Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061402.t1 | XP_003621788.1 | 96.8 | 400 | 4 | 1 | 1 | 391 | 1 | 400 | 2.50E-213 | 751.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061402.t1 | O80632 | 81.0 | 394 | 66 | 2 | 5 | 390 | 1 | 393 | 1.7e-178 | 626.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061402.t1 | G7KVN9 | 96.8 | 400 | 4 | 1 | 1 | 391 | 1 | 400 | 1.8e-213 | 751.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049369 | MS.gene061402 | 0.815343 | 9.70E-52 | -1.69E-46 |
| MS.gene049396 | MS.gene061402 | 0.861027 | 1.37E-63 | -1.69E-46 |
| MS.gene050216 | MS.gene061402 | 0.814034 | 1.89E-51 | -1.69E-46 |
| MS.gene050380 | MS.gene061402 | -0.829239 | 5.75E-55 | -1.69E-46 |
| MS.gene050381 | MS.gene061402 | -0.816082 | 6.64E-52 | -1.69E-46 |
| MS.gene050499 | MS.gene061402 | 0.825901 | 3.64E-54 | -1.69E-46 |
| MS.gene050502 | MS.gene061402 | 0.833378 | 5.52E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene061402 | 0.811371 | 7.24E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene061402 | 0.814167 | 1.77E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene061402 | 0.818042 | 2.41E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene061402 | 0.806918 | 6.51E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene061402 | 0.803826 | 2.90E-49 | -1.69E-46 |
| MS.gene053018 | MS.gene061402 | 0.821508 | 3.89E-53 | -1.69E-46 |
| MS.gene053505 | MS.gene061402 | 0.808807 | 2.58E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene061402 | 0.830368 | 3.05E-55 | -1.69E-46 |
| MS.gene053626 | MS.gene061402 | 0.837864 | 4.04E-57 | -1.69E-46 |
| MS.gene053916 | MS.gene061402 | 0.819727 | 9.98E-53 | -1.69E-46 |
| MS.gene054003 | MS.gene061402 | 0.802372 | 5.79E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene061402 | -0.814422 | 1.55E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene061402 | 0.807924 | 3.98E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene061402 | -0.818118 | 2.32E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene061402 | 0.804148 | 2.48E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene061402 | 0.81202 | 5.23E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene061402 | 0.807306 | 5.39E-50 | -1.69E-46 |
| MS.gene055959 | MS.gene061402 | -0.818595 | 1.81E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene061402 | 0.804714 | 1.89E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene061402 | 0.849532 | 3.04E-60 | -1.69E-46 |
| MS.gene056448 | MS.gene061402 | 0.819457 | 1.15E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene061402 | 0.805756 | 1.14E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene061402 | 0.804346 | 2.26E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene061402 | 0.840862 | 6.73E-58 | -1.69E-46 |
| MS.gene058093 | MS.gene061402 | -0.811751 | 5.99E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene061402 | 0.805759 | 1.14E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene061402 | 0.803634 | 3.17E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene061402 | -0.80858 | 2.89E-50 | -1.69E-46 |
| MS.gene058173 | MS.gene061402 | -0.805443 | 1.33E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene061402 | -0.810277 | 1.25E-50 | -1.69E-46 |
| MS.gene058179 | MS.gene061402 | -0.832754 | 7.89E-56 | -1.69E-46 |
| MS.gene058180 | MS.gene061402 | -0.823189 | 1.58E-53 | -1.69E-46 |
| MS.gene058459 | MS.gene061402 | 0.817442 | 3.29E-52 | -1.69E-46 |
| MS.gene058840 | MS.gene061402 | -0.834119 | 3.60E-56 | -1.69E-46 |
| MS.gene059037 | MS.gene061402 | -0.840358 | 9.13E-58 | -1.69E-46 |
| MS.gene059038 | MS.gene061402 | -0.807729 | 4.38E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene061402 | 0.838453 | 2.85E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene061402 | 0.865152 | 7.26E-65 | -1.69E-46 |
| MS.gene059368 | MS.gene061402 | 0.849927 | 2.36E-60 | -1.69E-46 |
| MS.gene059517 | MS.gene061402 | 0.818838 | 1.59E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene061402 | 0.822316 | 2.53E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene061402 | 0.801119 | 1.05E-48 | -1.69E-46 |
| MS.gene059807 | MS.gene061402 | 0.801326 | 9.49E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene061402 | 0.805522 | 1.28E-49 | -1.69E-46 |
| MS.gene059944 | MS.gene061402 | -0.810056 | 1.39E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene061402 | 0.848568 | 5.64E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene061402 | 0.817769 | 2.78E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene061402 | 0.800954 | 1.13E-48 | -1.69E-46 |
| MS.gene06097 | MS.gene061402 | 0.841518 | 4.53E-58 | -1.69E-46 |
| MS.gene061041 | MS.gene061402 | 0.814146 | 1.79E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene061402 | MS.gene038979 | PPI |
| MS.gene045727 | MS.gene061402 | PPI |
| MS.gene061402 | MS.gene008424 | PPI |
| MS.gene061402 | MS.gene62500 | PPI |
| MS.gene061402 | MS.gene36106 | PPI |
| MS.gene061402 | MS.gene78686 | PPI |
| MS.gene061402 | MS.gene068947 | PPI |
| MS.gene061402 | MS.gene42745 | PPI |
| MS.gene061402 | MS.gene069718 | PPI |
| MS.gene53865 | MS.gene061402 | PPI |
| MS.gene061402 | MS.gene05112 | PPI |
| MS.gene049605 | MS.gene061402 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061402.t1 | MTR_7g022890 | 96.750 | 400 | 4 | 1 | 1 | 391 | 1 | 400 | 0.0 | 800 |
| MS.gene061402.t1 | MTR_7g022890 | 99.115 | 339 | 3 | 0 | 53 | 391 | 9 | 347 | 0.0 | 702 |
| MS.gene061402.t1 | MTR_8g046550 | 61.053 | 380 | 133 | 4 | 21 | 386 | 12 | 390 | 6.56e-163 | 462 |
| MS.gene061402.t1 | MTR_2g064405 | 62.299 | 374 | 126 | 5 | 25 | 386 | 19 | 389 | 8.11e-160 | 454 |
| MS.gene061402.t1 | MTR_2g064405 | 66.773 | 313 | 102 | 2 | 75 | 386 | 1 | 312 | 2.63e-147 | 420 |
