Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009485.t1 | XP_024635317.1 | 95.3 | 448 | 20 | 1 | 1 | 448 | 1 | 447 | 2.60E-246 | 860.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009485.t1 | Q9Y7K5 | 29.0 | 383 | 245 | 10 | 66 | 444 | 66 | 425 | 3.3e-32 | 141.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009485.t1 | G7J0E2 | 95.3 | 448 | 20 | 1 | 1 | 448 | 1 | 447 | 1.9e-246 | 860.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009485 | MS.gene30433 | PPI |
| MS.gene47479 | MS.gene009485 | PPI |
| MS.gene009485 | MS.gene008767 | PPI |
| MS.gene009485 | MS.gene23196 | PPI |
| MS.gene35613 | MS.gene009485 | PPI |
| MS.gene009485 | MS.gene022502 | PPI |
| MS.gene26532 | MS.gene009485 | PPI |
| MS.gene009485 | MS.gene29842 | PPI |
| MS.gene009485 | MS.gene043662 | PPI |
| MS.gene009485 | MS.gene39623 | PPI |
| MS.gene009485 | MS.gene02469 | PPI |
| MS.gene52355 | MS.gene009485 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009485.t1 | MTR_3g010010 | 98.884 | 448 | 4 | 1 | 1 | 448 | 43 | 489 | 0.0 | 917 |
| MS.gene009485.t1 | MTR_3g010010 | 98.884 | 448 | 4 | 1 | 1 | 448 | 1 | 447 | 0.0 | 917 |
| MS.gene009485.t1 | MTR_2g028050 | 73.378 | 447 | 119 | 0 | 1 | 447 | 1 | 447 | 0.0 | 681 |
| MS.gene009485.t1 | MTR_7g022190 | 65.777 | 412 | 140 | 1 | 35 | 446 | 28 | 438 | 0.0 | 593 |
| MS.gene009485.t1 | MTR_3g074070 | 58.000 | 400 | 167 | 1 | 49 | 448 | 59 | 457 | 3.55e-177 | 503 |
| MS.gene009485.t1 | MTR_3g074070 | 58.145 | 399 | 166 | 1 | 50 | 448 | 88 | 485 | 4.03e-176 | 502 |
| MS.gene009485.t1 | MTR_3g074070 | 57.855 | 401 | 167 | 2 | 49 | 448 | 59 | 458 | 6.35e-176 | 500 |
| MS.gene009485.t1 | MTR_3g010110 | 75.490 | 306 | 51 | 3 | 1 | 305 | 1 | 283 | 6.54e-160 | 453 |
| MS.gene009485.t1 | MTR_3g074070 | 59.306 | 317 | 128 | 1 | 132 | 448 | 28 | 343 | 2.27e-142 | 410 |
| MS.gene009485.t1 | MTR_3g074070 | 57.860 | 299 | 125 | 1 | 150 | 448 | 1 | 298 | 4.48e-130 | 378 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009485.t1 | AT1G55680 | 76.940 | 451 | 95 | 2 | 1 | 448 | 1 | 445 | 0.0 | 714 |
| MS.gene009485.t1 | AT3G13340 | 80.340 | 412 | 81 | 0 | 37 | 448 | 36 | 447 | 0.0 | 709 |
| MS.gene009485.t1 | AT3G13340 | 80.340 | 412 | 81 | 0 | 37 | 448 | 36 | 447 | 0.0 | 709 |
| MS.gene009485.t1 | AT3G13340 | 80.340 | 412 | 81 | 0 | 37 | 448 | 36 | 447 | 0.0 | 709 |
| MS.gene009485.t1 | AT5G56190 | 72.566 | 452 | 115 | 4 | 1 | 448 | 1 | 447 | 0.0 | 695 |
| MS.gene009485.t1 | AT5G56190 | 72.566 | 452 | 115 | 4 | 1 | 448 | 1 | 447 | 0.0 | 695 |
| MS.gene009485.t1 | AT5G56190 | 72.566 | 452 | 115 | 4 | 1 | 448 | 1 | 447 | 0.0 | 695 |
| MS.gene009485.t1 | AT5G56190 | 72.566 | 452 | 115 | 4 | 1 | 448 | 1 | 447 | 0.0 | 695 |
| MS.gene009485.t1 | AT5G56190 | 73.469 | 441 | 110 | 3 | 10 | 448 | 6 | 441 | 0.0 | 695 |
| MS.gene009485.t1 | AT5G56190 | 73.469 | 441 | 110 | 3 | 10 | 448 | 6 | 441 | 0.0 | 695 |
| MS.gene009485.t1 | AT5G56190 | 73.469 | 441 | 110 | 3 | 10 | 448 | 27 | 462 | 0.0 | 694 |
| MS.gene009485.t1 | AT1G78070 | 53.846 | 442 | 203 | 1 | 8 | 448 | 8 | 449 | 8.94e-179 | 507 |
| MS.gene009485.t1 | AT1G36070 | 54.187 | 406 | 183 | 2 | 45 | 447 | 11 | 416 | 4.10e-167 | 476 |
| MS.gene009485.t1 | AT1G36070 | 53.528 | 411 | 188 | 2 | 40 | 447 | 7 | 417 | 1.05e-166 | 476 |
| MS.gene009485.t1 | AT1G36070 | 55.051 | 396 | 175 | 2 | 55 | 447 | 4 | 399 | 1.31e-166 | 474 |
| MS.gene009485.t1 | AT1G78070 | 58.991 | 317 | 130 | 0 | 131 | 447 | 23 | 339 | 2.29e-144 | 416 |
| MS.gene009485.t1 | AT1G78070 | 58.917 | 314 | 129 | 0 | 134 | 447 | 25 | 338 | 2.97e-143 | 413 |
| MS.gene009485.t1 | AT1G36070 | 55.369 | 298 | 133 | 0 | 150 | 447 | 1 | 298 | 8.75e-127 | 369 |
| MS.gene009485.t1 | AT1G36070 | 55.369 | 298 | 133 | 0 | 150 | 447 | 1 | 298 | 8.75e-127 | 369 |
Find 117 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGACTATTGCTCCATTATC+TGG | 0.125977 | 3.2:-3893845 | MS.gene009485:CDS |
| TCTGGTTGCTGGAGGATTTC+AGG | 0.127364 | 3.2:-3895566 | MS.gene009485:CDS |
| TCTGAAGTACTCAATGTTTC+TGG | 0.174983 | 3.2:-3895862 | MS.gene009485:CDS |
| GCTTATGCAGTTGAGGAATT+TGG | 0.211449 | 3.2:-3895965 | MS.gene009485:intron |
| GAACAAGAAATTGATTTCTT+TGG | 0.221456 | 3.2:-3893581 | MS.gene009485:CDS |
| CCCTGACCTGTCCCCTGAAT+GGG | 0.249837 | 3.2:+3897419 | None:intergenic |
| ATGAAAAGGGATTCGGTATC+TGG | 0.289000 | 3.2:+3893533 | None:intergenic |
| TGCAGTTGAGGAATTTGGTT+TGG | 0.296738 | 3.2:-3895960 | MS.gene009485:intron |
| GATTTCTTTGGTGAGATATC+AGG | 0.300013 | 3.2:-3893569 | MS.gene009485:CDS |
| GAGTCAACCAACATACTTTC+AGG | 0.305096 | 3.2:+3893994 | None:intergenic |
| TATGGTAGCCTTCTCGAATA+TGG | 0.308564 | 3.2:-3893491 | MS.gene009485:CDS |
| AGGACAAAACCTGTCGGATT+TGG | 0.308920 | 3.2:-3893757 | MS.gene009485:CDS |
| CTGGTTGCTGGAGGATTTCA+GGG | 0.323770 | 3.2:-3895565 | MS.gene009485:CDS |
| AATCAAGGTATGAGTAATTA+TGG | 0.324026 | 3.2:+3893462 | None:intergenic |
| TCCCTGACCTGTCCCCTGAA+TGG | 0.330861 | 3.2:+3897418 | None:intergenic |
| TAATCTAAGTGCCCAGATAA+TGG | 0.343332 | 3.2:+3893833 | None:intergenic |
| TTCTTCCGATGGCAAGTATA+TGG | 0.344733 | 3.2:-3893663 | MS.gene009485:CDS |
| AACCCCTCCAATAGACTTCC+AGG | 0.350840 | 3.2:+3895631 | None:intergenic |
| TGGAATCAGAAACTTTGATA+TGG | 0.354680 | 3.2:-3894320 | MS.gene009485:CDS |
| TGCAGTAAAAGATAATCTTC+TGG | 0.365063 | 3.2:-3895584 | MS.gene009485:CDS |
| AAAGATAATCTTCTGGTTGC+TGG | 0.366888 | 3.2:-3895577 | MS.gene009485:CDS |
| ATGTTGGTTGACTCTCAAAA+TGG | 0.369339 | 3.2:-3893985 | MS.gene009485:CDS |
