Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98420.t1 | XP_003621788.1 | 99 | 400 | 4 | 0 | 1 | 400 | 1 | 400 | 1.00E-222 | 782.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98420.t1 | O80632 | 81.8 | 395 | 70 | 1 | 5 | 399 | 1 | 393 | 6.3e-184 | 644.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98420.t1 | G7KVN9 | 99.0 | 400 | 4 | 0 | 1 | 400 | 1 | 400 | 7.6e-223 | 782.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049396 | MS.gene98420 | 0.822503 | 2.29E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene98420 | 0.80063 | 1.32E-48 | -1.69E-46 |
| MS.gene050380 | MS.gene98420 | -0.805158 | 1.53E-49 | -1.69E-46 |
| MS.gene050502 | MS.gene98420 | 0.846457 | 2.15E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene98420 | 0.807157 | 5.80E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene98420 | 0.810379 | 1.19E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene98420 | 0.821134 | 4.74E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene98420 | 0.8072 | 5.68E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene98420 | 0.820833 | 5.56E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene98420 | 0.812607 | 3.89E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene98420 | 0.833592 | 4.88E-56 | -1.69E-46 |
| MS.gene054408 | MS.gene98420 | 0.802323 | 5.92E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene98420 | -0.806193 | 9.26E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene98420 | -0.810691 | 1.02E-50 | -1.69E-46 |
| MS.gene055629 | MS.gene98420 | 0.809662 | 1.69E-50 | -1.69E-46 |
| MS.gene055959 | MS.gene98420 | -0.800517 | 1.39E-48 | -1.69E-46 |
| MS.gene056166 | MS.gene98420 | 0.82459 | 7.43E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene98420 | 0.830751 | 2.46E-55 | -1.69E-46 |
| MS.gene056446 | MS.gene98420 | 0.824869 | 6.39E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene98420 | 0.826514 | 2.60E-54 | -1.69E-46 |
| MS.gene057086 | MS.gene98420 | 0.842726 | 2.17E-58 | -1.69E-46 |
| MS.gene05787 | MS.gene98420 | 0.814995 | 1.16E-51 | -1.69E-46 |
| MS.gene058109 | MS.gene98420 | -0.801379 | 9.26E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene98420 | -0.813493 | 2.49E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene98420 | -0.813662 | 2.29E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene98420 | -0.811462 | 6.92E-51 | -1.69E-46 |
| MS.gene058180 | MS.gene98420 | -0.812517 | 4.07E-51 | -1.69E-46 |
| MS.gene058420 | MS.gene98420 | 0.817552 | 3.11E-52 | -1.69E-46 |
| MS.gene059037 | MS.gene98420 | -0.814391 | 1.58E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene98420 | 0.860073 | 2.66E-63 | -1.69E-46 |
| MS.gene059368 | MS.gene98420 | 0.840424 | 8.77E-58 | -1.69E-46 |
| MS.gene059517 | MS.gene98420 | 0.823942 | 1.06E-53 | -1.69E-46 |
| MS.gene059667 | MS.gene98420 | 0.824284 | 8.77E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene98420 | 0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene98420 | 0.834149 | 3.54E-56 | -1.69E-46 |
| MS.gene060778 | MS.gene98420 | 0.826357 | 2.84E-54 | -1.69E-46 |
| MS.gene06097 | MS.gene98420 | 0.828854 | 7.13E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53865 | MS.gene98420 | PPI |
| MS.gene049605 | MS.gene98420 | PPI |
| MS.gene05112 | MS.gene98420 | PPI |
| MS.gene98420 | MS.gene069718 | PPI |
| MS.gene98420 | MS.gene038979 | PPI |
| MS.gene045727 | MS.gene98420 | PPI |
| MS.gene98420 | MS.gene36106 | PPI |
| MS.gene98420 | MS.gene068947 | PPI |
| MS.gene98420 | MS.gene008424 | PPI |
| MS.gene98420 | MS.gene42745 | PPI |
| MS.gene78686 | MS.gene98420 | PPI |
| MS.gene62500 | MS.gene98420 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98420.t1 | MTR_7g022890 | 99.000 | 400 | 4 | 0 | 1 | 400 | 1 | 400 | 0.0 | 828 |
| MS.gene98420.t1 | MTR_7g022890 | 99.115 | 339 | 3 | 0 | 62 | 400 | 9 | 347 | 0.0 | 701 |
| MS.gene98420.t1 | MTR_8g046550 | 60.733 | 382 | 140 | 5 | 21 | 395 | 12 | 390 | 4.59e-160 | 456 |
| MS.gene98420.t1 | MTR_2g064405 | 62.400 | 375 | 133 | 5 | 25 | 395 | 19 | 389 | 8.18e-160 | 455 |
| MS.gene98420.t1 | MTR_2g064405 | 66.773 | 313 | 102 | 2 | 84 | 395 | 1 | 312 | 5.42e-147 | 419 |
| MS.gene98420.t1 | MTR_3g080090 | 57.487 | 374 | 145 | 4 | 29 | 397 | 33 | 397 | 5.94e-145 | 417 |
| MS.gene98420.t1 | MTR_3g062610 | 57.012 | 328 | 136 | 2 | 69 | 396 | 72 | 394 | 1.31e-129 | 379 |
| MS.gene98420.t1 | MTR_5g075680 | 56.402 | 328 | 138 | 3 | 69 | 396 | 12 | 334 | 3.51e-126 | 368 |
| MS.gene98420.t1 | MTR_5g075680 | 56.402 | 328 | 138 | 3 | 69 | 396 | 65 | 387 | 6.28e-126 | 369 |
| MS.gene98420.t1 | MTR_3g062610 | 49.612 | 258 | 120 | 3 | 69 | 326 | 72 | 319 | 6.61e-83 | 257 |
| MS.gene98420.t1 | MTR_5g075680 | 50.633 | 237 | 113 | 2 | 69 | 305 | 65 | 297 | 1.01e-76 | 240 |
| MS.gene98420.t1 | MTR_5g075680 | 48.087 | 183 | 91 | 2 | 69 | 251 | 65 | 243 | 5.63e-51 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98420.t1 | AT2G39450 | 81.566 | 396 | 71 | 1 | 5 | 400 | 1 | 394 | 0.0 | 611 |
| MS.gene98420.t1 | AT1G16310 | 59.898 | 394 | 138 | 5 | 13 | 395 | 41 | 425 | 1.93e-164 | 468 |
| MS.gene98420.t1 | AT1G79520 | 62.368 | 380 | 129 | 4 | 24 | 395 | 25 | 398 | 4.66e-163 | 464 |
| MS.gene98420.t1 | AT1G79520 | 60.982 | 387 | 135 | 5 | 24 | 395 | 25 | 410 | 1.25e-162 | 463 |
| MS.gene98420.t1 | AT1G79520 | 66.766 | 334 | 109 | 2 | 63 | 395 | 13 | 345 | 3.31e-162 | 459 |
| MS.gene98420.t1 | AT1G79520 | 66.766 | 334 | 109 | 2 | 63 | 395 | 13 | 345 | 3.31e-162 | 459 |