| MS.gene061402.t1 | MTR_3g080090 | 58.108 | 370 | 140 | 4 | 29 | 388 | 33 | 397 | 2.58e-144 | 416 |
| MS.gene061402.t1 | MTR_3g062610 | 57.012 | 328 | 136 | 2 | 60 | 387 | 72 | 394 | 3.88e-130 | 380 |
| MS.gene061402.t1 | MTR_5g075680 | 56.402 | 328 | 138 | 3 | 60 | 387 | 12 | 334 | 1.86e-126 | 368 |
| MS.gene061402.t1 | MTR_5g075680 | 56.402 | 328 | 138 | 3 | 60 | 387 | 65 | 387 | 3.95e-126 | 369 |
| MS.gene061402.t1 | MTR_3g062610 | 49.612 | 258 | 120 | 3 | 60 | 317 | 72 | 319 | 3.44e-83 | 257 |
| MS.gene061402.t1 | MTR_5g075680 | 48.425 | 254 | 123 | 3 | 43 | 296 | 52 | 297 | 5.00e-77 | 241 |
| MS.gene061402.t1 | MTR_5g075680 | 45.500 | 200 | 101 | 3 | 43 | 242 | 52 | 243 | 3.37e-51 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061402.t1 | AT2G39450 | 80.759 | 395 | 67 | 2 | 5 | 391 | 1 | 394 | 0.0 | 595 |
| MS.gene061402.t1 | AT1G79520 | 62.005 | 379 | 123 | 5 | 24 | 386 | 25 | 398 | 4.50e-164 | 466 |
| MS.gene061402.t1 | AT1G16310 | 60.881 | 386 | 138 | 5 | 13 | 386 | 41 | 425 | 8.92e-164 | 466 |
| MS.gene061402.t1 | AT1G79520 | 66.667 | 336 | 110 | 2 | 52 | 386 | 11 | 345 | 3.56e-163 | 461 |
| MS.gene061402.t1 | AT1G79520 | 66.667 | 336 | 110 | 2 | 52 | 386 | 11 | 345 | 3.56e-163 | 461 |
| MS.gene061402.t1 | AT1G79520 | 60.724 | 387 | 127 | 5 | 24 | 386 | 25 | 410 | 1.54e-162 | 462 |
| MS.gene061402.t1 | AT1G16310 | 66.773 | 313 | 102 | 2 | 75 | 386 | 1 | 312 | 2.06e-151 | 430 |
| MS.gene061402.t1 | AT3G58060 | 54.545 | 341 | 151 | 2 | 51 | 387 | 62 | 402 | 1.94e-126 | 370 |
| MS.gene061402.t1 | AT3G58060 | 54.545 | 341 | 151 | 2 | 51 | 387 | 62 | 402 | 1.94e-126 | 370 |
Find 91 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTTCTGGACCTCCTTTC+TGG | 0.043075 | 7.1:+76002583 | MS.gene061402:CDS |
| TCCTTTCTGGATTTATCTTA+TGG | 0.146709 | 7.1:+76002596 | MS.gene061402:CDS |
| TCTAGGGCTGCAAATAATTT+TGG | 0.184356 | 7.1:+76002836 | MS.gene061402:CDS |
| CTTCTTTCAGTTTCTGATAA+TGG | 0.222068 | 7.1:+75999999 | MS.gene061402:CDS |
| TTGCAAGAGGCTCATGATAT+TGG | 0.244926 | 7.1:+76005019 | MS.gene061402:CDS |
| CATCCAATCATCAAAATAAT+TGG | 0.258777 | 7.1:-76003195 | None:intergenic |
| TGGTCTAATTGCTGCACTTT+TGG | 0.273816 | 7.1:+76003172 | MS.gene061402:CDS |
| TGCAAGAGGCTCATGATATT+GGG | 0.283768 | 7.1:+76005020 | MS.gene061402:CDS |
| GCAGAGCGTGGTTTCCTTCC+CGG | 0.286014 | 7.1:+76002034 | MS.gene061402:CDS |
| AATAGAAACCTTTGACATTC+CGG | 0.314411 | 7.1:-76002053 | None:intergenic |
| AAATTGTGTGCAGGGAATTC+TGG | 0.316840 | 7.1:+76002791 | MS.gene061402:intron |
| GCATGCACAAGCACATTCTT+AGG | 0.345663 | 7.1:+76005129 | MS.gene061402:CDS |
| CTCTGCTAAGGCATCCATTT+CGG | 0.359363 | 7.1:-76002017 | None:intergenic |
| GGAACAAGAGCGCTGGGTTG+TGG | 0.362336 | 7.1:+76003028 | MS.gene061402:CDS |
| AATCCGTATCAGTACCCTAT+TGG | 0.365036 | 7.1:+76002646 | MS.gene061402:CDS |
| ATAGAAACCTTTGACATTCC+GGG | 0.389148 | 7.1:-76002052 | None:intergenic |
| GCCTCTGTCATGGCGACTCT+AGG | 0.392667 | 7.1:+76002819 | MS.gene061402:CDS |
| AAGACTCCTAAACCCTCTTC+TGG | 0.398983 | 7.1:+76000080 | MS.gene061402:CDS |
| TGAATACCAGAAGAGGGTTT+AGG | 0.399590 | 7.1:-76000086 | None:intergenic |
| GCTTGAAGGCTTTACCGAAA+TGG | 0.410063 | 7.1:+76002003 | MS.gene061402:CDS |
| AGTGAAAGCTCTTCTTCGTT+AGG | 0.410273 | 7.1:-75999978 | None:intergenic |
| TGCATCCGCTTCTTTCCAAT+AGG | 0.419106 | 7.1:-76002661 | None:intergenic |
| TAAGACACATTGACACTGTT+CGG | 0.424020 | 7.1:+76004933 | MS.gene061402:CDS |
| ATAGGGTACTGATACGGATT+TGG | 0.428517 | 7.1:-76002643 | None:intergenic |
| GCATCCGCTTCTTTCCAATA+GGG | 0.430128 | 7.1:-76002660 | None:intergenic |
| CAGCAGGTTGAAGTGCTTGA+AGG | 0.440105 | 7.1:+76001989 | MS.gene061402:CDS |
| GATGTGATCACTAATGTGAT+TGG | 0.442921 | 7.1:+76003152 | MS.gene061402:CDS |
| TCTGATTGATGCATAAACTT+TGG | 0.446170 | 7.1:-76002524 | None:intergenic |
| CTGATAATGGTGACCGGTCA+TGG | 0.447887 | 7.1:+76000012 | MS.gene061402:CDS |
| ATCCACTTTAGACTCTCTTC+TGG | 0.448253 | 7.1:+76002570 | MS.gene061402:CDS |
| TATTATGCTTTCAGTGACTT+TGG | 0.454551 | 7.1:+76003052 | MS.gene061402:CDS |
| GAAAATGTGAATTCACTTGT+TGG | 0.461809 | 7.1:+76004845 | MS.gene061402:CDS |
| GATGGCAAACGTCTCGCTCC+TGG | 0.461933 | 7.1:-76002464 | None:intergenic |
| ACAAAAGCACGCTCGATCTC+AGG | 0.463499 | 7.1:-76005073 | None:intergenic |
| GAACAAGAGCGCTGGGTTGT+GGG | 0.464087 | 7.1:+76003029 | MS.gene061402:CDS |
| AAGACACATTGACACTGTTC+GGG | 0.476544 | 7.1:+76004934 | MS.gene061402:CDS |
| AGAAACTTACATACCTCTGC+TGG | 0.477384 | 7.1:+76004894 | MS.gene061402:CDS |
| GAATGTGCTTGTGCATGCTC+AGG | 0.480448 | 7.1:-76005124 | None:intergenic |
| GTCTAAAGTGGATGCAATGA+TGG | 0.499685 | 7.1:-76002560 | None:intergenic |
| GACTAAGGAACAAGAGCGCT+GGG | 0.500550 | 7.1:+76003022 | MS.gene061402:CDS |
| AGGAGCGAGATAAGTTAGCC+AGG | 0.501817 | 7.1:+76002446 | MS.gene061402:CDS |
| TCTGGTGTTTGCCTCTGTCA+TGG | 0.505859 | 7.1:+76002809 | MS.gene061402:CDS |
| CCTCTGTCATGGCGACTCTA+GGG | 0.513170 | 7.1:+76002820 | MS.gene061402:CDS |
| GTAAGTTTCTGAAGATACTC+TGG | 0.516377 | 7.1:-76004881 | None:intergenic |
| TAATACCTTCAGCTTGACTA+AGG | 0.517479 | 7.1:+76003007 | MS.gene061402:CDS |
| CTTACAATGATAGCACCAAC+AGG | 0.517600 | 7.1:-76003221 | None:intergenic |
| TCTTGCAAAGGCATGTCTGC+TGG | 0.522402 | 7.1:-76005004 | None:intergenic |
| ACTGTTCGGGCATATACATT+CGG | 0.522461 | 7.1:+76004947 | MS.gene061402:CDS |
| CGAAGTTCAACCGCCATGAC+CGG | 0.524564 | 7.1:-76000025 | None:intergenic |
| TGACTAAGGAACAAGAGCGC+TGG | 0.528993 | 7.1:+76003021 | MS.gene061402:CDS |
| AAGGAAACCACGCTCTGCTA+AGG | 0.531828 | 7.1:-76002029 | None:intergenic |
| TTTCCAATAGGGTACTGATA+CGG | 0.535905 | 7.1:-76002649 | None:intergenic |
| CAGTTTCTGATAATGGTGAC+CGG | 0.537897 | 7.1:+76000006 | MS.gene061402:CDS |
| TTTCCTTCCCGGAATGTCAA+AGG | 0.540211 | 7.1:+76002045 | MS.gene061402:CDS |