| GGACAAAACCTGTCGGATTT+GGG | 0.377449 | 3.2:-3893756 | MS.gene009485:CDS |
| CAAGTCAGTGGCAGTGTTGA+AGG | 0.422513 | 3.2:-3893717 | MS.gene009485:CDS |
| CCCCATTCAGGGGACAGGTC+AGG | 0.425032 | 3.2:-3897420 | MS.gene009485:CDS |
| CATTCACTGGCCAGGGAAAA+CGG | 0.432055 | 3.2:+3894272 | None:intergenic |
| GCAGTTGAGGAATTTGGTTT+GGG | 0.432688 | 3.2:-3895959 | MS.gene009485:intron |
| GGTAAGCTACTTCTGATTGT+TGG | 0.440890 | 3.2:-3894024 | MS.gene009485:CDS |
| GAAACATCCTGGAAGTCTAT+TGG | 0.441146 | 3.2:-3895638 | MS.gene009485:CDS |
| CTTCAACACTGCCACTGACT+TGG | 0.442971 | 3.2:+3893718 | None:intergenic |
| AAGACATCCAGGGGATTCCT+TGG | 0.444253 | 3.2:-3897515 | MS.gene009485:CDS |
| AAGAAGAGGACAAGACATCC+AGG | 0.448707 | 3.2:-3897526 | MS.gene009485:CDS |
| GGGGTTTGGGATCGTACTTA+TGG | 0.456853 | 3.2:-3893509 | MS.gene009485:CDS |
| AGCTGACACCAGGTCGATCT+AGG | 0.458539 | 3.2:+3894542 | None:intergenic |
| GATCCCAAACCCCAATGAAA+AGG | 0.464205 | 3.2:+3893519 | None:intergenic |
| CGGAAGAATGCCGGATTGAA+CGG | 0.464795 | 3.2:+3893678 | None:intergenic |
| ATTATTCATTCGCATCATCA+TGG | 0.467805 | 3.2:-3893814 | MS.gene009485:CDS |
| GAGGATGAAATTGATATTGA+TGG | 0.475862 | 3.2:-3897804 | MS.gene009485:CDS |
| GAGAAAGGTATCGGCAAACT+AGG | 0.482881 | 3.2:-3897473 | MS.gene009485:CDS |
| GTAGCAAAGGTTACCCCATC+GGG | 0.483017 | 3.2:+3893788 | None:intergenic |
| ATCCCAAACCCCAATGAAAA+GGG | 0.484751 | 3.2:+3893520 | None:intergenic |
| ATCAGAAGTAGCTTACCATC+TGG | 0.484849 | 3.2:+3894030 | None:intergenic |
| AACCCCAATGAAAAGGGATT+CGG | 0.487207 | 3.2:+3893526 | None:intergenic |
| AGTTTGCCGATACCTTTCTC+TGG | 0.487413 | 3.2:+3897476 | None:intergenic |
| GAGACTCACATTCACTGGCC+AGG | 0.487504 | 3.2:+3894264 | None:intergenic |
| GATGGGGTAACCTTTGCTAC+TGG | 0.493849 | 3.2:-3893785 | MS.gene009485:CDS |
| GGCTATCCCAAGGAATCCCC+TGG | 0.505261 | 3.2:+3897508 | None:intergenic |
| CCCATTCAGGGGACAGGTCA+GGG | 0.514571 | 3.2:-3897419 | MS.gene009485:CDS |
| ACCTTTCTCTGGTGATGCTA+AGG | 0.517839 | 3.2:+3897487 | None:intergenic |
| AGACTATTGCTCCATTATCT+GGG | 0.519813 | 3.2:-3893844 | MS.gene009485:CDS |
| GCAATTAAATCATTGAATCA+AGG | 0.521945 | 3.2:+3893447 | None:intergenic |
| ACAGCATCAAATAATGATTG+TGG | 0.525146 | 3.2:-3894340 | MS.gene009485:CDS |
| GTCATAAATCTCAATGGCAT+TGG | 0.527036 | 3.2:+3894483 | None:intergenic |
| CCTGACCTGTCCCCTGAATG+GGG | 0.532977 | 3.2:+3897420 | None:intergenic |
| TCCAAGAGACTCACATTCAC+TGG | 0.540290 | 3.2:+3894259 | None:intergenic |
| GTCCTGGTTTCCAGTAGCAA+AGG | 0.540720 | 3.2:+3893775 | None:intergenic |
| AGACATCCAGGGGATTCCTT+GGG | 0.540725 | 3.2:-3897514 | MS.gene009485:CDS |
| TCGGAGCCATCCGTTCAATC+CGG | 0.541521 | 3.2:-3893688 | MS.gene009485:CDS |
| TCAGGGTGAACTTATTTGCA+AGG | 0.543023 | 3.2:-3895548 | MS.gene009485:intron |
| CCGCATGTCCCAAATCCGAC+AGG | 0.548918 | 3.2:+3893748 | None:intergenic |
| ACTTGCCATCGGAAGAATGC+CGG | 0.550082 | 3.2:+3893669 | None:intergenic |
| TCAATCCGGCATTCTTCCGA+TGG | 0.550539 | 3.2:-3893674 | MS.gene009485:CDS |
| AAAGGGTTATTCACCTCTGA+TGG | 0.553941 | 3.2:+3895829 | None:intergenic |
| GCCTTAGCATCACCAGAGAA+AGG | 0.557742 | 3.2:-3897488 | MS.gene009485:CDS |
| GAGTACTTCAGAACTTGTGC+AGG | 0.558524 | 3.2:+3895873 | None:intergenic |
| AACCTTTGCTACTGGAAACC+AGG | 0.567978 | 3.2:-3893777 | MS.gene009485:CDS |
| TATACATGCACAAAATCTGC+AGG | 0.568505 | 3.2:+3893629 | None:intergenic |
| AGACTCACATTCACTGGCCA+GGG | 0.568609 | 3.2:+3894265 | None:intergenic |
| ACATCCTGGAAGTCTATTGG+AGG | 0.572776 | 3.2:-3895635 | MS.gene009485:CDS |
| AGGTGAGTCATAAATCTCAA+TGG | 0.572927 | 3.2:+3894477 | None:intergenic |
| ATTCAGCATCACCACCTTGG+CGG | 0.573903 | 3.2:+3897859 | None:intergenic |
| CACAGTTCTCAGTGACACAC+TGG | 0.574143 | 3.2:-3895906 | MS.gene009485:CDS |
| CATCATCATGGAATCCCGAT+GGG | 0.574164 | 3.2:-3893802 | MS.gene009485:CDS |
| AGTAGCAAAGGTTACCCCAT+CGG | 0.575325 | 3.2:+3893787 | None:intergenic |
| GAAAATATGTCTCACCGCCA+AGG | 0.576555 | 3.2:-3897873 | None:intergenic |
| TTCAGGGGACAGGTCAGGGA+AGG | 0.578143 | 3.2:-3897415 | MS.gene009485:intron |
| GCATCACCAGAGAAAGGTAT+CGG | 0.579593 | 3.2:-3897482 | MS.gene009485:CDS |
| GATAATCTTCTGGTTGCTGG+AGG | 0.580685 | 3.2:-3895574 | MS.gene009485:CDS |
| GCAGTGTTGAAGGGAAATCT+CGG | 0.584746 | 3.2:-3893707 | MS.gene009485:CDS |
| GGTGAATCTATTAATAGAGA+GGG | 0.585636 | 3.2:-3897783 | MS.gene009485:CDS |
| AGAATGCCGGATTGAACGGA+TGG | 0.586242 | 3.2:+3893682 | None:intergenic |
| AAGTCAGTGGCAGTGTTGAA+GGG | 0.588027 | 3.2:-3893716 | MS.gene009485:CDS |
| AATATTCAGCATCACCACCT+TGG | 0.588906 | 3.2:+3897856 | None:intergenic |
| CATGTATATGACGTGAAAAG+TGG | 0.589414 | 3.2:-3893614 | MS.gene009485:CDS |
| TCACTGAGAACTGTGACATA+AGG | 0.591263 | 3.2:+3895914 | None:intergenic |
| GGTATGAGTAATTATGGCGC+AGG | 0.592065 | 3.2:+3893468 | None:intergenic |
| TGGTGAATCTATTAATAGAG+AGG | 0.592341 | 3.2:-3897784 | MS.gene009485:CDS |
| CTTGAGCAAAAGCTGACACC+AGG | 0.594740 | 3.2:+3894532 | None:intergenic |
| CATACTTCTCTCAGTCCAGA+TGG | 0.594886 | 3.2:-3894045 | MS.gene009485:CDS |
| TGGACACGTTGCACCATCAG+AGG | 0.597064 | 3.2:-3895842 | MS.gene009485:intron |
| ACAGCTGCTCAAGCAAGAAG+AGG | 0.600613 | 3.2:-3897540 | MS.gene009485:CDS |
| CATCCTGGAAGTCTATTGGA+GGG | 0.605352 | 3.2:-3895634 | MS.gene009485:CDS |
| GATTGTAAAAGCACGGACAA+AGG | 0.607503 | 3.2:-3896463 | MS.gene009485:CDS |
| GCATCATCATGGAATCCCGA+TGG | 0.607878 | 3.2:-3893803 | MS.gene009485:CDS |
| GGTTGACTCTCAAAATGGAA+AGG | 0.608076 | 3.2:-3893980 | MS.gene009485:intron |
| TTGAGATTTATGACTCACCT+AGG | 0.613462 | 3.2:-3894474 | MS.gene009485:intron |
