Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35613.t1 | XP_013460860.1 | 94.3 | 458 | 24 | 1 | 1 | 456 | 1 | 458 | 5.30E-239 | 836.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35613.t1 | Q9Y7K5 | 30.0 | 390 | 248 | 9 | 58 | 445 | 50 | 416 | 3.8e-36 | 154.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35613.t1 | A0A072UYQ2 | 94.3 | 458 | 24 | 1 | 1 | 456 | 1 | 458 | 3.9e-239 | 836.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35613 | MS.gene027072 | PPI |
| MS.gene51650 | MS.gene35613 | PPI |
| MS.gene81658 | MS.gene35613 | PPI |
| MS.gene35613 | MS.gene050457 | PPI |
| MS.gene35613 | MS.gene21734 | PPI |
| MS.gene35613 | MS.gene30177 | PPI |
| MS.gene35613 | MS.gene82740 | PPI |
| MS.gene35613 | MS.gene81663 | PPI |
| MS.gene35613 | MS.gene009485 | PPI |
| MS.gene35613 | MS.gene027073 | PPI |
| MS.gene35613 | MS.gene29768 | PPI |
| MS.gene35613 | MS.gene63539 | PPI |
| MS.gene35613 | MS.gene027075 | PPI |
| MS.gene35613 | MS.gene30174 | PPI |
| MS.gene35613 | MS.gene050456 | PPI |
| MS.gene35613 | MS.gene058128 | PPI |
| MS.gene35613 | MS.gene81660 | PPI |
| MS.gene35613 | MS.gene92674 | PPI |
| MS.gene77885 | MS.gene35613 | PPI |
| MS.gene90626 | MS.gene35613 | PPI |
| MS.gene35613 | MS.gene98540 | PPI |
| MS.gene35613 | MS.gene30176 | PPI |
| MS.gene35613 | MS.gene56285 | PPI |
| MS.gene35613 | MS.gene024753 | PPI |
| MS.gene35613 | MS.gene027074 | PPI |
| MS.gene35613 | MS.gene21888 | PPI |
| MS.gene30172 | MS.gene35613 | PPI |
| MS.gene35613 | MS.gene91851 | PPI |
| MS.gene35613 | MS.gene46611 | PPI |
| MS.gene027071 | MS.gene35613 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35613.t1 | MTR_3g074070 | 94.541 | 458 | 23 | 1 | 1 | 456 | 1 | 458 | 0.0 | 892 |
| MS.gene35613.t1 | MTR_3g074070 | 89.918 | 486 | 18 | 3 | 1 | 456 | 1 | 485 | 0.0 | 890 |
| MS.gene35613.t1 | MTR_3g074070 | 94.323 | 458 | 23 | 2 | 1 | 456 | 1 | 457 | 0.0 | 886 |
| MS.gene35613.t1 | MTR_3g074070 | 96.530 | 317 | 10 | 1 | 140 | 456 | 28 | 343 | 0.0 | 638 |
| MS.gene35613.t1 | MTR_3g074070 | 96.990 | 299 | 8 | 1 | 158 | 456 | 1 | 298 | 0.0 | 603 |
| MS.gene35613.t1 | MTR_2g028050 | 58.543 | 398 | 163 | 2 | 59 | 455 | 51 | 447 | 1.14e-177 | 504 |
| MS.gene35613.t1 | MTR_3g010010 | 54.897 | 439 | 192 | 5 | 19 | 456 | 14 | 447 | 1.17e-177 | 504 |
| MS.gene35613.t1 | MTR_3g010010 | 54.897 | 439 | 192 | 5 | 19 | 456 | 56 | 489 | 1.06e-176 | 504 |
| MS.gene35613.t1 | MTR_7g022190 | 54.863 | 401 | 181 | 0 | 53 | 453 | 37 | 437 | 2.61e-168 | 481 |
| MS.gene35613.t1 | MTR_3g010110 | 47.619 | 252 | 109 | 4 | 63 | 313 | 54 | 283 | 7.98e-78 | 244 |
| MS.gene35613.t1 | MTR_3g106080 | 22.000 | 300 | 188 | 4 | 182 | 436 | 312 | 610 | 1.90e-13 | 72.8 |
| MS.gene35613.t1 | MTR_4g088640 | 25.773 | 194 | 134 | 3 | 254 | 442 | 70 | 258 | 7.84e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35613.t1 | AT1G78070 | 69.604 | 454 | 129 | 3 | 1 | 453 | 1 | 446 | 0.0 | 645 |
| MS.gene35613.t1 | AT1G36070 | 71.951 | 410 | 110 | 4 | 48 | 453 | 7 | 415 | 0.0 | 615 |
| MS.gene35613.t1 | AT1G36070 | 71.951 | 410 | 109 | 5 | 48 | 453 | 7 | 414 | 0.0 | 611 |
| MS.gene35613.t1 | AT1G36070 | 71.859 | 398 | 107 | 4 | 60 | 453 | 1 | 397 | 0.0 | 598 |
| MS.gene35613.t1 | AT5G56190 | 56.140 | 456 | 191 | 3 | 1 | 456 | 1 | 447 | 0.0 | 533 |
| MS.gene35613.t1 | AT5G56190 | 56.140 | 456 | 191 | 3 | 1 | 456 | 1 | 447 | 0.0 | 533 |
| MS.gene35613.t1 | AT5G56190 | 56.140 | 456 | 191 | 3 | 1 | 456 | 1 | 447 | 0.0 | 533 |
| MS.gene35613.t1 | AT5G56190 | 56.140 | 456 | 191 | 3 | 1 | 456 | 1 | 447 | 0.0 | 533 |
| MS.gene35613.t1 | AT5G56190 | 56.473 | 448 | 186 | 3 | 11 | 456 | 1 | 441 | 0.0 | 533 |
| MS.gene35613.t1 | AT5G56190 | 56.473 | 448 | 186 | 3 | 11 | 456 | 1 | 441 | 0.0 | 533 |
| MS.gene35613.t1 | AT5G56190 | 56.347 | 449 | 187 | 3 | 10 | 456 | 21 | 462 | 0.0 | 532 |
| MS.gene35613.t1 | AT3G13340 | 60.636 | 409 | 157 | 4 | 47 | 453 | 38 | 444 | 0.0 | 516 |
| MS.gene35613.t1 | AT3G13340 | 60.636 | 409 | 157 | 4 | 47 | 453 | 38 | 444 | 0.0 | 516 |
| MS.gene35613.t1 | AT3G13340 | 60.636 | 409 | 157 | 4 | 47 | 453 | 38 | 444 | 0.0 | 516 |
| MS.gene35613.t1 | AT1G55680 | 58.435 | 409 | 166 | 4 | 47 | 453 | 36 | 442 | 1.05e-178 | 507 |
| MS.gene35613.t1 | AT1G78070 | 73.482 | 313 | 83 | 0 | 141 | 453 | 25 | 337 | 6.01e-176 | 496 |
| MS.gene35613.t1 | AT1G78070 | 73.397 | 312 | 83 | 0 | 142 | 453 | 25 | 336 | 2.95e-175 | 494 |
| MS.gene35613.t1 | AT1G36070 | 71.717 | 297 | 82 | 2 | 158 | 453 | 1 | 296 | 1.22e-159 | 453 |
| MS.gene35613.t1 | AT1G36070 | 71.717 | 297 | 82 | 2 | 158 | 453 | 1 | 296 | 1.22e-159 | 453 |
| MS.gene35613.t1 | AT5G08390 | 30.137 | 146 | 90 | 2 | 302 | 436 | 64 | 208 | 1.29e-11 | 67.4 |
| MS.gene35613.t1 | AT5G23430 | 30.282 | 142 | 96 | 2 | 297 | 436 | 68 | 208 | 1.41e-11 | 67.4 |
| MS.gene35613.t1 | AT5G23430 | 30.282 | 142 | 96 | 2 | 297 | 436 | 68 | 208 | 1.43e-11 | 67.4 |
| MS.gene35613.t1 | AT5G23430 | 30.282 | 142 | 96 | 2 | 297 | 436 | 68 | 208 | 1.43e-11 | 67.4 |
| MS.gene35613.t1 | AT3G49660 | 24.832 | 149 | 110 | 2 | 289 | 436 | 74 | 221 | 4.68e-11 | 64.3 |
| MS.gene35613.t1 | AT5G25150 | 24.865 | 185 | 136 | 3 | 253 | 436 | 427 | 609 | 6.17e-11 | 65.1 |
| MS.gene35613.t1 | AT5G25150 | 24.865 | 185 | 136 | 3 | 253 | 436 | 427 | 609 | 7.06e-11 | 65.1 |
Find 112 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCAGAATTTGAATCATTC+TGG | 0.246242 | 3.3:+63895177 | MS.gene35613:intron |