| AGCTATGTTCGATATTCTGA+TGG | 0.545423 | 7.1:-76002482 | None:intergenic |
| TACAGTGTATATTAGTGTGC+GGG | 0.552886 | 7.1:-76002865 | None:intergenic |
| GACCGGGAAAATGGTGGAGA+CGG | 0.557316 | 7.1:+75999947 | MS.gene061402:CDS |
| TGCTGAGTACTATCAGCAGC+AGG | 0.563087 | 7.1:+76001973 | MS.gene061402:CDS |
| AGCAGACATGCCTTTGCAAG+AGG | 0.566228 | 7.1:+76005006 | MS.gene061402:CDS |
| GATTGTGAAGGCCTATGCTC+AGG | 0.566596 | 7.1:+76003118 | MS.gene061402:CDS |
| CGGCTCTCACTACTTTGTCG+AGG | 0.568299 | 7.1:+76004967 | MS.gene061402:CDS |
| CCTTGTGGTGGTTCCAGCAG+AGG | 0.569864 | 7.1:-76004907 | None:intergenic |
| ATACGGATTTGGTGTTTGCA+TGG | 0.571306 | 7.1:-76002632 | None:intergenic |
| AAGTGGATGCAATGATGGCA+AGG | 0.572995 | 7.1:-76002555 | None:intergenic |
| AAAGAAGCGGATGCAACCAT+TGG | 0.577177 | 7.1:+76002669 | MS.gene061402:CDS |
| ACCATAAGATAAATCCAGAA+AGG | 0.578791 | 7.1:-76002597 | None:intergenic |
| GATGATTGGATGGATCCTGT+TGG | 0.588009 | 7.1:+76003206 | MS.gene061402:CDS |
| GCAAGAGGCTCATGATATTG+GGG | 0.588631 | 7.1:+76005021 | MS.gene061402:CDS |
| GCAGTCATGAATACCAGAAG+AGG | 0.589632 | 7.1:-76000093 | None:intergenic |
| GTCCAGAAGAGAGTCTAAAG+TGG | 0.592680 | 7.1:-76002572 | None:intergenic |
| GTTTATGCATCAATCAGAAG+TGG | 0.593927 | 7.1:+76002529 | MS.gene061402:CDS |
| ATATCATGAGCCTCTTGCAA+AGG | 0.600551 | 7.1:-76005016 | None:intergenic |
| CGGGAAAATGGTGGAGACGG+TGG | 0.602898 | 7.1:+75999950 | MS.gene061402:CDS |
| TAGAATGACCGGGAAAATGG+TGG | 0.604598 | 7.1:+75999941 | None:intergenic |
| TTGTTCCTTAGTCAAGCTGA+AGG | 0.609444 | 7.1:-76003012 | None:intergenic |
| AGTGGATGCAATGATGGCAA+GGG | 0.615205 | 7.1:-76002554 | None:intergenic |
| CAATGTGTCTTACAGCCTTG+TGG | 0.618083 | 7.1:-76004922 | None:intergenic |
| CCCTAGAGTCGCCATGACAG+AGG | 0.619378 | 7.1:-76002820 | None:intergenic |
| CTTTGTACACAATTCGCACA+TGG | 0.622183 | 7.1:+76004807 | MS.gene061402:CDS |
| CACATGGTCAATGACAGTGT+TGG | 0.625243 | 7.1:+76004823 | MS.gene061402:CDS |
| AATATCGAACATAGCTAACA+TGG | 0.635618 | 7.1:+76002489 | MS.gene061402:CDS |
| TGTGTCTTACAGCCTTGTGG+TGG | 0.637411 | 7.1:-76004919 | None:intergenic |
| ATAAGATAAATCCAGAAAGG+AGG | 0.638365 | 7.1:-76002594 | None:intergenic |
| CAGTCATGAATACCAGAAGA+GGG | 0.642062 | 7.1:-76000092 | None:intergenic |
| CCTCTGCTGGAACCACCACA+AGG | 0.649186 | 7.1:+76004907 | MS.gene061402:CDS |
| ATGGATGCCTTAGCAGAGCG+TGG | 0.649962 | 7.1:+76002022 | MS.gene061402:CDS |
| AAACCTTTGACATTCCGGGA+AGG | 0.650213 | 7.1:-76002048 | None:intergenic |
| TTACAGTGTATATTAGTGTG+CGG | 0.655284 | 7.1:-76002866 | None:intergenic |
| CAATCTCATTAGTAAAAGAG+CGG | 0.658060 | 7.1:-76003100 | None:intergenic |
| AGTACCCTATTGGAAAGAAG+CGG | 0.658390 | 7.1:+76002656 | MS.gene061402:CDS |
| ATAATGGTGACCGGTCATGG+CGG | 0.812917 | 7.1:+76000015 | MS.gene061402:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAGAAAAATAAATAAAA+AGG | - | chr7.1:76004125-76004144 | None:intergenic | 10.0% |
| !! | GTTAAAAAAAAAAAATTGAA+TGG | - | chr7.1:76003630-76003649 | None:intergenic | 10.0% |
| !!! | TATTTATTTTTCTTTGTTAA+GGG | + | chr7.1:76004128-76004147 | MS.gene061402:intron | 10.0% |
| !!! | TTATTTATTTTTCTTTGTTA+AGG | + | chr7.1:76004127-76004146 | MS.gene061402:intron | 10.0% |
| !! | AATCTGAGAAAATAAATTAA+CGG | - | chr7.1:76000439-76000458 | None:intergenic | 15.0% |
| !! | ATAGGATTAATTTACTAAAT+TGG | + | chr7.1:76003751-76003770 | MS.gene061402:intron | 15.0% |
| !! | AACTAAAATGTGTAGATATT+AGG | - | chr7.1:76003459-76003478 | None:intergenic | 20.0% |
| !! | AAGAATTACACATAAGTAAA+AGG | - | chr7.1:76004774-76004793 | None:intergenic | 20.0% |
| !! | AAGTATTATAGATTCACATA+AGG | - | chr7.1:76003257-76003276 | None:intergenic | 20.0% |
| !! | AGAATTACACATAAGTAAAA+GGG | - | chr7.1:76004773-76004792 | None:intergenic | 20.0% |
| !! | ATACAATTTCAAAGATTCTA+TGG | - | chr7.1:76000253-76000272 | None:intergenic | 20.0% |
| !! | ATGATTCCTTTCTTATATAT+GGG | + | chr7.1:76003330-76003349 | MS.gene061402:intron | 20.0% |
| !! | ATTATTAAAGAAACAAGAAG+GGG | - | chr7.1:76003722-76003741 | None:intergenic | 20.0% |
| !! | ATTGACATTCGTATTTAATT+AGG | - | chr7.1:76003289-76003308 | None:intergenic | 20.0% |
| !! | ATTTAAACTTGAATGATCTT+TGG | + | chr7.1:76003590-76003609 | MS.gene061402:intron | 20.0% |
| !! | CAATTACCTATAAATTAATG+AGG | - | chr7.1:76002954-76002973 | None:intergenic | 20.0% |
| !! | CATTATTAAAGAAACAAGAA+GGG | - | chr7.1:76003723-76003742 | None:intergenic | 20.0% |
| !! | CTCATTAATTTATAGGTAAT+TGG | + | chr7.1:76002952-76002971 | MS.gene061402:intron | 20.0% |
| !! | GTAAATAAATGCAATGAATA+AGG | - | chr7.1:76003516-76003535 | None:intergenic | 20.0% |
| !! | TATTATTAACAGCTGTTATT+TGG | - | chr7.1:76001019-76001038 | None:intergenic | 20.0% |
| !! | TATTTACAATCATTTAACAC+AGG | - | chr7.1:76004444-76004463 | None:intergenic | 20.0% |
| !!! | ATAATAGCAGAAATGATTTT+TGG | + | chr7.1:76000848-76000867 | MS.gene061402:intron | 20.0% |
| !!! | CTTCTTGTTTCTTTAATAAT+GGG | + | chr7.1:76003722-76003741 | MS.gene061402:intron | 20.0% |
| !!! | TACAATTTGTTTTGTATCAA+TGG | + | chr7.1:76001268-76001287 | MS.gene061402:intron | 20.0% |
| !!! | TCAAACAGAATATTAATTTG+AGG | - | chr7.1:76002700-76002719 | None:intergenic | 20.0% |
| !!! | TCTTGTTTTAGTTCAAAAAT+TGG | - | chr7.1:76004042-76004061 | None:intergenic | 20.0% |
| ! | AAAATGTTCTTTGATGTATC+TGG | + | chr7.1:76000298-76000317 | MS.gene061402:intron | 25.0% |
| ! | AACTTATTGCACTTAAATCA+CGG | - | chr7.1:76001739-76001758 | None:intergenic | 25.0% |
| ! | AATATTAGAGGGATTTGAAA+TGG | - | chr7.1:76003965-76003984 | None:intergenic | 25.0% |
| ! | AATCTTAGCAGTCAAAAAAA+TGG | - | chr7.1:76004643-76004662 | None:intergenic | 25.0% |
| ! | AATTTACTAAATTGGTGGAA+AGG | + | chr7.1:76003759-76003778 | MS.gene061402:intron | 25.0% |
| ! | ACAGCTGTTAATAATAAAGT+AGG | + | chr7.1:76001023-76001042 | MS.gene061402:intron | 25.0% |
