTAAAGCAG+TGG | + | chr3.3:56864399-56864418 | None:intergenic | 45.0% | |
| GAAACTTCCGGAAGTTGAGA+GGG | - | chr3.3:56868940-56868959 | MS.gene008424:CDS | 45.0% | |
| GAGTATGGGGTCAGAGATAA+GGG | - | chr3.3:56866122-56866141 | MS.gene008424:intron | 45.0% | |
| GCAAAGAAGATGCATACTGG+TGG | - | chr3.3:56865647-56865666 | MS.gene008424:CDS | 45.0% | |
| GCCTATGTCTGATGAAGAAG+AGG | - | chr3.3:56865864-56865883 | MS.gene008424:intron | 45.0% | |
| GGACAAGGTGAATCTTTAGG+GGG | - | chr3.3:56866315-56866334 | MS.gene008424:intron | 45.0% | |
| GGATATCATAAGTGTCCACC+TGG | + | chr3.3:56866285-56866304 | None:intergenic | 45.0% | |
| GGCATGATATCCCGATATTC+CGG | + | chr3.3:56865847-56865866 | None:intergenic | 45.0% | |
| GGTCGCCAGATTCATATGTT+TGG | - | chr3.3:56864864-56864883 | MS.gene008424:intron | 45.0% | |
| GTCAGCTTCTGCAAAACTTC+AGG | + | chr3.3:56868262-56868281 | None:intergenic | 45.0% | |
| GTGTCAACACGTTGAATTCC+GGG | + | chr3.3:56868304-56868323 | None:intergenic | 45.0% | |
| TAATGGCTGGTGGTATACTC+TGG | - | chr3.3:56866797-56866816 | MS.gene008424:intron | 45.0% | |
| TATCCTTCACCTTGAGGACA+AGG | - | chr3.3:56866300-56866319 | MS.gene008424:intron | 45.0% | |
| TCAACCACAAGATAGTGACC+AGG | - | chr3.3:56865936-56865955 | MS.gene008424:intron | 45.0% | |
| TCACTGACACCTCTGATCAA+AGG | + | chr3.3:56864534-56864553 | None:intergenic | 45.0% | |
| TCTCTGCTTGATCTAATGGC+TGG | - | chr3.3:56866784-56866803 | MS.gene008424:intron | 45.0% | |
| TCTGACACACCTTTGATCAG+AGG | - | chr3.3:56864522-56864541 | MS.gene008424:intron | 45.0% | |
| TCTGAGGATTTGACTGGGAA+GGG | - | chr3.3:56865445-56865464 | MS.gene008424:intron | 45.0% | |
| TCTGTCAGTTTCTCCTCATC+TGG | + | chr3.3:56865712-56865731 | None:intergenic | 45.0% | |
| TGAGTATGGGGTCAGAGATA+AGG | - | chr3.3:56866121-56866140 | MS.gene008424:intron | 45.0% | |
| TGGTACCGTTATGGCAGAAA+TGG | - | chr3.3:56865606-56865625 | MS.gene008424:CDS | 45.0% | |
| TGTAGACATATGCGACGGTA+AGG | - | chr3.3:56866725-56866744 | MS.gene008424:intron | 45.0% | |
| TGTCAACACGTTGAATTCCG+GGG | + | chr3.3:56868303-56868322 | None:intergenic | 45.0% | |
| TTACTGAGAACTGAGTGCTC+TGG | + | chr3.3:56869001-56869020 | None:intergenic | 45.0% | |
| TTTCCCTGGTCACTATCTTG+TGG | + | chr3.3:56865943-56865962 | None:intergenic | 45.0% | |
| TTTCTGCCATAACGGTACCA+CGG | + | chr3.3:56865606-56865625 | None:intergenic | 45.0% | |
| ! | AAATTGGTCTCGCACTGTCA+TGG | - | chr3.3:56867945-56867964 | MS.gene008424:intron | 45.0% |
| ! | ACAAGGTGAATCTTTAGGGG+GGG | - | chr3.3:56866317-56866336 | MS.gene008424:intron | 45.0% |
| ! | AGGCAAGAACGGACTTTATC+AGG | + | chr3.3:56864338-56864357 | None:intergenic | 45.0% |