| AGAGTCCATGGCGGTATTAA+AGG | 0.283802 | 3.3:+63895871 | MS.gene35613:CDS |
| CGAGATCGACGTTGTTGAAT+TGG | 0.312959 | 3.3:-63891537 | None:intergenic |
| CGGTATTAGCATCAGCTATC+AGG | 0.320426 | 3.3:-63895627 | None:intergenic |
| CAGGTCACTGGAAACCTAAA+AGG | 0.322712 | 3.3:+63895743 | MS.gene35613:intron |
| ACAAACAGAGCCTCTGTGTC+TGG | 0.330238 | 3.3:-63896055 | None:intergenic |
| AGTCAAGAGATAGATATATT+TGG | 0.331017 | 3.3:+63896007 | MS.gene35613:CDS |
| GGAAAGTTGGTAGCTGTTCT+TGG | 0.334078 | 3.3:+63895589 | MS.gene35613:CDS |
| TGGGTTGTTTCAAGTATGAT+TGG | 0.343249 | 3.3:+63895425 | MS.gene35613:CDS |
| GATATATTTGGTGAAATTGC+TGG | 0.349480 | 3.3:+63896019 | MS.gene35613:CDS |
| AAAACATTGTTATCAGTATC+TGG | 0.350725 | 3.3:+63896123 | MS.gene35613:CDS |
| GCACCCCAATGGACAAATAT+TGG | 0.353641 | 3.3:+63895796 | MS.gene35613:CDS |
| TTGTTCATCGTCTTCGAAAT+CGG | 0.355336 | 3.3:-63891599 | None:intergenic |
| ATGGTGGCAGGTGGCTTCCA+TGG | 0.362264 | 3.3:+63895050 | MS.gene35613:CDS |
| AATCAGCACCATGGCTGTTA+AGG | 0.369015 | 3.3:+63895019 | MS.gene35613:CDS |
| CGTACAAGGGTTGGAATAAC+CGG | 0.371193 | 3.3:-63894874 | None:intergenic |
| GAAAGTTGGTAGCTGTTCTT+GGG | 0.375612 | 3.3:+63895590 | MS.gene35613:CDS |
| GGGACGAATGGGTGCAATAA+GGG | 0.380199 | 3.3:+63895892 | MS.gene35613:CDS |
| GTAGCCAATATTTGTCCATT+GGG | 0.381858 | 3.3:-63895800 | None:intergenic |
| CTGATTTGCACTCGCGAGAC+AGG | 0.384707 | 3.3:-63895002 | None:intergenic |
| CAAATAATGATTCCCAAGTT+CGG | 0.389538 | 3.3:+63895374 | MS.gene35613:CDS |
| AGGGACGAATGGGTGCAATA+AGG | 0.392663 | 3.3:+63895891 | MS.gene35613:CDS |
| TTTAGATTAAACTACCTTCC+CGG | 0.402476 | 3.3:-63895647 | None:intergenic |
| GAAGACTGATACTTCGGCTT+TGG | 0.402695 | 3.3:+63891798 | MS.gene35613:CDS |
| AATATTGGCTACCGGGAATC+AGG | 0.406373 | 3.3:+63895811 | MS.gene35613:CDS |
| GCATGTTGTGTCCTGATTCC+CGG | 0.406593 | 3.3:-63895822 | None:intergenic |
| AAATAATGATTCCCAAGTTC+GGG | 0.412328 | 3.3:+63895375 | MS.gene35613:CDS |
| TGGTGGCAGGTGGCTTCCAT+GGG | 0.412500 | 3.3:+63895051 | MS.gene35613:CDS |
| ATTATTCTTTCTCATCTGCT+TGG | 0.426332 | 3.3:+63895774 | MS.gene35613:CDS |
| TCTTTGCAGTGGGTCGTTGA+GGG | 0.434362 | 3.3:+63895342 | MS.gene35613:intron |
| TTGGTCCTCATTACTACAAA+GGG | 0.446991 | 3.3:+63894825 | MS.gene35613:CDS |
| ATAGAATGCTTCTGCTAGTC+CGG | 0.447571 | 3.3:+63895564 | MS.gene35613:intron |
| AGTCAGAATCGGAGGTGTTA+CGG | 0.449444 | 3.3:-63891648 | None:intergenic |
| GACACAGAGGCTCTGTTTGT+TGG | 0.450985 | 3.3:+63896058 | MS.gene35613:CDS |
| TTCTTTGCAGTGGGTCGTTG+AGG | 0.452454 | 3.3:+63895341 | MS.gene35613:intron |
| TAATGTGAAGACTGATACTT+CGG | 0.456018 | 3.3:+63891792 | MS.gene35613:CDS |
| AGTGCTTAATGTGGCAAAAC+CGG | 0.460527 | 3.3:+63894855 | MS.gene35613:CDS |
| CGGCTTTGGAAGCACGAAAC+GGG | 0.462292 | 3.3:+63891812 | MS.gene35613:CDS |
| GGTAGCCAATATTTGTCCAT+TGG | 0.464135 | 3.3:-63895801 | None:intergenic |
| GCCTTAAAATTCACATCAGA+TGG | 0.465387 | 3.3:+63895914 | MS.gene35613:CDS |
| TTATTAGGAATGCTTGGAAG+TGG | 0.473594 | 3.3:+63892046 | MS.gene35613:intron |
| GAGTCCATGGCGGTATTAAA+GGG | 0.475701 | 3.3:+63895872 | MS.gene35613:CDS |
| CTGATAGCTGATGCTAATAC+CGG | 0.476936 | 3.3:+63895628 | MS.gene35613:CDS |
| TTTACCCCTTTGTAGTAATG+AGG | 0.482246 | 3.3:-63894830 | None:intergenic |
| TCGGCTTTGGAAGCACGAAA+CGG | 0.486547 | 3.3:+63891811 | MS.gene35613:CDS |
| GGCTGTTAAGGAAAACTTGA+TGG | 0.496023 | 3.3:+63895031 | MS.gene35613:CDS |
| TGTAGCTGAGGAATCTATTG+TGG | 0.498079 | 3.3:+63894752 | MS.gene35613:intron |
| AGGACACAACATGCAGGTTG+TGG | 0.498713 | 3.3:+63895831 | MS.gene35613:CDS |
| AAGATATTCAAGGAATTCCA+TGG | 0.500603 | 3.3:+63891836 | MS.gene35613:CDS |
| GGCGGTATTAAAGGGACGAA+TGG | 0.503870 | 3.3:+63895880 | MS.gene35613:CDS |
| CCATGGGGAGCTTCTTTGCA+AGG | 0.506745 | 3.3:+63895067 | MS.gene35613:CDS |
| TATGGTATCTCTCAGGTCAC+TGG | 0.507467 | 3.3:+63895731 | MS.gene35613:intron |
| GTAGCTGAGGAATCTATTGT+GGG | 0.509031 | 3.3:+63894753 | MS.gene35613:intron |
| TTCGAAATCGTCTTCGAAGT+CGG | 0.512225 | 3.3:-63891677 | None:intergenic |
| GTCGGAGTCGGAGTCAGAAT+CGG | 0.516418 | 3.3:-63891659 | None:intergenic |
| TGCTAGTCCGGATGGAAAGT+TGG | 0.528223 | 3.3:+63895576 | MS.gene35613:CDS |
| AATTGTTGATTTGATAAGCC+TGG | 0.529271 | 3.3:-63892105 | None:intergenic |
| TCATCTGCTTGGCACCCCAA+TGG | 0.530821 | 3.3:+63895785 | MS.gene35613:CDS |
| GGACACAACATGCAGGTTGT+GGG | 0.534397 | 3.3:+63895832 | MS.gene35613:CDS |
| AGAGGCTCTGTTTGTTGGCG+TGG | 0.535275 | 3.3:+63896063 | MS.gene35613:CDS |
| GCGGTATTAAAGGGACGAAT+GGG | 0.538171 | 3.3:+63895881 | MS.gene35613:CDS |
| AAAATATGGACAAAGTCTGC+TGG | 0.538625 | 3.3:-63895959 | None:intergenic |
| ATCGTCTTCGAAGTCGGAGT+CGG | 0.540579 | 3.3:-63891671 | None:intergenic |
| CTAACAAGCTACCGTAGGTT+CGG | 0.542132 | 3.3:-63896090 | None:intergenic |
| GAATGCTTGGAAGTGGAGAA+AGG | 0.547263 | 3.3:+63892053 | MS.gene35613:CDS |
| AGGTCACTGGAAACCTAAAA+GGG | 0.548717 | 3.3:+63895744 | MS.gene35613:intron |
| AATGGACAAATATTGGCTAC+CGG | 0.554682 | 3.3:+63895803 | MS.gene35613:CDS |
| GCGGAAAACATCCACTGCGT+TGG | 0.554722 | 3.3:-63895244 | None:intergenic |
| ACAGCTACCAACTTTCCATC+CGG | 0.555176 | 3.3:-63895583 | None:intergenic |
| TGGAAACCTAAAAGGGCACT+TGG | 0.558556 | 3.3:+63895751 | MS.gene35613:CDS |
| AAGAAATCTTTCAGAGTCCA+TGG | 0.559079 | 3.3:+63895859 | MS.gene35613:CDS |