| ! | AGCTGTTAATAATAAAGTAG+GGG | + | chr7.1:76001025-76001044 | MS.gene061402:intron | 25.0% |
| ! | ATGTAATAAGATGTTTCCAT+AGG | + | chr7.1:76002310-76002329 | MS.gene061402:intron | 25.0% |
| ! | ATTCTACCCATATATAAGAA+AGG | - | chr7.1:76003339-76003358 | None:intergenic | 25.0% |
| ! | ATTTACTAAATTGGTGGAAA+GGG | + | chr7.1:76003760-76003779 | MS.gene061402:intron | 25.0% |
| ! | CAGCTGTTAATAATAAAGTA+GGG | + | chr7.1:76001024-76001043 | MS.gene061402:intron | 25.0% |
| ! | CATATATAAGAAAGGAATCA+TGG | - | chr7.1:76003331-76003350 | None:intergenic | 25.0% |
| ! | CATCCAATCATCAAAATAAT+TGG | - | chr7.1:76003198-76003217 | None:intergenic | 25.0% |
| ! | CATGATTCCTTTCTTATATA+TGG | + | chr7.1:76003329-76003348 | MS.gene061402:intron | 25.0% |
| ! | CATTTCTGCTATTATTTGTA+GGG | - | chr7.1:76000843-76000862 | None:intergenic | 25.0% |
| ! | CCATTATTAAAGAAACAAGA+AGG | - | chr7.1:76003724-76003743 | None:intergenic | 25.0% |
| ! | CTATATTGAACCAAATATTC+AGG | - | chr7.1:76003685-76003704 | None:intergenic | 25.0% |
| ! | GAATTACACATAAGTAAAAG+GGG | - | chr7.1:76004772-76004791 | None:intergenic | 25.0% |
| ! | GATATGTAACAACTATAAGA+TGG | - | chr7.1:76004739-76004758 | None:intergenic | 25.0% |
| ! | GGATTAATTTACTAAATTGG+TGG | + | chr7.1:76003754-76003773 | MS.gene061402:intron | 25.0% |
| ! | TCATTTCTGCTATTATTTGT+AGG | - | chr7.1:76000844-76000863 | None:intergenic | 25.0% |
| ! | TCGTATTTAATTAGGCTATA+AGG | - | chr7.1:76003281-76003300 | None:intergenic | 25.0% |
| ! | TCTTATATATGGGTAGAATT+GGG | + | chr7.1:76003340-76003359 | MS.gene061402:intron | 25.0% |
| ! | TGAATATATAAAGAGCCATA+AGG | - | chr7.1:76001366-76001385 | None:intergenic | 25.0% |
| ! | TTAGCTTCTTAACAAAAAGT+TGG | - | chr7.1:76000689-76000708 | None:intergenic | 25.0% |
| ! | TTCTTATATATGGGTAGAAT+TGG | + | chr7.1:76003339-76003358 | MS.gene061402:intron | 25.0% |
| ! | TTTAGATCTAGAGAAGATAA+AGG | - | chr7.1:76002088-76002107 | None:intergenic | 25.0% |
| !! | AAATTGGTCTCCAAAAATAT+CGG | - | chr7.1:76001128-76001147 | None:intergenic | 25.0% |
| !! | AACAGTTAAAAGTAGTTTGT+TGG | + | chr7.1:76002927-76002946 | MS.gene061402:intron | 25.0% |
| !! | ATTAAGTTGTTTAGCTAAAG+AGG | - | chr7.1:76002121-76002140 | None:intergenic | 25.0% |
| !! | CCTTCTTGTTTCTTTAATAA+TGG | + | chr7.1:76003721-76003740 | MS.gene061402:intron | 25.0% |
| !! | CTGAATATTTGGTTCAATAT+AGG | + | chr7.1:76003683-76003702 | MS.gene061402:intron | 25.0% |
| !! | CTTTCTATTCTAAGTTTGTT+TGG | + | chr7.1:76001863-76001882 | MS.gene061402:intron | 25.0% |
| !! | GATGTTTTCTTATGAAATCA+TGG | + | chr7.1:76002245-76002264 | MS.gene061402:intron | 25.0% |
| !! | TCAAAGAACATTTTGTAATG+TGG | - | chr7.1:76000292-76000311 | None:intergenic | 25.0% |
| !! | TTGTTTCTTTAATAATGGGA+GGG | + | chr7.1:76003726-76003745 | MS.gene061402:intron | 25.0% |
| !! | TTTTACTAATGAGATTGTGA+AGG | + | chr7.1:76003106-76003125 | MS.gene061402:CDS | 25.0% |
| !!! | AAAAGGAACATTGATTTACT+TGG | - | chr7.1:76004108-76004127 | None:intergenic | 25.0% |
| !!! | CAATTATTTTGATGATTGGA+TGG | + | chr7.1:76003196-76003215 | MS.gene061402:CDS | 25.0% |
| !!! | GTTTTAGTTCAAAAATTGGA+GGG | - | chr7.1:76004038-76004057 | None:intergenic | 25.0% |
| !!! | TAGAAAGTGTTATCAAATAG+CGG | + | chr7.1:76004594-76004613 | MS.gene061402:intron | 25.0% |
| !!! | TGTTTTAGTTCAAAAATTGG+AGG | - | chr7.1:76004039-76004058 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTGTTGAGAATTT+CGG | + | chr7.1:76001557-76001576 | MS.gene061402:intron | 25.0% |
| !!! | TTTTAGTTCAAAAATTGGAG+GGG | - | chr7.1:76004037-76004056 | None:intergenic | 25.0% |
| !!! | TTTTGCTTTATTTCTTGCTA+TGG | + | chr7.1:76001807-76001826 | MS.gene061402:intron | 25.0% |
| !!! | TTTTTGACTGCTAAGATTTT+AGG | + | chr7.1:76004645-76004664 | MS.gene061402:intron | 25.0% |
| AAAGTTCAAAATTGTGTGCA+GGG | + | chr7.1:76002783-76002802 | MS.gene061402:intron | 30.0% | |
| AAATCCCTCTAATATTGAAC+AGG | + | chr7.1:76003969-76003988 | MS.gene061402:intron | 30.0% | |
| AAGAAGAAATCTCTCATTAC+AGG | + | chr7.1:76004415-76004434 | MS.gene061402:intron | 30.0% | |
| AATAGAAACCTTTGACATTC+CGG | - | chr7.1:76002056-76002075 | None:intergenic | 30.0% | |
| AATATCGAACATAGCTAACA+TGG | + | chr7.1:76002489-76002508 | MS.gene061402:CDS | 30.0% | |
| AATCCCTCTAATATTGAACA+GGG | + | chr7.1:76003970-76003989 | MS.gene061402:intron | 30.0% | |
| ACCAATTTGGATATTTACTC+AGG | + | chr7.1:76001140-76001159 | MS.gene061402:intron | 30.0% | |
| ACCATAAGATAAATCCAGAA+AGG | - | chr7.1:76002600-76002619 | None:intergenic | 30.0% | |
| AGTAACTCACTAAAATGTGT+GGG | + | chr7.1:76003374-76003393 | MS.gene061402:intron | 30.0% | |
| ATAAGATAAATCCAGAAAGG+AGG | - | chr7.1:76002597-76002616 | None:intergenic | 30.0% | |
| ATATTTGTCTGCTATCAGTT+TGG | + | chr7.1:76004210-76004229 | MS.gene061402:intron | 30.0% | |
| ATGTAACAACTATAAGATGG+CGG | - | chr7.1:76004736-76004755 | None:intergenic | 30.0% | |
| CAAATATATCCTTTCCAACT+AGG | - | chr7.1:76004197-76004216 | None:intergenic | 30.0% | |
| CAATCTCATTAGTAAAAGAG+CGG | - | chr7.1:76003103-76003122 | None:intergenic | 30.0% | |
| CATTCAAATACAGCAGAAAA+AGG | - | chr7.1:76003538-76003557 | None:intergenic | 30.0% | |
| CCAATTTGGATATTTACTCA+GGG | + | chr7.1:76001141-76001160 | MS.gene061402:intron | 30.0% | |
| CTTCCAGGTTTAACAAATAT+CGG | + | chr7.1:76001506-76001525 | MS.gene061402:intron | 30.0% | |
| CTTCTTTCAGTTTCTGATAA+TGG | + | chr7.1:75999999-76000018 | MS.gene061402:CDS | 30.0% | |
| CTTGTCTTAATGAAATTTCC+AGG | + | chr7.1:76002983-76003002 | MS.gene061402:intron | 30.0% | |
| GAAAATGTGAATTCACTTGT+TGG | + | chr7.1:76004845-76004864 | MS.gene061402:CDS | 30.0% | |
| GCTTATTTGAACTTATGATC+TGG | - | chr7.1:76002366-76002385 | None:intergenic | 30.0% | |
| GGAGCATAATGTAATTAAGT+TGG | - | chr7.1:76000822-76000841 | None:intergenic | 30.0% | |
