Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008767.t1 | RHN62234.1 | 96.8 | 313 | 10 | 0 | 1 | 313 | 142 | 454 | 4.80E-154 | 553.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008767.t1 | Q9LEB3 | 64.3 | 314 | 104 | 5 | 1 | 313 | 110 | 416 | 1.0e-104 | 381.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008767.t1 | A0A396IDA7 | 96.8 | 313 | 10 | 0 | 1 | 313 | 142 | 454 | 3.4e-154 | 553.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008767.t1 | MTR_4g086600 | 99.042 | 313 | 3 | 0 | 1 | 313 | 142 | 454 | 0.0 | 636 |
MS.gene008767.t1 | MTR_1g020080 | 61.039 | 308 | 99 | 4 | 1 | 307 | 123 | 410 | 5.82e-129 | 374 |
MS.gene008767.t1 | MTR_3g101370 | 60.194 | 309 | 102 | 4 | 1 | 307 | 119 | 408 | 1.01e-125 | 366 |
MS.gene008767.t1 | MTR_4g131970 | 54.921 | 315 | 104 | 6 | 1 | 303 | 100 | 388 | 2.89e-110 | 326 |
MS.gene008767.t1 | MTR_2g022950 | 59.420 | 276 | 93 | 4 | 1 | 275 | 86 | 343 | 3.35e-108 | 320 |
MS.gene008767.t1 | MTR_2g097960 | 52.885 | 312 | 128 | 5 | 1 | 298 | 41 | 347 | 2.50e-105 | 314 |
MS.gene008767.t1 | MTR_1g020080 | 61.000 | 200 | 58 | 3 | 1 | 200 | 123 | 302 | 2.21e-79 | 244 |
MS.gene008767.t1 | MTR_3g101370 | 59.487 | 195 | 60 | 3 | 1 | 195 | 119 | 294 | 2.37e-74 | 231 |
MS.gene008767.t1 | MTR_2g022950 | 67.532 | 154 | 45 | 2 | 1 | 153 | 86 | 235 | 1.29e-66 | 210 |
MS.gene008767.t1 | MTR_2g022950 | 67.532 | 154 | 45 | 2 | 1 | 153 | 86 | 235 | 5.57e-66 | 209 |
MS.gene008767.t1 | MTR_3g109090 | 34.799 | 273 | 149 | 10 | 4 | 266 | 73 | 326 | 2.82e-33 | 127 |
MS.gene008767.t1 | MTR_3g109090 | 34.799 | 273 | 149 | 10 | 4 | 266 | 89 | 342 | 3.15e-33 | 127 |
MS.gene008767.t1 | MTR_4g124940 | 31.461 | 267 | 165 | 8 | 4 | 266 | 75 | 327 | 9.42e-30 | 117 |
MS.gene008767.t1 | MTR_8g022050 | 30.769 | 273 | 166 | 10 | 1 | 266 | 88 | 344 | 3.52e-26 | 107 |
MS.gene008767.t1 | MTR_7g102730 | 26.415 | 265 | 147 | 8 | 1 | 258 | 36 | 259 | 7.99e-20 | 90.1 |
MS.gene008767.t1 | MTR_7g102730 | 28.467 | 274 | 157 | 10 | 1 | 264 | 124 | 368 | 2.05e-18 | 86.3 |
MS.gene008767.t1 | MTR_4g085540 | 28.114 | 281 | 165 | 10 | 1 | 272 | 148 | 400 | 1.42e-19 | 89.7 |
MS.gene008767.t1 | MTR_4g085540 | 28.421 | 190 | 99 | 5 | 74 | 258 | 35 | 192 | 2.80e-16 | 79.7 |
MS.gene008767.t1 | MTR_4g085540 | 26.641 | 259 | 144 | 8 | 1 | 253 | 60 | 278 | 4.38e-15 | 76.3 |
MS.gene008767.t1 | MTR_3g075500 | 35.625 | 160 | 91 | 5 | 4 | 158 | 138 | 290 | 5.23e-16 | 77.4 |
MS.gene008767.t1 | MTR_4g104470 | 32.692 | 156 | 96 | 4 | 4 | 156 | 151 | 300 | 1.29e-14 | 73.6 |
MS.gene008767.t1 | MTR_3g065190 | 29.936 | 157 | 99 | 3 | 1 | 157 | 51 | 196 | 2.07e-14 | 73.6 |
MS.gene008767.t1 | MTR_1g097440 | 27.574 | 272 | 148 | 11 | 1 | 265 | 56 | 285 | 2.28e-14 | 73.9 |
MS.gene008767.t1 | MTR_1g097440 | 25.660 | 265 | 165 | 10 | 1 | 258 | 144 | 383 | 3.00e-13 | 70.5 |
MS.gene008767.t1 | MTR_1g097440 | 30.864 | 162 | 100 | 6 | 1 | 154 | 235 | 392 | 4.20e-11 | 63.9 |
MS.gene008767.t1 | MTR_6g040190 | 25.000 | 256 | 144 | 6 | 1 | 251 | 51 | 263 | 4.14e-14 | 73.2 |
MS.gene008767.t1 | MTR_1g019150 | 26.354 | 277 | 155 | 9 | 12 | 272 | 156 | 399 | 6.68e-14 | 72.4 |
MS.gene008767.t1 | MTR_1g019150 | 26.744 | 258 | 145 | 9 | 1 | 253 | 58 | 276 | 1.75e-13 | 71.2 |
MS.gene008767.t1 | MTR_1g019150 | 30.864 | 162 | 99 | 5 | 2 | 154 | 237 | 394 | 2.60e-11 | 64.7 |
MS.gene008767.t1 | MTR_3g075500 | 36.691 | 139 | 76 | 5 | 4 | 137 | 138 | 269 | 9.49e-14 | 70.5 |
MS.gene008767.t1 | MTR_1g056520 | 30.519 | 154 | 101 | 3 | 1 | 151 | 134 | 284 | 9.97e-14 | 70.9 |
MS.gene008767.t1 | MTR_1g045510 | 31.788 | 151 | 95 | 4 | 5 | 155 | 143 | 285 | 2.55e-13 | 69.3 |
MS.gene008767.t1 | MTR_3g102040 | 27.059 | 255 | 142 | 8 | 1 | 250 | 50 | 265 | 4.83e-13 | 70.1 |
MS.gene008767.t1 | MTR_3g102040 | 26.415 | 265 | 154 | 11 | 1 | 254 | 138 | 372 | 1.07e-11 | 65.9 |
MS.gene008767.t1 | MTR_1g080150 | 40.789 | 76 | 44 | 1 | 72 | 147 | 131 | 205 | 5.04e-13 | 67.8 |
MS.gene008767.t1 | MTR_5g017280 | 25.915 | 328 | 185 | 12 | 6 | 293 | 35 | 344 | 7.28e-11 | 62.8 |
