Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52355.t1 | XP_013460861.1 | 94.7 | 457 | 22 | 1 | 1 | 455 | 1 | 457 | 2.80E-240 | 840.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52355.t1 | Q9Y7K5 | 29.3 | 389 | 251 | 8 | 58 | 444 | 50 | 416 | 3.8e-36 | 154.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52355.t1 | G8A379 | 94.7 | 457 | 22 | 1 | 1 | 455 | 1 | 457 | 2.0e-240 | 840.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52355 | MS.gene050456 | PPI |
| MS.gene52355 | MS.gene56285 | PPI |
| MS.gene52355 | MS.gene024753 | PPI |
| MS.gene52355 | MS.gene027074 | PPI |
| MS.gene52355 | MS.gene92674 | PPI |
| MS.gene52355 | MS.gene21888 | PPI |
| MS.gene52355 | MS.gene91851 | PPI |
| MS.gene52355 | MS.gene46611 | PPI |
| MS.gene52355 | MS.gene98540 | PPI |
| MS.gene52355 | MS.gene30176 | PPI |
| MS.gene77885 | MS.gene52355 | PPI |
| MS.gene90626 | MS.gene52355 | PPI |
| MS.gene52355 | MS.gene21734 | PPI |
| MS.gene52355 | MS.gene30177 | PPI |
| MS.gene52355 | MS.gene82740 | PPI |
| MS.gene52355 | MS.gene027073 | PPI |
| MS.gene52355 | MS.gene027072 | PPI |
| MS.gene30172 | MS.gene52355 | PPI |
| MS.gene52355 | MS.gene29768 | PPI |
| MS.gene027071 | MS.gene52355 | PPI |
| MS.gene52355 | MS.gene63539 | PPI |
| MS.gene52355 | MS.gene027075 | PPI |
| MS.gene52355 | MS.gene050457 | PPI |
| MS.gene52355 | MS.gene30174 | PPI |
| MS.gene51650 | MS.gene52355 | PPI |
| MS.gene81658 | MS.gene52355 | PPI |
| MS.gene52355 | MS.gene81663 | PPI |
| MS.gene52355 | MS.gene009485 | PPI |
| MS.gene52355 | MS.gene058128 | PPI |
| MS.gene52355 | MS.gene81660 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52355.t1 | MTR_3g074070 | 90.103 | 485 | 18 | 2 | 1 | 455 | 1 | 485 | 0.0 | 895 |
| MS.gene52355.t1 | MTR_3g074070 | 94.530 | 457 | 23 | 1 | 1 | 455 | 1 | 457 | 0.0 | 891 |
| MS.gene52355.t1 | MTR_3g074070 | 94.323 | 458 | 23 | 2 | 1 | 455 | 1 | 458 | 0.0 | 887 |
| MS.gene52355.t1 | MTR_3g074070 | 96.835 | 316 | 10 | 0 | 140 | 455 | 28 | 343 | 0.0 | 642 |
| MS.gene52355.t1 | MTR_3g074070 | 97.315 | 298 | 8 | 0 | 158 | 455 | 1 | 298 | 0.0 | 608 |
| MS.gene52355.t1 | MTR_2g028050 | 58.690 | 397 | 163 | 1 | 59 | 454 | 51 | 447 | 8.67e-179 | 508 |
| MS.gene52355.t1 | MTR_3g010010 | 55.023 | 438 | 192 | 4 | 19 | 455 | 14 | 447 | 8.96e-179 | 508 |
| MS.gene52355.t1 | MTR_3g010010 | 55.023 | 438 | 192 | 4 | 19 | 455 | 56 | 489 | 8.24e-178 | 506 |