| MS.gene98420.t1 | AT1G16310 | 66.773 | 313 | 102 | 2 | 84 | 395 | 1 | 312 | 8.29e-151 | 429 |
| MS.gene98420.t1 | AT3G58060 | 53.693 | 352 | 158 | 3 | 50 | 396 | 51 | 402 | 1.31e-126 | 371 |
| MS.gene98420.t1 | AT3G58060 | 53.693 | 352 | 158 | 3 | 50 | 396 | 51 | 402 | 1.31e-126 | 371 |
Find 93 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTTCTGGACCTCCTTTC+TGG | 0.043075 | 7.4:+79051398 | MS.gene98420:CDS |
| TCCTTTCTGGATTTATCTTA+TGG | 0.146709 | 7.4:+79051411 | MS.gene98420:CDS |
| TCTAGGGCTGCAAATAATTT+TGG | 0.184356 | 7.4:+79051651 | MS.gene98420:CDS |
| CTTCTTTCAGTTTCAGATAA+TGG | 0.244027 | 7.4:+79048830 | MS.gene98420:CDS |
| CATCCAATCATCAAAATAAT+TGG | 0.258777 | 7.4:-79052010 | None:intergenic |
| TGGTCTAATTGCTGCACTTT+TGG | 0.273816 | 7.4:+79051987 | MS.gene98420:CDS |
| GCAGAGCGTGGTTTCCTTCC+CGG | 0.286014 | 7.4:+79050865 | MS.gene98420:CDS |
| CATGACTGCTATGGTGTTCT+TGG | 0.286309 | 7.4:+79048938 | MS.gene98420:CDS |
| AATAGAAACCTTTGACATTC+CGG | 0.314411 | 7.4:-79050884 | None:intergenic |
| AAATTGTGTGCAGGGAATTC+TGG | 0.316840 | 7.4:+79051606 | MS.gene98420:intron |
| GCATGCACAAGCACATTCTT+AGG | 0.345663 | 7.4:+79053943 | MS.gene98420:CDS |
| TTGCAAGAGGCTCATGATAT+CGG | 0.352519 | 7.4:+79053833 | MS.gene98420:CDS |
| CTCTGCTAAGGCATCCATTT+CGG | 0.359363 | 7.4:-79050848 | None:intergenic |
| GGAACAAGAGCGCTGGGTTG+TGG | 0.362336 | 7.4:+79051843 | MS.gene98420:CDS |
| AATCCGTATCAGTACCCTAT+TGG | 0.365036 | 7.4:+79051461 | MS.gene98420:CDS |
| ATAGAAACCTTTGACATTCC+GGG | 0.389148 | 7.4:-79050883 | None:intergenic |
| GCCTCTGTCATGGCGACTCT+AGG | 0.392667 | 7.4:+79051634 | MS.gene98420:CDS |
| TGCAAGAGGCTCATGATATC+GGG | 0.405352 | 7.4:+79053834 | MS.gene98420:CDS |
| AGAGAAAGCTCTTCTTCGTT+AGG | 0.406946 | 7.4:-79048809 | None:intergenic |
| GCTTGAAGGCTTTACCGAAA+TGG | 0.410063 | 7.4:+79050834 | MS.gene98420:CDS |
| AAGACACCTAAACCCTCTTC+TGG | 0.415856 | 7.4:+79048911 | MS.gene98420:CDS |
| TGCATCCGCTTCTTTCCAAT+AGG | 0.419106 | 7.4:-79051476 | None:intergenic |
| TGAATACCAGAAGAGGGTTT+AGG | 0.421461 | 7.4:-79048917 | None:intergenic |
| TAAGACACATTGACACTGTT+CGG | 0.424020 | 7.4:+79053747 | MS.gene98420:CDS |
| ATAGGGTACTGATACGGATT+TGG | 0.428517 | 7.4:-79051458 | None:intergenic |
| GCATCCGCTTCTTTCCAATA+GGG | 0.430128 | 7.4:-79051475 | None:intergenic |
| CAGCAGGTTGAAGTGCTTGA+AGG | 0.440105 | 7.4:+79050820 | MS.gene98420:CDS |
| GATGTGATCACTAATGTGAT+TGG | 0.442921 | 7.4:+79051967 | MS.gene98420:CDS |
| TCTGATTGATGCATAAACTT+TGG | 0.446170 | 7.4:-79051339 | None:intergenic |
| ATCCACTTTAGACTCTCTTC+TGG | 0.448253 | 7.4:+79051385 | MS.gene98420:CDS |
| TATTATGCTTTCAGTGACTT+TGG | 0.454551 | 7.4:+79051867 | MS.gene98420:CDS |
| CAGATAATGGTGACCGGTCA+TGG | 0.461385 | 7.4:+79048843 | MS.gene98420:CDS |
| GAAAATGTGAATTCACTTGT+TGG | 0.461809 | 7.4:+79053659 | MS.gene98420:CDS |
| GATGGCAAACGTCTCGCTCC+TGG | 0.461933 | 7.4:-79051279 | None:intergenic |
| ACAAAAGCACGCTCGATCTC+AGG | 0.463499 | 7.4:-79053887 | None:intergenic |
| GAACAAGAGCGCTGGGTTGT+GGG | 0.464087 | 7.4:+79051844 | MS.gene98420:CDS |
| AAGACACATTGACACTGTTC+GGG | 0.476544 | 7.4:+79053748 | MS.gene98420:CDS |
| AGAAACTTACATACCTCTGC+TGG | 0.477384 | 7.4:+79053708 | MS.gene98420:CDS |
| GAATGTGCTTGTGCATGCTC+AGG | 0.480448 | 7.4:-79053938 | None:intergenic |
| GTCTAAAGTGGATGCAATGA+TGG | 0.499685 | 7.4:-79051375 | None:intergenic |
| GACTAAGGAACAAGAGCGCT+GGG | 0.500550 | 7.4:+79051837 | MS.gene98420:CDS |
| AGGAGCGAGATAAGTTAGCC+AGG | 0.501817 | 7.4:+79051261 | MS.gene98420:CDS |
| TCTGGTGTTTGCCTCTGTCA+TGG | 0.505859 | 7.4:+79051624 | MS.gene98420:CDS |
| CCTCTGTCATGGCGACTCTA+GGG | 0.513170 | 7.4:+79051635 | MS.gene98420:CDS |
| TCTGGTATTCATGACTGCTA+TGG | 0.514903 | 7.4:+79048929 | MS.gene98420:CDS |
| GTAAGTTTCTGAAGATACTC+TGG | 0.516377 | 7.4:-79053695 | None:intergenic |
| TAATACCTTCAGCTTGACTA+AGG | 0.517479 | 7.4:+79051822 | MS.gene98420:CDS |
| CTTACAATGATAGCACCAAC+AGG | 0.517600 | 7.4:-79052036 | None:intergenic |
| TCTTGCAAAGGCATGTCTGC+TGG | 0.522402 | 7.4:-79053818 | None:intergenic |
| ACTGTTCGGGCATATACATT+CGG | 0.522461 | 7.4:+79053761 | MS.gene98420:CDS |
| CGAAGTTCAACCGCCATGAC+CGG | 0.524564 | 7.4:-79048856 | None:intergenic |
| CGGCTCTCACTACTTTGTTG+AGG | 0.525412 | 7.4:+79053781 | MS.gene98420:CDS |
| TGACTAAGGAACAAGAGCGC+TGG | 0.528993 | 7.4:+79051836 | MS.gene98420:CDS |
| AAGGAAACCACGCTCTGCTA+AGG | 0.531828 | 7.4:-79050860 | None:intergenic |
| TTTCCAATAGGGTACTGATA+CGG | 0.535905 | 7.4:-79051464 | None:intergenic |
| TTTCCTTCCCGGAATGTCAA+AGG | 0.540211 | 7.4:+79050876 | MS.gene98420:CDS |
| AGCTATGTTCGATATTCTGA+TGG | 0.545423 | 7.4:-79051297 | None:intergenic |
| CAGTTTCAGATAATGGTGAC+CGG | 0.548490 | 7.4:+79048837 | MS.gene98420:CDS |
| TACAGTGTATATTAGTGTGC+GGG | 0.552886 | 7.4:-79051680 | None:intergenic |
| GACCGGGAAAATGGTGGAGA+CGG | 0.557316 | 7.4:+79048778 | MS.gene98420:CDS |
| TGCTGAGTACTATCAGCAGC+AGG | 0.563087 | 7.4:+79050804 | MS.gene98420:CDS |
| AGCAGACATGCCTTTGCAAG+AGG | 0.566228 | 7.4:+79053820 | MS.gene98420:CDS |
| GATTGTGAAGGCCTATGCTC+AGG | 0.566596 | 7.4:+79051933 | MS.gene98420:CDS |
| CCTTGTGGTGGTTCCAGCAG+AGG | 0.569864 | 7.4:-79053721 | None:intergenic |
| ATACGGATTTGGTGTTTGCA+TGG | 0.571306 | 7.4:-79051447 | None:intergenic |
| AAGTGGATGCAATGATGGCA+AGG | 0.572995 | 7.4:-79051370 | None:intergenic |
| AAAGAAGCGGATGCAACCAT+TGG | 0.577177 | 7.4:+79051484 | MS.gene98420:CDS |
| ACCATAAGATAAATCCAGAA+AGG | 0.578791 | 7.4:-79051412 | None:intergenic |