MS.gene008767.t1 | MTR_5g017280 | 26.444 | 329 | 182 | 12 | 6 | 293 | 35 | 344 | 9.90e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008767.t1 | AT3G19130 | 71.273 | 275 | 73 | 3 | 1 | 275 | 134 | 402 | 8.08e-141 | 405 |
MS.gene008767.t1 | AT1G49600 | 66.776 | 304 | 85 | 6 | 1 | 303 | 145 | 433 | 1.33e-134 | 389 |
MS.gene008767.t1 | AT1G47500 | 62.136 | 309 | 98 | 5 | 1 | 308 | 131 | 421 | 5.15e-128 | 372 |
MS.gene008767.t1 | AT1G49600 | 68.401 | 269 | 75 | 2 | 1 | 269 | 145 | 403 | 4.15e-127 | 370 |
MS.gene008767.t1 | AT1G49600 | 68.401 | 269 | 75 | 2 | 1 | 269 | 145 | 403 | 4.15e-127 | 370 |
MS.gene008767.t1 | AT1G47490 | 61.165 | 309 | 101 | 5 | 1 | 308 | 129 | 419 | 1.19e-126 | 369 |
MS.gene008767.t1 | AT5G19350 | 48.358 | 335 | 141 | 5 | 1 | 312 | 50 | 375 | 1.30e-101 | 305 |
MS.gene008767.t1 | AT5G54900 | 52.525 | 297 | 121 | 3 | 1 | 296 | 86 | 363 | 2.15e-101 | 303 |
MS.gene008767.t1 | AT5G19350 | 48.512 | 336 | 143 | 5 | 1 | 312 | 50 | 379 | 4.65e-101 | 303 |
MS.gene008767.t1 | AT1G11650 | 52.980 | 302 | 115 | 6 | 1 | 300 | 88 | 364 | 1.15e-100 | 301 |
MS.gene008767.t1 | AT4G27000 | 56.204 | 274 | 98 | 4 | 2 | 274 | 107 | 359 | 4.20e-99 | 298 |
MS.gene008767.t1 | AT1G11650 | 54.167 | 240 | 87 | 5 | 1 | 238 | 88 | 306 | 3.54e-83 | 253 |
MS.gene008767.t1 | AT1G47500 | 62.051 | 195 | 57 | 3 | 1 | 195 | 131 | 308 | 1.01e-75 | 235 |
MS.gene008767.t1 | AT1G47490 | 60.406 | 197 | 61 | 3 | 1 | 197 | 129 | 308 | 1.83e-75 | 234 |
MS.gene008767.t1 | AT1G54080 | 32.472 | 271 | 164 | 8 | 1 | 266 | 89 | 345 | 1.85e-34 | 130 |
MS.gene008767.t1 | AT3G14100 | 33.948 | 271 | 160 | 9 | 1 | 266 | 85 | 341 | 3.35e-33 | 127 |
MS.gene008767.t1 | AT1G54080 | 32.000 | 275 | 164 | 9 | 1 | 266 | 89 | 349 | 7.41e-33 | 126 |
MS.gene008767.t1 | AT1G17370 | 33.210 | 271 | 162 | 9 | 1 | 266 | 80 | 336 | 3.17e-32 | 124 |
MS.gene008767.t1 | AT1G17370 | 33.579 | 271 | 158 | 10 | 1 | 266 | 80 | 333 | 6.66e-32 | 123 |
MS.gene008767.t1 | AT4G34110 | 29.537 | 281 | 161 | 10 | 1 | 272 | 150 | 402 | 9.45e-20 | 90.1 |
MS.gene008767.t1 | AT4G34110 | 26.275 | 255 | 144 | 8 | 1 | 250 | 62 | 277 | 4.91e-16 | 79.0 |
MS.gene008767.t1 | AT2G23350 | 28.832 | 274 | 156 | 11 | 1 | 264 | 160 | 404 | 1.82e-19 | 89.4 |
MS.gene008767.t1 | AT2G23350 | 30.909 | 165 | 94 | 5 | 2 | 154 | 251 | 407 | 2.23e-11 | 65.1 |
MS.gene008767.t1 | AT1G71770 | 26.199 | 271 | 169 | 9 | 1 | 264 | 172 | 418 | 1.72e-17 | 83.6 |
MS.gene008767.t1 | AT1G71770 | 26.199 | 271 | 169 | 9 | 1 | 264 | 172 | 418 | 1.72e-17 | 83.6 |
MS.gene008767.t1 | AT1G34140 | 26.103 | 272 | 166 | 8 | 1 | 265 | 57 | 300 | 2.08e-17 | 82.4 |
MS.gene008767.t1 | AT1G49760 | 25.993 | 277 | 176 | 8 | 1 | 272 | 159 | 411 | 7.26e-17 | 81.6 |
MS.gene008767.t1 | AT1G49760 | 27.734 | 256 | 139 | 7 | 1 | 250 | 71 | 286 | 5.30e-14 | 72.8 |
MS.gene008767.t1 | AT1G49760 | 25.993 | 277 | 176 | 8 | 1 | 272 | 159 | 411 | 7.26e-17 | 81.6 |
MS.gene008767.t1 | AT1G49760 | 27.734 | 256 | 139 | 7 | 1 | 250 | 71 | 286 | 5.30e-14 | 72.8 |
MS.gene008767.t1 | AT4G24770 | 33.758 | 157 | 94 | 4 | 4 | 156 | 179 | 329 | 9.97e-15 | 73.9 |
MS.gene008767.t1 | AT4G24770 | 33.758 | 157 | 94 | 4 | 4 | 156 | 179 | 329 | 9.97e-15 | 73.9 |
MS.gene008767.t1 | AT5G50250 | 33.333 | 147 | 93 | 2 | 4 | 150 | 142 | 283 | 1.61e-14 | 73.2 |
MS.gene008767.t1 | AT3G16380 | 25.095 | 263 | 155 | 8 | 1 | 258 | 47 | 272 | 7.39e-14 | 72.4 |
MS.gene008767.t1 | AT3G04500 | 41.558 | 77 | 44 | 1 | 71 | 147 | 135 | 210 | 2.65e-13 | 68.9 |
MS.gene008767.t1 | AT1G60000 | 32.450 | 151 | 95 | 4 | 4 | 154 | 114 | 257 | 3.53e-13 | 68.6 |
MS.gene008767.t1 | AT3G52380 | 27.950 | 161 | 106 | 3 | 1 | 154 | 142 | 299 | 2.10e-12 | 67.4 |
MS.gene008767.t1 | AT4G13850 | 40.741 | 81 | 47 | 1 | 75 | 155 | 37 | 116 | 2.68e-12 | 63.5 |
MS.gene008767.t1 | AT1G07360 | 40.741 | 81 | 47 | 1 | 185 | 264 | 220 | 300 | 3.05e-12 | 67.4 |
MS.gene008767.t1 | AT4G13850 | 40.741 | 81 | 47 | 1 | 75 | 155 | 37 | 116 | 3.97e-12 | 63.5 |
MS.gene008767.t1 | AT4G13850 | 40.741 | 81 | 47 | 1 | 75 | 155 | 37 | 116 | 4.79e-12 | 63.5 |