| GTTGGACCTCATTAATTTAT+AGG | + | chr7.1:76002945-76002964 | MS.gene061402:intron | 30.0% | |
| GTTTAACAAATATCGGGATT+TGG | + | chr7.1:76001513-76001532 | MS.gene061402:intron | 30.0% | |
| GTTTAGCTAAAGAGGATTAT+TGG | - | chr7.1:76002113-76002132 | None:intergenic | 30.0% | |
| TAAAGTTCAAAATTGTGTGC+AGG | + | chr7.1:76002782-76002801 | MS.gene061402:intron | 30.0% | |
| TAGTAACTCACTAAAATGTG+TGG | + | chr7.1:76003373-76003392 | MS.gene061402:intron | 30.0% | |
| TATTATGCTTTCAGTGACTT+TGG | + | chr7.1:76003052-76003071 | MS.gene061402:CDS | 30.0% | |
| TCCTTTCTGGATTTATCTTA+TGG | + | chr7.1:76002596-76002615 | MS.gene061402:CDS | 30.0% | |
| TCTGATTGATGCATAAACTT+TGG | - | chr7.1:76002527-76002546 | None:intergenic | 30.0% | |
| TGAAATCACTCATGTGATTT+CGG | + | chr7.1:76000609-76000628 | MS.gene061402:intron | 30.0% | |
| TGAACTTCTTAATGTCAGTT+AGG | + | chr7.1:76003903-76003922 | MS.gene061402:intron | 30.0% | |
| TTACAGTGTATATTAGTGTG+CGG | - | chr7.1:76002869-76002888 | None:intergenic | 30.0% | |
| TTATCAAATAGCAGGTATAG+CGG | + | chr7.1:76004522-76004541 | MS.gene061402:intron | 30.0% | |
| TTATTCACTTTGTGCATGTT+TGG | + | chr7.1:76000517-76000536 | MS.gene061402:intron | 30.0% | |
| TTCCAGGTTTAACAAATATC+GGG | + | chr7.1:76001507-76001526 | MS.gene061402:intron | 30.0% | |
| TTTACTAAATTGGTGGAAAG+GGG | + | chr7.1:76003761-76003780 | MS.gene061402:intron | 30.0% | |
| ! | AAAATCCCTCCTCTAAATTT+TGG | - | chr7.1:76003996-76004015 | None:intergenic | 30.0% |
| ! | AGTTCCTTATGTTTTCCTTA+TGG | + | chr7.1:76001348-76001367 | MS.gene061402:intron | 30.0% |
| ! | CTAAATTAGCTCTCTCAAAT+TGG | + | chr7.1:76000705-76000724 | MS.gene061402:intron | 30.0% |
| ! | CTGTTGGAATTTTACTGTTT+TGG | + | chr7.1:76001315-76001334 | MS.gene061402:intron | 30.0% |
| ! | CTTGTTTCTTTAATAATGGG+AGG | + | chr7.1:76003725-76003744 | MS.gene061402:intron | 30.0% |
| ! | TGAAGCTGGATTTAAGTTAA+GGG | + | chr7.1:76001638-76001657 | MS.gene061402:intron | 30.0% |
| ! | TGTTATTTGGACATAAGAAC+TGG | - | chr7.1:76001006-76001025 | None:intergenic | 30.0% |
| ! | TGTTGAGAATTTCGGTTTTT+GGG | + | chr7.1:76001565-76001584 | MS.gene061402:intron | 30.0% |
| ! | TTGAAGCTGGATTTAAGTTA+AGG | + | chr7.1:76001637-76001656 | MS.gene061402:intron | 30.0% |
| ! | TTGATCTGTTCCGATATTTT+TGG | + | chr7.1:76001115-76001134 | MS.gene061402:intron | 30.0% |
| ! | TTGCACTTTTCCTGAATATT+TGG | + | chr7.1:76003672-76003691 | MS.gene061402:intron | 30.0% |
| ! | TTGTTGAGAATTTCGGTTTT+TGG | + | chr7.1:76001564-76001583 | MS.gene061402:intron | 30.0% |
| ! | TTTAATAATGGGAGGGAAAT+AGG | + | chr7.1:76003733-76003752 | MS.gene061402:intron | 30.0% |
| ! | TTTTCTGCTGTATTTGAATG+TGG | + | chr7.1:76003538-76003557 | MS.gene061402:intron | 30.0% |
| !! | AAGATTTTAGGAACTACCAT+TGG | + | chr7.1:76004657-76004676 | MS.gene061402:intron | 30.0% |
| !! | ATTTACTTGGTGTTTGATTG+AGG | - | chr7.1:76004095-76004114 | None:intergenic | 30.0% |
| !! | GTTCTCTTTTCTGTTTTGTT+AGG | + | chr7.1:76001935-76001954 | MS.gene061402:intron | 30.0% |
| !! | GTTTTTGACATATTTGAAGC+TGG | + | chr7.1:76001624-76001643 | MS.gene061402:intron | 30.0% |
| !! | TAGAACTTGTTTCAGTTTTC+TGG | + | chr7.1:76001420-76001439 | MS.gene061402:intron | 30.0% |
| !!! | GATATTTTTGGAGACCAATT+TGG | + | chr7.1:76001127-76001146 | MS.gene061402:intron | 30.0% |
| !!! | TGGCCAATTATTTTGATGAT+TGG | + | chr7.1:76003192-76003211 | MS.gene061402:CDS | 30.0% |
| AAAAAAGTGATCCTGAGCAT+AGG | - | chr7.1:76003132-76003151 | None:intergenic | 35.0% | |
| AATATAGTGTGTCCAGAATG+TGG | - | chr7.1:76003425-76003444 | None:intergenic | 35.0% | |
| AGAGCCATAAGGAAAACATA+AGG | - | chr7.1:76001355-76001374 | None:intergenic | 35.0% | |
| AGCTATGTTCGATATTCTGA+TGG | - | chr7.1:76002485-76002504 | None:intergenic | 35.0% | |
| AGGAATGAGATTCATTCCTT+GGG | + | chr7.1:76004250-76004269 | MS.gene061402:intron | 35.0% | |
| AGTAAGCTGCAAATAGCTTA+TGG | + | chr7.1:76002280-76002299 | MS.gene061402:intron | 35.0% | |
| ATACAATCAATGTGTCTGTG+TGG | - | chr7.1:76000415-76000434 | None:intergenic | 35.0% | |
| ATAGAAACCTTTGACATTCC+GGG | - | chr7.1:76002055-76002074 | None:intergenic | 35.0% | |
| ATGCAGTGTTATCAAATAGC+AGG | + | chr7.1:76004514-76004533 | MS.gene061402:intron | 35.0% | |
| CCCTGAGTAAATATCCAAAT+TGG | - | chr7.1:76001144-76001163 | None:intergenic | 35.0% | |
| CTATCCTTGTAATACCTAGT+TGG | + | chr7.1:76004180-76004199 | MS.gene061402:intron | 35.0% | |
| CTTGTAATACCTAGTTGGAA+AGG | + | chr7.1:76004185-76004204 | MS.gene061402:intron | 35.0% | |
| CTTTCCAACTAGGTATTACA+AGG | - | chr7.1:76004187-76004206 | None:intergenic | 35.0% | |
| GATGTGATCACTAATGTGAT+TGG | + | chr7.1:76003152-76003171 | MS.gene061402:CDS | 35.0% | |
| GGAAGTTGTGTAGATACAAA+AGG | + | chr7.1:76001534-76001553 | MS.gene061402:intron | 35.0% | |
| GTTTATGCATCAATCAGAAG+TGG | + | chr7.1:76002529-76002548 | MS.gene061402:CDS | 35.0% | |
| TAAGACACATTGACACTGTT+CGG | + | chr7.1:76004933-76004952 | MS.gene061402:CDS | 35.0% | |
| TAATACCTTCAGCTTGACTA+AGG | + | chr7.1:76003007-76003026 | MS.gene061402:CDS | 35.0% | |
| TACAAGGATAGAGTCTCATA+AGG | - | chr7.1:76004171-76004190 | None:intergenic | 35.0% | |
| TACAGTGTATATTAGTGTGC+GGG | - | chr7.1:76002868-76002887 | None:intergenic | 35.0% | |
| TATGATGCACAAAGTTTGAG+AGG | - | chr7.1:76004495-76004514 | None:intergenic | 35.0% | |
| TCACTAAAATGTGTGGGTAT+GGG | + | chr7.1:76003380-76003399 | MS.gene061402:intron | 35.0% | |
| TGGTGTTTGATTGAGGAAAA+TGG | - | chr7.1:76004088-76004107 | None:intergenic | 35.0% | |
| TGTTTGATTGAGGAAAATGG+AGG | - | chr7.1:76004085-76004104 | None:intergenic | 35.0% | |
| TTACACATAAGTAAAAGGGG+TGG | - | chr7.1:76004769-76004788 | None:intergenic | 35.0% | |
| TTTGACTCTATAGTCTCGTT+TGG | - | chr7.1:76002393-76002412 | None:intergenic | 35.0% | |