| GATGATTGGATGGATCCTGT+TGG | 0.588009 | 7.4:+79052021 | MS.gene98420:CDS |
| GCAGTCATGAATACCAGAAG+AGG | 0.589632 | 7.4:-79048924 | None:intergenic |
| GTCCAGAAGAGAGTCTAAAG+TGG | 0.592680 | 7.4:-79051387 | None:intergenic |
| GTTTATGCATCAATCAGAAG+TGG | 0.593927 | 7.4:+79051344 | MS.gene98420:CDS |
| ATATCATGAGCCTCTTGCAA+AGG | 0.600551 | 7.4:-79053830 | None:intergenic |
| CGGGAAAATGGTGGAGACGG+TGG | 0.602898 | 7.4:+79048781 | MS.gene98420:CDS |
| TAGAATGACCGGGAAAATGG+TGG | 0.604598 | 7.4:+79048772 | None:intergenic |
| TTGTTCCTTAGTCAAGCTGA+AGG | 0.609444 | 7.4:-79051827 | None:intergenic |
| AGTGGATGCAATGATGGCAA+GGG | 0.615205 | 7.4:-79051369 | None:intergenic |
| CAATGTGTCTTACAGCCTTG+TGG | 0.618083 | 7.4:-79053736 | None:intergenic |
| CCCTAGAGTCGCCATGACAG+AGG | 0.619378 | 7.4:-79051635 | None:intergenic |
| CTTTGTACACAATTCGCACA+TGG | 0.622183 | 7.4:+79053621 | MS.gene98420:CDS |
| CACATGGTCAATGACAGTGT+TGG | 0.625243 | 7.4:+79053637 | MS.gene98420:CDS |
| AATATCGAACATAGCTAACA+TGG | 0.635618 | 7.4:+79051304 | MS.gene98420:CDS |
| TGTGTCTTACAGCCTTGTGG+TGG | 0.637411 | 7.4:-79053733 | None:intergenic |
| ATAAGATAAATCCAGAAAGG+AGG | 0.638365 | 7.4:-79051409 | None:intergenic |
| CAGTCATGAATACCAGAAGA+GGG | 0.642062 | 7.4:-79048923 | None:intergenic |
| CCTCTGCTGGAACCACCACA+AGG | 0.649186 | 7.4:+79053721 | MS.gene98420:CDS |
| ATGGATGCCTTAGCAGAGCG+TGG | 0.649962 | 7.4:+79050853 | MS.gene98420:CDS |
| AAACCTTTGACATTCCGGGA+AGG | 0.650213 | 7.4:-79050879 | None:intergenic |
| TTACAGTGTATATTAGTGTG+CGG | 0.655284 | 7.4:-79051681 | None:intergenic |
| CAATCTCATTAGTAAAAGAG+CGG | 0.658060 | 7.4:-79051915 | None:intergenic |
| AGTACCCTATTGGAAAGAAG+CGG | 0.658390 | 7.4:+79051471 | MS.gene98420:CDS |
| GCAAGAGGCTCATGATATCG+GGG | 0.674449 | 7.4:+79053835 | MS.gene98420:CDS |
| ATAATGGTGACCGGTCATGG+CGG | 0.763548 | 7.4:+79048846 | MS.gene98420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATGAAAAATAAATAAAA+AGG | - | chr7.4:79052935-79052954 | None:intergenic | 10.0% |
| !!! | CATTCAATTTTTTTTTTTAA+CGG | + | chr7.4:79052443-79052462 | MS.gene98420:intron | 10.0% |
| !!! | TATTTATTTTTCATTGTTAA+GGG | + | chr7.4:79052938-79052957 | MS.gene98420:intron | 10.0% |
| !!! | TTATTTATTTTTCATTGTTA+AGG | + | chr7.4:79052937-79052956 | MS.gene98420:intron | 10.0% |
| !! | AATCTGAGAAAATAAATTAA+CGG | - | chr7.4:79049270-79049289 | None:intergenic | 15.0% |
| !! | ATAGGATTAATTTACTAAAT+TGG | + | chr7.4:79052565-79052584 | MS.gene98420:intron | 15.0% |
| !! | CGTTAAAAAAAAAAATTGAA+TGG | - | chr7.4:79052445-79052464 | None:intergenic | 15.0% |
| !! | AACTAAAATGTGTAGATATT+AGG | - | chr7.4:79052274-79052293 | None:intergenic | 20.0% |
| !! | AAGTATTATAGATTCACATA+AGG | - | chr7.4:79052072-79052091 | None:intergenic | 20.0% |
| !! | AGCTCTTAATTAAGTATTAT+TGG | - | chr7.4:79050944-79050963 | None:intergenic | 20.0% |
| !! | ATACAATTTCAAAGATTCTA+TGG | - | chr7.4:79049084-79049103 | None:intergenic | 20.0% |
| !! | ATGATTCCTTTCTTATATAT+GGG | + | chr7.4:79052145-79052164 | MS.gene98420:intron | 20.0% |
| !! | ATTATTAAAGAAACAAGAAG+GGG | - | chr7.4:79052536-79052555 | None:intergenic | 20.0% |
| !! | ATTCATCAATTGTTTATCAA+AGG | - | chr7.4:79053050-79053069 | None:intergenic | 20.0% |
| !! | ATTGACATTCGTATTTAATT+AGG | - | chr7.4:79052104-79052123 | None:intergenic | 20.0% |
| !! | ATTTAAACTTGAATGATCTT+TGG | + | chr7.4:79052405-79052424 | MS.gene98420:intron | 20.0% |
| !! | CATTATTAAAGAAACAAGAA+GGG | - | chr7.4:79052537-79052556 | None:intergenic | 20.0% |
| !! | CTCATTAATTTATAGGTAAT+TGG | + | chr7.4:79051767-79051786 | MS.gene98420:intron | 20.0% |
| !! | GATATTTAACAACTATAAGA+TGG | - | chr7.4:79053553-79053572 | None:intergenic | 20.0% |
| !! | GTAAATAAATGCAATGAATA+AGG | - | chr7.4:79052331-79052350 | None:intergenic | 20.0% |
| !! | TATTATTAACAGCTGTTATT+TGG | - | chr7.4:79049850-79049869 | None:intergenic | 20.0% |
| !!! | ATAATAGCAGAAATGATTTT+TGG | + | chr7.4:79049679-79049698 | MS.gene98420:intron | 20.0% |
| !!! | CTTCTTGTTTCTTTAATAAT+GGG | + | chr7.4:79052536-79052555 | MS.gene98420:intron | 20.0% |
| !!! | TACAATTTGTTTTGTATCAA+TGG | + | chr7.4:79050099-79050118 | MS.gene98420:intron | 20.0% |
| !!! | TCAAACAGAATATTAATTTG+AGG | - | chr7.4:79051515-79051534 | None:intergenic | 20.0% |
| ! | AAAATGTTCTTTGATGTATC+TGG | + | chr7.4:79049129-79049148 | MS.gene98420:intron | 25.0% |
| ! | AACTTATTGCACTTAAATCA+CGG | - | chr7.4:79050570-79050589 | None:intergenic | 25.0% |
| ! | AAGAATTACACGTAAGTAAA+AGG | - | chr7.4:79053588-79053607 | None:intergenic | 25.0% |
| ! | AATATTAGAGGGATTTGAAA+TGG | - | chr7.4:79052773-79052792 | None:intergenic | 25.0% |
| ! | AATTTACTAAATTGGTGGAA+AGG | + | chr7.4:79052573-79052592 | MS.gene98420:intron | 25.0% |
| ! | ACAGCTGTTAATAATAAAGT+AGG | + | chr7.4:79049854-79049873 | MS.gene98420:intron | 25.0% |
| ! | AGAATTACACGTAAGTAAAA+GGG | - | chr7.4:79053587-79053606 | None:intergenic | 25.0% |
| ! | AGCTGTTAATAATAAAGTAG+GGG | + | chr7.4:79049856-79049875 | MS.gene98420:intron | 25.0% |
| ! | ATGTAATAAGATGTTTCCAT+AGG | + | chr7.4:79051125-79051144 | MS.gene98420:intron | 25.0% |
| ! | ATTCTACCCATATATAAGAA+AGG | - | chr7.4:79052154-79052173 | None:intergenic | 25.0% |
| ! | ATTTAACAACTATAAGATGG+CGG | - | chr7.4:79053550-79053569 | None:intergenic | 25.0% |
| ! | ATTTACTAAATTGGTGGAAA+GGG | + | chr7.4:79052574-79052593 | MS.gene98420:intron | 25.0% |
| ! | CAGCTGTTAATAATAAAGTA+GGG | + | chr7.4:79049855-79049874 | MS.gene98420:intron | 25.0% |