MS.gene008767.t1 | AT4G13850 | 40.741 | 81 | 47 | 1 | 75 | 155 | 37 | 116 | 5.30e-12 | 63.5 |
MS.gene008767.t1 | AT2G37220 | 28.571 | 203 | 122 | 5 | 70 | 261 | 88 | 278 | 1.04e-11 | 64.7 |
MS.gene008767.t1 | AT3G13224 | 26.946 | 167 | 112 | 5 | 1 | 166 | 45 | 202 | 1.18e-11 | 65.1 |
MS.gene008767.t1 | AT4G26650 | 26.108 | 203 | 124 | 7 | 63 | 253 | 4 | 192 | 1.18e-11 | 65.5 |
MS.gene008767.t1 | AT2G36660 | 23.643 | 258 | 166 | 7 | 1 | 253 | 138 | 369 | 1.19e-11 | 65.9 |
MS.gene008767.t1 | AT3G13224 | 26.946 | 167 | 112 | 5 | 1 | 166 | 36 | 193 | 1.72e-11 | 64.7 |
MS.gene008767.t1 | AT2G18510 | 27.389 | 157 | 103 | 3 | 1 | 157 | 51 | 196 | 1.77e-11 | 64.7 |
MS.gene008767.t1 | AT2G29580 | 34.314 | 102 | 66 | 1 | 185 | 285 | 220 | 321 | 2.14e-11 | 64.7 |
MS.gene008767.t1 | AT4G26650 | 26.263 | 198 | 120 | 7 | 68 | 253 | 6 | 189 | 2.75e-11 | 64.3 |
Find 87 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATGCTGAGGAAGCAATTC+AGG | 0.256444 | 4.4:-25831883 | MS.gene008767:CDS |
CGAAACGCCTGATCGGTATT+TGG | 0.263962 | 4.4:+25833908 | None:intergenic |
ATCAGGCGTTTCGTCTGAAT+TGG | 0.276433 | 4.4:-25833898 | MS.gene008767:CDS |
ACTGGTCAATCGGAGGGATA+TGG | 0.328591 | 4.4:-25833998 | MS.gene008767:CDS |
GGATATGGTGGCCATGGATA+TGG | 0.328731 | 4.4:-25831302 | MS.gene008767:CDS |
AGCAGACAGTGCGTCTTTCT+TGG | 0.329108 | 4.4:-25831836 | MS.gene008767:CDS |
AAACTCACATGCTTATTTCC+TGG | 0.336224 | 4.4:+25831804 | None:intergenic |
GCAGACAGTGCGTCTTTCTT+GGG | 0.339350 | 4.4:-25831835 | MS.gene008767:CDS |
GGTTATGGAGGTCATGGATA+TGG | 0.355121 | 4.4:-25831317 | MS.gene008767:CDS |
CTCTGTATTTGTGGGAGACT+TGG | 0.355245 | 4.4:-25833813 | MS.gene008767:CDS |
CAACCCGCTGCTGCAGTTCA+AGG | 0.361560 | 4.4:-25831236 | MS.gene008767:CDS |
CCCTTCAGATTGGGAACCTT+GGG | 0.361796 | 4.4:+25832463 | None:intergenic |
AGGAATGACTCTAATGGTTA+TGG | 0.376637 | 4.4:-25831332 | MS.gene008767:CDS |
ATCTGATCTCTCTGTATTTG+TGG | 0.381754 | 4.4:-25833822 | MS.gene008767:CDS |
TCAGGCGTTTCGTCTGAATT+GGG | 0.404528 | 4.4:-25833897 | MS.gene008767:CDS |
TATCTGTTGCAGATATTTGT+TGG | 0.405468 | 4.4:-25832356 | MS.gene008767:intron |
CATAGCATCAGTAACATCTA+TGG | 0.413758 | 4.4:+25833790 | None:intergenic |
ATATGCTGCTAGACAAAATC+AGG | 0.422308 | 4.4:-25831270 | MS.gene008767:CDS |
CCCCTTCAGATTGGGAACCT+TGG | 0.423023 | 4.4:+25832462 | None:intergenic |
GGATTGAATGGAACAGTGAT+TGG | 0.427017 | 4.4:-25831861 | MS.gene008767:CDS |
ACCTTGGGCCACAGCACCAT+TGG | 0.430193 | 4.4:+25832478 | None:intergenic |
ACATTCAGCGCTGCCGGTGG+TGG | 0.434038 | 4.4:-25833872 | MS.gene008767:CDS |
GTCATACGTAATAAGCAAAC+TGG | 0.435726 | 4.4:-25834016 | MS.gene008767:CDS |
GTTAGAATCCCCTTCAGATT+GGG | 0.438640 | 4.4:+25832454 | None:intergenic |
CTTTCTTGGGGTCGCAGTCC+AGG | 0.447144 | 4.4:-25831822 | MS.gene008767:CDS |
GGCTTATGTGCAGGTTGTAT+CGG | 0.450307 | 4.4:-25834044 | None:intergenic |
GTGAAAATCCCAGTCGGTAA+AGG | 0.454342 | 4.4:-25832263 | MS.gene008767:CDS |
TTCAGCGCTGCCGGTGGTGG+TGG | 0.454357 | 4.4:-25833869 | MS.gene008767:CDS |
TCTAATACTGGTCGTTCAAA+AGG | 0.454872 | 4.4:-25833707 | MS.gene008767:CDS |
GTTGTTATTGACTCTAATAC+TGG | 0.457060 | 4.4:-25833719 | MS.gene008767:CDS |
TCTGATCTCTCTGTATTTGT+GGG | 0.467526 | 4.4:-25833821 | MS.gene008767:CDS |
TGTTAGAATCCCCTTCAGAT+TGG | 0.468873 | 4.4:+25832453 | None:intergenic |
GCCCCTTGAACTGCAGCAGC+GGG | 0.471724 | 4.4:+25831233 | None:intergenic |
AACCCGCTGCTGCAGTTCAA+GGG | 0.482024 | 4.4:-25831235 | MS.gene008767:CDS |
GAAGCAATTCAGGGATTGAA+TGG | 0.482531 | 4.4:-25831873 | MS.gene008767:CDS |
ACGCCTCTCGCCACCACCAC+CGG | 0.482553 | 4.4:+25833859 | None:intergenic |
ATGGCGTTTATTGTTCTAGC+AGG | 0.496066 | 4.4:-25833625 | MS.gene008767:CDS |
TAATAAGCAAACTGGTCAAT+CGG | 0.501480 | 4.4:-25834008 | MS.gene008767:CDS |
AAAGTCTTGCAGAACTTCAA+TGG | 0.502491 | 4.4:-25833941 | MS.gene008767:CDS |
GTAGTGTTGGCTGGTGGCGG+TGG | 0.503654 | 4.4:-25832506 | MS.gene008767:CDS |
TCTTAAACTAGCTGTAGTGT+TGG | 0.504172 | 4.4:-25832519 | MS.gene008767:intron |
AAACTAGCTGTAGTGTTGGC+TGG | 0.505517 | 4.4:-25832515 | MS.gene008767:intron |