| ! | ATCCCGATATTTGTTAAACC+TGG | - | chr7.1:76001512-76001531 | None:intergenic | 35.0% |
| ! | CAAGGTAAGTTGCTTTGATT+TGG | + | chr7.1:76000563-76000582 | MS.gene061402:intron | 35.0% |
| ! | GTAAGTTTCTGAAGATACTC+TGG | - | chr7.1:76004884-76004903 | None:intergenic | 35.0% |
| ! | GTTTGGACTCTGCTATTTAA+CGG | + | chr7.1:76001880-76001899 | MS.gene061402:intron | 35.0% |
| ! | TTAATTTGAGGACTGACCAA+TGG | - | chr7.1:76002688-76002707 | None:intergenic | 35.0% |
| ! | TTTCTTGCTATGGAGTTGTT+TGG | + | chr7.1:76001817-76001836 | MS.gene061402:intron | 35.0% |
| !! | CTGTGAGTTTGTTGAAATCA+AGG | + | chr7.1:76000545-76000564 | MS.gene061402:intron | 35.0% |
| !! | TCTAGGGCTGCAAATAATTT+TGG | + | chr7.1:76002836-76002855 | MS.gene061402:CDS | 35.0% |
| !! | TTGTTTTGTATCAATGGCTG+TGG | + | chr7.1:76001274-76001293 | MS.gene061402:intron | 35.0% |
| !! | TTTCCAATAGGGTACTGATA+CGG | - | chr7.1:76002652-76002671 | None:intergenic | 35.0% |
| !!! | CACTAGTTCGCTAGTTTTTA+CGG | + | chr7.1:76000974-76000993 | MS.gene061402:intron | 35.0% |
| !!! | TCTAGTTCACTTTTTCTTCC+AGG | + | chr7.1:76001491-76001510 | MS.gene061402:intron | 35.0% |
| AAATTGTGTGCAGGGAATTC+TGG | + | chr7.1:76002791-76002810 | MS.gene061402:intron | 40.0% | |
| AAGACACATTGACACTGTTC+GGG | + | chr7.1:76004934-76004953 | MS.gene061402:CDS | 40.0% | |
| AATCCGTATCAGTACCCTAT+TGG | + | chr7.1:76002646-76002665 | MS.gene061402:CDS | 40.0% | |
| AATGGCTGTGGTTGATTATG+AGG | + | chr7.1:76001286-76001305 | MS.gene061402:intron | 40.0% | |
| ACTGTTCGGGCATATACATT+CGG | + | chr7.1:76004947-76004966 | MS.gene061402:CDS | 40.0% | |
| AGAAACTTACATACCTCTGC+TGG | + | chr7.1:76004894-76004913 | MS.gene061402:CDS | 40.0% | |
| AGTACCCTATTGGAAAGAAG+CGG | + | chr7.1:76002656-76002675 | MS.gene061402:CDS | 40.0% | |
| AGTGAAAGCTCTTCTTCGTT+AGG | - | chr7.1:75999981-76000000 | None:intergenic | 40.0% | |
| AGTTCAAAAATTGGAGGGGA+AGG | - | chr7.1:76004033-76004052 | None:intergenic | 40.0% | |
| ATATCATGAGCCTCTTGCAA+AGG | - | chr7.1:76005019-76005038 | None:intergenic | 40.0% | |
| ATATGGGTAGAATTGGGTAC+AGG | + | chr7.1:76003346-76003365 | MS.gene061402:intron | 40.0% | |
| ATCCACTTTAGACTCTCTTC+TGG | + | chr7.1:76002570-76002589 | MS.gene061402:CDS | 40.0% | |
| ATTCATTGCCATCTATCCCA+AGG | - | chr7.1:76004269-76004288 | None:intergenic | 40.0% | |
| ATTGAGGAAAATGGAGGAGA+GGG | - | chr7.1:76004079-76004098 | None:intergenic | 40.0% | |
| CAGTCATGAATACCAGAAGA+GGG | - | chr7.1:76000095-76000114 | None:intergenic | 40.0% | |
| CGCAGAAGCTGAAACAATTA+TGG | - | chr7.1:76004355-76004374 | None:intergenic | 40.0% | |
| CTCACTAAAATGTGTGGGTA+TGG | + | chr7.1:76003379-76003398 | MS.gene061402:intron | 40.0% | |
| CTCTATAGTCTCGTTTGGAT+TGG | - | chr7.1:76002388-76002407 | None:intergenic | 40.0% | |
| CTTACAATGATAGCACCAAC+AGG | - | chr7.1:76003224-76003243 | None:intergenic | 40.0% | |
| CTTTGTACACAATTCGCACA+TGG | + | chr7.1:76004807-76004826 | MS.gene061402:CDS | 40.0% | |
| GAGGAATGAGATTCATTCCT+TGG | + | chr7.1:76004249-76004268 | MS.gene061402:intron | 40.0% | |
| GAGTATCCACAATTGTATGC+AGG | + | chr7.1:76002423-76002442 | MS.gene061402:intron | 40.0% | |
| GATTATGAGGAATGTGCTGT+TGG | + | chr7.1:76001299-76001318 | MS.gene061402:intron | 40.0% | |
| GATTCATTCCTTGGGATAGA+TGG | + | chr7.1:76004258-76004277 | MS.gene061402:intron | 40.0% | |
| GCACTTACACTTCTAATCGA+AGG | + | chr7.1:76000345-76000364 | MS.gene061402:intron | 40.0% | |
| GTTCAAAAATTGGAGGGGAA+GGG | - | chr7.1:76004032-76004051 | None:intergenic | 40.0% | |
| GTTTGTATCAACTAAGCCTC+AGG | - | chr7.1:76002910-76002929 | None:intergenic | 40.0% | |
| TAGTCTAAAAGTTTCGCCTC+TGG | - | chr7.1:76001688-76001707 | None:intergenic | 40.0% | |
| TATCCACAATTGTATGCAGG+AGG | + | chr7.1:76002426-76002445 | MS.gene061402:intron | 40.0% | |
| TCGACGATGAATGAGATTAC+TGG | - | chr7.1:76004312-76004331 | None:intergenic | 40.0% | |
| TCTGGTATTCATGACTGCTA+TGG | + | chr7.1:76000098-76000117 | MS.gene061402:intron | 40.0% | |
| TGAACAGGGCCAAAATTTAG+AGG | + | chr7.1:76003984-76004003 | MS.gene061402:intron | 40.0% | |
| TGAATACCAGAAGAGGGTTT+AGG | - | chr7.1:76000089-76000108 | None:intergenic | 40.0% | |
| TGATGTAGCTACATTTCCTG+AGG | + | chr7.1:76002891-76002910 | MS.gene061402:intron | 40.0% | |
| TGCAAGAGGCTCATGATATT+GGG | + | chr7.1:76005020-76005039 | MS.gene061402:CDS | 40.0% | |
| TGGCCCTGTTCAATATTAGA+GGG | - | chr7.1:76003976-76003995 | None:intergenic | 40.0% | |
| TTGCAAGAGGCTCATGATAT+TGG | + | chr7.1:76005019-76005038 | MS.gene061402:CDS | 40.0% | |
| TTGGCCCTGTTCAATATTAG+AGG | - | chr7.1:76003977-76003996 | None:intergenic | 40.0% | |
| TTGTTCCTTAGTCAAGCTGA+AGG | - | chr7.1:76003015-76003034 | None:intergenic | 40.0% | |
| ! | GACTCTGCTATTTAACGGAA+AGG | + | chr7.1:76001885-76001904 | MS.gene061402:intron | 40.0% |
| ! | GAGGCGAAACTTTTAGACTA+TGG | + | chr7.1:76001688-76001707 | MS.gene061402:intron | 40.0% |
| ! | GTCTAAAGTGGATGCAATGA+TGG | - | chr7.1:76002563-76002582 | None:intergenic | 40.0% |
| ! | TGGTCTAATTGCTGCACTTT+TGG | + | chr7.1:76003172-76003191 | MS.gene061402:CDS | 40.0% |
| ! | TTTCTGGAAGATGCTATCGA+TGG | + | chr7.1:76001436-76001455 | MS.gene061402:intron | 40.0% |
| !! | ATACGGATTTGGTGTTTGCA+TGG | - | chr7.1:76002635-76002654 | None:intergenic | 40.0% |
| !! | ATAGGGTACTGATACGGATT+TGG | - | chr7.1:76002646-76002665 | None:intergenic | 40.0% |
| !! | CACTTCTAATCGAAGGTGTT+CGG | + | chr7.1:76000352-76000371 | MS.gene061402:intron | 40.0% |
| !! | CAGTTTCTGATAATGGTGAC+CGG | + | chr7.1:76000006-76000025 | MS.gene061402:CDS | 40.0% |
| !! | TCAAGCTGAAGGTATTATCC+TGG | - | chr7.1:76003004-76003023 | None:intergenic | 40.0% |
| !!! | CGGTTTTTGGGTAGATATCT+TGG | + | chr7.1:76001577-76001596 | MS.gene061402:intron | 40.0% |
| AAACCTTTGACATTCCGGGA+AGG | - | chr7.1:76002051-76002070 | None:intergenic | 45.0% | |