| ! | CTTTATCAGGAAGTGTGGAG+AGG | + | chr3.3:56864325-56864344 | None:intergenic | 45.0% |
| ! | GACAAGGTGAATCTTTAGGG+GGG | - | chr3.3:56866316-56866335 | MS.gene008424:intron | 45.0% |
| ! | GGAATCTGACTGCATTGATG+AGG | - | chr3.3:56864704-56864723 | MS.gene008424:intron | 45.0% |
| ! | TACTTCAAGTTATGGGACCC+AGG | - | chr3.3:56866264-56866283 | MS.gene008424:intron | 45.0% |
| ! | TATCTCGTTATAAGGCACCC+CGG | - | chr3.3:56868283-56868302 | MS.gene008424:intron | 45.0% |
| !! | AAGGGGCCATTTTGGCATTA+GGG | - | chr3.3:56865463-56865482 | MS.gene008424:intron | 45.0% |
| !! | GGATTAGTTGCGGCTATTCT+TGG | - | chr3.3:56867859-56867878 | MS.gene008424:intron | 45.0% |
| !! | TACTGGTGGATTGATCCGAT+AGG | - | chr3.3:56867892-56867911 | MS.gene008424:intron | 45.0% |
| !! | TGGTATCAGAGCATCGATCT+TGG | - | chr3.3:56865578-56865597 | MS.gene008424:CDS | 45.0% |
| !! | TGTGCGTAATGGATCCAGTT+AGG | - | chr3.3:56868552-56868571 | MS.gene008424:CDS | 45.0% |
| AATCCAAATCCCACCGCGAT+AGG | - | chr3.3:56865961-56865980 | MS.gene008424:intron | 50.0% | |
| ACATATGCGACGGTAAGGAG+TGG | - | chr3.3:56866730-56866749 | MS.gene008424:intron | 50.0% | |
| ACCGCGATAGGAGAAGAGAA+AGG | - | chr3.3:56865973-56865992 | MS.gene008424:intron | 50.0% | |
| ACGAATGCCCTCTCAACTTC+CGG | + | chr3.3:56868950-56868969 | None:intergenic | 50.0% | |
| AGGGGAGAGAAGGGAAGATT+GGG | - | chr3.3:56865417-56865436 | MS.gene008424:intron | 50.0% | |
| AGTATCCCATCGGAAAGCTG+AGG | - | chr3.3:56866857-56866876 | MS.gene008424:intron | 50.0% | |
| CGCACTGTCATGGAAAATGC+CGG | - | chr3.3:56867955-56867974 | MS.gene008424:intron | 50.0% | |
| CTGAGGATTTGACTGGGAAG+GGG | - | chr3.3:56865446-56865465 | MS.gene008424:intron | 50.0% | |
| CTGCTTGATCTAATGGCTGG+TGG | - | chr3.3:56866787-56866806 | MS.gene008424:intron | 50.0% | |
| CTGTGGTGAAGCTTATGCTC+TGG | - | chr3.3:56867672-56867691 | MS.gene008424:intron | 50.0% | |
| GACGCCATCAACAGGTTAGT+TGG | - | chr3.3:56865785-56865804 | MS.gene008424:intron | 50.0% | |
| GATTCCACCAGTGTGACCAT+TGG | + | chr3.3:56865765-56865784 | None:intergenic | 50.0% | |
| GCAGGATCACCACTTTGATG+TGG | - | chr3.3:56867822-56867841 | MS.gene008424:intron | 50.0% | |
| GGAGCACACAAATCATTCGC+CGG | - | chr3.3:56864270-56864289 | MS.gene008424:CDS | 50.0% | |
| GGGCATCTGAGGATTTGACT+GGG | - | chr3.3:56865440-56865459 | MS.gene008424:intron | 50.0% | |
| GGTAGACATTGAACTGCCAG+AGG | - | chr3.3:56868862-56868881 | MS.gene008424:CDS | 50.0% | |
| GTATCCCATCGGAAAGCTGA+GGG | - | chr3.3:56866858-56866877 | MS.gene008424:intron | 50.0% | |
| GTTTGAGGAAGTGGATGCTG+TGG | - | chr3.3:56864680-56864699 | MS.gene008424:intron | 50.0% | |