TCTAATGGTTATGGAGGTCA+TGG | 0.506688 | 4.4:-25831323 | MS.gene008767:CDS |
TGGGCTACATTCAGCGCTGC+CGG | 0.511139 | 4.4:-25833878 | MS.gene008767:CDS |
TCCAATGGTGCTGTGGCCCA+AGG | 0.516661 | 4.4:-25832479 | MS.gene008767:CDS |
AAACCACATCCTTTACCGAC+TGG | 0.519643 | 4.4:+25832254 | None:intergenic |
TATGATGCCAAATACCGATC+AGG | 0.523250 | 4.4:-25833915 | MS.gene008767:CDS |
CTGCCGGTGGTGGTGGCGAG+AGG | 0.523668 | 4.4:-25833862 | MS.gene008767:CDS |
AGCCCCTTGAACTGCAGCAG+CGG | 0.525089 | 4.4:+25831232 | None:intergenic |
ACTGGTCGTTCAAAAGGCTA+TGG | 0.525221 | 4.4:-25833701 | MS.gene008767:CDS |
AACCACATCCTTTACCGACT+GGG | 0.528514 | 4.4:+25832255 | None:intergenic |
TTGCTTATTACGTATGACCT+TGG | 0.529532 | 4.4:+25834021 | None:intergenic |
CTGTTGCAGATATTTGTTGG+AGG | 0.534128 | 4.4:-25832353 | MS.gene008767:intron |
ACCCGCTGCTGCAGTTCAAG+GGG | 0.535252 | 4.4:-25831234 | MS.gene008767:CDS |
GGTCATGGATATGGTGGCCA+TGG | 0.539115 | 4.4:-25831308 | MS.gene008767:CDS |
ATCCATTACTTCCATATCCA+TGG | 0.539208 | 4.4:+25831291 | None:intergenic |
CAGTGGAGGAATGACTCTAA+TGG | 0.541519 | 4.4:-25831338 | MS.gene008767:CDS |
ATCCCAGTCGGTAAAGGATG+TGG | 0.548381 | 4.4:-25832257 | MS.gene008767:CDS |
CCTTGCGAAGAATATTGTTG+TGG | 0.552246 | 4.4:+25833557 | None:intergenic |
GGCCATGGATATGGAAGTAA+TGG | 0.553720 | 4.4:-25831293 | MS.gene008767:CDS |
GCTGTAGTGTTGGCTGGTGG+CGG | 0.557579 | 4.4:-25832509 | MS.gene008767:CDS |
GCCCAAGGTTCCCAATCTGA+AGG | 0.557760 | 4.4:-25832464 | MS.gene008767:CDS |
CCACAACAATATTCTTCGCA+AGG | 0.559021 | 4.4:-25833557 | MS.gene008767:intron |
AATGCTGAGGAAGCAATTCA+GGG | 0.562076 | 4.4:-25831882 | MS.gene008767:CDS |
ATTCAGACGAAACGCCTGAT+CGG | 0.563201 | 4.4:+25833901 | None:intergenic |
CAGTTCAAGGGGCTTCCTAA+CGG | 0.574226 | 4.4:-25831223 | None:intergenic |
TGGCGAGAGGCGTTCTTCTG+AGG | 0.575371 | 4.4:-25833849 | MS.gene008767:CDS |
GGTGGCGGTGGACACTCCAA+TGG | 0.577143 | 4.4:-25832494 | MS.gene008767:CDS |
CGAGTTCTATACGCGAGCAA+TGG | 0.581423 | 4.4:-25833969 | MS.gene008767:CDS |
AGAGCAATGACTGAAATGAA+TGG | 0.587516 | 4.4:-25833644 | MS.gene008767:CDS |
CCCAAGGTTCCCAATCTGAA+GGG | 0.591408 | 4.4:-25832463 | MS.gene008767:CDS |
AAGCAAACTGGTCAATCGGA+GGG | 0.598971 | 4.4:-25834004 | MS.gene008767:CDS |
CAGACAGTGCGTCTTTCTTG+GGG | 0.601300 | 4.4:-25831834 | MS.gene008767:CDS |
TGGACACTCCAATGGTGCTG+TGG | 0.602089 | 4.4:-25832486 | MS.gene008767:CDS |
TGTGCAGGTTGTATCGGCCA+AGG | 0.610498 | 4.4:-25834038 | None:intergenic |
GGTTTGGTGATGAAAGTGAA+AGG | 0.613030 | 4.4:-25833670 | MS.gene008767:CDS |
TAAGCAAACTGGTCAATCGG+AGG | 0.614770 | 4.4:-25834005 | MS.gene008767:CDS |
ATCTCTGTGAAAATCCCAGT+CGG | 0.624783 | 4.4:-25832269 | MS.gene008767:CDS |
AATGACTCTAATGGTTATGG+AGG | 0.625005 | 4.4:-25831329 | MS.gene008767:CDS |
GCTACATTCAGCGCTGCCGG+TGG | 0.628050 | 4.4:-25833875 | MS.gene008767:CDS |
TCTAGCAGGCCTATGCGAGT+AGG | 0.628642 | 4.4:-25833611 | MS.gene008767:CDS |
TGACTCTGACATTAGTGATG+AGG | 0.629614 | 4.4:-25832327 | MS.gene008767:CDS |
TATGGAGGTCATGGATATGG+TGG | 0.629902 | 4.4:-25831314 | MS.gene008767:CDS |
CCAAGGTTCCCAATCTGAAG+GGG | 0.630101 | 4.4:-25832462 | MS.gene008767:CDS |
GTTGCAACACCTACTCGCAT+AGG | 0.642755 | 4.4:+25833602 | None:intergenic |
ATGTTACAGAAAGAATGCTG+AGG | 0.670854 | 4.4:-25831895 | MS.gene008767:intron |
CTAGCTGTAGTGTTGGCTGG+TGG | 0.692590 | 4.4:-25832512 | MS.gene008767:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATATTTAATAAACATCTA+TGG | + | chr4.4:25832169-25832188 | None:intergenic | 10.0% |
!!! | GGAAATTTTATAAAATAATT+TGG | + | chr4.4:25833695-25833714 | None:intergenic | 10.0% |
!!! | AAATTTTCATTATAACTGAA+AGG | - | chr4.4:25831782-25831801 | MS.gene008767:intron | 15.0% |
!! | AAAAATAAGACGATACATAT+TGG | + | chr4.4:25833298-25833317 | None:intergenic | 20.0% |
!! | AACATTCAATAAATAGATTG+AGG | + | chr4.4:25832505-25832524 | None:intergenic | 20.0% |
!! | ACAAAGAATTAAATTAGAGA+TGG | + | chr4.4:25833892-25833911 | None:intergenic | 20.0% |
!! | ATGATATAAGATTACTTGAT+TGG | + | chr4.4:25833860-25833879 | None:intergenic | 20.0% |