| TGCGGATGAATATGAAATGG+AGG | 0.616643 | 3.2:-3897832 | MS.gene009485:CDS |
| CTGACCTGTCCCCTGAATGG+GGG | 0.619493 | 3.2:+3897421 | None:intergenic |
| AGAAGAGGACAAGACATCCA+GGG | 0.624570 | 3.2:-3897525 | MS.gene009485:CDS |
| CAAACAGGATTGTAAAAGCA+CGG | 0.625588 | 3.2:-3896470 | MS.gene009485:intron |
| GGCGCAGGCCATATTCGAGA+AGG | 0.628359 | 3.2:+3893483 | None:intergenic |
| TGTAGATGAATATGATTACT+CGG | 0.633196 | 3.2:-3897742 | MS.gene009485:intron |
| ATCCTGGAAGTCTATTGGAG+GGG | 0.633313 | 3.2:-3895633 | MS.gene009485:CDS |
| ATATTCATCTACATCAGACT+CGG | 0.638509 | 3.2:+3897752 | None:intergenic |
| ATATGAAATGGAGGATGTAG+AGG | 0.641938 | 3.2:-3897823 | MS.gene009485:CDS |
| GAATCTATTAATAGAGAGGG+AGG | 0.642631 | 3.2:-3897780 | MS.gene009485:CDS |
| CCTGTCGGATTTGGGACATG+CGG | 0.645322 | 3.2:-3893748 | MS.gene009485:CDS |
| AGACAATCCTGAAAGTATGT+TGG | 0.648208 | 3.2:-3894001 | MS.gene009485:CDS |
| TATAGCCATATACTTGCCAT+CGG | 0.653031 | 3.2:+3893658 | None:intergenic |
| GCGGAATTTATCCAAGTCAG+TGG | 0.655008 | 3.2:-3893729 | MS.gene009485:CDS |
| GAAGAGGACAAGACATCCAG+GGG | 0.669643 | 3.2:-3897524 | MS.gene009485:CDS |
| ATGCAGCACCTAGATCGACC+TGG | 0.674184 | 3.2:-3894550 | MS.gene009485:intron |
| ATGTATATGACGTGAAAAGT+GGG | 0.674883 | 3.2:-3893613 | MS.gene009485:CDS |
| ATCATCATGGAATCCCGATG+GGG | 0.681047 | 3.2:-3893801 | MS.gene009485:CDS |
| GAAACCAGGACAAAACCTGT+CGG | 0.683580 | 3.2:-3893763 | MS.gene009485:CDS |
| GTGATGCTAAGGCTATCCCA+AGG | 0.695903 | 3.2:+3897498 | None:intergenic |
| AATATGTCTCACCGCCAAGG+TGG | 0.740247 | 3.2:-3897870 | MS.gene009485:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAACTATAAAAAAAC+AGG | + | chr3.2:3896658-3896677 | None:intergenic | 10.0% |
| !! | AGCATAAAAAAAAAAAAAAA+AGG | + | chr3.2:3895336-3895355 | None:intergenic | 10.0% |
| !! | ATAAAAAAAAAAAAAAAAGG+GGG | + | chr3.2:3895333-3895352 | None:intergenic | 10.0% |
| !! | CATAAAAAAAAAAAAAAAAG+GGG | + | chr3.2:3895334-3895353 | None:intergenic | 10.0% |
| !! | GCATAAAAAAAAAAAAAAAA+GGG | + | chr3.2:3895335-3895354 | None:intergenic | 10.0% |
| !!! | ATATTTTTAATAATGGATAT+TGG | - | chr3.2:3896898-3896917 | MS.gene009485:intron | 10.0% |
| !! | ATAAATAAGATTTATGTTCT+GGG | - | chr3.2:3896345-3896364 | MS.gene009485:intron | 15.0% |
| !! | TATAAATAAGATTTATGTTC+TGG | - | chr3.2:3896344-3896363 | MS.gene009485:intron | 15.0% |
| !! | TATCAAAATAATTAAAGAGA+AGG | + | chr3.2:3896881-3896900 | None:intergenic | 15.0% |
| !! | TATTATTATCTATATCAAAC+AGG | - | chr3.2:3894833-3894852 | MS.gene009485:intron | 15.0% |
| !! | TGATATAGATAATAATAAAC+AGG | + | chr3.2:3894830-3894849 | None:intergenic | 15.0% |
| !!! | TCTGAAATATCAAAAAAAAA+AGG | + | chr3.2:3893942-3893961 | None:intergenic | 15.0% |
| !! | AAAACATAAAACAAATCCTA+TGG | + | chr3.2:3896703-3896722 | None:intergenic | 20.0% |
| !! | AAACATAAAACAAATCCTAT+GGG | + | chr3.2:3896702-3896721 | None:intergenic | 20.0% |
| !! | AGAATATAAATAGAAAGCAA+AGG | + | chr3.2:3897224-3897243 | None:intergenic | 20.0% |
| !! | ATAACTACAATATTACTCAT+AGG | + | chr3.2:3893729-3893748 | None:intergenic | 20.0% |
| !! | CTAAAATTGTTCATTTAAGA+GGG | + | chr3.2:3897113-3897132 | None:intergenic | 20.0% |
| !! | CTTAAAATTGTGAGATATTT+AGG | + | chr3.2:3896402-3896421 | None:intergenic | 20.0% |
| !! | TAAAATTGTTCATTTAAGAG+GGG | + | chr3.2:3897112-3897131 | None:intergenic | 20.0% |
| !! | TAACTACAATATTACTCATA+GGG | + | chr3.2:3893728-3893747 | None:intergenic | 20.0% |
| !! | TATGAGTAATATTGTAGTTA+TGG | - | chr3.2:3893728-3893747 | MS.gene009485:CDS | 20.0% |
| !! | TGATGAATTATTTACTTAGA+AGG | + | chr3.2:3893677-3893696 | None:intergenic | 20.0% |
| !!! | AAATGAACAATTTTAGCATT+AGG | - | chr3.2:3897117-3897136 | MS.gene009485:intron | 20.0% |
| !!! | TTTTCAGGTAATATTGTAAA+AGG | - | chr3.2:3896007-3896026 | MS.gene009485:intron | 20.0% |
| !!! | TTTTTCATTCATGTTATCTA+TGG | - | chr3.2:3896565-3896584 | MS.gene009485:intron | 20.0% |
| ! | AAATATAATCGCTATGACAT+AGG | - | chr3.2:3894521-3894540 | MS.gene009485:CDS | 25.0% |
| ! | AACATAAAACAAATCCTATG+GGG | + | chr3.2:3896701-3896720 | None:intergenic | 25.0% |
| ! | AACTTCTTTAATCATGTCAT+TGG | - | chr3.2:3893966-3893985 | MS.gene009485:intron | 25.0% |
| ! | AATAATAAACAGGTAAGCAT+AGG | + | chr3.2:3894820-3894839 | None:intergenic | 25.0% |
| ! | AATATAATCGCTATGACATA+GGG | - | chr3.2:3894522-3894541 | MS.gene009485:CDS | 25.0% |
| ! | AATCAAGGTATGAGTAATTA+TGG | + | chr3.2:3897859-3897878 | None:intergenic | 25.0% |
| ! | AGTAGATAAGAAAAACATAG+AGG | + | chr3.2:3894337-3894356 | None:intergenic | 25.0% |
| ! | ATAATACTAAGTATATCTCC+TGG | + | chr3.2:3894478-3894497 | None:intergenic | 25.0% |
| ! | ATGTTTATATCATAGTCATC+TGG | + | chr3.2:3894795-3894814 | None:intergenic | 25.0% |
| ! | ATTGATTATTTGACCGAAAA+GGG | + | chr3.2:3897376-3897395 | None:intergenic | 25.0% |
| ! | GCTAAAATTGTTCATTTAAG+AGG | + | chr3.2:3897114-3897133 | None:intergenic | 25.0% |
| ! | GTGTGTTAAATCAATAATCA+CGG | + | chr3.2:3896926-3896945 | None:intergenic | 25.0% |
| ! | TGAATTATTTACTTAGAAGG+AGG | + | chr3.2:3893674-3893693 | None:intergenic | 25.0% |
| ! | TGTAGATGAATATGATTACT+CGG | - | chr3.2:3893576-3893595 | MS.gene009485:CDS | 25.0% |
| ! | TGTTATGAATATGATGTACA+TGG | - | chr3.2:3893640-3893659 | MS.gene009485:CDS | 25.0% |
| ! | TTCAGTAACAAAGAAAGTAA+TGG | + | chr3.2:3896748-3896767 | None:intergenic | 25.0% |
| ! | TTTAAAAAGTGAGATATCAC+TGG | - | chr3.2:3894242-3894261 | MS.gene009485:intron | 25.0% |
| ! | TTTCATCTATGTAAAGATAC+TGG | - | chr3.2:3896042-3896061 | MS.gene009485:intron | 25.0% |