| AAAGAAGCGGATGCAACCAT+TGG | + | chr7.1:76002669-76002688 | MS.gene061402:CDS | 45.0% | |
| AAATGGAGGAGAGGGAAAGA+TGG | - | chr7.1:76004071-76004090 | None:intergenic | 45.0% | |
| AACACTTGGCCAACCCAAAT+GGG | + | chr7.1:76000786-76000805 | MS.gene061402:intron | 45.0% | |
| AAGACTCCTAAACCCTCTTC+TGG | + | chr7.1:76000080-76000099 | MS.gene061402:CDS | 45.0% | |
| AAGTGGATGCAATGATGGCA+AGG | - | chr7.1:76002558-76002577 | None:intergenic | 45.0% | |
| ACAGGGCCAAAATTTAGAGG+AGG | + | chr7.1:76003987-76004006 | MS.gene061402:intron | 45.0% | |
| AGCACTTGTGAAACCGTTTG+AGG | - | chr7.1:76002339-76002358 | None:intergenic | 45.0% | |
| AGTGGATGCAATGATGGCAA+GGG | - | chr7.1:76002557-76002576 | None:intergenic | 45.0% | |
| CAATGTGTCTTACAGCCTTG+TGG | - | chr7.1:76004925-76004944 | None:intergenic | 45.0% | |
| CAATTGTGGATACTCAGCCA+AGG | - | chr7.1:76002418-76002437 | None:intergenic | 45.0% | |
| CACATGGTCAATGACAGTGT+TGG | + | chr7.1:76004823-76004842 | MS.gene061402:CDS | 45.0% | |
| CAGGGCCAAAATTTAGAGGA+GGG | + | chr7.1:76003988-76004007 | MS.gene061402:intron | 45.0% | |
| CATATCCCAGACACAAACAC+TGG | - | chr7.1:76000479-76000498 | None:intergenic | 45.0% | |
| CATGACTGCTATGGTGTTCT+TGG | + | chr7.1:76000107-76000126 | MS.gene061402:intron | 45.0% | |
| CTAAATTGGTGGAAAGGGGT+TGG | + | chr7.1:76003765-76003784 | MS.gene061402:intron | 45.0% | |
| GACTATAGAGTCAAACGCCT+TGG | + | chr7.1:76002398-76002417 | MS.gene061402:intron | 45.0% | |
| GATGATTGGATGGATCCTGT+TGG | + | chr7.1:76003206-76003225 | MS.gene061402:CDS | 45.0% | |
| GATTGAGGAAAATGGAGGAG+AGG | - | chr7.1:76004080-76004099 | None:intergenic | 45.0% | |
| GCAAGAGGCTCATGATATTG+GGG | + | chr7.1:76005021-76005040 | MS.gene061402:CDS | 45.0% | |
| GCACTTGTGAAACCGTTTGA+GGG | - | chr7.1:76002338-76002357 | None:intergenic | 45.0% | |
| GCAGTCATGAATACCAGAAG+AGG | - | chr7.1:76000096-76000115 | None:intergenic | 45.0% | |
| GCATCCGCTTCTTTCCAATA+GGG | - | chr7.1:76002663-76002682 | None:intergenic | 45.0% | |
| GCTTGAAGGCTTTACCGAAA+TGG | + | chr7.1:76002003-76002022 | MS.gene061402:CDS | 45.0% | |
| GTCCAGAAGAGAGTCTAAAG+TGG | - | chr7.1:76002575-76002594 | None:intergenic | 45.0% | |
| TCAGTGCTCAAAAGAGCCAA+TGG | - | chr7.1:76004676-76004695 | None:intergenic | 45.0% | |
| TCGTCGACAACTGTAGTTAC+TGG | + | chr7.1:76004325-76004344 | MS.gene061402:intron | 45.0% | |
| TGCATCCGCTTCTTTCCAAT+AGG | - | chr7.1:76002664-76002683 | None:intergenic | 45.0% | |
| TGGTAAGTCCGAACCCATTT+GGG | - | chr7.1:76000802-76000821 | None:intergenic | 45.0% | |
| TGTAATTCTTCCACTGCAGC+TGG | + | chr7.1:76004784-76004803 | MS.gene061402:intron | 45.0% | |
| TTGGAGTATGCTCCTTCTCA+AGG | - | chr7.1:76000755-76000774 | None:intergenic | 45.0% | |
| TTGGTAAGTCCGAACCCATT+TGG | - | chr7.1:76000803-76000822 | None:intergenic | 45.0% | |
| TTTCCATAGGCTCCCTCAAA+CGG | + | chr7.1:76002323-76002342 | MS.gene061402:intron | 45.0% | |
| TTTCCTTCCCGGAATGTCAA+AGG | + | chr7.1:76002045-76002064 | MS.gene061402:CDS | 45.0% | |
| ! | CTCTGCTAAGGCATCCATTT+CGG | - | chr7.1:76002020-76002039 | None:intergenic | 45.0% |
| ! | TTGAGAAGGAGCATACTCCA+AGG | + | chr7.1:76000754-76000773 | MS.gene061402:intron | 45.0% |
| !! | ATAGCGGCGCTTTAAAGCTA+CGG | + | chr7.1:76004538-76004557 | MS.gene061402:intron | 45.0% |
| !! | CATGCTTTTCTAGAGACCAG+AGG | + | chr7.1:76001669-76001688 | MS.gene061402:intron | 45.0% |
| !! | GCTTTAAAGCTACGGCGTAA+CGG | + | chr7.1:76004546-76004565 | MS.gene061402:intron | 45.0% |
| !! | ATAAAAAATAAAATAAAAAG+AGG | - | chr7.1:76001175-76001194 | None:intergenic | 5.0% |
| !!! | ATTCAATTTTTTTTTTTTAA+CGG | + | chr7.1:76003629-76003648 | MS.gene061402:intron | 5.0% |
| !!! | TTTAATTTCAAATTTATTTA+CGG | + | chr7.1:76000658-76000677 | MS.gene061402:intron | 5.0% |
| AAACCGTTTGAGGGAGCCTA+TGG | - | chr7.1:76002329-76002348 | None:intergenic | 50.0% | |
| AAGGAAACCACGCTCTGCTA+AGG | - | chr7.1:76002032-76002051 | None:intergenic | 50.0% | |
| AAGTCCGAACCCATTTGGGT+TGG | - | chr7.1:76000798-76000817 | None:intergenic | 50.0% | |
| ACATCATGCACTCGTGGCAA+GGG | + | chr7.1:76003867-76003886 | MS.gene061402:intron | 50.0% | |
| AGCAGACATGCCTTTGCAAG+AGG | + | chr7.1:76005006-76005025 | MS.gene061402:CDS | 50.0% | |
| AGGAGCGAGATAAGTTAGCC+AGG | + | chr7.1:76002446-76002465 | MS.gene061402:CDS | 50.0% | |
| ATAATGGTGACCGGTCATGG+CGG | + | chr7.1:76000015-76000034 | MS.gene061402:CDS | 50.0% | |
| ATGCTCCTTCTCAAGGTCTC+AGG | - | chr7.1:76000748-76000767 | None:intergenic | 50.0% | |
| CAACACTTGGCCAACCCAAA+TGG | + | chr7.1:76000785-76000804 | MS.gene061402:intron | 50.0% | |
| CGTGTCCAGTGTTTGTGTCT+GGG | + | chr7.1:76000471-76000490 | MS.gene061402:intron | 50.0% | |
| GAATGTGCTTGTGCATGCTC+AGG | - | chr7.1:76005127-76005146 | None:intergenic | 50.0% | |
| GATTGTGAAGGCCTATGCTC+AGG | + | chr7.1:76003118-76003137 | MS.gene061402:CDS | 50.0% | |
| GCTCCTCCTGCATACAATTG+TGG | - | chr7.1:76002432-76002451 | None:intergenic | 50.0% | |
| GTATCCACTGTGCCACATTC+TGG | + | chr7.1:76003410-76003429 | MS.gene061402:intron | 50.0% | |
| GTCTCAGGTTCGATTCTCCT+CGG | - | chr7.1:76000733-76000752 | None:intergenic | 50.0% | |
| TACCTCCACCACACTACCAA+AGG | - | chr7.1:76003840-76003859 | None:intergenic | 50.0% | |
| TCGAACCTGAGACCTTGAGA+AGG | + | chr7.1:76000740-76000759 | MS.gene061402:intron | 50.0% | |
| TCGTGTCCAGTGTTTGTGTC+TGG | + | chr7.1:76000470-76000489 | MS.gene061402:intron | 50.0% | |
| TCTCTTCTGGACCTCCTTTC+TGG | + | chr7.1:76002583-76002602 | MS.gene061402:CDS | 50.0% | |
| TCTGGTGTTTGCCTCTGTCA+TGG | + | chr7.1:76002809-76002828 | MS.gene061402:CDS | 50.0% | |
| TGCTGAGTACTATCAGCAGC+AGG | + | chr7.1:76001973-76001992 | MS.gene061402:CDS | 50.0% | |
| ! | ACAAAAGCACGCTCGATCTC+AGG | - | chr7.1:76005076-76005095 | None:intergenic | 50.0% |