!! | GTAAATATCATATTTGTTTC+TGG | - | chr4.4:25832041-25832060 | MS.gene008767:intron | 20.0% |
!!! | AAAAGTGAGAATTCATTTTA+GGG | + | chr4.4:25833823-25833842 | None:intergenic | 20.0% |
!!! | AGCAAATTTTCATCTATTAA+GGG | - | chr4.4:25831508-25831527 | MS.gene008767:intron | 20.0% |
!!! | GGCAGAAAAATTAATTTTTA+TGG | - | chr4.4:25832593-25832612 | MS.gene008767:intron | 20.0% |
!!! | TAAAAATTAATTTTTCTGCC+TGG | + | chr4.4:25832593-25832612 | None:intergenic | 20.0% |
!!! | TAAAAGTGAGAATTCATTTT+AGG | + | chr4.4:25833824-25833843 | None:intergenic | 20.0% |
!!! | TAGCAAATTTTCATCTATTA+AGG | - | chr4.4:25831507-25831526 | MS.gene008767:intron | 20.0% |
!!! | TTGTTGTTATATTTTCACTT+TGG | - | chr4.4:25833498-25833517 | MS.gene008767:intron | 20.0% |
! | ATATTAATATCAATCCAACC+AGG | + | chr4.4:25831828-25831847 | None:intergenic | 25.0% |
! | GACTTCATAATCAAAATCTA+AGG | + | chr4.4:25833801-25833820 | None:intergenic | 25.0% |
! | TATGCATGAATATTTGTTTC+TGG | - | chr4.4:25832138-25832157 | MS.gene008767:intron | 25.0% |
! | TATTAATATCAATCCAACCA+GGG | + | chr4.4:25831827-25831846 | None:intergenic | 25.0% |
! | TTAAATCTCATATTTGTTCC+TGG | - | chr4.4:25832308-25832327 | MS.gene008767:CDS | 25.0% |
!! | TTCTTTTGATATCTCAGTAA+CGG | - | chr4.4:25832877-25832896 | MS.gene008767:intron | 25.0% |
!! | TTTTCATTATAACTGAAAGG+AGG | - | chr4.4:25831785-25831804 | MS.gene008767:intron | 25.0% |
!!! | GTGCATATCTATTTTTATGT+TGG | - | chr4.4:25831877-25831896 | MS.gene008767:CDS | 25.0% |
AACAGTATACATCATGAGAT+AGG | + | chr4.4:25832450-25832469 | None:intergenic | 30.0% | |
AACCAGGGAATTGAATTATT+AGG | + | chr4.4:25831812-25831831 | None:intergenic | 30.0% | |
AAGTATTCCTCAAATGGATA+GGG | - | chr4.4:25833151-25833170 | MS.gene008767:intron | 30.0% | |
ACATCACCAAATTGCAAAAA+TGG | + | chr4.4:25832967-25832986 | None:intergenic | 30.0% | |
ACGATCTATATCTATGCTAA+GGG | + | chr4.4:25833062-25833081 | None:intergenic | 30.0% | |
AGCACACTTACAAATAAAAC+AGG | + | chr4.4:25831947-25831966 | None:intergenic | 30.0% | |
GTATGATGAATAAATCGAAG+TGG | - | chr4.4:25831921-25831940 | MS.gene008767:intron | 30.0% | |
GTTATGCATGAATTCAAACA+TGG | - | chr4.4:25832112-25832131 | MS.gene008767:intron | 30.0% | |
TAAGTATTCCTCAAATGGAT+AGG | - | chr4.4:25833150-25833169 | MS.gene008767:intron | 30.0% | |
TAATAAGCAAACTGGTCAAT+CGG | - | chr4.4:25831249-25831268 | MS.gene008767:CDS | 30.0% | |
TAATAATTCAATTCCCTGGT+TGG | - | chr4.4:25831811-25831830 | MS.gene008767:intron | 30.0% | |
TACGATCTATATCTATGCTA+AGG | + | chr4.4:25833063-25833082 | None:intergenic | 30.0% | |
TATCTGTTGCAGATATTTGT+TGG | - | chr4.4:25832901-25832920 | MS.gene008767:intron | 30.0% | |
TGCAAGGAAATATAACAAAG+TGG | + | chr4.4:25832406-25832425 | None:intergenic | 30.0% | |
TTAGTACACAAACTTAGAAC+AGG | + | chr4.4:25833570-25833589 | None:intergenic | 30.0% | |
TTTAGTAGTGTAAGCAATAC+AGG | - | chr4.4:25833609-25833628 | MS.gene008767:CDS | 30.0% | |
! | TGACTTTTCAATACAAGTCT+TGG | - | chr4.4:25831989-25832008 | MS.gene008767:intron | 30.0% |
!! | AGACAACCATTTTTGCAATT+TGG | - | chr4.4:25832958-25832977 | MS.gene008767:intron | 30.0% |
!! | GTTGTTATTGACTCTAATAC+TGG | - | chr4.4:25831538-25831557 | MS.gene008767:intron | 30.0% |
!!! | GGATTGCCATAAGTTTTTTT+GGG | + | chr4.4:25831682-25831701 | None:intergenic | 30.0% |
!!! | GTATCGTCTTATTTTTGACT+GGG | - | chr4.4:25833302-25833321 | MS.gene008767:intron | 30.0% |
!!! | TGGATTGCCATAAGTTTTTT+TGG | + | chr4.4:25831683-25831702 | None:intergenic | 30.0% |
!!! | TGTATCGTCTTATTTTTGAC+TGG | - | chr4.4:25833301-25833320 | MS.gene008767:intron | 30.0% |
AAACTCACATGCTTATTTCC+TGG | + | chr4.4:25833456-25833475 | None:intergenic | 35.0% | |
AAAGTCTTGCAGAACTTCAA+TGG | - | chr4.4:25831316-25831335 | MS.gene008767:CDS | 35.0% | |
AATGACTCTAATGGTTATGG+AGG | - | chr4.4:25833928-25833947 | MS.gene008767:CDS | 35.0% | |
AGAATCTTGAATGCATAACC+AGG | - | chr4.4:25832572-25832591 | MS.gene008767:intron | 35.0% | |
AGAGCAATGACTGAAATGAA+TGG | - | chr4.4:25831613-25831632 | MS.gene008767:intron | 35.0% | |