| !! | ATCAACAATTCTTCATTTTC+AGG | - | chr3.2:3894920-3894939 | MS.gene009485:intron | 25.0% |
| !! | ATGAGCATTGCTTTAATAAT+TGG | - | chr3.2:3896458-3896477 | MS.gene009485:CDS | 25.0% |
| !! | GAACAAGAAATTGATTTCTT+TGG | - | chr3.2:3897737-3897756 | MS.gene009485:intron | 25.0% |
| !! | GATACTCATTTTATGAGTTT+AGG | - | chr3.2:3894877-3894896 | MS.gene009485:intron | 25.0% |
| !! | GTCAGAAAAATTTTATCTTG+TGG | - | chr3.2:3895099-3895118 | MS.gene009485:intron | 25.0% |
| !!! | AAGATTTTGACGTTGATTAA+AGG | + | chr3.2:3896073-3896092 | None:intergenic | 25.0% |
| !!! | AAGTAAAAGCATTAGGTAAA+GGG | + | chr3.2:3895509-3895528 | None:intergenic | 25.0% |
| !!! | ACGATTTTTAGCATTTTCTT+AGG | + | chr3.2:3894398-3894417 | None:intergenic | 25.0% |
| !!! | AGATTTTGACGTTGATTAAA+GGG | + | chr3.2:3896072-3896091 | None:intergenic | 25.0% |
| !!! | AGTCATCATTTTTGTAAAAG+AGG | + | chr3.2:3896150-3896169 | None:intergenic | 25.0% |
| !!! | ATAATCTCTACTTTGTTTTG+TGG | - | chr3.2:3895822-3895841 | MS.gene009485:intron | 25.0% |
| !!! | ATAGTCAATACGTCTTTTTT+TGG | - | chr3.2:3894593-3894612 | MS.gene009485:intron | 25.0% |
| !!! | ATATCTCACTTTTTAAAGCA+AGG | + | chr3.2:3894239-3894258 | None:intergenic | 25.0% |
| !!! | GCATTTTTTTAAATCTGTTG+TGG | - | chr3.2:3895850-3895869 | MS.gene009485:CDS | 25.0% |
| AAAAAACAGGTAGAGTCTAA+TGG | + | chr3.2:3896645-3896664 | None:intergenic | 30.0% | |
| AAAAACAGGTAGAGTCTAAT+GGG | + | chr3.2:3896644-3896663 | None:intergenic | 30.0% | |
| ACAGCATCAAATAATGATTG+TGG | - | chr3.2:3896978-3896997 | MS.gene009485:intron | 30.0% | |
| ACATAAAACAAATCCTATGG+GGG | + | chr3.2:3896700-3896719 | None:intergenic | 30.0% | |
| AGAAGGAAAACTAAATACCT+AGG | + | chr3.2:3896864-3896883 | None:intergenic | 30.0% | |
| AGCATTGCTTTAATAATTGG+TGG | - | chr3.2:3896461-3896480 | MS.gene009485:CDS | 30.0% | |
| AGGTGAGTAAACTAAATTAG+AGG | + | chr3.2:3894317-3894336 | None:intergenic | 30.0% | |
| ATATAATCGCTATGACATAG+GGG | - | chr3.2:3894523-3894542 | MS.gene009485:CDS | 30.0% | |
| ATATTCATCTACATCAGACT+CGG | + | chr3.2:3893569-3893588 | None:intergenic | 30.0% | |
| ATGTATATGACGTGAAAAGT+GGG | - | chr3.2:3897705-3897724 | MS.gene009485:intron | 30.0% | |
| ATTATTCATTCGCATCATCA+TGG | - | chr3.2:3897504-3897523 | MS.gene009485:CDS | 30.0% | |
| CAGATTCCTTTCATGAAATT+GGG | + | chr3.2:3894105-3894124 | None:intergenic | 30.0% | |
| CATTATGTTCAAATGTTTCG+CGG | + | chr3.2:3895911-3895930 | None:intergenic | 30.0% | |
| GACAGTAAAATACTTGATTG+CGG | - | chr3.2:3895121-3895140 | MS.gene009485:intron | 30.0% | |
| GAGGATGAAATTGATATTGA+TGG | - | chr3.2:3893514-3893533 | MS.gene009485:CDS | 30.0% | |
| GAGTAATATTGTAGTTATGG+TGG | - | chr3.2:3893731-3893750 | MS.gene009485:CDS | 30.0% | |
| GATTGATTATTTGACCGAAA+AGG | + | chr3.2:3897377-3897396 | None:intergenic | 30.0% | |
| GGTGAATCTATTAATAGAGA+GGG | - | chr3.2:3893535-3893554 | MS.gene009485:CDS | 30.0% | |
| TATCTATGGTTCAGCTAATT+AGG | - | chr3.2:3896579-3896598 | MS.gene009485:intron | 30.0% | |
| TGAGAAGTAGCTAAAAACTA+AGG | + | chr3.2:3896527-3896546 | None:intergenic | 30.0% | |
| TGCAGTAAAAGATAATCTTC+TGG | - | chr3.2:3895734-3895753 | MS.gene009485:intron | 30.0% | |
| TGGAATCAGAAACTTTGATA+TGG | - | chr3.2:3896998-3897017 | MS.gene009485:intron | 30.0% | |
| TGGTGAATCTATTAATAGAG+AGG | - | chr3.2:3893534-3893553 | MS.gene009485:CDS | 30.0% | |
| TTATGCTCAATTAAAACAGC+TGG | + | chr3.2:3894146-3894165 | None:intergenic | 30.0% | |
| TTGAAATTGTATAGACCACA+TGG | - | chr3.2:3896426-3896445 | MS.gene009485:CDS | 30.0% | |
| TTTAACTACTACACTTGCAT+TGG | - | chr3.2:3894205-3894224 | MS.gene009485:intron | 30.0% | |
| ! | AAGTAATGGAAGTATATCAG+CGG | + | chr3.2:3896734-3896753 | None:intergenic | 30.0% |
| ! | AGCTTTGTAGGTATATTTGA+GGG | + | chr3.2:3894700-3894719 | None:intergenic | 30.0% |
| ! | AGTTCTGCATATGCATATTT+TGG | - | chr3.2:3896609-3896628 | MS.gene009485:intron | 30.0% |
| ! | ATCTACTCTGGTTTCTATAA+TGG | - | chr3.2:3894958-3894977 | MS.gene009485:intron | 30.0% |
| ! | TTTTATTGTCAGAAACATCC+TGG | - | chr3.2:3895669-3895688 | MS.gene009485:intron | 30.0% |
| ! | TTTTGCGGATGAATATGAAA+TGG | - | chr3.2:3893483-3893502 | MS.gene009485:CDS | 30.0% |
| ! | TTTTTATGCTTATGCAGTTG+AGG | - | chr3.2:3895346-3895365 | MS.gene009485:intron | 30.0% |
| !! | ATCATTTTTGTAAAAGAGGC+TGG | + | chr3.2:3896146-3896165 | None:intergenic | 30.0% |
| !! | CAAGTAAAAGCATTAGGTAA+AGG | + | chr3.2:3895510-3895529 | None:intergenic | 30.0% |
| !! | CTGGTTTCTATAATGGATTA+AGG | - | chr3.2:3894965-3894984 | MS.gene009485:intron | 30.0% |
| !! | TGGTAATGAGTAACTTTTTC+AGG | - | chr3.2:3895992-3896011 | MS.gene009485:intron | 30.0% |
| !!! | TAGTTTTTAGCTACTTCTCA+AGG | - | chr3.2:3896527-3896546 | MS.gene009485:intron | 30.0% |
| AAAACTAAGGCTCGAATTGA+AGG | + | chr3.2:3896514-3896533 | None:intergenic | 35.0% | |
| AAATTGTGCAGTCTGTTCAT+AGG | - | chr3.2:3895234-3895253 | MS.gene009485:intron | 35.0% | |
| AGACTATTGCTCCATTATCT+GGG | - | chr3.2:3897474-3897493 | MS.gene009485:CDS | 35.0% | |
| AGGAAAAAATGTCGCAATCA+AGG | + | chr3.2:3894378-3894397 | None:intergenic | 35.0% | |
| AGGAAACATTGCTTACACTT+AGG | - | chr3.2:3897137-3897156 | MS.gene009485:intron | 35.0% | |
| AGGTGAGTCATAAATCTCAA+TGG | + | chr3.2:3896844-3896863 | None:intergenic | 35.0% | |
| ATAGAAACCAGAGTAGATAC+AGG | + | chr3.2:3894956-3894975 | None:intergenic | 35.0% | |
| ATATGAAATGGAGGATGTAG+AGG | - | chr3.2:3893495-3893514 | MS.gene009485:CDS | 35.0% | |
| ATGAAAATATCCCCCATTCA+GGG | - | chr3.2:3893887-3893906 | MS.gene009485:intron | 35.0% | |
| ATGAGGCTGTTAATATCATG+TGG | + | chr3.2:3896200-3896219 | None:intergenic | 35.0% | |