| AAAGTCTGCTGGCTCAGCCA+TGG | 0.560344 | 3.3:-63895948 | None:intergenic |
| GGCGTGGCTGACCGAACCTA+CGG | 0.565701 | 3.3:+63896079 | MS.gene35613:CDS |
| AAGTAGCTACGTACAAGGGT+TGG | 0.572809 | 3.3:-63894883 | None:intergenic |
| AAGGAAAACTTGATGGTGGC+AGG | 0.574431 | 3.3:+63895038 | MS.gene35613:CDS |
| AAAACTACTCTGTGATGCAT+TGG | 0.575459 | 3.3:+63894806 | MS.gene35613:CDS |
| CGAAACGGGAAAGATATTCA+AGG | 0.575551 | 3.3:+63891826 | MS.gene35613:CDS |
| CAAACAGAGCCTCTGTGTCT+GGG | 0.578526 | 3.3:-63896054 | None:intergenic |
| AATGCTTCTGCTAGTCCGGA+TGG | 0.579771 | 3.3:+63895568 | MS.gene35613:CDS |
| GTTCTTGGGGACAGTACTGA+AGG | 0.589102 | 3.3:+63895604 | MS.gene35613:CDS |
| TTTGCACTCGCGAGACAGGG+TGG | 0.592559 | 3.3:-63894998 | None:intergenic |
| CTTCGAAGACGATTTCGAAA+CGG | 0.593406 | 3.3:+63891681 | MS.gene35613:CDS |
| CTATAATTAAGCTTCTCCCA+TGG | 0.593787 | 3.3:-63891853 | None:intergenic |
| TAGATGCTTACCTAGGATTG+CGG | 0.596184 | 3.3:-63895263 | None:intergenic |
| TGATTTGCACTCGCGAGACA+GGG | 0.598123 | 3.3:-63895001 | None:intergenic |
| AAAAGAAATTAACCTTGTCA+AGG | 0.602823 | 3.3:-63891948 | None:intergenic |
| GGAATCAGGACACAACATGC+AGG | 0.603356 | 3.3:+63895825 | MS.gene35613:CDS |
| TCGTCCCTTTAATACCGCCA+TGG | 0.605666 | 3.3:-63895876 | None:intergenic |
| GTACTTTAGCAGAAGCATTG+TGG | 0.611191 | 3.3:+63894969 | MS.gene35613:intron |
| ATTGGTCCTCATTACTACAA+AGG | 0.613083 | 3.3:+63894824 | MS.gene35613:CDS |
| TCGGAGGTGTTACGGTGAGG+AGG | 0.616059 | 3.3:-63891640 | None:intergenic |
| GGTGGCAGGTGGCTTCCATG+GGG | 0.618672 | 3.3:+63895052 | MS.gene35613:CDS |
| TTGCACTCGCGAGACAGGGT+GGG | 0.623685 | 3.3:-63894997 | None:intergenic |
| AGATATTCAAGGAATTCCAT+GGG | 0.623721 | 3.3:+63891837 | MS.gene35613:CDS |
| ATGGACAAATATTGGCTACC+GGG | 0.626683 | 3.3:+63895804 | MS.gene35613:CDS |
| AGCTGATGCTAATACCGGGA+AGG | 0.627809 | 3.3:+63895633 | MS.gene35613:CDS |
| TAGCCAATATTTGTCCATTG+GGG | 0.631857 | 3.3:-63895799 | None:intergenic |
| CCTTGCAAAGAAGCTCCCCA+TGG | 0.634860 | 3.3:-63895067 | None:intergenic |
| CCTTAAAATTCACATCAGAT+GGG | 0.638694 | 3.3:+63895915 | MS.gene35613:CDS |
| TGATAGCTGATGCTAATACC+GGG | 0.645103 | 3.3:+63895629 | MS.gene35613:CDS |
| CTCTCGTGAAGACCTTGACA+AGG | 0.646657 | 3.3:+63891936 | MS.gene35613:CDS |
| GAAAACTTGATGGTGGCAGG+TGG | 0.651921 | 3.3:+63895041 | MS.gene35613:CDS |
| GGAGTCGGAGTCAGAATCGG+AGG | 0.657638 | 3.3:-63891656 | None:intergenic |
| GAACTCTAACAAGCTACCGT+AGG | 0.660581 | 3.3:-63896095 | None:intergenic |
| GGGTAAAGAAGTGCTTAATG+TGG | 0.669266 | 3.3:+63894846 | MS.gene35613:CDS |
| AAAGTTGGTAGCTGTTCTTG+GGG | 0.679274 | 3.3:+63895591 | MS.gene35613:CDS |
| GAATCGGAGGTGTTACGGTG+AGG | 0.688099 | 3.3:-63891643 | None:intergenic |
| TAGTGCTATAACCAACGCAG+TGG | 0.693836 | 3.3:+63895233 | MS.gene35613:CDS |
| GCGAGTGCAAATCAGCACCA+TGG | 0.713411 | 3.3:+63895010 | MS.gene35613:CDS |
| TGGTCCTCATTACTACAAAG+GGG | 0.724620 | 3.3:+63894826 | MS.gene35613:CDS |
| TGTTAAGGAAAACTTGATGG+TGG | 0.731187 | 3.3:+63895034 | MS.gene35613:CDS |
| AAATCTTTCAGAGTCCATGG+CGG | 0.791786 | 3.3:+63895862 | MS.gene35613:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGTTTATATCAATTAAA+AGG | - | chr3.3:63893921-63893940 | None:intergenic | 10.0% |
| !! | TATATATAGAAAAAATTGTT+TGG | - | chr3.3:63892617-63892636 | None:intergenic | 10.0% |
| !! | TTCTGATTATATATAATTTA+TGG | + | chr3.3:63895713-63895732 | MS.gene35613:intron | 10.0% |
| !! | AGAATTTAAATGAAACAATA+AGG | - | chr3.3:63895697-63895716 | None:intergenic | 15.0% |
| !! | TACATAAATATTTACATGAA+AGG | - | chr3.3:63892991-63893010 | None:intergenic | 15.0% |
| !! | TGGATTTACTTATAAAATTA+AGG | - | chr3.3:63893129-63893148 | None:intergenic | 15.0% |
| !! | TTATATTGAATGTAAGAAAA+AGG | - | chr3.3:63893384-63893403 | None:intergenic | 15.0% |
| !!! | AAAAATCAAAAGTGTTAAAA+AGG | - | chr3.3:63895152-63895171 | None:intergenic | 15.0% |
| !!! | AAAATCAAAAGTGTTAAAAA+GGG | - | chr3.3:63895151-63895170 | None:intergenic | 15.0% |
| !!! | ATAAGTAAATCCATTTTTTT+GGG | + | chr3.3:63893136-63893155 | MS.gene35613:intron | 15.0% |
| !!! | TATAAGTAAATCCATTTTTT+TGG | + | chr3.3:63893135-63893154 | MS.gene35613:intron | 15.0% |
| !!! | TTAATCTAAAGATGTTTTTT+AGG | + | chr3.3:63895660-63895679 | MS.gene35613:intron | 15.0% |
| !! | AACAACTTATTAAAGTTTGA+GGG | + | chr3.3:63892770-63892789 | MS.gene35613:intron | 20.0% |
| !! | ACTCAAATTCTTTCTTAAAA+CGG | + | chr3.3:63893199-63893218 | MS.gene35613:intron | 20.0% |
| !! | AGTTAAATAAGATGAAATTG+AGG | - | chr3.3:63894941-63894960 | None:intergenic | 20.0% |
| !! | ATCTAAATGAAGCATATATT+TGG | + | chr3.3:63895281-63895300 | MS.gene35613:intron | 20.0% |
| !! | CTTTAAATCCTTATATAAAG+GGG | - | chr3.3:63892710-63892729 | None:intergenic | 20.0% |
| !! | TAACAACTTATTAAAGTTTG+AGG | + | chr3.3:63892769-63892788 | MS.gene35613:intron | 20.0% |
| !! | TAGAAATGAGAAAGAATATA+TGG | - | chr3.3:63893260-63893279 | None:intergenic | 20.0% |
| !! | TATAATCATCATAAAGAACT+TGG | + | chr3.3:63894351-63894370 | MS.gene35613:intron | 20.0% |
| !! | TCATGTAAATATTTATGTAC+TGG | + | chr3.3:63892992-63893011 | MS.gene35613:intron | 20.0% |
| !! | TGTTTATATCAATTAAAAGG+AGG | - | chr3.3:63893918-63893937 | None:intergenic | 20.0% |
| !!! | AAATCAAAAGTGTTAAAAAG+GGG | - | chr3.3:63895150-63895169 | None:intergenic | 20.0% |
| !!! | ATTTTGTTGCTATATTCATT+TGG | + | chr3.3:63892155-63892174 | MS.gene35613:intron | 20.0% |