| ! | CATATATAAGAAAGGAATCA+TGG | - | chr7.4:79052146-79052165 | None:intergenic | 25.0% |
| ! | CATCCAATCATCAAAATAAT+TGG | - | chr7.4:79052013-79052032 | None:intergenic | 25.0% |
| ! | CATGATTCCTTTCTTATATA+TGG | + | chr7.4:79052144-79052163 | MS.gene98420:intron | 25.0% |
| ! | CATTTCTGCTATTATTTGTA+GGG | - | chr7.4:79049674-79049693 | None:intergenic | 25.0% |
| ! | CCATTATTAAAGAAACAAGA+AGG | - | chr7.4:79052538-79052557 | None:intergenic | 25.0% |
| ! | CTATATTGAACCAAATATTC+AGG | - | chr7.4:79052499-79052518 | None:intergenic | 25.0% |
| ! | GGATTAATTTACTAAATTGG+TGG | + | chr7.4:79052568-79052587 | MS.gene98420:intron | 25.0% |
| ! | GTTGGATCTCATTAATTTAT+AGG | + | chr7.4:79051760-79051779 | MS.gene98420:intron | 25.0% |
| ! | TATATCCTTGTCAAAAAAGT+AGG | - | chr7.4:79053007-79053026 | None:intergenic | 25.0% |
| ! | TCAAAAAAGTAGGTATTACA+AGG | - | chr7.4:79052997-79053016 | None:intergenic | 25.0% |
| ! | TCATTTCTGCTATTATTTGT+AGG | - | chr7.4:79049675-79049694 | None:intergenic | 25.0% |
| ! | TCGTATTTAATTAGGCTATA+AGG | - | chr7.4:79052096-79052115 | None:intergenic | 25.0% |
| ! | TCTTATATATGGGTAGAATT+GGG | + | chr7.4:79052155-79052174 | MS.gene98420:intron | 25.0% |
| ! | TGAATATATAAAGAGCCATA+AGG | - | chr7.4:79050197-79050216 | None:intergenic | 25.0% |
| ! | TTAGCTTCTTAACAAAAAGT+TGG | - | chr7.4:79049520-79049539 | None:intergenic | 25.0% |
| ! | TTCTTATATATGGGTAGAAT+TGG | + | chr7.4:79052154-79052173 | MS.gene98420:intron | 25.0% |
| ! | TTTAGATCTAGAGAAGATAA+AGG | - | chr7.4:79050919-79050938 | None:intergenic | 25.0% |
| !! | AACAGTTAAAAGTAGTTTGT+TGG | + | chr7.4:79051742-79051761 | MS.gene98420:intron | 25.0% |
| !! | CCTTCTTGTTTCTTTAATAA+TGG | + | chr7.4:79052535-79052554 | MS.gene98420:intron | 25.0% |
| !! | CTGAATATTTGGTTCAATAT+AGG | + | chr7.4:79052497-79052516 | MS.gene98420:intron | 25.0% |
| !! | CTTTCTATTCTAAGTTTGTT+TGG | + | chr7.4:79050694-79050713 | MS.gene98420:intron | 25.0% |
| !! | GATGTTTTCTTATGAAATCA+TGG | + | chr7.4:79051060-79051079 | MS.gene98420:intron | 25.0% |
| !! | TCTTGGTTTAGTTCAAAAAT+TGG | - | chr7.4:79052852-79052871 | None:intergenic | 25.0% |
| !! | TTGATCTGTTCTGATATTTT+TGG | + | chr7.4:79049946-79049965 | MS.gene98420:intron | 25.0% |
| !! | TTGTTTCTTTAATAATGGGA+GGG | + | chr7.4:79052540-79052559 | MS.gene98420:intron | 25.0% |
| !! | TTTTACTAATGAGATTGTGA+AGG | + | chr7.4:79051921-79051940 | MS.gene98420:CDS | 25.0% |
| !!! | AAAAGGAACATTGATTTACT+TGG | - | chr7.4:79052918-79052937 | None:intergenic | 25.0% |
| !!! | CAATTATTTTGATGATTGGA+TGG | + | chr7.4:79052011-79052030 | MS.gene98420:CDS | 25.0% |
| !!! | TAATACCTACTTTTTTGACA+AGG | + | chr7.4:79052999-79053018 | MS.gene98420:intron | 25.0% |
| !!! | TAGAAAGTGTTATCAAATAG+CGG | + | chr7.4:79053408-79053427 | MS.gene98420:intron | 25.0% |
| !!! | TCAAAGAACATTTTGAAATG+TGG | - | chr7.4:79049123-79049142 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTGTTGAGAATTT+CGG | + | chr7.4:79050388-79050407 | MS.gene98420:intron | 25.0% |
| !!! | TTTTGCTTTATTTCTTGCTA+TGG | + | chr7.4:79050638-79050657 | MS.gene98420:intron | 25.0% |
| AAAGTTCAAAATTGTGTGCA+GGG | + | chr7.4:79051598-79051617 | MS.gene98420:intron | 30.0% | |
| AAATCCCTCTAATATTGAAC+AGG | + | chr7.4:79052777-79052796 | MS.gene98420:intron | 30.0% | |
| AAGAAGAAATCTCTCATTAC+AGG | + | chr7.4:79053229-79053248 | MS.gene98420:intron | 30.0% | |
| AATAGAAACCTTTGACATTC+CGG | - | chr7.4:79050887-79050906 | None:intergenic | 30.0% | |
| AATATCGAACATAGCTAACA+TGG | + | chr7.4:79051304-79051323 | MS.gene98420:CDS | 30.0% | |
| AATCCCTCTAATATTGAACA+GGG | + | chr7.4:79052778-79052797 | MS.gene98420:intron | 30.0% | |
| AATCTTAGCAGTCAAGAAAA+TGG | - | chr7.4:79053457-79053476 | None:intergenic | 30.0% | |
| ACCAATTTGGATATTTACTC+AGG | + | chr7.4:79049971-79049990 | MS.gene98420:intron | 30.0% | |
| ACCATAAGATAAATCCAGAA+AGG | - | chr7.4:79051415-79051434 | None:intergenic | 30.0% | |
| AGTAACTCACTAAAATGTGT+GGG | + | chr7.4:79052189-79052208 | MS.gene98420:intron | 30.0% | |
| ATAAGATAAATCCAGAAAGG+AGG | - | chr7.4:79051412-79051431 | None:intergenic | 30.0% | |
| CAATCTCATTAGTAAAAGAG+CGG | - | chr7.4:79051918-79051937 | None:intergenic | 30.0% | |
| CATTCAAATACAGCAGAAAA+AGG | - | chr7.4:79052353-79052372 | None:intergenic | 30.0% | |
| CCAATTTGGATATTTACTCA+GGG | + | chr7.4:79049972-79049991 | MS.gene98420:intron | 30.0% | |
| CTTCCAGGTTTAACAAATAT+CGG | + | chr7.4:79050337-79050356 | MS.gene98420:intron | 30.0% | |
| CTTCTTTCAGTTTCAGATAA+TGG | + | chr7.4:79048830-79048849 | MS.gene98420:CDS | 30.0% | |
| CTTGTCTTAATGAAATTTCC+AGG | + | chr7.4:79051798-79051817 | MS.gene98420:intron | 30.0% | |
| GAAAATGTGAATTCACTTGT+TGG | + | chr7.4:79053659-79053678 | MS.gene98420:CDS | 30.0% | |
| GAATTACACGTAAGTAAAAG+GGG | - | chr7.4:79053586-79053605 | None:intergenic | 30.0% | |
| GCTTATTTGAACTTATGATC+TGG | - | chr7.4:79051181-79051200 | None:intergenic | 30.0% | |
| GGAGCATAATGTAATTAAGT+TGG | - | chr7.4:79049653-79049672 | None:intergenic | 30.0% | |
| GTTTAACAAATATCGGGATT+TGG | + | chr7.4:79050344-79050363 | MS.gene98420:intron | 30.0% | |
| TAAAGTTCAAAATTGTGTGC+AGG | + | chr7.4:79051597-79051616 | MS.gene98420:intron | 30.0% | |
| TAGTAACTCACTAAAATGTG+TGG | + | chr7.4:79052188-79052207 | MS.gene98420:intron | 30.0% | |
| TATTATGCTTTCAGTGACTT+TGG | + | chr7.4:79051867-79051886 | MS.gene98420:CDS | 30.0% | |
| TCCTTTCTGGATTTATCTTA+TGG | + | chr7.4:79051411-79051430 | MS.gene98420:CDS | 30.0% | |