| ATTGACTATGTATACCCCAA+TGG | + | chr3.2:3894582-3894601 | None:intergenic | 35.0% | |
| CAAACAGGATTGTAAAAGCA+CGG | - | chr3.2:3894848-3894867 | MS.gene009485:intron | 35.0% | |
| CATGTATATGACGTGAAAAG+TGG | - | chr3.2:3897704-3897723 | MS.gene009485:intron | 35.0% | |
| CTTTGTAGGTATATTTGAGG+GGG | + | chr3.2:3894698-3894717 | None:intergenic | 35.0% | |
| GAATCTATTAATAGAGAGGG+AGG | - | chr3.2:3893538-3893557 | MS.gene009485:CDS | 35.0% | |
| GATTTCTTTGGTGAGATATC+AGG | - | chr3.2:3897749-3897768 | MS.gene009485:CDS | 35.0% | |
| GCAGATTCCTTTCATGAAAT+TGG | + | chr3.2:3894106-3894125 | None:intergenic | 35.0% | |
| GCTCATTAAATAGTTCCATG+TGG | + | chr3.2:3896444-3896463 | None:intergenic | 35.0% | |
| GCTTTGTAGGTATATTTGAG+GGG | + | chr3.2:3894699-3894718 | None:intergenic | 35.0% | |
| GTCATAAATCTCAATGGCAT+TGG | + | chr3.2:3896838-3896857 | None:intergenic | 35.0% | |
| GTGGTGCAACATGATTTAAA+GGG | + | chr3.2:3895538-3895557 | None:intergenic | 35.0% | |
| TAATCTAAGTGCCCAGATAA+TGG | + | chr3.2:3897488-3897507 | None:intergenic | 35.0% | |
| TAGGACATTTAACTGCACAA+TGG | - | chr3.2:3894994-3895013 | MS.gene009485:intron | 35.0% | |
| TATACATGCACAAAATCTGC+AGG | + | chr3.2:3897692-3897711 | None:intergenic | 35.0% | |
| TATAGCCATATACTTGCCAT+CGG | + | chr3.2:3897663-3897682 | None:intergenic | 35.0% | |
| TATGAAAATATCCCCCATTC+AGG | - | chr3.2:3893886-3893905 | MS.gene009485:intron | 35.0% | |
| TCCAATTTCGATGCTATATG+AGG | + | chr3.2:3896217-3896236 | None:intergenic | 35.0% | |
| TGTGGTGAATTATGTAACGA+TGG | + | chr3.2:3894018-3894037 | None:intergenic | 35.0% | |
| TGTTCATTTAAGAGGGGATA+GGG | + | chr3.2:3897106-3897125 | None:intergenic | 35.0% | |
| TTGAGATTTATGACTCACCT+AGG | - | chr3.2:3896844-3896863 | MS.gene009485:intron | 35.0% | |
| TTGATTTAACACACCTTTCC+TGG | - | chr3.2:3896932-3896951 | MS.gene009485:intron | 35.0% | |
| TTGTTCATTTAAGAGGGGAT+AGG | + | chr3.2:3897107-3897126 | None:intergenic | 35.0% | |
| ! | AAAGATAATCTTCTGGTTGC+TGG | - | chr3.2:3895741-3895760 | MS.gene009485:intron | 35.0% |
| ! | ACCTTCAAAGTATTTAGTGG+CGG | + | chr3.2:3894723-3894742 | None:intergenic | 35.0% |
| ! | AGACAATCCTGAAAGTATGT+TGG | - | chr3.2:3897317-3897336 | MS.gene009485:intron | 35.0% |
| ! | ATACCGAATCCCTTTTCATT+GGG | - | chr3.2:3897789-3897808 | MS.gene009485:CDS | 35.0% |
| ! | ATCGAAATTGGATGATGATG+TGG | - | chr3.2:3896225-3896244 | MS.gene009485:intron | 35.0% |
| ! | ATGTTGGTTGACTCTCAAAA+TGG | - | chr3.2:3897333-3897352 | MS.gene009485:intron | 35.0% |
| ! | ATTCTTTTCAGTGTGTGGTA+TGG | + | chr3.2:3894766-3894785 | None:intergenic | 35.0% |
| ! | ATTTTTGTAAAAGAGGCTGG+CGG | + | chr3.2:3896143-3896162 | None:intergenic | 35.0% |
| ! | GAGCTTTGTAGGTATATTTG+AGG | + | chr3.2:3894701-3894720 | None:intergenic | 35.0% |
| ! | GCAACCTTCAAAGTATTTAG+TGG | + | chr3.2:3894726-3894745 | None:intergenic | 35.0% |
| ! | TCACAATTCTTTTCAGTGTG+TGG | + | chr3.2:3894771-3894790 | None:intergenic | 35.0% |
| ! | TCTGAAGTACTCAATGTTTC+TGG | - | chr3.2:3895456-3895475 | MS.gene009485:intron | 35.0% |
| ! | TTCTTTTCAGTGTGTGGTAT+GGG | + | chr3.2:3894765-3894784 | None:intergenic | 35.0% |
| !! | AAGGATTGGTTTGCAACTAA+GGG | + | chr3.2:3894445-3894464 | None:intergenic | 35.0% |
| !! | GCTATGCAAGTAAAAGCATT+AGG | + | chr3.2:3895516-3895535 | None:intergenic | 35.0% |
| !! | TAAGGATTGGTTTGCAACTA+AGG | + | chr3.2:3894446-3894465 | None:intergenic | 35.0% |
| !! | TAATGGATTAAGGATGCACT+AGG | - | chr3.2:3894975-3894994 | MS.gene009485:intron | 35.0% |
| !! | TGGTGATGCTGAATATTTTG+CGG | - | chr3.2:3893468-3893487 | MS.gene009485:CDS | 35.0% |
| !!! | GTCAATACGTCTTTTTTTGG+TGG | - | chr3.2:3894596-3894615 | MS.gene009485:intron | 35.0% |
| AAAGGGTTATTCACCTCTGA+TGG | + | chr3.2:3895492-3895511 | None:intergenic | 40.0% | |
| AACCCCAATGAAAAGGGATT+CGG | + | chr3.2:3897795-3897814 | None:intergenic | 40.0% | |
| AATATTCAGCATCACCACCT+TGG | + | chr3.2:3893465-3893484 | None:intergenic | 40.0% | |
| AATTGTTAGCGAGAACTGTG+AGG | - | chr3.2:3895173-3895192 | MS.gene009485:intron | 40.0% | |
| ACAGCAAACAAAGTGAAGTG+GGG | + | chr3.2:3896291-3896310 | None:intergenic | 40.0% | |
| ATCAGAAGTAGCTTACCATC+TGG | + | chr3.2:3897291-3897310 | None:intergenic | 40.0% | |
| ATCCCAAACCCCAATGAAAA+GGG | + | chr3.2:3897801-3897820 | None:intergenic | 40.0% | |
| CACAGCAAACAAAGTGAAGT+GGG | + | chr3.2:3896292-3896311 | None:intergenic | 40.0% | |
| CAGACTATTGCTCCATTATC+TGG | - | chr3.2:3897473-3897492 | MS.gene009485:CDS | 40.0% | |
| CAGAGACTTAGGACTTTACA+GGG | + | chr3.2:3896107-3896126 | None:intergenic | 40.0% | |
| GAAACATCCTGGAAGTCTAT+TGG | - | chr3.2:3895680-3895699 | MS.gene009485:intron | 40.0% | |
| GAGTCAACCAACATACTTTC+AGG | + | chr3.2:3897327-3897346 | None:intergenic | 40.0% | |
| GCTGTTAATATCATGTGGCA+TGG | + | chr3.2:3896195-3896214 | None:intergenic | 40.0% | |
| GCTTATGCAGTTGAGGAATT+TGG | - | chr3.2:3895353-3895372 | MS.gene009485:intron | 40.0% | |
| GGTAAGCTACTTCTGATTGT+TGG | - | chr3.2:3897294-3897313 | MS.gene009485:intron | 40.0% | |
| GGTGGTGCAACATGATTTAA+AGG | + | chr3.2:3895539-3895558 | None:intergenic | 40.0% | |
| TACACTTAGGCTGTACTGTA+TGG | - | chr3.2:3897150-3897169 | MS.gene009485:intron | 40.0% | |
| TATCATGTGGCATGGCAATA+TGG | + | chr3.2:3896187-3896206 | None:intergenic | 40.0% | |
| TATGGTAGCCTTCTCGAATA+TGG | - | chr3.2:3897827-3897846 | MS.gene009485:CDS | 40.0% | |
| TCACTGAGAACTGTGACATA+AGG | + | chr3.2:3895407-3895426 | None:intergenic | 40.0% | |
| TCAGGGTGAACTTATTTGCA+AGG | - | chr3.2:3895770-3895789 | MS.gene009485:intron | 40.0% | |