| !!! | GCTTTAAATCCTTATATAAA+GGG | - | chr3.3:63892711-63892730 | None:intergenic | 20.0% |
| !!! | GTTAATTTCTTTTTTTACTG+TGG | + | chr3.3:63891958-63891977 | MS.gene35613:intron | 20.0% |
| !!! | TATGTAACCCATATATTTTT+TGG | + | chr3.3:63892663-63892682 | MS.gene35613:intron | 20.0% |
| !!! | TGCTTTAAATCCTTATATAA+AGG | - | chr3.3:63892712-63892731 | None:intergenic | 20.0% |
| !!! | TTCACTATTTTCGTTTATTT+AGG | + | chr3.3:63891713-63891732 | MS.gene35613:intron | 20.0% |
| !!! | TTTTTTGTATATGAATTCCT+TGG | + | chr3.3:63894323-63894342 | MS.gene35613:intron | 20.0% |
| ! | AAAACATTGTTATCAGTATC+TGG | + | chr3.3:63896123-63896142 | MS.gene35613:CDS | 25.0% |
| ! | AAAAGAAATTAACCTTGTCA+AGG | - | chr3.3:63891951-63891970 | None:intergenic | 25.0% |
| ! | AAACGAAAATAGTGAAGAAA+CGG | - | chr3.3:63891709-63891728 | None:intergenic | 25.0% |
| ! | ACAACTTATTAAAGTTTGAG+GGG | + | chr3.3:63892771-63892790 | MS.gene35613:intron | 25.0% |
| ! | AGAATTTGAGTATACAAGAT+AGG | - | chr3.3:63893190-63893209 | None:intergenic | 25.0% |
| ! | AGTCAAGAGATAGATATATT+TGG | + | chr3.3:63896007-63896026 | MS.gene35613:CDS | 25.0% |
| ! | ATGATCATATATTTCTCCTT+GGG | + | chr3.3:63894695-63894714 | MS.gene35613:intron | 25.0% |
| ! | ATGATGATTATAGTATACCA+AGG | - | chr3.3:63894343-63894362 | None:intergenic | 25.0% |
| ! | ATTAACAGTTACAGTTATAG+TGG | - | chr3.3:63893788-63893807 | None:intergenic | 25.0% |
| ! | CAGAATGTGAATCAAAAATA+TGG | - | chr3.3:63895976-63895995 | None:intergenic | 25.0% |
| ! | TAATATTGATGTTATCAACG+TGG | + | chr3.3:63894721-63894740 | MS.gene35613:intron | 25.0% |
| ! | TATAATTTATGGTATCTCTC+AGG | + | chr3.3:63895724-63895743 | MS.gene35613:intron | 25.0% |
| ! | TATGATCATATATTTCTCCT+TGG | + | chr3.3:63894694-63894713 | MS.gene35613:intron | 25.0% |
| ! | TCTTACTTTGAATTTCTGTT+TGG | + | chr3.3:63894243-63894262 | MS.gene35613:intron | 25.0% |
| ! | TTCAAAAGAATTATCTCCAA+TGG | + | chr3.3:63893231-63893250 | MS.gene35613:intron | 25.0% |
| !! | AAGAACTTGGTATAATTTGT+TGG | + | chr3.3:63894364-63894383 | MS.gene35613:intron | 25.0% |
| !! | ATACTGATAACAATGTTTTC+TGG | - | chr3.3:63896122-63896141 | None:intergenic | 25.0% |
| !! | ATGATTTTCAGTTTAATACC+AGG | + | chr3.3:63892087-63892106 | MS.gene35613:CDS | 25.0% |
| !! | CTTCACTTAAAATTCACTTT+TGG | + | chr3.3:63892918-63892937 | MS.gene35613:intron | 25.0% |
| !! | TGTATTGATACCAATACTTT+AGG | + | chr3.3:63893519-63893538 | MS.gene35613:intron | 25.0% |
| !!! | AAGTTTTGTCCAATTTCTAT+TGG | - | chr3.3:63892848-63892867 | None:intergenic | 25.0% |
| !!! | AATCAAAAGTGTTAAAAAGG+GGG | - | chr3.3:63895149-63895168 | None:intergenic | 25.0% |
| !!! | AGAAAGTTATAGGCTTTTTT+TGG | + | chr3.3:63892455-63892474 | MS.gene35613:intron | 25.0% |
| !!! | CATATTTTTGATTCACATTC+TGG | + | chr3.3:63895974-63895993 | MS.gene35613:CDS | 25.0% |
| !!! | GCATATATTTGGAATTTTTG+TGG | + | chr3.3:63895292-63895311 | MS.gene35613:intron | 25.0% |
| !!! | TTTTTGTTATTAGGAATGCT+TGG | + | chr3.3:63892040-63892059 | MS.gene35613:intron | 25.0% |
| AAAATAAGTAGCTACGTACA+AGG | - | chr3.3:63894891-63894910 | None:intergenic | 30.0% | |
| AAAGAATATATGGTGTCCAT+TGG | - | chr3.3:63893250-63893269 | None:intergenic | 30.0% | |
| AAATAAGTAGCTACGTACAA+GGG | - | chr3.3:63894890-63894909 | None:intergenic | 30.0% | |
| AAATAATGATTCCCAAGTTC+GGG | + | chr3.3:63895375-63895394 | MS.gene35613:CDS | 30.0% | |
| AACATCAATATTAACACCCA+AGG | - | chr3.3:63894714-63894733 | None:intergenic | 30.0% | |
| AAGATATTCAAGGAATTCCA+TGG | + | chr3.3:63891836-63891855 | MS.gene35613:CDS | 30.0% | |
| AAGCTATCTTATAGAGTGTA+TGG | - | chr3.3:63892483-63892502 | None:intergenic | 30.0% | |
| AAGCTTGTATGAGAACAATT+TGG | + | chr3.3:63892516-63892535 | MS.gene35613:intron | 30.0% | |
| ACCTAAGTTTATGGTATGAT+AGG | + | chr3.3:63894040-63894059 | MS.gene35613:intron | 30.0% | |
| ACGAATACATAAACCATAGA+AGG | - | chr3.3:63893895-63893914 | None:intergenic | 30.0% | |
| ACTTATGCAAAGCTCATATT+TGG | + | chr3.3:63893019-63893038 | MS.gene35613:intron | 30.0% | |
| AGAGTATGTCACTAAAAAGT+TGG | + | chr3.3:63893549-63893568 | MS.gene35613:intron | 30.0% | |
| AGATATTCAAGGAATTCCAT+GGG | + | chr3.3:63891837-63891856 | MS.gene35613:CDS | 30.0% | |
| ATAAGCTATTCATCCAAAAC+AGG | + | chr3.3:63892590-63892609 | MS.gene35613:intron | 30.0% | |
| ATTATTCTTTCTCATCTGCT+TGG | + | chr3.3:63895774-63895793 | MS.gene35613:CDS | 30.0% | |
| CAAATAATGATTCCCAAGTT+CGG | + | chr3.3:63895374-63895393 | MS.gene35613:CDS | 30.0% | |
| CATATTTAGTAGCAGAAAAC+TGG | - | chr3.3:63893861-63893880 | None:intergenic | 30.0% | |
| CATCCTGCCAAAAAATATAT+GGG | - | chr3.3:63892673-63892692 | None:intergenic | 30.0% | |
| CCTTAAAATTCACATCAGAT+GGG | + | chr3.3:63895915-63895934 | MS.gene35613:CDS | 30.0% | |
| CGAATACATAAACCATAGAA+GGG | - | chr3.3:63893894-63893913 | None:intergenic | 30.0% | |
| CTTAACCTGTTTATGCATTT+AGG | + | chr3.3:63893970-63893989 | MS.gene35613:intron | 30.0% | |
| GAATACATAAACCATAGAAG+GGG | - | chr3.3:63893893-63893912 | None:intergenic | 30.0% | |
| GATATCACTCTAAACAAATC+AGG | - | chr3.3:63894662-63894681 | None:intergenic | 30.0% | |
| GGTCATCAACATAATTTCTA+TGG | - | chr3.3:63892970-63892989 | None:intergenic | 30.0% | |
| GGTTATGATATCTAATTGGA+AGG | - | chr3.3:63894433-63894452 | None:intergenic | 30.0% | |
| GTTAAAACCAACAATCTGTT+CGG | + | chr3.3:63893591-63893610 | MS.gene35613:intron | 30.0% | |