AGCGCACTTACAAATAAAAC+AGG | + | chr4.4:25832217-25832236 | None:intergenic | 35.0% | |
AGGAATGACTCTAATGGTTA+TGG | - | chr4.4:25833925-25833944 | MS.gene008767:CDS | 35.0% | |
ATACATCATGAGATAGGCAA+GGG | + | chr4.4:25832444-25832463 | None:intergenic | 35.0% | |
ATATGCTGCTAGACAAAATC+AGG | - | chr4.4:25833987-25834006 | MS.gene008767:CDS | 35.0% | |
ATCCATTACTTCCATATCCA+TGG | + | chr4.4:25833969-25833988 | None:intergenic | 35.0% | |
ATCTGATCTCTCTGTATTTG+TGG | - | chr4.4:25831435-25831454 | MS.gene008767:intron | 35.0% | |
ATGAAGAGTTGGCATAATCA+AGG | + | chr4.4:25833180-25833199 | None:intergenic | 35.0% | |
ATGTTACAGAAAGAATGCTG+AGG | - | chr4.4:25833362-25833381 | MS.gene008767:intron | 35.0% | |
CATAGCATCAGTAACATCTA+TGG | + | chr4.4:25831470-25831489 | None:intergenic | 35.0% | |
GCAACACCCAAAAAAACTTA+TGG | - | chr4.4:25831673-25831692 | MS.gene008767:intron | 35.0% | |
GTCATACGTAATAAGCAAAC+TGG | - | chr4.4:25831241-25831260 | MS.gene008767:CDS | 35.0% | |
GTCCTAATAATTCAATTCCC+TGG | - | chr4.4:25831807-25831826 | MS.gene008767:intron | 35.0% | |
TATACATCATGAGATAGGCA+AGG | + | chr4.4:25832445-25832464 | None:intergenic | 35.0% | |
TCTAATACTGGTCGTTCAAA+AGG | - | chr4.4:25831550-25831569 | MS.gene008767:intron | 35.0% | |
TCTGATCTCTCTGTATTTGT+GGG | - | chr4.4:25831436-25831455 | MS.gene008767:intron | 35.0% | |
TCTGTAACATAAAGAGCAGA+AGG | + | chr4.4:25833352-25833371 | None:intergenic | 35.0% | |
TCTTAAACTAGCTGTAGTGT+TGG | - | chr4.4:25832738-25832757 | MS.gene008767:intron | 35.0% | |
TGGCATAAGTATTCCTCAAA+TGG | - | chr4.4:25833145-25833164 | MS.gene008767:intron | 35.0% | |
TTGCTTATTACGTATGACCT+TGG | + | chr4.4:25831239-25831258 | None:intergenic | 35.0% | |
TTTCACTTTGGCCATCTAAT+GGG | - | chr4.4:25833510-25833529 | MS.gene008767:intron | 35.0% | |
! | ATGCTGAAGGTATATGAATG+CGG | + | chr4.4:25833716-25833735 | None:intergenic | 35.0% |
! | CTCGTAATTTTCCCATTAGA+TGG | + | chr4.4:25833524-25833543 | None:intergenic | 35.0% |
! | TTTTCACTTTGGCCATCTAA+TGG | - | chr4.4:25833509-25833528 | MS.gene008767:intron | 35.0% |
!! | TTCCTGGCTTTATGCATTAA+TGG | - | chr4.4:25832324-25832343 | MS.gene008767:CDS | 35.0% |
!!! | CAAAAGGCTATGGTTTTGTT+AGG | - | chr4.4:25831566-25831585 | MS.gene008767:intron | 35.0% |
AAGGATTCCCTATCCATTTG+AGG | + | chr4.4:25833161-25833180 | None:intergenic | 40.0% | |
AATGCTGAGGAAGCAATTCA+GGG | - | chr4.4:25833375-25833394 | MS.gene008767:intron | 40.0% | |
AATTCTTTGTGATGTCGCAG+TGG | - | chr4.4:25833902-25833921 | MS.gene008767:CDS | 40.0% | |
AGCAACTAGTTACATGCTGA+AGG | + | chr4.4:25833729-25833748 | None:intergenic | 40.0% | |
ATCTCTGTGAAAATCCCAGT+CGG | - | chr4.4:25832988-25833007 | MS.gene008767:intron | 40.0% | |
ATGGCGTTTATTGTTCTAGC+AGG | - | chr4.4:25831632-25831651 | MS.gene008767:intron | 40.0% | |
CCACAACAATATTCTTCGCA+AGG | - | chr4.4:25831700-25831719 | MS.gene008767:intron | 40.0% | |
CCTTGCGAAGAATATTGTTG+TGG | + | chr4.4:25831703-25831722 | None:intergenic | 40.0% | |
GAAGCAATTCAGGGATTGAA+TGG | - | chr4.4:25833384-25833403 | MS.gene008767:intron | 40.0% | |
GAATAGATTCAAGTGGTGCA+AGG | + | chr4.4:25832422-25832441 | None:intergenic | 40.0% | |
GGATTGAATGGAACAGTGAT+TGG | - | chr4.4:25833396-25833415 | MS.gene008767:intron | 40.0% | |
GTCCATTAATGCATAAAGCC+AGG | + | chr4.4:25832329-25832348 | None:intergenic | 40.0% | |
GTTAGAATCCCCTTCAGATT+GGG | + | chr4.4:25832806-25832825 | None:intergenic | 40.0% | |
GTTTCTTGCGAAATGAACAG+TGG | - | chr4.4:25833125-25833144 | MS.gene008767:intron | 40.0% | |
TAACACGAGAGAGTTATCAC+TGG | - | chr4.4:25832656-25832675 | MS.gene008767:intron | 40.0% | |
TATGATGCCAAATACCGATC+AGG | - | chr4.4:25831342-25831361 | MS.gene008767:intron | 40.0% | |
TCATCCTGTGGAATCATGTA+AGG | - | chr4.4:25833196-25833215 | MS.gene008767:intron | 40.0% | |
TCATCCTTACATGATTCCAC+AGG | + | chr4.4:25833203-25833222 | None:intergenic | 40.0% | |
TCTAATGGTTATGGAGGTCA+TGG | - | chr4.4:25833934-25833953 | MS.gene008767:CDS | 40.0% | |
TGACTCTGACATTAGTGATG+AGG | - | chr4.4:25832930-25832949 | MS.gene008767:intron | 40.0% | |