| TCCGCCACTAAATACTTTGA+AGG | - | chr3.2:3894719-3894738 | MS.gene009485:intron | 40.0% | |
| TGAAAATATCCCCCATTCAG+GGG | - | chr3.2:3893888-3893907 | MS.gene009485:intron | 40.0% | |
| TGCAGTTGAGGAATTTGGTT+TGG | - | chr3.2:3895358-3895377 | MS.gene009485:intron | 40.0% | |
| TGCGGATGAATATGAAATGG+AGG | - | chr3.2:3893486-3893505 | MS.gene009485:CDS | 40.0% | |
| TGCTGCAGCATAGCATAAAA+AGG | + | chr3.2:3897255-3897274 | None:intergenic | 40.0% | |
| TGTGAATCTTGAGTAGTACC+TGG | - | chr3.2:3895258-3895277 | MS.gene009485:intron | 40.0% | |
| TTCTTCCGATGGCAAGTATA+TGG | - | chr3.2:3897655-3897674 | MS.gene009485:intron | 40.0% | |
| ! | AATCCCTTTTCATTGGGGTT+TGG | - | chr3.2:3897795-3897814 | MS.gene009485:CDS | 40.0% |
| ! | AATGGAAGTATATCAGCGGA+TGG | + | chr3.2:3896730-3896749 | None:intergenic | 40.0% |
| ! | ATCCCTTTTCATTGGGGTTT+GGG | - | chr3.2:3897796-3897815 | MS.gene009485:CDS | 40.0% |
| ! | ATGAAAAGGGATTCGGTATC+TGG | + | chr3.2:3897788-3897807 | None:intergenic | 40.0% |
| ! | GATACCGAATCCCTTTTCAT+TGG | - | chr3.2:3897788-3897807 | MS.gene009485:CDS | 40.0% |
| ! | GATTGTAAAAGCACGGACAA+AGG | - | chr3.2:3894855-3894874 | MS.gene009485:intron | 40.0% |
| ! | GCAGTTGAGGAATTTGGTTT+GGG | - | chr3.2:3895359-3895378 | MS.gene009485:intron | 40.0% |
| ! | GCCTCATATAGCATCGAAAT+TGG | - | chr3.2:3896213-3896232 | MS.gene009485:intron | 40.0% |
| ! | GGTTGACTCTCAAAATGGAA+AGG | - | chr3.2:3897338-3897357 | MS.gene009485:intron | 40.0% |
| ! | TACCGAATCCCTTTTCATTG+GGG | - | chr3.2:3897790-3897809 | MS.gene009485:CDS | 40.0% |
| !! | AGGATTGGTTTGCAACTAAG+GGG | + | chr3.2:3894444-3894463 | None:intergenic | 40.0% |
| AAAGCAAAGGAGTCACAGTG+GGG | + | chr3.2:3897211-3897230 | None:intergenic | 45.0% | |
| AACCTTTGCTACTGGAAACC+AGG | - | chr3.2:3897541-3897560 | MS.gene009485:CDS | 45.0% | |
| AAGAAGAGGACAAGACATCC+AGG | - | chr3.2:3893792-3893811 | MS.gene009485:CDS | 45.0% | |
| AAGTATATCTCCTGGCGTAG+TGG | + | chr3.2:3894470-3894489 | None:intergenic | 45.0% | |
| ACATCCTGGAAGTCTATTGG+AGG | - | chr3.2:3895683-3895702 | MS.gene009485:intron | 45.0% | |
| AGAAAGCAAAGGAGTCACAG+TGG | + | chr3.2:3897213-3897232 | None:intergenic | 45.0% | |
| AGAAGAGGACAAGACATCCA+GGG | - | chr3.2:3893793-3893812 | MS.gene009485:CDS | 45.0% | |
| AGGACAAAACCTGTCGGATT+TGG | - | chr3.2:3897561-3897580 | MS.gene009485:CDS | 45.0% | |
| AGTAGCAAAGGTTACCCCAT+CGG | + | chr3.2:3897534-3897553 | None:intergenic | 45.0% | |
| AGTAGTACCTGGCATGTCAT+AGG | - | chr3.2:3895269-3895288 | MS.gene009485:intron | 45.0% | |
| AGTTTGCCGATACCTTTCTC+TGG | + | chr3.2:3893845-3893864 | None:intergenic | 45.0% | |
| ATAACCAAGATCCGCCATTG+GGG | - | chr3.2:3894565-3894584 | MS.gene009485:intron | 45.0% | |
| ATCATCATGGAATCCCGATG+GGG | - | chr3.2:3897517-3897536 | MS.gene009485:CDS | 45.0% | |
| ATCCTGGAAGTCTATTGGAG+GGG | - | chr3.2:3895685-3895704 | MS.gene009485:intron | 45.0% | |
| ATTCATAGAGAACCGTGGAC+CGG | - | chr3.2:3894038-3894057 | MS.gene009485:CDS | 45.0% | |
| CAGCAAACAAAGTGAAGTGG+GGG | + | chr3.2:3896290-3896309 | None:intergenic | 45.0% | |
| CATAACCAAGATCCGCCATT+GGG | - | chr3.2:3894564-3894583 | MS.gene009485:intron | 45.0% | |
| CATACTTCTCTCAGTCCAGA+TGG | - | chr3.2:3897273-3897292 | MS.gene009485:intron | 45.0% | |
| CATCATCATGGAATCCCGAT+GGG | - | chr3.2:3897516-3897535 | MS.gene009485:CDS | 45.0% | |
| CATCCTGGAAGTCTATTGGA+GGG | - | chr3.2:3895684-3895703 | MS.gene009485:intron | 45.0% | |
| CCACAATTCATAGAGAACCG+TGG | - | chr3.2:3894033-3894052 | MS.gene009485:CDS | 45.0% | |
| CCACAGCAAACAAAGTGAAG+TGG | + | chr3.2:3896293-3896312 | None:intergenic | 45.0% | |
| CCACGGTTCTCTATGAATTG+TGG | + | chr3.2:3894036-3894055 | None:intergenic | 45.0% | |
| GAAACCAGGACAAAACCTGT+CGG | - | chr3.2:3897555-3897574 | MS.gene009485:CDS | 45.0% | |
| GAAAGCAAAGGAGTCACAGT+GGG | + | chr3.2:3897212-3897231 | None:intergenic | 45.0% | |
| GAAAGTTGTAGCAACGCTCT+AGG | + | chr3.2:3896490-3896509 | None:intergenic | 45.0% | |
| GACTATGTATACCCCAATGG+CGG | + | chr3.2:3894579-3894598 | None:intergenic | 45.0% | |
| GAGTACTTCAGAACTTGTGC+AGG | + | chr3.2:3895448-3895467 | None:intergenic | 45.0% | |
| GATCCCAAACCCCAATGAAA+AGG | + | chr3.2:3897802-3897821 | None:intergenic | 45.0% | |
| GATTGCGGCTTCAAATCAAC+AGG | - | chr3.2:3895136-3895155 | MS.gene009485:intron | 45.0% | |
| GCAGACATGTGACTTACATG+TGG | - | chr3.2:3895972-3895991 | MS.gene009485:intron | 45.0% | |
| GCAGAGACTTAGGACTTTAC+AGG | + | chr3.2:3896108-3896127 | None:intergenic | 45.0% | |
| GCGGAATTTATCCAAGTCAG+TGG | - | chr3.2:3897589-3897608 | MS.gene009485:intron | 45.0% | |
| GGACAAAACCTGTCGGATTT+GGG | - | chr3.2:3897562-3897581 | MS.gene009485:CDS | 45.0% | |
| GGTATGAGTAATTATGGCGC+AGG | + | chr3.2:3897853-3897872 | None:intergenic | 45.0% | |
| GGTTCGCCCAATTTCATGAA+AGG | - | chr3.2:3894096-3894115 | MS.gene009485:intron | 45.0% | |
| GTAGCACGAGGTCTAAATGA+TGG | - | chr3.2:3895567-3895586 | MS.gene009485:CDS | 45.0% | |
| TAATCGCTATGACATAGGGG+TGG | - | chr3.2:3894526-3894545 | MS.gene009485:CDS | 45.0% | |
| TAGAACAAAGCTCCGGTGTA+CGG | + | chr3.2:3894290-3894309 | None:intergenic | 45.0% | |
| TCATAACCAAGATCCGCCAT+TGG | - | chr3.2:3894563-3894582 | MS.gene009485:intron | 45.0% | |
| TCCAAGAGACTCACATTCAC+TGG | + | chr3.2:3897062-3897081 | None:intergenic | 45.0% | |
| TCGCAATCAAGGCTTGAACT+CGG | + | chr3.2:3894367-3894386 | None:intergenic | 45.0% | |
| TTCAAAGCCTATGACATGCC+AGG | + | chr3.2:3895279-3895298 | None:intergenic | 45.0% | |
| TTCAGTGTGTGGTATGGGTT+CGG | + | chr3.2:3894760-3894779 | None:intergenic | 45.0% | |