| TAACGAAAATTAATGCACTG+TGG | - | chr3.3:63893575-63893594 | None:intergenic | 30.0% | |
| TAAGCTATTCATCCAAAACA+GGG | + | chr3.3:63892591-63892610 | MS.gene35613:intron | 30.0% | |
| TAATGTGAAGACTGATACTT+CGG | + | chr3.3:63891792-63891811 | MS.gene35613:CDS | 30.0% | |
| TAATTACCTGTGTATGAAGT+GGG | - | chr3.3:63894454-63894473 | None:intergenic | 30.0% | |
| TACCAGAATTTGAATCATTC+TGG | + | chr3.3:63895177-63895196 | MS.gene35613:intron | 30.0% | |
| TCCTATCATACCATAAACTT+AGG | - | chr3.3:63894044-63894063 | None:intergenic | 30.0% | |
| TCTGCTAAATCCTAAAGTAT+TGG | - | chr3.3:63893532-63893551 | None:intergenic | 30.0% | |
| TGACTGTTTCAGAAAGTTAT+AGG | + | chr3.3:63892445-63892464 | MS.gene35613:intron | 30.0% | |
| TGTTGCTATATTCATTTGGT+GGG | + | chr3.3:63892159-63892178 | MS.gene35613:intron | 30.0% | |
| TTAAAACCAACAATCTGTTC+GGG | + | chr3.3:63893592-63893611 | MS.gene35613:intron | 30.0% | |
| TTGTTGCTATATTCATTTGG+TGG | + | chr3.3:63892158-63892177 | MS.gene35613:intron | 30.0% | |
| TTTAGATTAAACTACCTTCC+CGG | - | chr3.3:63895650-63895669 | None:intergenic | 30.0% | |
| ! | ACATTTTGCTCCCAAAAAAA+TGG | - | chr3.3:63893149-63893168 | None:intergenic | 30.0% |
| ! | ATCAACAATTGCACATTTTC+AGG | + | chr3.3:63892118-63892137 | MS.gene35613:CDS | 30.0% |
| ! | GATATATTTGGTGAAATTGC+TGG | + | chr3.3:63896019-63896038 | MS.gene35613:CDS | 30.0% |
| !! | AATTGTTGATTTGATAAGCC+TGG | - | chr3.3:63892108-63892127 | None:intergenic | 30.0% |
| !! | AGTGGGTTATGATATCTAAT+TGG | - | chr3.3:63894437-63894456 | None:intergenic | 30.0% |
| !! | ATTTTAGTGATTTCCTGTCA+AGG | + | chr3.3:63893352-63893371 | MS.gene35613:intron | 30.0% |
| !! | CTGCTTTAAAGAGAAATAGA+AGG | - | chr3.3:63893996-63894015 | None:intergenic | 30.0% |
| !! | CTTCTATTTCTCTTTAAAGC+AGG | + | chr3.3:63893994-63894013 | MS.gene35613:intron | 30.0% |
| !!! | GTTAACGAGAGTTTTGATTT+TGG | + | chr3.3:63891754-63891773 | MS.gene35613:intron | 30.0% |
| !!! | TAACCCATATATTTTTTGGC+AGG | + | chr3.3:63892667-63892686 | MS.gene35613:intron | 30.0% |
| !!! | TTTTGGTATTCTAGTTTTGC+AGG | + | chr3.3:63892638-63892657 | MS.gene35613:intron | 30.0% |
| AAAACTACTCTGTGATGCAT+TGG | + | chr3.3:63894806-63894825 | MS.gene35613:CDS | 35.0% | |
| AAAATATGGACAAAGTCTGC+TGG | - | chr3.3:63895962-63895981 | None:intergenic | 35.0% | |
| AAGAAATCTTTCAGAGTCCA+TGG | + | chr3.3:63895859-63895878 | MS.gene35613:CDS | 35.0% | |
| AATATCTGACCACATTTGAG+AGG | + | chr3.3:63894065-63894084 | MS.gene35613:intron | 35.0% | |
| AGAAGCTTTCGCATAATGTT+TGG | + | chr3.3:63894136-63894155 | MS.gene35613:intron | 35.0% | |
| ATATCTGACCACATTTGAGA+GGG | + | chr3.3:63894066-63894085 | MS.gene35613:intron | 35.0% | |
| ATGAAGTGCAAATGCCTAAA+TGG | - | chr3.3:63894515-63894534 | None:intergenic | 35.0% | |
| ATGACTTTAAACAACGCTGA+AGG | - | chr3.3:63894279-63894298 | None:intergenic | 35.0% | |
| ATGCATCCATATCCATCAAT+TGG | - | chr3.3:63893302-63893321 | None:intergenic | 35.0% | |
| ATTGGTCCTCATTACTACAA+AGG | + | chr3.3:63894824-63894843 | MS.gene35613:CDS | 35.0% | |
| ATTTATCTTTGTGCCACAAG+TGG | - | chr3.3:63893739-63893758 | None:intergenic | 35.0% | |
| CAATCAATCACACAACATCA+TGG | - | chr3.3:63894484-63894503 | None:intergenic | 35.0% | |
| CATGCTTGACATATGAGTTA+TGG | + | chr3.3:63892362-63892381 | MS.gene35613:intron | 35.0% | |
| CCATCCTGCCAAAAAATATA+TGG | - | chr3.3:63892674-63892693 | None:intergenic | 35.0% | |
| CTATAATTAAGCTTCTCCCA+TGG | - | chr3.3:63891856-63891875 | None:intergenic | 35.0% | |
| CTCCAGAATGATTCAAATTC+TGG | - | chr3.3:63895182-63895201 | None:intergenic | 35.0% | |
| CTTCATTTAGATGCTTACCT+AGG | - | chr3.3:63895273-63895292 | None:intergenic | 35.0% | |
| GAATCTTAATCGACAGGAAA+AGG | - | chr3.3:63893488-63893507 | None:intergenic | 35.0% | |
| GCCTTAAAATTCACATCAGA+TGG | + | chr3.3:63895914-63895933 | MS.gene35613:CDS | 35.0% | |
| GTAATTACCTGTGTATGAAG+TGG | - | chr3.3:63894455-63894474 | None:intergenic | 35.0% | |
| GTAGCCAATATTTGTCCATT+GGG | - | chr3.3:63895803-63895822 | None:intergenic | 35.0% | |
| TAAAACCAACAATCTGTTCG+GGG | + | chr3.3:63893593-63893612 | MS.gene35613:intron | 35.0% | |
| TAGCCAATATTTGTCCATTG+GGG | - | chr3.3:63895802-63895821 | None:intergenic | 35.0% | |
| TCCTCTTGAAGATTTCAGTA+AGG | - | chr3.3:63893652-63893671 | None:intergenic | 35.0% | |
| TCCTTACTGAAATCTTCAAG+AGG | + | chr3.3:63893648-63893667 | MS.gene35613:intron | 35.0% | |
| TGCTTCTGCTAAAGTACATA+AGG | - | chr3.3:63894966-63894985 | None:intergenic | 35.0% | |
| TGTACTGAATCTTAATCGAC+AGG | - | chr3.3:63893494-63893513 | None:intergenic | 35.0% | |
| TGTTAAGGAAAACTTGATGG+TGG | + | chr3.3:63895034-63895053 | MS.gene35613:CDS | 35.0% | |
| TTATTAGGAATGCTTGGAAG+TGG | + | chr3.3:63892046-63892065 | MS.gene35613:intron | 35.0% | |
| TTGGTCCTCATTACTACAAA+GGG | + | chr3.3:63894825-63894844 | MS.gene35613:CDS | 35.0% | |
| TTGTTCATCGTCTTCGAAAT+CGG | - | chr3.3:63891602-63891621 | None:intergenic | 35.0% | |
| TTTACCCCTTTGTAGTAATG+AGG | - | chr3.3:63894833-63894852 | None:intergenic | 35.0% | |
| TTTGTAACTGACCTTACTTC+AGG | + | chr3.3:63893095-63893114 | MS.gene35613:intron | 35.0% | |
| ! | AAAATTGTTTGGCCCTGTTT+TGG | - | chr3.3:63892606-63892625 | None:intergenic | 35.0% |
| ! | AACTGTCTATTTCTTTGCAG+TGG | + | chr3.3:63895331-63895350 | MS.gene35613:intron | 35.0% |
| ! | AATAATCCAAGTGCCCTTTT+AGG | - | chr3.3:63895760-63895779 | None:intergenic | 35.0% |
| ! | AATGGACAAATATTGGCTAC+CGG | + | chr3.3:63895803-63895822 | MS.gene35613:CDS | 35.0% |