| MS.gene52355.t1 | MTR_7g022190 | 55.112 | 401 | 179 | 1 | 53 | 452 | 37 | 437 | 2.58e-168 | 481 |
| MS.gene52355.t1 | MTR_3g010110 | 47.809 | 251 | 109 | 3 | 63 | 312 | 54 | 283 | 5.86e-79 | 247 |
| MS.gene52355.t1 | MTR_4g088640 | 25.773 | 194 | 134 | 3 | 253 | 441 | 70 | 258 | 7.52e-13 | 70.1 |
| MS.gene52355.t1 | MTR_3g106080 | 22.000 | 300 | 187 | 5 | 182 | 435 | 312 | 610 | 8.45e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52355.t1 | AT1G78070 | 69.604 | 454 | 128 | 4 | 1 | 452 | 1 | 446 | 0.0 | 642 |
| MS.gene52355.t1 | AT1G36070 | 71.638 | 409 | 112 | 3 | 48 | 452 | 7 | 415 | 0.0 | 615 |
| MS.gene52355.t1 | AT1G36070 | 71.638 | 409 | 111 | 4 | 48 | 452 | 7 | 414 | 0.0 | 610 |
| MS.gene52355.t1 | AT1G36070 | 71.788 | 397 | 108 | 3 | 60 | 452 | 1 | 397 | 0.0 | 600 |
| MS.gene52355.t1 | AT5G56190 | 57.238 | 449 | 180 | 5 | 11 | 455 | 1 | 441 | 0.0 | 535 |
| MS.gene52355.t1 | AT5G56190 | 57.238 | 449 | 180 | 5 | 11 | 455 | 1 | 441 | 0.0 | 535 |
| MS.gene52355.t1 | AT5G56190 | 56.893 | 457 | 185 | 5 | 1 | 455 | 1 | 447 | 0.0 | 534 |
| MS.gene52355.t1 | AT5G56190 | 56.893 | 457 | 185 | 5 | 1 | 455 | 1 | 447 | 0.0 | 534 |
| MS.gene52355.t1 | AT5G56190 | 56.893 | 457 | 185 | 5 | 1 | 455 | 1 | 447 | 0.0 | 534 |
| MS.gene52355.t1 | AT5G56190 | 56.893 | 457 | 185 | 5 | 1 | 455 | 1 | 447 | 0.0 | 534 |
| MS.gene52355.t1 | AT5G56190 | 57.111 | 450 | 181 | 5 | 10 | 455 | 21 | 462 | 0.0 | 534 |
| MS.gene52355.t1 | AT3G13340 | 60.784 | 408 | 157 | 3 | 47 | 452 | 38 | 444 | 0.0 | 521 |
| MS.gene52355.t1 | AT3G13340 | 60.784 | 408 | 157 | 3 | 47 | 452 | 38 | 444 | 0.0 | 521 |
| MS.gene52355.t1 | AT3G13340 | 60.784 | 408 | 157 | 3 | 47 | 452 | 38 | 444 | 0.0 | 521 |
| MS.gene52355.t1 | AT1G55680 | 58.578 | 408 | 166 | 3 | 47 | 452 | 36 | 442 | 3.31e-180 | 511 |
| MS.gene52355.t1 | AT1G78070 | 73.802 | 313 | 81 | 1 | 141 | 452 | 25 | 337 | 2.23e-174 | 492 |
| MS.gene52355.t1 | AT1G78070 | 73.718 | 312 | 81 | 1 | 142 | 452 | 25 | 336 | 9.51e-174 | 491 |
| MS.gene52355.t1 | AT1G36070 | 71.622 | 296 | 83 | 1 | 158 | 452 | 1 | 296 | 2.90e-160 | 455 |
| MS.gene52355.t1 | AT1G36070 | 71.622 | 296 | 83 | 1 | 158 | 452 | 1 | 296 | 2.90e-160 | 455 |
| MS.gene52355.t1 | AT5G08390 | 30.137 | 146 | 90 | 2 | 301 | 435 | 64 | 208 | 1.26e-11 | 67.4 |
| MS.gene52355.t1 | AT5G23430 | 30.282 | 142 | 96 | 2 | 296 | 435 | 68 | 208 | 1.27e-11 | 67.4 |
| MS.gene52355.t1 | AT5G23430 | 30.282 | 142 | 96 | 2 | 296 | 435 | 68 | 208 | 1.29e-11 | 67.4 |