TGTGGAATCATGTAAGGATG+AGG | - | chr4.4:25833202-25833221 | MS.gene008767:intron | 40.0% | |
TGTTAGAATCCCCTTCAGAT+TGG | + | chr4.4:25832807-25832826 | None:intergenic | 40.0% | |
! | CTGTTGCAGATATTTGTTGG+AGG | - | chr4.4:25832904-25832923 | MS.gene008767:intron | 40.0% |
! | TGAAGTATCTGCAGCAGAAA+AGG | + | chr4.4:25831763-25831782 | None:intergenic | 40.0% |
!! | AAGGTTGGTGCTGATTTAAG+TGG | + | chr4.4:25831744-25831763 | None:intergenic | 40.0% |
!! | GGTTTGGTGATGAAAGTGAA+AGG | - | chr4.4:25831587-25831606 | MS.gene008767:intron | 40.0% |
!!! | GGCTATGGTTTTGTTAGGTT+TGG | - | chr4.4:25831571-25831590 | MS.gene008767:intron | 40.0% |
!!! | GTTTTGTTCAACTTGCTGAC+AGG | - | chr4.4:25833022-25833041 | MS.gene008767:intron | 40.0% |
!!! | TCGTCTTATTTTTGACTGGG+TGG | - | chr4.4:25833305-25833324 | MS.gene008767:intron | 40.0% |
AAACCACATCCTTTACCGAC+TGG | + | chr4.4:25833006-25833025 | None:intergenic | 45.0% | |
AAGCAAACTGGTCAATCGGA+GGG | - | chr4.4:25831253-25831272 | MS.gene008767:CDS | 45.0% | |
ACACAACTGTGAGTCTGCTT+TGG | - | chr4.4:25832827-25832846 | MS.gene008767:intron | 45.0% | |
ACTGGTCGTTCAAAAGGCTA+TGG | - | chr4.4:25831556-25831575 | MS.gene008767:intron | 45.0% | |
ATCAGGCGTTTCGTCTGAAT+TGG | - | chr4.4:25831359-25831378 | MS.gene008767:intron | 45.0% | |
ATTCAGACGAAACGCCTGAT+CGG | + | chr4.4:25831359-25831378 | None:intergenic | 45.0% | |
CAGTGGAGGAATGACTCTAA+TGG | - | chr4.4:25833919-25833938 | MS.gene008767:CDS | 45.0% | |
CTCTGTATTTGTGGGAGACT+TGG | - | chr4.4:25831444-25831463 | MS.gene008767:intron | 45.0% | |
GAATGCTGAGGAAGCAATTC+AGG | - | chr4.4:25833374-25833393 | MS.gene008767:intron | 45.0% | |
GATTCCACAGGATGAAGAGT+TGG | + | chr4.4:25833191-25833210 | None:intergenic | 45.0% | |
GGCAAGGGAATAGATTCAAG+TGG | + | chr4.4:25832429-25832448 | None:intergenic | 45.0% | |
GGCCATGGATATGGAAGTAA+TGG | - | chr4.4:25833964-25833983 | MS.gene008767:CDS | 45.0% | |
GGTTATGGAGGTCATGGATA+TGG | - | chr4.4:25833940-25833959 | MS.gene008767:CDS | 45.0% | |
GTATCTGCAGCAGAAAAGGT+TGG | + | chr4.4:25831759-25831778 | None:intergenic | 45.0% | |
GTCTCGTTCTCTCTGTAATC+AGG | - | chr4.4:25833543-25833562 | MS.gene008767:intron | 45.0% | |
GTGAAAATCCCAGTCGGTAA+AGG | - | chr4.4:25832994-25833013 | MS.gene008767:intron | 45.0% | |
TAAGCAAACTGGTCAATCGG+AGG | - | chr4.4:25831252-25831271 | MS.gene008767:CDS | 45.0% | |
TATGCCAACTCTTCATCCTG+TGG | - | chr4.4:25833184-25833203 | MS.gene008767:intron | 45.0% | |
TATGGAGGTCATGGATATGG+TGG | - | chr4.4:25833943-25833962 | MS.gene008767:CDS | 45.0% | |
TCAGGCGTTTCGTCTGAATT+GGG | - | chr4.4:25831360-25831379 | MS.gene008767:intron | 45.0% | |
! | AACCACATCCTTTACCGACT+GGG | + | chr4.4:25833005-25833024 | None:intergenic | 45.0% |
!! | AAACTAGCTGTAGTGTTGGC+TGG | - | chr4.4:25832742-25832761 | MS.gene008767:intron | 45.0% |
ACTGGTCAATCGGAGGGATA+TGG | - | chr4.4:25831259-25831278 | MS.gene008767:CDS | 50.0% | |
AGCAGACAGTGCGTCTTTCT+TGG | - | chr4.4:25833421-25833440 | MS.gene008767:intron | 50.0% | |
ATCCCAGTCGGTAAAGGATG+TGG | - | chr4.4:25833000-25833019 | MS.gene008767:intron | 50.0% | |
CAGACAGTGCGTCTTTCTTG+GGG | - | chr4.4:25833423-25833442 | MS.gene008767:intron | 50.0% | |
CCAAGGTTCCCAATCTGAAG+GGG | - | chr4.4:25832795-25832814 | MS.gene008767:intron | 50.0% | |
CCCAAGGTTCCCAATCTGAA+GGG | - | chr4.4:25832794-25832813 | MS.gene008767:intron | 50.0% | |
CCCTTCAGATTGGGAACCTT+GGG | + | chr4.4:25832797-25832816 | None:intergenic | 50.0% | |
CGAAACGCCTGATCGGTATT+TGG | + | chr4.4:25831352-25831371 | None:intergenic | 50.0% | |
CGAGTTCTATACGCGAGCAA+TGG | - | chr4.4:25831288-25831307 | MS.gene008767:CDS | 50.0% | |
CTTGCTGACAGGTACACTTG+TGG | - | chr4.4:25833033-25833052 | MS.gene008767:intron | 50.0% | |
GCAGACAGTGCGTCTTTCTT+GGG | - | chr4.4:25833422-25833441 | MS.gene008767:intron | 50.0% | |
GGATATGGTGGCCATGGATA+TGG | - | chr4.4:25833955-25833974 | MS.gene008767:CDS | 50.0% | |
GTTGCAACACCTACTCGCAT+AGG | + | chr4.4:25831658-25831677 | None:intergenic | 50.0% | |
TCTTTGTGATGTCGCAGTGG+AGG | - | chr4.4:25833905-25833924 | MS.gene008767:CDS | 50.0% | |