| TCTGATTGATGCATAAACTT+TGG | - | chr7.4:79051342-79051361 | None:intergenic | 30.0% | |
| TGAAATCACTCATGTGATTT+CGG | + | chr7.4:79049440-79049459 | MS.gene98420:intron | 30.0% | |
| TGAACTTCTTAATGTCAGTT+AGG | + | chr7.4:79052711-79052730 | MS.gene98420:intron | 30.0% | |
| TTACAGTGTATATTAGTGTG+CGG | - | chr7.4:79051684-79051703 | None:intergenic | 30.0% | |
| TTATTCACTTTGTGCATGTT+TGG | + | chr7.4:79049348-79049367 | MS.gene98420:intron | 30.0% | |
| TTCCAGGTTTAACAAATATC+GGG | + | chr7.4:79050338-79050357 | MS.gene98420:intron | 30.0% | |
| TTTACTAAATTGGTGGAAAG+GGG | + | chr7.4:79052575-79052594 | MS.gene98420:intron | 30.0% | |
| ! | AGTTCCTTATGTTTTCCTTA+TGG | + | chr7.4:79050179-79050198 | MS.gene98420:intron | 30.0% |
| ! | CTAAATTAGCTCTCTCAAAT+TGG | + | chr7.4:79049536-79049555 | MS.gene98420:intron | 30.0% |
| ! | CTGTTGGAATTTTACTGTTT+TGG | + | chr7.4:79050146-79050165 | MS.gene98420:intron | 30.0% |
| ! | CTTGTTTCTTTAATAATGGG+AGG | + | chr7.4:79052539-79052558 | MS.gene98420:intron | 30.0% |
| ! | GGTTTAGTTCAAAAATTGGA+GGG | - | chr7.4:79052848-79052867 | None:intergenic | 30.0% |
| ! | GTTTAGTTCAAAAATTGGAG+GGG | - | chr7.4:79052847-79052866 | None:intergenic | 30.0% |
| ! | TGAAGCTGGATTTAAGTTAA+GGG | + | chr7.4:79050469-79050488 | MS.gene98420:intron | 30.0% |
| ! | TGGTTTAGTTCAAAAATTGG+AGG | - | chr7.4:79052849-79052868 | None:intergenic | 30.0% |
| ! | TGTTATTTGGACATAAGAAC+TGG | - | chr7.4:79049837-79049856 | None:intergenic | 30.0% |
| ! | TGTTGAGAATTTCGGTTTTT+GGG | + | chr7.4:79050396-79050415 | MS.gene98420:intron | 30.0% |
| ! | TTCTTGACTGCTAAGATTTT+AGG | + | chr7.4:79053459-79053478 | MS.gene98420:intron | 30.0% |
| ! | TTGAAGCTGGATTTAAGTTA+AGG | + | chr7.4:79050468-79050487 | MS.gene98420:intron | 30.0% |
| ! | TTGCACTTTTCCTGAATATT+TGG | + | chr7.4:79052486-79052505 | MS.gene98420:intron | 30.0% |
| ! | TTGTTGAGAATTTCGGTTTT+TGG | + | chr7.4:79050395-79050414 | MS.gene98420:intron | 30.0% |
| ! | TTTAATAATGGGAGGGAAAT+AGG | + | chr7.4:79052547-79052566 | MS.gene98420:intron | 30.0% |
| ! | TTTTCTGCTGTATTTGAATG+TGG | + | chr7.4:79052353-79052372 | MS.gene98420:intron | 30.0% |
| !! | AAGATTTTAGGAACTACCAT+TGG | + | chr7.4:79053471-79053490 | MS.gene98420:intron | 30.0% |
| !! | ATTTACTTGGTGTTTGATTG+AGG | - | chr7.4:79052905-79052924 | None:intergenic | 30.0% |
| !! | GTTCTCTTTTCTGTTTTGTT+AGG | + | chr7.4:79050766-79050785 | MS.gene98420:intron | 30.0% |
| !! | GTTTTTGACATATTTGAAGC+TGG | + | chr7.4:79050455-79050474 | MS.gene98420:intron | 30.0% |
| !! | TAGAACTTGTTTCAGTTTTC+TGG | + | chr7.4:79050251-79050270 | MS.gene98420:intron | 30.0% |
| !!! | GATATTTTTGGAGACCAATT+TGG | + | chr7.4:79049958-79049977 | MS.gene98420:intron | 30.0% |
| !!! | TGGCCAATTATTTTGATGAT+TGG | + | chr7.4:79052007-79052026 | MS.gene98420:CDS | 30.0% |
| AAAAAAGTGATCCTGAGCAT+AGG | - | chr7.4:79051947-79051966 | None:intergenic | 35.0% | |
| AATATAGTGTGTCCAGAATG+TGG | - | chr7.4:79052240-79052259 | None:intergenic | 35.0% | |
| AGAGCCATAAGGAAAACATA+AGG | - | chr7.4:79050186-79050205 | None:intergenic | 35.0% | |
| AGCTATGTTCGATATTCTGA+TGG | - | chr7.4:79051300-79051319 | None:intergenic | 35.0% | |
| AGTAAGCTGCAAATAGCTTA+TGG | + | chr7.4:79051095-79051114 | MS.gene98420:intron | 35.0% | |
| ATACAATCAATGTGTCTGTG+TGG | - | chr7.4:79049246-79049265 | None:intergenic | 35.0% | |
| ATAGAAACCTTTGACATTCC+GGG | - | chr7.4:79050886-79050905 | None:intergenic | 35.0% | |
| ATATTTGTCTGCCATCAGTT+TGG | + | chr7.4:79053024-79053043 | MS.gene98420:intron | 35.0% | |
| CATATCACATACACAAACAC+TGG | - | chr7.4:79049310-79049329 | None:intergenic | 35.0% | |
| CCCTGAGTAAATATCCAAAT+TGG | - | chr7.4:79049975-79049994 | None:intergenic | 35.0% | |
| CGCAAAAGCTGAAACAATTA+TGG | - | chr7.4:79053169-79053188 | None:intergenic | 35.0% | |
| GATGTGATCACTAATGTGAT+TGG | + | chr7.4:79051967-79051986 | MS.gene98420:CDS | 35.0% | |
| GGAAGTTGTGTAGATACAAA+AGG | + | chr7.4:79050365-79050384 | MS.gene98420:intron | 35.0% | |
| GTTTATGCATCAATCAGAAG+TGG | + | chr7.4:79051344-79051363 | MS.gene98420:CDS | 35.0% | |
| TAAGACACATTGACACTGTT+CGG | + | chr7.4:79053747-79053766 | MS.gene98420:CDS | 35.0% | |
| TAATACCTTCAGCTTGACTA+AGG | + | chr7.4:79051822-79051841 | MS.gene98420:CDS | 35.0% | |
| TACAAGGATAGAGTCTCATA+AGG | - | chr7.4:79052981-79053000 | None:intergenic | 35.0% | |
| TACAGTGTATATTAGTGTGC+GGG | - | chr7.4:79051683-79051702 | None:intergenic | 35.0% | |
| TATGATGCACAAAGTTTGAG+AGG | - | chr7.4:79053309-79053328 | None:intergenic | 35.0% | |
| TCAACGATGAATGAGATTAC+TGG | - | chr7.4:79053126-79053145 | None:intergenic | 35.0% | |
| TCACTAAAATGTGTGGGTAT+GGG | + | chr7.4:79052195-79052214 | MS.gene98420:intron | 35.0% | |
| TCGTTGACAACTGTAATTAC+TGG | + | chr7.4:79053139-79053158 | MS.gene98420:intron | 35.0% | |
| TGGTGTTTGATTGAGGAAAA+TGG | - | chr7.4:79052898-79052917 | None:intergenic | 35.0% | |
| TGTTTGATTGAGGAAAATGG+AGG | - | chr7.4:79052895-79052914 | None:intergenic | 35.0% | |
| TTTATCAAAGGCCAAACTGA+TGG | - | chr7.4:79053038-79053057 | None:intergenic | 35.0% | |
| TTTGACTCTATAGTCTCGTT+TGG | - | chr7.4:79051208-79051227 | None:intergenic | 35.0% | |
| ! | ATCCCGATATTTGTTAAACC+TGG | - | chr7.4:79050343-79050362 | None:intergenic | 35.0% |
| ! | CAAGGTAAGTTGCTTTGATT+TGG | + | chr7.4:79049394-79049413 | MS.gene98420:intron | 35.0% |
| ! | GTAAGTTTCTGAAGATACTC+TGG | - | chr7.4:79053698-79053717 | None:intergenic | 35.0% |
| ! | GTTTGGACTCTGCTATTTAA+CGG | + | chr7.4:79050711-79050730 | MS.gene98420:intron | 35.0% |