| MS.gene52355.t1 | AT5G23430 | 30.282 | 142 | 96 | 2 | 296 | 435 | 68 | 208 | 1.29e-11 | 67.4 |
| MS.gene52355.t1 | AT3G49660 | 24.832 | 149 | 110 | 2 | 288 | 435 | 74 | 221 | 4.97e-11 | 64.3 |
| MS.gene52355.t1 | AT5G25150 | 24.865 | 185 | 136 | 3 | 252 | 435 | 427 | 609 | 6.14e-11 | 65.1 |
| MS.gene52355.t1 | AT5G25150 | 24.865 | 185 | 136 | 3 | 252 | 435 | 427 | 609 | 7.73e-11 | 64.7 |
Find 112 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCAGAATTTGAATCATTC+TGG | 0.246242 | 3.1:+60628823 | MS.gene52355:intron |
| AGAGTCCATGGCGGTATTAA+AGG | 0.283802 | 3.1:+60629517 | MS.gene52355:CDS |
| CGAGATCGACGTTGTTGAAT+TGG | 0.312959 | 3.1:-60625191 | None:intergenic |
| CGGTATTAGCATCAGCTATC+AGG | 0.320426 | 3.1:-60629273 | None:intergenic |
| CAGGTCACTGGAAACCTAAA+AGG | 0.322712 | 3.1:+60629389 | MS.gene52355:intron |
| ACAAACAGAGCCTCTGTGTC+TGG | 0.330238 | 3.1:-60629701 | None:intergenic |
| AGTCAAGAGATAGATATATT+TGG | 0.331017 | 3.1:+60629653 | MS.gene52355:CDS |
| GGAAAGTTGGTAGCTGTTCT+TGG | 0.334078 | 3.1:+60629235 | MS.gene52355:CDS |
| TGGGTTGTTTCAAGTATGAT+TGG | 0.343249 | 3.1:+60629071 | MS.gene52355:CDS |
| GATATATTTGGTGAAATTGC+TGG | 0.349480 | 3.1:+60629665 | MS.gene52355:CDS |
| AAAACATTGTTATCAGTATC+TGG | 0.350725 | 3.1:+60629769 | MS.gene52355:CDS |
| GCACCCCAATGGACAAATAT+TGG | 0.353641 | 3.1:+60629442 | MS.gene52355:CDS |
| TTGTTCATCGTCTTCGAAAT+CGG | 0.355336 | 3.1:-60625253 | None:intergenic |
| ATGGTGGCAGGTGGCTTCCA+TGG | 0.362264 | 3.1:+60628696 | MS.gene52355:CDS |
| AATCAGCACCATGGCTGTTA+AGG | 0.369015 | 3.1:+60628665 | MS.gene52355:CDS |
| CGTACAAGGGTTGGAATAAC+CGG | 0.371193 | 3.1:-60628520 | None:intergenic |
| GAAAGTTGGTAGCTGTTCTT+GGG | 0.375612 | 3.1:+60629236 | MS.gene52355:CDS |
| GGGACGAATGGGTGCAATAA+GGG | 0.380199 | 3.1:+60629538 | MS.gene52355:CDS |
| GTAGCCAATATTTGTCCATT+GGG | 0.381858 | 3.1:-60629446 | None:intergenic |
| CTGATTTGCACTCGCGAGAC+AGG | 0.384707 | 3.1:-60628648 | None:intergenic |
| CAAATAATGATTCCCAAGTT+CGG | 0.389538 | 3.1:+60629020 | MS.gene52355:CDS |
| AGGGACGAATGGGTGCAATA+AGG | 0.392663 | 3.1:+60629537 | MS.gene52355:CDS |
| TTTAGATTAAACTACCTTCC+CGG | 0.402476 | 3.1:-60629293 | None:intergenic |
| AATATTGGCTACCGGGAATC+AGG | 0.406373 | 3.1:+60629457 | MS.gene52355:CDS |
| GCATGTTGTGTCCTGATTCC+CGG | 0.406593 | 3.1:-60629468 | None:intergenic |
| AAATAATGATTCCCAAGTTC+GGG | 0.412328 | 3.1:+60629021 | MS.gene52355:CDS |