| ! | AAGTCAGTGGCAGTGTTGAA+GGG | - | chr3.2:3897602-3897621 | MS.gene009485:intron | 45.0% |
| ! | ACACCTTTCCTGGTTTGTAG+TGG | - | chr3.2:3896942-3896961 | MS.gene009485:intron | 45.0% |
| ! | ACCTTTCTCTGGTGATGCTA+AGG | + | chr3.2:3893834-3893853 | None:intergenic | 45.0% |
| ! | AGGAGTGTAGAACAAAGCTC+CGG | + | chr3.2:3894297-3894316 | None:intergenic | 45.0% |
| ! | ATTTAGTGGCGGAGCTTTGT+AGG | + | chr3.2:3894712-3894731 | None:intergenic | 45.0% |
| ! | CCACTTCACTTTGTTTGCTG+TGG | - | chr3.2:3896290-3896309 | MS.gene009485:intron | 45.0% |
| ! | GATAATCTTCTGGTTGCTGG+AGG | - | chr3.2:3895744-3895763 | MS.gene009485:intron | 45.0% |
| ! | GCAGTGTTGAAGGGAAATCT+CGG | - | chr3.2:3897611-3897630 | MS.gene009485:intron | 45.0% |
| ! | GCATCACCAGAGAAAGGTAT+CGG | - | chr3.2:3893836-3893855 | MS.gene009485:CDS | 45.0% |
| ! | GTAGTACTCTACGCCCTTTT+CGG | - | chr3.2:3897360-3897379 | MS.gene009485:intron | 45.0% |
| !! | AAATCCGACAGGTTTTGTCC+TGG | + | chr3.2:3897562-3897581 | None:intergenic | 45.0% |
| !! | ACTTTGTTTGCTGTGGTGCT+TGG | - | chr3.2:3896297-3896316 | MS.gene009485:intron | 45.0% |
| !! | CAAAGCATTTCCGTTTTCCC+TGG | - | chr3.2:3897036-3897055 | MS.gene009485:intron | 45.0% |
| !! | GAGAAAGGTATCGGCAAACT+AGG | - | chr3.2:3893845-3893864 | MS.gene009485:CDS | 45.0% |
| !! | TTATTTATTATTTACATATT+TGG | - | chr3.2:3894672-3894691 | MS.gene009485:intron | 5.0% |
| !!! | TATTTTGATATTTTTAATAA+TGG | - | chr3.2:3896891-3896910 | MS.gene009485:intron | 5.0% |
| AACCCCTCCAATAGACTTCC+AGG | + | chr3.2:3895690-3895709 | None:intergenic | 50.0% | |
| AAGACATCCAGGGGATTCCT+TGG | - | chr3.2:3893803-3893822 | MS.gene009485:CDS | 50.0% | |
| AAGGAATCTGCGTACCAGAG+AGG | - | chr3.2:3894115-3894134 | MS.gene009485:intron | 50.0% | |
| ACAGCTGCTCAAGCAAGAAG+AGG | - | chr3.2:3893778-3893797 | MS.gene009485:CDS | 50.0% | |
| ACTTGCCATCGGAAGAATGC+CGG | + | chr3.2:3897652-3897671 | None:intergenic | 50.0% | |
| AGAATGCCGGATTGAACGGA+TGG | + | chr3.2:3897639-3897658 | None:intergenic | 50.0% | |
| AGACATCCAGGGGATTCCTT+GGG | - | chr3.2:3893804-3893823 | MS.gene009485:CDS | 50.0% | |
| AGACTCACATTCACTGGCCA+GGG | + | chr3.2:3897056-3897075 | None:intergenic | 50.0% | |
| ATCTCCTGGCGTAGTGGTTA+AGG | + | chr3.2:3894464-3894483 | None:intergenic | 50.0% | |
| ATTCAGCATCACCACCTTGG+CGG | + | chr3.2:3893462-3893481 | None:intergenic | 50.0% | |
| CAAACAAAGTGAAGTGGGGG+TGG | + | chr3.2:3896287-3896306 | None:intergenic | 50.0% | |
| CAATCCTTAACCACTACGCC+AGG | - | chr3.2:3894457-3894476 | MS.gene009485:intron | 50.0% | |
| CACAGTTCTCAGTGACACAC+TGG | - | chr3.2:3895412-3895431 | MS.gene009485:intron | 50.0% | |
| CATTCACTGGCCAGGGAAAA+CGG | + | chr3.2:3897049-3897068 | None:intergenic | 50.0% | |
| CGGAAGAATGCCGGATTGAA+CGG | + | chr3.2:3897643-3897662 | None:intergenic | 50.0% | |
| CTATGACATAGGGGTGGTCA+TGG | - | chr3.2:3894532-3894551 | MS.gene009485:CDS | 50.0% | |
| CTGGCGTAGTGGTTAAGGAT+TGG | + | chr3.2:3894459-3894478 | None:intergenic | 50.0% | |
| CTGGTTGCTGGAGGATTTCA+GGG | - | chr3.2:3895753-3895772 | MS.gene009485:intron | 50.0% | |
| CTTGAGCAAAAGCTGACACC+AGG | + | chr3.2:3896789-3896808 | None:intergenic | 50.0% | |
| GAACTGCACCACTACAAACC+AGG | + | chr3.2:3896953-3896972 | None:intergenic | 50.0% | |
| GAAGAGGACAAGACATCCAG+GGG | - | chr3.2:3893794-3893813 | MS.gene009485:CDS | 50.0% | |
| GATGGGGTAACCTTTGCTAC+TGG | - | chr3.2:3897533-3897552 | MS.gene009485:CDS | 50.0% | |
| GCACCACTACAAACCAGGAA+AGG | + | chr3.2:3896948-3896967 | None:intergenic | 50.0% | |
| GCATCATCATGGAATCCCGA+TGG | - | chr3.2:3897515-3897534 | MS.gene009485:CDS | 50.0% | |
| GCCAGTGAATGTGAGTCTCT+TGG | - | chr3.2:3897058-3897077 | MS.gene009485:intron | 50.0% | |
| GCCTTAGCATCACCAGAGAA+AGG | - | chr3.2:3893830-3893849 | MS.gene009485:CDS | 50.0% | |
| GCGAGGTGCAATACACTTGT+GGG | + | chr3.2:3894268-3894287 | None:intergenic | 50.0% | |
| GCGGATCTTGGTTATGACAG+GGG | + | chr3.2:3894560-3894579 | None:intergenic | 50.0% | |
| GCTATACATGTGTCCCCCAT+AGG | - | chr3.2:3896684-3896703 | MS.gene009485:intron | 50.0% | |
| GCTGTAGCCTGTATCTACTC+TGG | - | chr3.2:3894946-3894965 | MS.gene009485:intron | 50.0% | |
| GGCGGATCTTGGTTATGACA+GGG | + | chr3.2:3894561-3894580 | None:intergenic | 50.0% | |
| GGGAGCAAATGCAGAGACTT+AGG | + | chr3.2:3896118-3896137 | None:intergenic | 50.0% | |
| GTAGCAAAGGTTACCCCATC+GGG | + | chr3.2:3897533-3897552 | None:intergenic | 50.0% | |
| GTCCTGGTTTCCAGTAGCAA+AGG | + | chr3.2:3897546-3897565 | None:intergenic | 50.0% | |
| GTGATGCTAAGGCTATCCCA+AGG | + | chr3.2:3893823-3893842 | None:intergenic | 50.0% | |
| TCAATCCGGCATTCTTCCGA+TGG | - | chr3.2:3897644-3897663 | MS.gene009485:intron | 50.0% | |
| TCAGTGTGTGGTATGGGTTC+GGG | + | chr3.2:3894759-3894778 | None:intergenic | 50.0% | |
| TCTGGTTGCTGGAGGATTTC+AGG | - | chr3.2:3895752-3895771 | MS.gene009485:intron | 50.0% | |
| TGGGGTGGGAATAGATAACG+AGG | + | chr3.2:3897193-3897212 | None:intergenic | 50.0% | |
| TGTAAAAGAGGCTGGCGGTA+GGG | + | chr3.2:3896138-3896157 | None:intergenic | 50.0% | |
| TTAGACCTCGTGCTACGTGA+TGG | + | chr3.2:3895563-3895582 | None:intergenic | 50.0% | |
| TTGTAAAAGAGGCTGGCGGT+AGG | + | chr3.2:3896139-3896158 | None:intergenic | 50.0% | |
| ! | CAAGTCAGTGGCAGTGTTGA+AGG | - | chr3.2:3897601-3897620 | MS.gene009485:intron | 50.0% |
| ! | CTTCAACACTGCCACTGACT+TGG | + | chr3.2:3897603-3897622 | None:intergenic | 50.0% |
| ! | GGGGTTTGGGATCGTACTTA+TGG | - | chr3.2:3897809-3897828 | MS.gene009485:CDS | 50.0% |