| ! | TTAATTTGAGGACTGACCAA+TGG | - | chr7.4:79051503-79051522 | None:intergenic | 35.0% |
| ! | TTTCTTGCTATGGAGTTGTT+TGG | + | chr7.4:79050648-79050667 | MS.gene98420:intron | 35.0% |
| !! | CTGTGAGTTTGTTGAAATCA+AGG | + | chr7.4:79049376-79049395 | MS.gene98420:intron | 35.0% |
| !! | TCTAGGGCTGCAAATAATTT+TGG | + | chr7.4:79051651-79051670 | MS.gene98420:CDS | 35.0% |
| !! | TTGTTTTGTATCAATGGCTG+TGG | + | chr7.4:79050105-79050124 | MS.gene98420:intron | 35.0% |
| !! | TTTCCAATAGGGTACTGATA+CGG | - | chr7.4:79051467-79051486 | None:intergenic | 35.0% |
| !!! | TCTAGTTCACTTTTTCTTCC+AGG | + | chr7.4:79050322-79050341 | MS.gene98420:intron | 35.0% |
| AAATTGTGTGCAGGGAATTC+TGG | + | chr7.4:79051606-79051625 | MS.gene98420:intron | 40.0% | |
| AAGACACATTGACACTGTTC+GGG | + | chr7.4:79053748-79053767 | MS.gene98420:CDS | 40.0% | |
| AATCCGTATCAGTACCCTAT+TGG | + | chr7.4:79051461-79051480 | MS.gene98420:CDS | 40.0% | |
| AATGGCTGTGGTTGATTATG+AGG | + | chr7.4:79050117-79050136 | MS.gene98420:intron | 40.0% | |
| ACTGTTCGGGCATATACATT+CGG | + | chr7.4:79053761-79053780 | MS.gene98420:CDS | 40.0% | |
| AGAAACTTACATACCTCTGC+TGG | + | chr7.4:79053708-79053727 | MS.gene98420:CDS | 40.0% | |
| AGAGAAAGCTCTTCTTCGTT+AGG | - | chr7.4:79048812-79048831 | None:intergenic | 40.0% | |
| AGTACCCTATTGGAAAGAAG+CGG | + | chr7.4:79051471-79051490 | MS.gene98420:CDS | 40.0% | |
| AGTTCAAAAATTGGAGGGGA+AGG | - | chr7.4:79052843-79052862 | None:intergenic | 40.0% | |
| ATATCATGAGCCTCTTGCAA+AGG | - | chr7.4:79053833-79053852 | None:intergenic | 40.0% | |
| ATATGGGTAGAATTGGGTAC+AGG | + | chr7.4:79052161-79052180 | MS.gene98420:intron | 40.0% | |
| ATCCACTTTAGACTCTCTTC+TGG | + | chr7.4:79051385-79051404 | MS.gene98420:CDS | 40.0% | |
| ATGCAGTGTTGTCAAATAGC+AGG | + | chr7.4:79053328-79053347 | MS.gene98420:intron | 40.0% | |
| ATTCATTGCCATCTATCCCA+AGG | - | chr7.4:79053083-79053102 | None:intergenic | 40.0% | |
| ATTGAGGAAAATGGAGGAGA+GGG | - | chr7.4:79052889-79052908 | None:intergenic | 40.0% | |
| CAGTCATGAATACCAGAAGA+GGG | - | chr7.4:79048926-79048945 | None:intergenic | 40.0% | |
| CTCACTAAAATGTGTGGGTA+TGG | + | chr7.4:79052194-79052213 | MS.gene98420:intron | 40.0% | |
| CTCTATAGTCTCGTTTGGAT+TGG | - | chr7.4:79051203-79051222 | None:intergenic | 40.0% | |
| CTTACAATGATAGCACCAAC+AGG | - | chr7.4:79052039-79052058 | None:intergenic | 40.0% | |
| CTTTGTACACAATTCGCACA+TGG | + | chr7.4:79053621-79053640 | MS.gene98420:CDS | 40.0% | |
| GAGTATCCACAATTGTATGC+AGG | + | chr7.4:79051238-79051257 | MS.gene98420:intron | 40.0% | |
| GATTATGAGGAATGTGCTGT+TGG | + | chr7.4:79050130-79050149 | MS.gene98420:intron | 40.0% | |
| GTTCAAAAATTGGAGGGGAA+GGG | - | chr7.4:79052842-79052861 | None:intergenic | 40.0% | |
| GTTTGTATCAACTAAGCCTC+AGG | - | chr7.4:79051725-79051744 | None:intergenic | 40.0% | |
| TAGTCTAAAAGTTTCGCCTC+TGG | - | chr7.4:79050519-79050538 | None:intergenic | 40.0% | |
| TATCCACAATTGTATGCAGG+AGG | + | chr7.4:79051241-79051260 | MS.gene98420:intron | 40.0% | |
| TCTGGTATTCATGACTGCTA+TGG | + | chr7.4:79048929-79048948 | MS.gene98420:CDS | 40.0% | |
| TGAATACCAGAAGAGGGTTT+AGG | - | chr7.4:79048920-79048939 | None:intergenic | 40.0% | |
| TGATGTAGCTACATTTCCTG+AGG | + | chr7.4:79051706-79051725 | MS.gene98420:intron | 40.0% | |
| TGGCCCTGTTCAATATTAGA+GGG | - | chr7.4:79052784-79052803 | None:intergenic | 40.0% | |
| TGTAATTCTTTCACTGCAGC+TGG | + | chr7.4:79053598-79053617 | MS.gene98420:intron | 40.0% | |
| TTACACGTAAGTAAAAGGGG+TGG | - | chr7.4:79053583-79053602 | None:intergenic | 40.0% | |
| TTGCAAGAGGCTCATGATAT+CGG | + | chr7.4:79053833-79053852 | MS.gene98420:CDS | 40.0% | |
| TTGGCCCTGTTCAATATTAG+AGG | - | chr7.4:79052785-79052804 | None:intergenic | 40.0% | |
| TTGTTCCTTAGTCAAGCTGA+AGG | - | chr7.4:79051830-79051849 | None:intergenic | 40.0% | |
| ! | AATCCCTCCTCTCTCAATTT+TGG | - | chr7.4:79052804-79052823 | None:intergenic | 40.0% |
| ! | CAGTTTCAGATAATGGTGAC+CGG | + | chr7.4:79048837-79048856 | MS.gene98420:CDS | 40.0% |
| ! | GACTCTGCTATTTAACGGAA+AGG | + | chr7.4:79050716-79050735 | MS.gene98420:intron | 40.0% |
| ! | GAGGCGAAACTTTTAGACTA+TGG | + | chr7.4:79050519-79050538 | MS.gene98420:intron | 40.0% |
| ! | GTCTAAAGTGGATGCAATGA+TGG | - | chr7.4:79051378-79051397 | None:intergenic | 40.0% |
| ! | TGGTCTAATTGCTGCACTTT+TGG | + | chr7.4:79051987-79052006 | MS.gene98420:CDS | 40.0% |
| ! | TTTCTGGAAGATGCTATCGA+TGG | + | chr7.4:79050267-79050286 | MS.gene98420:intron | 40.0% |
| !! | ATACGGATTTGGTGTTTGCA+TGG | - | chr7.4:79051450-79051469 | None:intergenic | 40.0% |
| !! | ATAGGGTACTGATACGGATT+TGG | - | chr7.4:79051461-79051480 | None:intergenic | 40.0% |
| !! | TCAAGCTGAAGGTATTATCC+TGG | - | chr7.4:79051819-79051838 | None:intergenic | 40.0% |
| !!! | CACTAGTTCGCTAGTTTTCA+CGG | + | chr7.4:79049805-79049824 | MS.gene98420:intron | 40.0% |
| !!! | CGGTTTTTGGGTAGATATCT+TGG | + | chr7.4:79050408-79050427 | MS.gene98420:intron | 40.0% |
| AAACCTTTGACATTCCGGGA+AGG | - | chr7.4:79050882-79050901 | None:intergenic | 45.0% | |
| AAAGAAGCGGATGCAACCAT+TGG | + | chr7.4:79051484-79051503 | MS.gene98420:CDS | 45.0% | |
| AAATGGAGGAGAGGGAAAGA+TGG | - | chr7.4:79052881-79052900 | None:intergenic | 45.0% | |
| AACACTTGGCCAACCCAAAT+GGG | + | chr7.4:79049617-79049636 | MS.gene98420:intron | 45.0% | |
| AACAGGGCCAAAATTGAGAG+AGG | + | chr7.4:79052794-79052813 | MS.gene98420:intron | 45.0% | |
| AAGACACCTAAACCCTCTTC+TGG | + | chr7.4:79048911-79048930 | MS.gene98420:CDS | 45.0% | |