| ! | ACTGTCTATTTCTTTGCAGT+GGG | + | chr3.3:63895332-63895351 | MS.gene35613:intron | 35.0% |
| ! | CCCATCTGATGTGAATTTTA+AGG | - | chr3.3:63895918-63895937 | None:intergenic | 35.0% |
| ! | CTATATTCATTTGGTGGGAT+TGG | + | chr3.3:63892164-63892183 | MS.gene35613:intron | 35.0% |
| ! | GAAGTTTTCATGCCAATTGA+TGG | + | chr3.3:63893287-63893306 | MS.gene35613:intron | 35.0% |
| ! | TGATCTCAAGTGTTGTATGT+GGG | - | chr3.3:63893437-63893456 | None:intergenic | 35.0% |
| ! | TGGGTTGTTTCAAGTATGAT+TGG | + | chr3.3:63895425-63895444 | MS.gene35613:CDS | 35.0% |
| ! | TTCATGCCAATTGATGGATA+TGG | + | chr3.3:63893293-63893312 | MS.gene35613:intron | 35.0% |
| !! | AAAAAGGCTTTTTCCTTGAC+AGG | - | chr3.3:63893368-63893387 | None:intergenic | 35.0% |
| !! | CTATTTCTCTTTAAAGCAGG+TGG | + | chr3.3:63893997-63894016 | MS.gene35613:intron | 35.0% |
| !! | GCTTTAGTTCTAACTCTGTT+TGG | + | chr3.3:63892336-63892355 | MS.gene35613:intron | 35.0% |
| !! | TCACAGAGTAGTTTTGCATA+AGG | - | chr3.3:63894801-63894820 | None:intergenic | 35.0% |
| !!! | CCATATATTTTTTGGCAGGA+TGG | + | chr3.3:63892671-63892690 | MS.gene35613:intron | 35.0% |
| !!! | CGAGAGTTTTGATTTTGGTT+TGG | + | chr3.3:63891759-63891778 | MS.gene35613:intron | 35.0% |
| AAATCTTTCAGAGTCCATGG+CGG | + | chr3.3:63895862-63895881 | MS.gene35613:CDS | 40.0% | |
| ACCCACCGTTCTAACATTTA+CGG | + | chr3.3:63894610-63894629 | MS.gene35613:intron | 40.0% | |
| AGGACCCGTAAATGTTAGAA+CGG | - | chr3.3:63894618-63894637 | None:intergenic | 40.0% | |
| AGGCTCAAAATCCTGAAGTA+AGG | - | chr3.3:63893109-63893128 | None:intergenic | 40.0% | |
| AGGTCACTGGAAACCTAAAA+GGG | + | chr3.3:63895744-63895763 | MS.gene35613:intron | 40.0% | |
| AGTGCTTAATGTGGCAAAAC+CGG | + | chr3.3:63894855-63894874 | MS.gene35613:CDS | 40.0% | |
| ATAGAATGCTTCTGCTAGTC+CGG | + | chr3.3:63895564-63895583 | MS.gene35613:intron | 40.0% | |
| ATATGGATGCATCAAGGCTA+TGG | + | chr3.3:63893310-63893329 | MS.gene35613:intron | 40.0% | |
| CGAAACGGGAAAGATATTCA+AGG | + | chr3.3:63891826-63891845 | MS.gene35613:CDS | 40.0% | |
| CTGATAGCTGATGCTAATAC+CGG | + | chr3.3:63895628-63895647 | MS.gene35613:CDS | 40.0% | |
| CTTAATCGACAGGAAAAGGA+TGG | - | chr3.3:63893484-63893503 | None:intergenic | 40.0% | |
| CTTCAAGAGGAAAGCTTACA+TGG | + | chr3.3:63893661-63893680 | MS.gene35613:intron | 40.0% | |
| CTTCGAAGACGATTTCGAAA+CGG | + | chr3.3:63891681-63891700 | MS.gene35613:CDS | 40.0% | |
| CTTGGGAAGACCTAAGTTTA+TGG | + | chr3.3:63894031-63894050 | MS.gene35613:intron | 40.0% | |
| GAAGGCCTAAATGCATAAAC+AGG | - | chr3.3:63893978-63893997 | None:intergenic | 40.0% | |
| GGCTGACATATTGTCTTAGT+TGG | + | chr3.3:63893682-63893701 | MS.gene35613:intron | 40.0% | |
| GGCTGTTAAGGAAAACTTGA+TGG | + | chr3.3:63895031-63895050 | MS.gene35613:CDS | 40.0% | |
| GGTAGCCAATATTTGTCCAT+TGG | - | chr3.3:63895804-63895823 | None:intergenic | 40.0% | |
| GGTGGGTATAATATGTCAGA+TGG | - | chr3.3:63894597-63894616 | None:intergenic | 40.0% | |
| GTAGCTGAGGAATCTATTGT+GGG | + | chr3.3:63894753-63894772 | MS.gene35613:intron | 40.0% | |
| GTGTTATACTTATGTGCGTC+TGG | + | chr3.3:63892885-63892904 | MS.gene35613:intron | 40.0% | |
| GTTATGGCTATGAACGTGTT+TGG | + | chr3.3:63892378-63892397 | MS.gene35613:intron | 40.0% | |
| TAGATGCTTACCTAGGATTG+CGG | - | chr3.3:63895266-63895285 | None:intergenic | 40.0% | |
| TCATAACCCACTTCATACAC+AGG | + | chr3.3:63894445-63894464 | MS.gene35613:intron | 40.0% | |
| TGATAGCTGATGCTAATACC+GGG | + | chr3.3:63895629-63895648 | MS.gene35613:CDS | 40.0% | |
| TGCATCAAAAACCCGAACTT+GGG | - | chr3.3:63895389-63895408 | None:intergenic | 40.0% | |
| TGGTCCTCATTACTACAAAG+GGG | + | chr3.3:63894826-63894845 | MS.gene35613:CDS | 40.0% | |
| TGTAGCTGAGGAATCTATTG+TGG | + | chr3.3:63894752-63894771 | MS.gene35613:intron | 40.0% | |
| TTCGAAATCGTCTTCGAAGT+CGG | - | chr3.3:63891680-63891699 | None:intergenic | 40.0% | |
| TTTATACTACCACATCCAGC+TGG | + | chr3.3:63892312-63892331 | MS.gene35613:intron | 40.0% | |
| ! | ATGGACAAATATTGGCTACC+GGG | + | chr3.3:63895804-63895823 | MS.gene35613:CDS | 40.0% |
| ! | CAAGTTTTCCTTAACAGCCA+TGG | - | chr3.3:63895030-63895049 | None:intergenic | 40.0% |
| ! | CACATCAGATGGGAAGTTTT+TGG | + | chr3.3:63895925-63895944 | MS.gene35613:CDS | 40.0% |
| ! | CTGATCTCAAGTGTTGTATG+TGG | - | chr3.3:63893438-63893457 | None:intergenic | 40.0% |
| ! | GCAGAGAATTTTGTTGCTCT+GGG | + | chr3.3:63895406-63895425 | MS.gene35613:CDS | 40.0% |
| ! | TGATGGATATGGATGCATCA+AGG | + | chr3.3:63893304-63893323 | MS.gene35613:intron | 40.0% |
| ! | TGATTGTGCATCGACCATTT+AGG | + | chr3.3:63894498-63894517 | MS.gene35613:intron | 40.0% |
| ! | TGCAGAGAATTTTGTTGCTC+TGG | + | chr3.3:63895405-63895424 | MS.gene35613:CDS | 40.0% |
| ! | TTTTGGCAGGATGGAATTAG+AGG | + | chr3.3:63892680-63892699 | MS.gene35613:intron | 40.0% |
| !! | AAAGTTGGTAGCTGTTCTTG+GGG | + | chr3.3:63895591-63895610 | MS.gene35613:CDS | 40.0% |
| !! | GAAAGTTGGTAGCTGTTCTT+GGG | + | chr3.3:63895590-63895609 | MS.gene35613:CDS | 40.0% |
| !! | GGGTAAAGAAGTGCTTAATG+TGG | + | chr3.3:63894846-63894865 | MS.gene35613:CDS | 40.0% |
| !! | GTACTTTAGCAGAAGCATTG+TGG | + | chr3.3:63894969-63894988 | MS.gene35613:intron | 40.0% |
| AAGTAGCTACGTACAAGGGT+TGG | - | chr3.3:63894886-63894905 | None:intergenic | 45.0% | |
| AATCAGCACCATGGCTGTTA+AGG | + | chr3.3:63895019-63895038 | MS.gene35613:CDS | 45.0% | |