| ! | TGGATGATGATGTGGCGTTG+AGG | - | chr3.2:3896233-3896252 | MS.gene009485:intron | 50.0% |
| ! | TGGCGGATCTTGGTTATGAC+AGG | + | chr3.2:3894562-3894581 | None:intergenic | 50.0% |
| !! | CTGGTGTCAGCTTTTGCTCA+AGG | - | chr3.2:3896787-3896806 | MS.gene009485:intron | 50.0% |
| !! | TATACCCCAATGGCGGATCT+TGG | + | chr3.2:3894572-3894591 | None:intergenic | 50.0% |
| !!! | AACAGCTGGTTTTGCCTCTC+TGG | + | chr3.2:3894132-3894151 | None:intergenic | 50.0% |
| AAGTGAAGTGGGGGTGGCAA+TGG | + | chr3.2:3896281-3896300 | None:intergenic | 55.0% | |
| AGCTGACACCAGGTCGATCT+AGG | + | chr3.2:3896779-3896798 | None:intergenic | 55.0% | |
| ATATCCCCCATTCAGGGGAC+AGG | - | chr3.2:3893893-3893912 | MS.gene009485:intron | 55.0% | |
| ATGCAGCACCTAGATCGACC+TGG | - | chr3.2:3896768-3896787 | MS.gene009485:intron | 55.0% | |
| CAAAGGAGTCACAGTGGGGT+GGG | + | chr3.2:3897207-3897226 | None:intergenic | 55.0% | |
| GAGACTCACATTCACTGGCC+AGG | + | chr3.2:3897057-3897076 | None:intergenic | 55.0% | |
| GGCGAGGTGCAATACACTTG+TGG | + | chr3.2:3894269-3894288 | None:intergenic | 55.0% | |
| GTGGTATGGGTTCGGGTATG+TGG | + | chr3.2:3894752-3894771 | None:intergenic | 55.0% | |
| TATTGCACCTCGCCGTACAC+CGG | - | chr3.2:3894275-3894294 | MS.gene009485:CDS | 55.0% | |
| TCGGAGCCATCCGTTCAATC+CGG | - | chr3.2:3897630-3897649 | MS.gene009485:intron | 55.0% | |
| TGGACACGTTGCACCATCAG+AGG | - | chr3.2:3895476-3895495 | MS.gene009485:intron | 55.0% | |
| ! | CCTGTCGGATTTGGGACATG+CGG | - | chr3.2:3897570-3897589 | MS.gene009485:intron | 55.0% |
| ! | CTCGCGGCACTTTTGCAGAT+TGG | - | chr3.2:3894075-3894094 | MS.gene009485:intron | 55.0% |
| AGCACTCGCTAACCGGTCCA+CGG | + | chr3.2:3894053-3894072 | None:intergenic | 60.0% | |
| CACCACCATCACGTAGCACG+AGG | - | chr3.2:3895555-3895574 | MS.gene009485:CDS | 60.0% | |
| CCCATTCAGGGGACAGGTCA+GGG | - | chr3.2:3893899-3893918 | MS.gene009485:intron | 60.0% | |
| CCCTGACCTGTCCCCTGAAT+GGG | + | chr3.2:3893902-3893921 | None:intergenic | 60.0% | |
| CCGCATGTCCCAAATCCGAC+AGG | + | chr3.2:3897573-3897592 | None:intergenic | 60.0% | |
| CCTGACCTGTCCCCTGAATG+GGG | + | chr3.2:3893901-3893920 | None:intergenic | 60.0% | |
| CTGACCTGTCCCCTGAATGG+GGG | + | chr3.2:3893900-3893919 | None:intergenic | 60.0% | |
| GACCTCGTGCTACGTGATGG+TGG | + | chr3.2:3895560-3895579 | None:intergenic | 60.0% | |
| GCAAAGGAGTCACAGTGGGG+TGG | + | chr3.2:3897208-3897227 | None:intergenic | 60.0% | |
| GGCGCAGGCCATATTCGAGA+AGG | + | chr3.2:3897838-3897857 | None:intergenic | 60.0% | |
| GGCTATCCCAAGGAATCCCC+TGG | + | chr3.2:3893813-3893832 | None:intergenic | 60.0% | |
| TCCCTGACCTGTCCCCTGAA+TGG | + | chr3.2:3893903-3893922 | None:intergenic | 60.0% | |
| TGAAGTGGGGGTGGCAATGG+AGG | + | chr3.2:3896278-3896297 | None:intergenic | 60.0% | |
| TGGGGGTGGCAATGGAGGAT+GGG | + | chr3.2:3896273-3896292 | None:intergenic | 60.0% | |
| TTCAGGGGACAGGTCAGGGA+AGG | - | chr3.2:3893903-3893922 | MS.gene009485:intron | 60.0% | |
| !! | CTCGTGCTACGTGATGGTGG+TGG | + | chr3.2:3895557-3895576 | None:intergenic | 60.0% |
| CAAAGCTCCGGTGTACGGCG+AGG | + | chr3.2:3894285-3894304 | None:intergenic | 65.0% | |
| CCCCATTCAGGGGACAGGTC+AGG | - | chr3.2:3893898-3893917 | MS.gene009485:intron | 65.0% | |
| GCGAGCCAGCACTCGCTAAC+CGG | + | chr3.2:3894060-3894079 | None:intergenic | 65.0% | |
| GTGGACCGGTTAGCGAGTGC+TGG | - | chr3.2:3894052-3894071 | MS.gene009485:intron | 65.0% | |
| GTGGGGGTGGCAATGGAGGA+TGG | + | chr3.2:3896274-3896293 | None:intergenic | 65.0% | |
| !! | GGTTAGCGAGTGCTGGCTCG+CGG | - | chr3.2:3894059-3894078 | MS.gene009485:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 3893451 | 3897889 | 3893451 | ID=MS.gene009485 |
| chr3.2 | mRNA | 3893451 | 3897889 | 3893451 | ID=MS.gene009485.t1;Parent=MS.gene009485 |
| chr3.2 | exon | 3897743 | 3897889 | 3897743 | ID=MS.gene009485.t1.exon1;Parent=MS.gene009485.t1 |
| chr3.2 | CDS | 3897743 | 3897889 | 3897743 | ID=cds.MS.gene009485.t1;Parent=MS.gene009485.t1 |
| chr3.2 | exon | 3897416 | 3897583 | 3897416 | ID=MS.gene009485.t1.exon2;Parent=MS.gene009485.t1 |
| chr3.2 | CDS | 3897416 | 3897583 | 3897416 | ID=cds.MS.gene009485.t1;Parent=MS.gene009485.t1 |
| chr3.2 | exon | 3896399 | 3896485 | 3896399 | ID=MS.gene009485.t1.exon3;Parent=MS.gene009485.t1 |
| chr3.2 | CDS | 3896399 | 3896485 | 3896399 | ID=cds.MS.gene009485.t1;Parent=MS.gene009485.t1 |
| chr3.2 | exon | 3895843 | 3895977 | 3895843 | ID=MS.gene009485.t1.exon4;Parent=MS.gene009485.t1 |
| chr3.2 | CDS | 3895843 | 3895977 | 3895843 | ID=cds.MS.gene009485.t1;Parent=MS.gene009485.t1 |
| chr3.2 | exon | 3895549 | 3895659 | 3895549 | ID=MS.gene009485.t1.exon5;Parent=MS.gene009485.t1 |
| chr3.2 | CDS | 3895549 | 3895659 | 3895549 | ID=cds.MS.gene009485.t1;Parent=MS.gene009485.t1 |
| chr3.2 | exon | 3894475 | 3894566 | 3894475 | ID=MS.gene009485.t1.exon6;Parent=MS.gene009485.t1 |
| chr3.2 | CDS | 3894475 | 3894566 | 3894475 | ID=cds.MS.gene009485.t1;Parent=MS.gene009485.t1 |
| chr3.2 | exon | 3894273 | 3894378 | 3894273 | ID=MS.gene009485.t1.exon7;Parent=MS.gene009485.t1 |
| chr3.2 | CDS | 3894273 | 3894378 | 3894273 | ID=cds.MS.gene009485.t1;Parent=MS.gene009485.t1 |
| chr3.2 | exon | 3893981 | 3894067 | 3893981 | ID=MS.gene009485.t1.exon8;Parent=MS.gene009485.t1 |
| chr3.2 | CDS | 3893981 | 3894067 | 3893981 | ID=cds.MS.gene009485.t1;Parent=MS.gene009485.t1 |
| chr3.2 | exon | 3893451 | 3893864 | 3893451 | ID=MS.gene009485.t1.exon9;Parent=MS.gene009485.t1 |
| chr3.2 | CDS | 3893451 | 3893864 | 3893451 | ID=cds.MS.gene009485.t1;Parent=MS.gene009485.t1 |
| Gene Sequence |
| Protein sequence |