| TGGTGGCAGGTGGCTTCCAT+GGG | 0.412500 | 3.1:+60628697 | MS.gene52355:CDS |
| GAAGACTGATACTTCAGCTT+TGG | 0.414979 | 3.1:+60625445 | MS.gene52355:CDS |
| ATTATTCTTTCTCATCTGCT+TGG | 0.426332 | 3.1:+60629420 | MS.gene52355:CDS |
| TCTTTGCAGTGGGTCGTTGA+GGG | 0.434362 | 3.1:+60628988 | MS.gene52355:intron |
| TTGGTCCTCATTACTACAAA+GGG | 0.446991 | 3.1:+60628471 | MS.gene52355:CDS |
| ATAGAATGCTTCTGCTAGTC+CGG | 0.447571 | 3.1:+60629210 | MS.gene52355:intron |
| TTCTGACTCCGACTCCGACT+TGG | 0.448555 | 3.1:+60625317 | MS.gene52355:CDS |
| AGTCAGAATCGGAGGTGTTA+CGG | 0.449444 | 3.1:-60625302 | None:intergenic |
| GACACAGAGGCTCTGTTTGT+TGG | 0.450985 | 3.1:+60629704 | MS.gene52355:CDS |
| TTCTTTGCAGTGGGTCGTTG+AGG | 0.452454 | 3.1:+60628987 | MS.gene52355:intron |
| AGTGCTTAATGTGGCAAAAC+CGG | 0.460527 | 3.1:+60628501 | MS.gene52355:CDS |
| GGTAGCCAATATTTGTCCAT+TGG | 0.464135 | 3.1:-60629447 | None:intergenic |
| CAGCTTTGGAAGCACGAAAC+GGG | 0.464386 | 3.1:+60625459 | MS.gene52355:CDS |
| GCCTTAAAATTCACATCAGA+TGG | 0.465387 | 3.1:+60629560 | MS.gene52355:CDS |
| TTATTAGGAATGCTTGGAAG+TGG | 0.473594 | 3.1:+60625692 | MS.gene52355:intron |
| GAGTCCATGGCGGTATTAAA+GGG | 0.475701 | 3.1:+60629518 | MS.gene52355:CDS |
| CTGATAGCTGATGCTAATAC+CGG | 0.476936 | 3.1:+60629274 | MS.gene52355:CDS |
| TTTACCCCTTTGTAGTAATG+AGG | 0.482246 | 3.1:-60628476 | None:intergenic |
| GGCTGTTAAGGAAAACTTGA+TGG | 0.496023 | 3.1:+60628677 | MS.gene52355:CDS |
| TGTAGCTGAGGAATCTATTG+TGG | 0.498079 | 3.1:+60628398 | MS.gene52355:intron |
| AGGACACAACATGCAGGTTG+TGG | 0.498713 | 3.1:+60629477 | MS.gene52355:CDS |
| AAGATATTCAAGGAATTCCA+TGG | 0.500603 | 3.1:+60625483 | MS.gene52355:CDS |
| GGCGGTATTAAAGGGACGAA+TGG | 0.503870 | 3.1:+60629526 | MS.gene52355:CDS |
| CCATGGGGAGCTTCTTTGCA+AGG | 0.506745 | 3.1:+60628713 | MS.gene52355:CDS |
| TATGGTATCTCTCAGGTCAC+TGG | 0.507467 | 3.1:+60629377 | MS.gene52355:intron |
| GTAGCTGAGGAATCTATTGT+GGG | 0.509031 | 3.1:+60628399 | MS.gene52355:intron |
| GTCGGAGTCGGAGTCAGAAT+CGG | 0.516418 | 3.1:-60625313 | None:intergenic |
| TGCTAGTCCGGATGGAAAGT+TGG | 0.528223 | 3.1:+60629222 | MS.gene52355:CDS |
| AATTGTTGATTTGATAAGCC+TGG | 0.529271 | 3.1:-60625751 | None:intergenic |
| TCATCTGCTTGGCACCCCAA+TGG | 0.530821 | 3.1:+60629431 | MS.gene52355:CDS |
| TCAGCTTTGGAAGCACGAAA+CGG | 0.530955 | 3.1:+60625458 | MS.gene52355:CDS |
| GGACACAACATGCAGGTTGT+GGG | 0.534397 | 3.1:+60629478 | MS.gene52355:CDS |