| AAGTGGATGCAATGATGGCA+AGG | - | chr7.4:79051373-79051392 | None:intergenic | 45.0% | |
| AGCACTTGTGAAACCGTTTG+AGG | - | chr7.4:79051154-79051173 | None:intergenic | 45.0% | |
| AGTGGATGCAATGATGGCAA+GGG | - | chr7.4:79051372-79051391 | None:intergenic | 45.0% | |
| CAATGTGTCTTACAGCCTTG+TGG | - | chr7.4:79053739-79053758 | None:intergenic | 45.0% | |
| CAATTGTGGATACTCAGCCA+AGG | - | chr7.4:79051233-79051252 | None:intergenic | 45.0% | |
| CACATGGTCAATGACAGTGT+TGG | + | chr7.4:79053637-79053656 | MS.gene98420:CDS | 45.0% | |
| CATGACTGCTATGGTGTTCT+TGG | + | chr7.4:79048938-79048957 | MS.gene98420:CDS | 45.0% | |
| CTAAATTGGTGGAAAGGGGT+TGG | + | chr7.4:79052579-79052598 | MS.gene98420:intron | 45.0% | |
| GACTATAGAGTCAAACGCCT+TGG | + | chr7.4:79051213-79051232 | MS.gene98420:intron | 45.0% | |
| GATGATTGGATGGATCCTGT+TGG | + | chr7.4:79052021-79052040 | MS.gene98420:CDS | 45.0% | |
| GATTGAGGAAAATGGAGGAG+AGG | - | chr7.4:79052890-79052909 | None:intergenic | 45.0% | |
| GCACTTACACTTCTGATCGA+AGG | + | chr7.4:79049176-79049195 | MS.gene98420:intron | 45.0% | |
| GCACTTGTGAAACCGTTTGA+GGG | - | chr7.4:79051153-79051172 | None:intergenic | 45.0% | |
| GCAGTCATGAATACCAGAAG+AGG | - | chr7.4:79048927-79048946 | None:intergenic | 45.0% | |
| GCATCCGCTTCTTTCCAATA+GGG | - | chr7.4:79051478-79051497 | None:intergenic | 45.0% | |
| GCTTGAAGGCTTTACCGAAA+TGG | + | chr7.4:79050834-79050853 | MS.gene98420:CDS | 45.0% | |
| GTCCAGAAGAGAGTCTAAAG+TGG | - | chr7.4:79051390-79051409 | None:intergenic | 45.0% | |
| TCAGTGCTCAAAAGAGCCAA+TGG | - | chr7.4:79053490-79053509 | None:intergenic | 45.0% | |
| TGCAAGAGGCTCATGATATC+GGG | + | chr7.4:79053834-79053853 | MS.gene98420:CDS | 45.0% | |
| TGCATCCGCTTCTTTCCAAT+AGG | - | chr7.4:79051479-79051498 | None:intergenic | 45.0% | |
| TGGTAAGTCCGAACCCATTT+GGG | - | chr7.4:79049633-79049652 | None:intergenic | 45.0% | |
| TTGGAGTATGCTCCTTCTCA+AGG | - | chr7.4:79049586-79049605 | None:intergenic | 45.0% | |
| TTGGTAAGTCCGAACCCATT+TGG | - | chr7.4:79049634-79049653 | None:intergenic | 45.0% | |
| TTTCCATAGGCTCCCTCAAA+CGG | + | chr7.4:79051138-79051157 | MS.gene98420:intron | 45.0% | |
| TTTCCTTCCCGGAATGTCAA+AGG | + | chr7.4:79050876-79050895 | MS.gene98420:CDS | 45.0% | |
| ! | CTCTGCTAAGGCATCCATTT+CGG | - | chr7.4:79050851-79050870 | None:intergenic | 45.0% |
| ! | TTGAGAAGGAGCATACTCCA+AGG | + | chr7.4:79049585-79049604 | MS.gene98420:intron | 45.0% |
| !! | ATAGCAGCGCTTTAGAGCTA+CGG | + | chr7.4:79053352-79053371 | MS.gene98420:intron | 45.0% |
| !! | CACTTCTGATCGAAGGTGTT+CGG | + | chr7.4:79049183-79049202 | MS.gene98420:intron | 45.0% |
| !! | CATGCTTTTCTAGAGACCAG+AGG | + | chr7.4:79050500-79050519 | MS.gene98420:intron | 45.0% |
| !! | GGGAAAGATGGAAAGTGTCT+TGG | - | chr7.4:79052869-79052888 | None:intergenic | 45.0% |
| !! | ATAAAAAATAAAATAAAAAG+AGG | - | chr7.4:79050006-79050025 | None:intergenic | 5.0% |
| !!! | TTTAATTTCAAATTTATTTA+CGG | + | chr7.4:79049489-79049508 | MS.gene98420:intron | 5.0% |
| AAACCGTTTGAGGGAGCCTA+TGG | - | chr7.4:79051144-79051163 | None:intergenic | 50.0% | |
| AAGGAAACCACGCTCTGCTA+AGG | - | chr7.4:79050863-79050882 | None:intergenic | 50.0% | |
| AAGTCCGAACCCATTTGGGT+TGG | - | chr7.4:79049629-79049648 | None:intergenic | 50.0% | |
| AGCAGACATGCCTTTGCAAG+AGG | + | chr7.4:79053820-79053839 | MS.gene98420:CDS | 50.0% | |
| AGGAGCGAGATAAGTTAGCC+AGG | + | chr7.4:79051261-79051280 | MS.gene98420:CDS | 50.0% | |
| AGGGCCAAAATTGAGAGAGG+AGG | + | chr7.4:79052797-79052816 | MS.gene98420:intron | 50.0% | |
| ATAATGGTGACCGGTCATGG+CGG | + | chr7.4:79048846-79048865 | MS.gene98420:CDS | 50.0% | |
| ATGCTCCTTCTCAAGGTCTC+AGG | - | chr7.4:79049579-79049598 | None:intergenic | 50.0% | |
| CAACACTTGGCCAACCCAAA+TGG | + | chr7.4:79049616-79049635 | MS.gene98420:intron | 50.0% | |
| CGGCTCTCACTACTTTGTTG+AGG | + | chr7.4:79053781-79053800 | MS.gene98420:CDS | 50.0% | |
| GAATGTGCTTGTGCATGCTC+AGG | - | chr7.4:79053941-79053960 | None:intergenic | 50.0% | |
| GATTGTGAAGGCCTATGCTC+AGG | + | chr7.4:79051933-79051952 | MS.gene98420:CDS | 50.0% | |
| GCAAGAGGCTCATGATATCG+GGG | + | chr7.4:79053835-79053854 | MS.gene98420:CDS | 50.0% | |
| GCTCCTCCTGCATACAATTG+TGG | - | chr7.4:79051247-79051266 | None:intergenic | 50.0% | |
| GGGCCAAAATTGAGAGAGGA+GGG | + | chr7.4:79052798-79052817 | MS.gene98420:intron | 50.0% | |
| GTATCCACTGTGCCACATTC+TGG | + | chr7.4:79052225-79052244 | MS.gene98420:intron | 50.0% | |
| GTCTCAGGTTCGATTCTCCT+CGG | - | chr7.4:79049564-79049583 | None:intergenic | 50.0% | |
| TCGAACCTGAGACCTTGAGA+AGG | + | chr7.4:79049571-79049590 | MS.gene98420:intron | 50.0% | |
| TCTCTTCTGGACCTCCTTTC+TGG | + | chr7.4:79051398-79051417 | MS.gene98420:CDS | 50.0% | |
| TCTGGTGTTTGCCTCTGTCA+TGG | + | chr7.4:79051624-79051643 | MS.gene98420:CDS | 50.0% | |
| TGCTGAGTACTATCAGCAGC+AGG | + | chr7.4:79050804-79050823 | MS.gene98420:CDS | 50.0% | |
| ! | ACAAAAGCACGCTCGATCTC+AGG | - | chr7.4:79053890-79053909 | None:intergenic | 50.0% |
| ! | CAGATAATGGTGACCGGTCA+TGG | + | chr7.4:79048843-79048862 | MS.gene98420:CDS | 50.0% |
| ! | CAGCAGGTTGAAGTGCTTGA+AGG | + | chr7.4:79050820-79050839 | MS.gene98420:CDS | 50.0% |
| ! | TCTTGCAAAGGCATGTCTGC+TGG | - | chr7.4:79053821-79053840 | None:intergenic | 50.0% |
| ! | TGACTAAGGAACAAGAGCGC+TGG | + | chr7.4:79051836-79051855 | MS.gene98420:CDS | 50.0% |
| ! | TGTGTCTTACAGCCTTGTGG+TGG | - | chr7.4:79053736-79053755 | None:intergenic | 50.0% |
| ! | TTGGCCAACCCAAATGGGTT+CGG | + | chr7.4:79049622-79049641 | MS.gene98420:intron | 50.0% |