| ACAGCTACCAACTTTCCATC+CGG | - | chr3.3:63895586-63895605 | None:intergenic | 45.0% | |
| ACCCGTAAATGTTAGAACGG+TGG | - | chr3.3:63894615-63894634 | None:intergenic | 45.0% | |
| AGAGTCCATGGCGGTATTAA+AGG | + | chr3.3:63895871-63895890 | MS.gene35613:CDS | 45.0% | |
| CAGGTCACTGGAAACCTAAA+AGG | + | chr3.3:63895743-63895762 | MS.gene35613:intron | 45.0% | |
| CCAATTTCTATTGGTGCACG+TGG | - | chr3.3:63892839-63892858 | None:intergenic | 45.0% | |
| CCACGTGCACCAATAGAAAT+TGG | + | chr3.3:63892836-63892855 | MS.gene35613:intron | 45.0% | |
| CCCACCGTTCTAACATTTAC+GGG | + | chr3.3:63894611-63894630 | MS.gene35613:intron | 45.0% | |
| CCCGTAAATGTTAGAACGGT+GGG | - | chr3.3:63894614-63894633 | None:intergenic | 45.0% | |
| CGAGATCGACGTTGTTGAAT+TGG | - | chr3.3:63891540-63891559 | None:intergenic | 45.0% | |
| CGGTATTAGCATCAGCTATC+AGG | - | chr3.3:63895630-63895649 | None:intergenic | 45.0% | |
| CGTACAAGGGTTGGAATAAC+CGG | - | chr3.3:63894877-63894896 | None:intergenic | 45.0% | |
| CTAACAAGCTACCGTAGGTT+CGG | - | chr3.3:63896093-63896112 | None:intergenic | 45.0% | |
| CTGCATCAAAAACCCGAACT+TGG | - | chr3.3:63895390-63895409 | None:intergenic | 45.0% | |
| GAACTCTAACAAGCTACCGT+AGG | - | chr3.3:63896098-63896117 | None:intergenic | 45.0% | |
| GAAGACTGATACTTCGGCTT+TGG | + | chr3.3:63891798-63891817 | MS.gene35613:CDS | 45.0% | |
| GAATGCTTGGAAGTGGAGAA+AGG | + | chr3.3:63892053-63892072 | MS.gene35613:CDS | 45.0% | |
| GAGTCCATGGCGGTATTAAA+GGG | + | chr3.3:63895872-63895891 | MS.gene35613:CDS | 45.0% | |
| GCACCCCAATGGACAAATAT+TGG | + | chr3.3:63895796-63895815 | MS.gene35613:CDS | 45.0% | |
| GCGGTATTAAAGGGACGAAT+GGG | + | chr3.3:63895881-63895900 | MS.gene35613:CDS | 45.0% | |
| GCTGTCTTAGTTACCACTTG+TGG | + | chr3.3:63893723-63893742 | MS.gene35613:intron | 45.0% | |
| TAGTGCTATAACCAACGCAG+TGG | + | chr3.3:63895233-63895252 | MS.gene35613:CDS | 45.0% | |
| TATGGTATCTCTCAGGTCAC+TGG | + | chr3.3:63895731-63895750 | MS.gene35613:intron | 45.0% | |
| TCAGCCCTAACGACTTATGA+AGG | + | chr3.3:63895123-63895142 | MS.gene35613:intron | 45.0% | |
| TCCTGTTCAACGCTAGAATG+TGG | + | chr3.3:63894634-63894653 | MS.gene35613:intron | 45.0% | |
| TGCATGATCATCCCCTTCTA+TGG | + | chr3.3:63893879-63893898 | MS.gene35613:intron | 45.0% | |
| TGTTAGAGCCCTCTCAAATG+TGG | - | chr3.3:63894077-63894096 | None:intergenic | 45.0% | |
| TGTTGTATGTGGGTGTGGAT+TGG | - | chr3.3:63893427-63893446 | None:intergenic | 45.0% | |
| ! | AATATTGGCTACCGGGAATC+AGG | + | chr3.3:63895811-63895830 | MS.gene35613:CDS | 45.0% |
| ! | ACCACATTCTAGCGTTGAAC+AGG | - | chr3.3:63894638-63894657 | None:intergenic | 45.0% |
| ! | ATCTTTTAGCCCAGACACAG+AGG | + | chr3.3:63896045-63896064 | MS.gene35613:CDS | 45.0% |
| ! | GTGAGGAGGATTTTCGGATA+AGG | - | chr3.3:63891629-63891648 | None:intergenic | 45.0% |
| ! | GTTACGGTGAGGAGGATTTT+CGG | - | chr3.3:63891635-63891654 | None:intergenic | 45.0% |
| ! | GTTAGAACTAAAGCACCAGC+TGG | - | chr3.3:63892330-63892349 | None:intergenic | 45.0% |
| ! | TCAAGTGTTGTATGTGGGTG+TGG | - | chr3.3:63893432-63893451 | None:intergenic | 45.0% |
| ! | TGGATGTTTTCCGCAATCCT+AGG | + | chr3.3:63895253-63895272 | MS.gene35613:CDS | 45.0% |
| !! | AAGGAAAACTTGATGGTGGC+AGG | + | chr3.3:63895038-63895057 | MS.gene35613:CDS | 45.0% |
| !! | AGTCAGAATCGGAGGTGTTA+CGG | - | chr3.3:63891651-63891670 | None:intergenic | 45.0% |
| !! | GGAAAGTTGGTAGCTGTTCT+TGG | + | chr3.3:63895589-63895608 | MS.gene35613:CDS | 45.0% |
| !! | TGGAAACCTAAAAGGGCACT+TGG | + | chr3.3:63895751-63895770 | MS.gene35613:CDS | 45.0% |
| !!! | AGATGGGAAGTTTTTGGCCA+TGG | + | chr3.3:63895931-63895950 | MS.gene35613:CDS | 45.0% |
| !!! | ATTTTTTCTATATATAATTT+TGG | + | chr3.3:63892621-63892640 | MS.gene35613:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTGTTATT+AGG | + | chr3.3:63892031-63892050 | MS.gene35613:intron | 5.0% |
| AATGCTTCTGCTAGTCCGGA+TGG | + | chr3.3:63895568-63895587 | MS.gene35613:CDS | 50.0% | |
| ACAAACAGAGCCTCTGTGTC+TGG | - | chr3.3:63896058-63896077 | None:intergenic | 50.0% | |
| AGCTGATGCTAATACCGGGA+AGG | + | chr3.3:63895633-63895652 | MS.gene35613:CDS | 50.0% | |
| AGGACACAACATGCAGGTTG+TGG | + | chr3.3:63895831-63895850 | MS.gene35613:CDS | 50.0% | |
| AGGGACGAATGGGTGCAATA+AGG | + | chr3.3:63895891-63895910 | MS.gene35613:CDS | 50.0% | |
| AGGTGGAAAGTGAGCAGCTT+GGG | + | chr3.3:63894014-63894033 | MS.gene35613:intron | 50.0% | |
| ATCGTCTTCGAAGTCGGAGT+CGG | - | chr3.3:63891674-63891693 | None:intergenic | 50.0% | |
| CAAACAGAGCCTCTGTGTCT+GGG | - | chr3.3:63896057-63896076 | None:intergenic | 50.0% | |
| CAGAACCCCGAACAGATTGT+TGG | - | chr3.3:63893601-63893620 | None:intergenic | 50.0% | |
| CTCTCGTGAAGACCTTGACA+AGG | + | chr3.3:63891936-63891955 | MS.gene35613:CDS | 50.0% | |
| GACACAGAGGCTCTGTTTGT+TGG | + | chr3.3:63896058-63896077 | MS.gene35613:CDS | 50.0% | |
| GAGGCGGACCCCTTTATATA+AGG | + | chr3.3:63892699-63892718 | MS.gene35613:intron | 50.0% | |
| GCATGTTGTGTCCTGATTCC+CGG | - | chr3.3:63895825-63895844 | None:intergenic | 50.0% | |
| GGAATCAGGACACAACATGC+AGG | + | chr3.3:63895825-63895844 | MS.gene35613:CDS | 50.0% | |
| GGACACAACATGCAGGTTGT+GGG | + | chr3.3:63895832-63895851 | MS.gene35613:CDS | 50.0% | |
| GGCGGTATTAAAGGGACGAA+TGG | + | chr3.3:63895880-63895899 | MS.gene35613:CDS | 50.0% | |
| GGGACGAATGGGTGCAATAA+GGG | + | chr3.3:63895892-63895911 | MS.gene35613:CDS | 50.0% | |