| TAGGGGAGAGAAGGGAAGAT+TGG | - | chr3.3:56865416-56865435 | MS.gene008424:intron | 50.0% | |
| TCACCTTGTCCTCAAGGTGA+AGG | + | chr3.3:56866306-56866325 | None:intergenic | 50.0% | |
| TTCTCTTCTCCTATCGCGGT+GGG | + | chr3.3:56865973-56865992 | None:intergenic | 50.0% | |
| TTGGAACCGTGGTACCGTTA+TGG | - | chr3.3:56865597-56865616 | MS.gene008424:CDS | 50.0% | |
| TTGGAGTGGTTGACGACTCA+AGG | - | chr3.3:56865901-56865920 | MS.gene008424:intron | 50.0% | |
| TTGGCTTAAAGCAGTGGCGT+TGG | + | chr3.3:56864393-56864412 | None:intergenic | 50.0% | |
| TTTCTCTTCTCCTATCGCGG+TGG | + | chr3.3:56865974-56865993 | None:intergenic | 50.0% | |
| ! | AACGCCACTGCTTTAAGCCA+AGG | - | chr3.3:56864392-56864411 | MS.gene008424:intron | 50.0% |
| ! | CTGGTGTCAGCATCATACCT+TGG | + | chr3.3:56864412-56864431 | None:intergenic | 50.0% |
| ! | TTCAAGTTATGGGACCCAGG+TGG | - | chr3.3:56866267-56866286 | MS.gene008424:intron | 50.0% |
| !! | GAAGGGGCCATTTTGGCATT+AGG | - | chr3.3:56865462-56865481 | MS.gene008424:intron | 50.0% |
| ACCAAGTGTGGCCATGACAG+CGG | + | chr3.3:56866911-56866930 | None:intergenic | 55.0% | |
| CGGTGGGATTTGGATTTCCC+TGG | + | chr3.3:56865957-56865976 | None:intergenic | 55.0% | |
| CTGGTGGCTGCTATGCATTG+AGG | - | chr3.3:56865663-56865682 | MS.gene008424:CDS | 55.0% | |
| CTTCTCTCCGCCATACACGA+CGG | - | chr3.3:56864245-56864264 | MS.gene008424:CDS | 55.0% | |
| GGAGAGAAGGGAAGATTGGG+GGG | - | chr3.3:56865420-56865439 | MS.gene008424:intron | 55.0% | |
| GGGAGAGAAGGGAAGATTGG+GGG | - | chr3.3:56865419-56865438 | MS.gene008424:intron | 55.0% | |
| GGGGAGAGAAGGGAAGATTG+GGG | - | chr3.3:56865418-56865437 | MS.gene008424:intron | 55.0% | |
| GTGGAATCGACGCCATCAAC+AGG | - | chr3.3:56865777-56865796 | MS.gene008424:intron | 55.0% | |
| TAAGAGGTCGTGCTCGCCAA+TGG | - | chr3.3:56865746-56865765 | MS.gene008424:intron | 55.0% | |
| TCTCCTATCGCGGTGGGATT+TGG | + | chr3.3:56865967-56865986 | None:intergenic | 55.0% | |
| TGAGGAAGTGGATGCTGTGG+TGG | - | chr3.3:56864683-56864702 | MS.gene008424:intron | 55.0% | |
| TGCACCCTCAGCTTTCCGAT+GGG | + | chr3.3:56866865-56866884 | None:intergenic | 55.0% | |
| ! | ATTCGGGTTCGGATCCTACC+AGG | - | chr3.3:56864219-56864238 | MS.gene008424:CDS | 55.0% |
| ! | GGGGCATCTGAGGATTTGAC+TGG | - | chr3.3:56865439-56865458 | MS.gene008424:intron | 55.0% |
| ! | TCGTGTATGGCGGAGAGAAG+CGG | + | chr3.3:56864245-56864264 | None:intergenic | 55.0% |
| ! | TGACTGGGAAGGGGCCATTT+TGG | - | chr3.3:56865455-56865474 | MS.gene008424:intron | 55.0% |
| !! | GAGCATCGATCTTGGAACCG+TGG | - | chr3.3:56865586-56865605 | MS.gene008424:CDS | 55.0% |
| !! | GGGCCATTTTGGCATTAGGG+AGG | - | chr3.3:56865466-56865485 | MS.gene008424:intron | 55.0% |