| !! | CATTTGGGTTGGCCAAGTGT+TGG | - | chr7.4:79049618-79049637 | None:intergenic | 50.0% |
| !! | GACTAAGGAACAAGAGCGCT+GGG | + | chr7.4:79051837-79051856 | MS.gene98420:CDS | 50.0% |
| !! | GCTTTAGAGCTACGGCGTAA+TGG | + | chr7.4:79053360-79053379 | MS.gene98420:intron | 50.0% |
| !! | GTGATGATGGAGGGTTCCTT+TGG | + | chr7.4:79052635-79052654 | MS.gene98420:intron | 50.0% |
| !! | GTTGGTGTTGGCAGTGTTGA+AGG | + | chr7.4:79052597-79052616 | MS.gene98420:intron | 50.0% |
| !! | TGTGTGGTGGTGATGATGGA+GGG | + | chr7.4:79052626-79052645 | MS.gene98420:intron | 50.0% |
| AATTGGAGGGGAAGGGAACG+AGG | - | chr7.4:79052835-79052854 | None:intergenic | 55.0% | |
| ACATCATGCACTCGTGGCGA+GGG | + | chr7.4:79052675-79052694 | MS.gene98420:intron | 55.0% | |
| ATGGATGCCTTAGCAGAGCG+TGG | + | chr7.4:79050853-79050872 | MS.gene98420:CDS | 55.0% | |
| ATTGGAGGGGAAGGGAACGA+GGG | - | chr7.4:79052834-79052853 | None:intergenic | 55.0% | |
| CAAGGTCTCACGCCAACACT+TGG | + | chr7.4:79049603-79049622 | MS.gene98420:intron | 55.0% | |
| CCTCTGTCATGGCGACTCTA+GGG | + | chr7.4:79051635-79051654 | MS.gene98420:CDS | 55.0% | |
| CGAAGTTCAACCGCCATGAC+CGG | - | chr7.4:79048859-79048878 | None:intergenic | 55.0% | |
| CTCTCCTACCTCCATGCCAA+AGG | - | chr7.4:79052654-79052673 | None:intergenic | 55.0% | |
| CTTTGGCATGGAGGTAGGAG+AGG | + | chr7.4:79052652-79052671 | MS.gene98420:intron | 55.0% | |
| GAGAGGACATCATGCACTCG+TGG | + | chr7.4:79052669-79052688 | MS.gene98420:intron | 55.0% | |
| GATGGAGGGTTCCTTTGGCA+TGG | + | chr7.4:79052640-79052659 | MS.gene98420:intron | 55.0% | |
| GCTCTCTCAAATTGGCACCG+AGG | + | chr7.4:79049544-79049563 | MS.gene98420:intron | 55.0% | |
| GGTTCCTTTGGCATGGAGGT+AGG | + | chr7.4:79052647-79052666 | MS.gene98420:intron | 55.0% | |
| GTGTCCAGAATGTGGCACAG+TGG | - | chr7.4:79052232-79052251 | None:intergenic | 55.0% | |
| GTGTTGAAGGCTGGTGTGTG+TGG | + | chr7.4:79052610-79052629 | MS.gene98420:intron | 55.0% | |
| TTGAAGGCTGGTGTGTGTGG+TGG | + | chr7.4:79052613-79052632 | MS.gene98420:intron | 55.0% | |
| ! | CACCGTCTCCACCATTTTCC+CGG | - | chr7.4:79048783-79048802 | None:intergenic | 55.0% |
| ! | GACCGGGAAAATGGTGGAGA+CGG | + | chr7.4:79048778-79048797 | MS.gene98420:CDS | 55.0% |
| ! | GGTGTGTGTGGTGGTGATGA+TGG | + | chr7.4:79052622-79052641 | MS.gene98420:intron | 55.0% |
| ! | GTGTTGGCAGTGTTGAAGGC+TGG | + | chr7.4:79052601-79052620 | MS.gene98420:intron | 55.0% |
| !! | CAAGTGTTGGCGTGAGACCT+TGG | - | chr7.4:79049605-79049624 | None:intergenic | 55.0% |
| !! | GAACAAGAGCGCTGGGTTGT+GGG | + | chr7.4:79051844-79051863 | MS.gene98420:CDS | 55.0% |
| !! | GTGTGTGGTGGTGATGATGG+AGG | + | chr7.4:79052625-79052644 | MS.gene98420:intron | 55.0% |
| !! | TGGTGGAAAGGGGTTGGTGT+TGG | + | chr7.4:79052585-79052604 | MS.gene98420:intron | 55.0% |
| CCCTAGAGTCGCCATGACAG+AGG | - | chr7.4:79051638-79051657 | None:intergenic | 60.0% | |
| CCTCTGCTGGAACCACCACA+AGG | + | chr7.4:79053721-79053740 | MS.gene98420:CDS | 60.0% | |
| CCTTGTGGTGGTTCCAGCAG+AGG | - | chr7.4:79053724-79053743 | None:intergenic | 60.0% | |
| GACATCATGCACTCGTGGCG+AGG | + | chr7.4:79052674-79052693 | MS.gene98420:intron | 60.0% | |
| GATGGCAAACGTCTCGCTCC+TGG | - | chr7.4:79051282-79051301 | None:intergenic | 60.0% | |
| GCAGAGCGTGGTTTCCTTCC+CGG | + | chr7.4:79050865-79050884 | MS.gene98420:CDS | 60.0% | |
| GCCTCTGTCATGGCGACTCT+AGG | + | chr7.4:79051634-79051653 | MS.gene98420:CDS | 60.0% | |
| GGAGGGTTCCTTTGGCATGG+AGG | + | chr7.4:79052643-79052662 | MS.gene98420:intron | 60.0% | |
| TGCACTCGTGGCGAGGGTAA+AGG | + | chr7.4:79052681-79052700 | MS.gene98420:intron | 60.0% | |
| TTGGAGGGGAAGGGAACGAG+GGG | - | chr7.4:79052833-79052852 | None:intergenic | 60.0% | |
| ! | CGGGAAAATGGTGGAGACGG+TGG | + | chr7.4:79048781-79048800 | MS.gene98420:CDS | 60.0% |
| !! | GGAACAAGAGCGCTGGGTTG+TGG | + | chr7.4:79051843-79051862 | MS.gene98420:CDS | 60.0% |
| TGGAGGGGAAGGGAACGAGG+GGG | - | chr7.4:79052832-79052851 | None:intergenic | 65.0% | |
| GGAGGGGAAGGGAACGAGGG+GGG | - | chr7.4:79052831-79052850 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 79048776 | 79053964 | 79048776 | ID=MS.gene98420 |
| chr7.4 | mRNA | 79048776 | 79053964 | 79048776 | ID=MS.gene98420.t1;Parent=MS.gene98420 |
| chr7.4 | exon | 79048776 | 79048959 | 79048776 | ID=MS.gene98420.t1.exon1;Parent=MS.gene98420.t1 |
| chr7.4 | CDS | 79048776 | 79048959 | 79048776 | ID=cds.MS.gene98420.t1;Parent=MS.gene98420.t1 |
| chr7.4 | exon | 79050788 | 79050897 | 79050788 | ID=MS.gene98420.t1.exon2;Parent=MS.gene98420.t1 |
| chr7.4 | CDS | 79050788 | 79050897 | 79050788 | ID=cds.MS.gene98420.t1;Parent=MS.gene98420.t1 |
| chr7.4 | exon | 79051260 | 79051505 | 79051260 | ID=MS.gene98420.t1.exon3;Parent=MS.gene98420.t1 |
| chr7.4 | CDS | 79051260 | 79051505 | 79051260 | ID=cds.MS.gene98420.t1;Parent=MS.gene98420.t1 |
| chr7.4 | exon | 79051619 | 79051699 | 79051619 | ID=MS.gene98420.t1.exon4;Parent=MS.gene98420.t1 |
| chr7.4 | CDS | 79051619 | 79051699 | 79051619 | ID=cds.MS.gene98420.t1;Parent=MS.gene98420.t1 |
| chr7.4 | exon | 79051820 | 79052053 | 79051820 | ID=MS.gene98420.t1.exon5;Parent=MS.gene98420.t1 |
| chr7.4 | CDS | 79051820 | 79052053 | 79051820 | ID=cds.MS.gene98420.t1;Parent=MS.gene98420.t1 |
| chr7.4 | exon | 79053617 | 79053964 | 79053617 | ID=MS.gene98420.t1.exon6;Parent=MS.gene98420.t1 |
| chr7.4 | CDS | 79053617 | 79053964 | 79053617 | ID=cds.MS.gene98420.t1;Parent=MS.gene98420.t1 |
| Gene Sequence |
| Protein sequence |