| GGGAGCTTCTTTGCAAGGTA+GGG | + | chr3.3:63895072-63895091 | MS.gene35613:intron | 50.0% | |
| GGGGCCTTCATAAGTCGTTA+GGG | - | chr3.3:63895130-63895149 | None:intergenic | 50.0% | |
| TCGTCCCTTTAATACCGCCA+TGG | - | chr3.3:63895879-63895898 | None:intergenic | 50.0% | |
| TCTTTGCAGTGGGTCGTTGA+GGG | + | chr3.3:63895342-63895361 | MS.gene35613:intron | 50.0% | |
| TGCTAGTCCGGATGGAAAGT+TGG | + | chr3.3:63895576-63895595 | MS.gene35613:CDS | 50.0% | |
| TGGCAGGATGGAATTAGAGG+CGG | + | chr3.3:63892683-63892702 | MS.gene35613:intron | 50.0% | |
| TTCTTTGCAGTGGGTCGTTG+AGG | + | chr3.3:63895341-63895360 | MS.gene35613:intron | 50.0% | |
| ! | ACTAAAGCACCAGCTGGATG+TGG | - | chr3.3:63892324-63892343 | None:intergenic | 50.0% |
| ! | GTGGCTTGTCTTTGTAGCTG+AGG | + | chr3.3:63894740-63894759 | MS.gene35613:intron | 50.0% |
| ! | GTTCTTGGGGACAGTACTGA+AGG | + | chr3.3:63895604-63895623 | MS.gene35613:CDS | 50.0% |
| ! | TGATTTGCACTCGCGAGACA+GGG | - | chr3.3:63895004-63895023 | None:intergenic | 50.0% |
| !! | GAAAACTTGATGGTGGCAGG+TGG | + | chr3.3:63895041-63895060 | MS.gene35613:CDS | 50.0% |
| !! | TCGGCTTTGGAAGCACGAAA+CGG | + | chr3.3:63891811-63891830 | MS.gene35613:CDS | 50.0% |
| !! | TGTATGTGGGTGTGGATTGG+TGG | - | chr3.3:63893424-63893443 | None:intergenic | 50.0% |
| CAGGTGGAAAGTGAGCAGCT+TGG | + | chr3.3:63894013-63894032 | MS.gene35613:intron | 55.0% | |
| CCATGGGGAGCTTCTTTGCA+AGG | + | chr3.3:63895067-63895086 | MS.gene35613:CDS | 55.0% | |
| CCTTGCAAAGAAGCTCCCCA+TGG | - | chr3.3:63895070-63895089 | None:intergenic | 55.0% | |
| GCGAGTGCAAATCAGCACCA+TGG | + | chr3.3:63895010-63895029 | MS.gene35613:CDS | 55.0% | |
| GCGGAAAACATCCACTGCGT+TGG | - | chr3.3:63895247-63895266 | None:intergenic | 55.0% | |
| GGGGAGCTTCTTTGCAAGGT+AGG | + | chr3.3:63895071-63895090 | MS.gene35613:intron | 55.0% | |
| GGGGGCCTTCATAAGTCGTT+AGG | - | chr3.3:63895131-63895150 | None:intergenic | 55.0% | |
| GTCGGAGTCGGAGTCAGAAT+CGG | - | chr3.3:63891662-63891681 | None:intergenic | 55.0% | |
| TCATCTGCTTGGCACCCCAA+TGG | + | chr3.3:63895785-63895804 | MS.gene35613:CDS | 55.0% | |
| TTGGTGCACGTGGAAGAACG+AGG | - | chr3.3:63892829-63892848 | None:intergenic | 55.0% | |
| ! | AGAGGCTCTGTTTGTTGGCG+TGG | + | chr3.3:63896063-63896082 | MS.gene35613:CDS | 55.0% |
| ! | CTGATTTGCACTCGCGAGAC+AGG | - | chr3.3:63895005-63895024 | None:intergenic | 55.0% |
| !! | AAAGTCTGCTGGCTCAGCCA+TGG | - | chr3.3:63895951-63895970 | None:intergenic | 55.0% |
| !! | CGGCTTTGGAAGCACGAAAC+GGG | + | chr3.3:63891812-63891831 | MS.gene35613:CDS | 55.0% |
| !! | GAATCGGAGGTGTTACGGTG+AGG | - | chr3.3:63891646-63891665 | None:intergenic | 55.0% |
| ATGGTGGCAGGTGGCTTCCA+TGG | + | chr3.3:63895050-63895069 | MS.gene35613:CDS | 60.0% | |
| GGAGTCGGAGTCAGAATCGG+AGG | - | chr3.3:63891659-63891678 | None:intergenic | 60.0% | |
| TGGTGGCAGGTGGCTTCCAT+GGG | + | chr3.3:63895051-63895070 | MS.gene35613:CDS | 60.0% | |
| TTGCACTCGCGAGACAGGGT+GGG | - | chr3.3:63895000-63895019 | None:intergenic | 60.0% | |
| TTTGCACTCGCGAGACAGGG+TGG | - | chr3.3:63895001-63895020 | None:intergenic | 60.0% | |
| !! | TCGGAGGTGTTACGGTGAGG+AGG | - | chr3.3:63891643-63891662 | None:intergenic | 60.0% |
| GGCGTGGCTGACCGAACCTA+CGG | + | chr3.3:63896079-63896098 | MS.gene35613:CDS | 65.0% | |
| GGTGGCAGGTGGCTTCCATG+GGG | + | chr3.3:63895052-63895071 | MS.gene35613:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 63891532 | 63896159 | 63891532 | ID=MS.gene35613 |
| chr3.3 | mRNA | 63891532 | 63896159 | 63891532 | ID=MS.gene35613.t1;Parent=MS.gene35613 |
| chr3.3 | exon | 63891532 | 63891702 | 63891532 | ID=MS.gene35613.t1.exon1;Parent=MS.gene35613.t1 |
| chr3.3 | CDS | 63891532 | 63891702 | 63891532 | ID=cds.MS.gene35613.t1;Parent=MS.gene35613.t1 |
| chr3.3 | exon | 63891790 | 63891957 | 63891790 | ID=MS.gene35613.t1.exon2;Parent=MS.gene35613.t1 |
| chr3.3 | CDS | 63891790 | 63891957 | 63891790 | ID=cds.MS.gene35613.t1;Parent=MS.gene35613.t1 |
| chr3.3 | exon | 63892053 | 63892139 | 63892053 | ID=MS.gene35613.t1.exon3;Parent=MS.gene35613.t1 |
| chr3.3 | CDS | 63892053 | 63892139 | 63892053 | ID=cds.MS.gene35613.t1;Parent=MS.gene35613.t1 |
| chr3.3 | exon | 63894757 | 63894891 | 63894757 | ID=MS.gene35613.t1.exon4;Parent=MS.gene35613.t1 |
| chr3.3 | CDS | 63894757 | 63894891 | 63894757 | ID=cds.MS.gene35613.t1;Parent=MS.gene35613.t1 |
| chr3.3 | exon | 63894978 | 63895088 | 63894978 | ID=MS.gene35613.t1.exon5;Parent=MS.gene35613.t1 |
| chr3.3 | CDS | 63894978 | 63895088 | 63894978 | ID=cds.MS.gene35613.t1;Parent=MS.gene35613.t1 |
| chr3.3 | exon | 63895183 | 63895274 | 63895183 | ID=MS.gene35613.t1.exon6;Parent=MS.gene35613.t1 |
| chr3.3 | CDS | 63895183 | 63895274 | 63895183 | ID=cds.MS.gene35613.t1;Parent=MS.gene35613.t1 |
| chr3.3 | exon | 63895351 | 63895456 | 63895351 | ID=MS.gene35613.t1.exon7;Parent=MS.gene35613.t1 |
| chr3.3 | CDS | 63895351 | 63895456 | 63895351 | ID=cds.MS.gene35613.t1;Parent=MS.gene35613.t1 |
| chr3.3 | exon | 63895568 | 63895654 | 63895568 | ID=MS.gene35613.t1.exon8;Parent=MS.gene35613.t1 |
| chr3.3 | CDS | 63895568 | 63895654 | 63895568 | ID=cds.MS.gene35613.t1;Parent=MS.gene35613.t1 |
| chr3.3 | exon | 63895746 | 63896159 | 63895746 | ID=MS.gene35613.t1.exon9;Parent=MS.gene35613.t1 |
| chr3.3 | CDS | 63895746 | 63896159 | 63895746 | ID=cds.MS.gene35613.t1;Parent=MS.gene35613.t1 |
| Gene Sequence |
| Protein sequence |