| ! | CAGCAGGTTGAAGTGCTTGA+AGG | + | chr7.1:76001989-76002008 | MS.gene061402:CDS | 50.0% |
| ! | TCTTGCAAAGGCATGTCTGC+TGG | - | chr7.1:76005007-76005026 | None:intergenic | 50.0% |
| ! | TGACTAAGGAACAAGAGCGC+TGG | + | chr7.1:76003021-76003040 | MS.gene061402:CDS | 50.0% |
| ! | TGTGTCTTACAGCCTTGTGG+TGG | - | chr7.1:76004922-76004941 | None:intergenic | 50.0% |
| ! | TTGGCCAACCCAAATGGGTT+CGG | + | chr7.1:76000791-76000810 | MS.gene061402:intron | 50.0% |
| !! | CATTTGGGTTGGCCAAGTGT+TGG | - | chr7.1:76000787-76000806 | None:intergenic | 50.0% |
| !! | CTGATAATGGTGACCGGTCA+TGG | + | chr7.1:76000012-76000031 | MS.gene061402:CDS | 50.0% |
| !! | GACTAAGGAACAAGAGCGCT+GGG | + | chr7.1:76003022-76003041 | MS.gene061402:CDS | 50.0% |
| !! | GTGATGATGGAGGGTTCCTT+TGG | + | chr7.1:76003821-76003840 | MS.gene061402:intron | 50.0% |
| !! | GTTGGTGTTGGCAGTGTTGA+AGG | + | chr7.1:76003783-76003802 | MS.gene061402:intron | 50.0% |
| !! | TGTGTGGTGGTGATGATGGA+GGG | + | chr7.1:76003812-76003831 | MS.gene061402:intron | 50.0% |
| !! | TTCCTTTGGTAGTGTGGTGG+AGG | + | chr7.1:76003835-76003854 | MS.gene061402:intron | 50.0% |
| !! | TTTGGTAGTGTGGTGGAGGT+AGG | + | chr7.1:76003839-76003858 | MS.gene061402:intron | 50.0% |
| ATGGATGCCTTAGCAGAGCG+TGG | + | chr7.1:76002022-76002041 | MS.gene061402:CDS | 55.0% | |
| CAAGGTCTCACGCCAACACT+TGG | + | chr7.1:76000772-76000791 | MS.gene061402:intron | 55.0% | |
| CCTCTGTCATGGCGACTCTA+GGG | + | chr7.1:76002820-76002839 | MS.gene061402:CDS | 55.0% | |
| CGAAGTTCAACCGCCATGAC+CGG | - | chr7.1:76000028-76000047 | None:intergenic | 55.0% | |
| CGGCTCTCACTACTTTGTCG+AGG | + | chr7.1:76004967-76004986 | MS.gene061402:CDS | 55.0% | |
| GACATCATGCACTCGTGGCA+AGG | + | chr7.1:76003866-76003885 | MS.gene061402:intron | 55.0% | |
| GAGAGGACATCATGCACTCG+TGG | + | chr7.1:76003861-76003880 | MS.gene061402:intron | 55.0% | |
| GCTCTCTCAAATTGGCACCG+AGG | + | chr7.1:76000713-76000732 | MS.gene061402:intron | 55.0% | |
| GTGTACAAAGCCAGCTGCAG+TGG | - | chr7.1:76004797-76004816 | None:intergenic | 55.0% | |
| GTGTCCAGAATGTGGCACAG+TGG | - | chr7.1:76003417-76003436 | None:intergenic | 55.0% | |
| GTGTTGAAGGCTGGTGTGTG+TGG | + | chr7.1:76003796-76003815 | MS.gene061402:intron | 55.0% | |
| TGCACTCGTGGCAAGGGTAA+AGG | + | chr7.1:76003873-76003892 | MS.gene061402:intron | 55.0% | |
| TTGAAGGCTGGTGTGTGTGG+TGG | + | chr7.1:76003799-76003818 | MS.gene061402:intron | 55.0% | |
| ! | CACCGTCTCCACCATTTTCC+CGG | - | chr7.1:75999952-75999971 | None:intergenic | 55.0% |
| ! | GACCGGGAAAATGGTGGAGA+CGG | + | chr7.1:75999947-75999966 | MS.gene061402:CDS | 55.0% |
| ! | GGTGTGTGTGGTGGTGATGA+TGG | + | chr7.1:76003808-76003827 | MS.gene061402:intron | 55.0% |
| ! | GTGTTGGCAGTGTTGAAGGC+TGG | + | chr7.1:76003787-76003806 | MS.gene061402:intron | 55.0% |
| ! | TAGTGTGGTGGAGGTAGGAG+AGG | + | chr7.1:76003844-76003863 | MS.gene061402:intron | 55.0% |
| !! | CAAGTGTTGGCGTGAGACCT+TGG | - | chr7.1:76000774-76000793 | None:intergenic | 55.0% |
| !! | GAACAAGAGCGCTGGGTTGT+GGG | + | chr7.1:76003029-76003048 | MS.gene061402:CDS | 55.0% |
| !! | GGAGGGTTCCTTTGGTAGTG+TGG | + | chr7.1:76003829-76003848 | MS.gene061402:intron | 55.0% |
| !! | GGGTTCCTTTGGTAGTGTGG+TGG | + | chr7.1:76003832-76003851 | MS.gene061402:intron | 55.0% |
| !! | GTGTGTGGTGGTGATGATGG+AGG | + | chr7.1:76003811-76003830 | MS.gene061402:intron | 55.0% |
| !! | TGGTGGAAAGGGGTTGGTGT+TGG | + | chr7.1:76003771-76003790 | MS.gene061402:intron | 55.0% |
| CCCTAGAGTCGCCATGACAG+AGG | - | chr7.1:76002823-76002842 | None:intergenic | 60.0% | |
| CCTCTGCTGGAACCACCACA+AGG | + | chr7.1:76004907-76004926 | MS.gene061402:CDS | 60.0% | |
| CCTTGTGGTGGTTCCAGCAG+AGG | - | chr7.1:76004910-76004929 | None:intergenic | 60.0% | |
| GATGGCAAACGTCTCGCTCC+TGG | - | chr7.1:76002467-76002486 | None:intergenic | 60.0% | |
| GCAGAGCGTGGTTTCCTTCC+CGG | + | chr7.1:76002034-76002053 | MS.gene061402:CDS | 60.0% | |
| GCCTCTGTCATGGCGACTCT+AGG | + | chr7.1:76002819-76002838 | MS.gene061402:CDS | 60.0% | |
| GGAGGGGAAGGGAACGAAGA+GGG | - | chr7.1:76004021-76004040 | None:intergenic | 60.0% | |
| TGGAGGGGAAGGGAACGAAG+AGG | - | chr7.1:76004022-76004041 | None:intergenic | 60.0% | |
| ! | CGGGAAAATGGTGGAGACGG+TGG | + | chr7.1:75999950-75999969 | MS.gene061402:CDS | 60.0% |
| !! | GGAACAAGAGCGCTGGGTTG+TGG | + | chr7.1:76003028-76003047 | MS.gene061402:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 75999945 | 76005150 | 75999945 | ID=MS.gene061402 |
| chr7.1 | mRNA | 75999945 | 76005150 | 75999945 | ID=MS.gene061402.t1;Parent=MS.gene061402 |
| chr7.1 | exon | 75999945 | 76000101 | 75999945 | ID=MS.gene061402.t1.exon1;Parent=MS.gene061402.t1 |
| chr7.1 | CDS | 75999945 | 76000101 | 75999945 | ID=cds.MS.gene061402.t1;Parent=MS.gene061402.t1 |
| chr7.1 | exon | 76001957 | 76002066 | 76001957 | ID=MS.gene061402.t1.exon2;Parent=MS.gene061402.t1 |
| chr7.1 | CDS | 76001957 | 76002066 | 76001957 | ID=cds.MS.gene061402.t1;Parent=MS.gene061402.t1 |
| chr7.1 | exon | 76002445 | 76002690 | 76002445 | ID=MS.gene061402.t1.exon3;Parent=MS.gene061402.t1 |
| chr7.1 | CDS | 76002445 | 76002690 | 76002445 | ID=cds.MS.gene061402.t1;Parent=MS.gene061402.t1 |
| chr7.1 | exon | 76002804 | 76002884 | 76002804 | ID=MS.gene061402.t1.exon4;Parent=MS.gene061402.t1 |
| chr7.1 | CDS | 76002804 | 76002884 | 76002804 | ID=cds.MS.gene061402.t1;Parent=MS.gene061402.t1 |
| chr7.1 | exon | 76003005 | 76003238 | 76003005 | ID=MS.gene061402.t1.exon5;Parent=MS.gene061402.t1 |
| chr7.1 | CDS | 76003005 | 76003238 | 76003005 | ID=cds.MS.gene061402.t1;Parent=MS.gene061402.t1 |
| chr7.1 | exon | 76004803 | 76005150 | 76004803 | ID=MS.gene061402.t1.exon6;Parent=MS.gene061402.t1 |
| chr7.1 | CDS | 76004803 | 76005150 | 76004803 | ID=cds.MS.gene061402.t1;Parent=MS.gene061402.t1 |
| Gene Sequence |
| Protein sequence |