| CTCGCCAATGGTCACACTGG+TGG | - | chr3.3:56865758-56865777 | MS.gene008424:intron | 60.0% | |
| CTGCACCCTCAGCTTTCCGA+TGG | + | chr3.3:56866866-56866885 | None:intergenic | 60.0% | |
| GTGCTCGCCAATGGTCACAC+TGG | - | chr3.3:56865755-56865774 | MS.gene008424:intron | 60.0% | |
| TCTCCGCCATACACGACGGT+CGG | - | chr3.3:56864249-56864268 | MS.gene008424:CDS | 60.0% | |
| TGTGCTCCGACCGTCGTGTA+TGG | + | chr3.3:56864258-56864277 | None:intergenic | 60.0% | |
| ! | AAGCTGAGGGTGCAGCCAGT+AGG | - | chr3.3:56866871-56866890 | MS.gene008424:intron | 60.0% |
| !! | GGAAGATTGGGGGGCATCTG+AGG | - | chr3.3:56865429-56865448 | MS.gene008424:intron | 60.0% |
| GCCGCTGTCATGGCCACACT+TGG | - | chr3.3:56866907-56866926 | MS.gene008424:intron | 65.0% | |
| GCTCCGACCGTCGTGTATGG+CGG | + | chr3.3:56864255-56864274 | None:intergenic | 65.0% | |
| ! | TATGGCGGAGAGAAGCGGCC+TGG | + | chr3.3:56864240-56864259 | None:intergenic | 65.0% |
| GCGGAGAGAAGCGGCCTGGT+AGG | + | chr3.3:56864236-56864255 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 56864209 | 56869039 | 56864209 | ID=MS.gene008424 |
| chr3.3 | mRNA | 56864209 | 56869039 | 56864209 | ID=MS.gene008424.t1;Parent=MS.gene008424 |
| chr3.3 | exon | 56868835 | 56869039 | 56868835 | ID=MS.gene008424.t1.exon1;Parent=MS.gene008424.t1 |
| chr3.3 | CDS | 56868835 | 56869039 | 56868835 | ID=cds.MS.gene008424.t1;Parent=MS.gene008424.t1 |
| chr3.3 | exon | 56868442 | 56868611 | 56868442 | ID=MS.gene008424.t1.exon2;Parent=MS.gene008424.t1 |
| chr3.3 | CDS | 56868442 | 56868611 | 56868442 | ID=cds.MS.gene008424.t1;Parent=MS.gene008424.t1 |
| chr3.3 | exon | 56866320 | 56866518 | 56866320 | ID=MS.gene008424.t1.exon3;Parent=MS.gene008424.t1 |
| chr3.3 | CDS | 56866320 | 56866518 | 56866320 | ID=cds.MS.gene008424.t1;Parent=MS.gene008424.t1 |
| chr3.3 | exon | 56865506 | 56865684 | 56865506 | ID=MS.gene008424.t1.exon4;Parent=MS.gene008424.t1 |
| chr3.3 | CDS | 56865506 | 56865684 | 56865506 | ID=cds.MS.gene008424.t1;Parent=MS.gene008424.t1 |
| chr3.3 | exon | 56865272 | 56865422 | 56865272 | ID=MS.gene008424.t1.exon5;Parent=MS.gene008424.t1 |
| chr3.3 | CDS | 56865272 | 56865422 | 56865272 | ID=cds.MS.gene008424.t1;Parent=MS.gene008424.t1 |
| chr3.3 | exon | 56864885 | 56865015 | 56864885 | ID=MS.gene008424.t1.exon6;Parent=MS.gene008424.t1 |
| chr3.3 | CDS | 56864885 | 56865015 | 56864885 | ID=cds.MS.gene008424.t1;Parent=MS.gene008424.t1 |
| chr3.3 | exon | 56864209 | 56864385 | 56864209 | ID=MS.gene008424.t1.exon7;Parent=MS.gene008424.t1 |
| chr3.3 | CDS | 56864209 | 56864385 | 56864209 | ID=cds.MS.gene008424.t1;Parent=MS.gene008424.t1 |
| Gene Sequence |
| Protein sequence |