AACCCGCTGCTGCAGTTCAA+GGG | - | chr4.4:25834022-25834041 | MS.gene008767:CDS | 55.0% | |
CCCCTTCAGATTGGGAACCT+TGG | + | chr4.4:25832798-25832817 | None:intergenic | 55.0% | |
GCCCAAGGTTCCCAATCTGA+AGG | - | chr4.4:25832793-25832812 | MS.gene008767:intron | 55.0% | |
GGTCATGGATATGGTGGCCA+TGG | - | chr4.4:25833949-25833968 | MS.gene008767:CDS | 55.0% | |
TCTAGCAGGCCTATGCGAGT+AGG | - | chr4.4:25831646-25831665 | MS.gene008767:intron | 55.0% | |
! | TGGACACTCCAATGGTGCTG+TGG | - | chr4.4:25832771-25832790 | MS.gene008767:intron | 55.0% |
!! | CTAGCTGTAGTGTTGGCTGG+TGG | - | chr4.4:25832745-25832764 | MS.gene008767:intron | 55.0% |
AAACCGCCCACTGTGCTGTG+GGG | + | chr4.4:25833109-25833128 | None:intergenic | 60.0% | |
ACCCGCTGCTGCAGTTCAAG+GGG | - | chr4.4:25834023-25834042 | MS.gene008767:CDS | 60.0% | |
ACCTTGGGCCACAGCACCAT+TGG | + | chr4.4:25832782-25832801 | None:intergenic | 60.0% | |
AGAAACCGCCCACTGTGCTG+TGG | + | chr4.4:25833111-25833130 | None:intergenic | 60.0% | |
AGCCCCTTGAACTGCAGCAG+CGG | + | chr4.4:25834028-25834047 | None:intergenic | 60.0% | |
CAACCCGCTGCTGCAGTTCA+AGG | - | chr4.4:25834021-25834040 | MS.gene008767:CDS | 60.0% | |
CTTTCTTGGGGTCGCAGTCC+AGG | - | chr4.4:25833435-25833454 | MS.gene008767:intron | 60.0% | |
GAAACCGCCCACTGTGCTGT+GGG | + | chr4.4:25833110-25833129 | None:intergenic | 60.0% | |
TGCAACCCCCACAGCACAGT+GGG | - | chr4.4:25833100-25833119 | MS.gene008767:intron | 60.0% | |
TGGGCTACATTCAGCGCTGC+CGG | - | chr4.4:25831379-25831398 | MS.gene008767:intron | 60.0% | |
TTGCAACCCCCACAGCACAG+TGG | - | chr4.4:25833099-25833118 | MS.gene008767:intron | 60.0% | |
!! | GCTGTAGTGTTGGCTGGTGG+CGG | - | chr4.4:25832748-25832767 | MS.gene008767:intron | 60.0% |
!! | TCCAATGGTGCTGTGGCCCA+AGG | - | chr4.4:25832778-25832797 | MS.gene008767:intron | 60.0% |
!! | TGGCGAGAGGCGTTCTTCTG+AGG | - | chr4.4:25831408-25831427 | MS.gene008767:intron | 60.0% |
AACCCCCACAGCACAGTGGG+CGG | - | chr4.4:25833103-25833122 | MS.gene008767:intron | 65.0% | |
AACCGCCCACTGTGCTGTGG+GGG | + | chr4.4:25833108-25833127 | None:intergenic | 65.0% | |
ACATTCAGCGCTGCCGGTGG+TGG | - | chr4.4:25831385-25831404 | MS.gene008767:intron | 65.0% | |
GCCCCTTGAACTGCAGCAGC+GGG | + | chr4.4:25834027-25834046 | None:intergenic | 65.0% | |
GCTACATTCAGCGCTGCCGG+TGG | - | chr4.4:25831382-25831401 | MS.gene008767:intron | 65.0% | |
! | GGTGGCGGTGGACACTCCAA+TGG | - | chr4.4:25832763-25832782 | MS.gene008767:intron | 65.0% |
!! | GTAGTGTTGGCTGGTGGCGG+TGG | - | chr4.4:25832751-25832770 | MS.gene008767:intron | 65.0% |
ACGCCTCTCGCCACCACCAC+CGG | + | chr4.4:25831401-25831420 | None:intergenic | 70.0% | |
! | TTCAGCGCTGCCGGTGGTGG+TGG | - | chr4.4:25831388-25831407 | MS.gene008767:intron | 70.0% |
!! | CTGCCGGTGGTGGTGGCGAG+AGG | - | chr4.4:25831395-25831414 | MS.gene008767:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 25831226 | 25834053 | 25831226 | ID=MS.gene008767 |
chr4.4 | mRNA | 25831226 | 25834053 | 25831226 | ID=MS.gene008767.t1;Parent=MS.gene008767 |
chr4.4 | exon | 25833558 | 25834053 | 25833558 | ID=MS.gene008767.t1.exon1;Parent=MS.gene008767.t1 |
chr4.4 | CDS | 25833558 | 25834053 | 25833558 | ID=cds.MS.gene008767.t1;Parent=MS.gene008767.t1 |
chr4.4 | exon | 25832445 | 25832530 | 25832445 | ID=MS.gene008767.t1.exon2;Parent=MS.gene008767.t1 |
chr4.4 | CDS | 25832445 | 25832530 | 25832445 | ID=cds.MS.gene008767.t1;Parent=MS.gene008767.t1 |
chr4.4 | exon | 25832236 | 25832366 | 25832236 | ID=MS.gene008767.t1.exon3;Parent=MS.gene008767.t1 |
chr4.4 | CDS | 25832236 | 25832366 | 25832236 | ID=cds.MS.gene008767.t1;Parent=MS.gene008767.t1 |
chr4.4 | exon | 25831812 | 25831908 | 25831812 | ID=MS.gene008767.t1.exon4;Parent=MS.gene008767.t1 |
chr4.4 | CDS | 25831812 | 25831908 | 25831812 | ID=cds.MS.gene008767.t1;Parent=MS.gene008767.t1 |
chr4.4 | exon | 25831226 | 25831357 | 25831226 | ID=MS.gene008767.t1.exon5;Parent=MS.gene008767.t1 |
chr4.4 | CDS | 25831226 | 25831357 | 25831226 | ID=cds.MS.gene008767.t1;Parent=MS.gene008767.t1 |
Gene Sequence |
Protein sequence |