| AGAGGCTCTGTTTGTTGGCG+TGG | 0.535275 | 3.1:+60629709 | MS.gene52355:CDS |
| GCGGTATTAAAGGGACGAAT+GGG | 0.538171 | 3.1:+60629527 | MS.gene52355:CDS |
| AAAATATGGACAAAGTCTGC+TGG | 0.538625 | 3.1:-60629605 | None:intergenic |
| ATCGTCTTCCAAGTCGGAGT+CGG | 0.540704 | 3.1:-60625325 | None:intergenic |
| CTAACAAGCTACCGTAGGTT+CGG | 0.542132 | 3.1:-60629736 | None:intergenic |
| GAATGCTTGGAAGTGGAGAA+AGG | 0.547263 | 3.1:+60625699 | MS.gene52355:CDS |
| AGGTCACTGGAAACCTAAAA+GGG | 0.548717 | 3.1:+60629390 | MS.gene52355:intron |
| TTCGAAATCGTCTTCCAAGT+CGG | 0.551624 | 3.1:-60625331 | None:intergenic |
| AATGGACAAATATTGGCTAC+CGG | 0.554682 | 3.1:+60629449 | MS.gene52355:CDS |
| GCGGAAAACATCCACTGCGT+TGG | 0.554722 | 3.1:-60628890 | None:intergenic |
| ACAGCTACCAACTTTCCATC+CGG | 0.555176 | 3.1:-60629229 | None:intergenic |
| TGGAAACCTAAAAGGGCACT+TGG | 0.558556 | 3.1:+60629397 | MS.gene52355:CDS |
| AAGAAATCTTTCAGAGTCCA+TGG | 0.559079 | 3.1:+60629505 | MS.gene52355:CDS |
| AAAGTCTGCTGGCTCAGCCA+TGG | 0.560344 | 3.1:-60629594 | None:intergenic |
| GGCGTGGCTGACCGAACCTA+CGG | 0.565701 | 3.1:+60629725 | MS.gene52355:CDS |
| AAGTAGCTACGTACAAGGGT+TGG | 0.572809 | 3.1:-60628529 | None:intergenic |
| AAGGAAAACTTGATGGTGGC+AGG | 0.574431 | 3.1:+60628684 | MS.gene52355:CDS |
| AAAACTACTCTGTGATGCAT+TGG | 0.575459 | 3.1:+60628452 | MS.gene52355:CDS |
| CGAAACGGGAAAGATATTCA+AGG | 0.575551 | 3.1:+60625473 | MS.gene52355:CDS |
| CAAACAGAGCCTCTGTGTCT+GGG | 0.578526 | 3.1:-60629700 | None:intergenic |
| AATGCTTCTGCTAGTCCGGA+TGG | 0.579771 | 3.1:+60629214 | MS.gene52355:CDS |
| GTTCTTGGGGACAGTACTGA+AGG | 0.589102 | 3.1:+60629250 | MS.gene52355:CDS |
| TTTGCACTCGCGAGACAGGG+TGG | 0.592559 | 3.1:-60628644 | None:intergenic |
| CTTGGAAGACGATTTCGAAA+CGG | 0.593406 | 3.1:+60625335 | MS.gene52355:CDS |
| CTATAATTAAGCTTCTCCCA+TGG | 0.593787 | 3.1:-60625500 | None:intergenic |
| TAGATGCTTACCTAGGATTG+CGG | 0.596184 | 3.1:-60628909 | None:intergenic |
| TGATTTGCACTCGCGAGACA+GGG | 0.598123 | 3.1:-60628647 | None:intergenic |
| AAAAGAAATTAACCTTGTCA+AGG | 0.602823 | 3.1:-60625595 | None:intergenic |
| GGAATCAGGACACAACATGC+AGG | 0.603356 | 3.1:+60629471 | MS.gene52355:CDS |
| TCGTCCCTTTAATACCGCCA+TGG | 0.605666 | 3.1:-60629522 | None:intergenic |
| GTACTTTAGCAGAAGCATTG+TGG | 0.611191 | 3.1:+60628615 | MS.gene52355:intron |
| ATTGGTCCTCATTACTACAA+AGG | 0.613083 | 3.1:+60628470 | MS.gene52355:CDS |
| TCGGAGGTGTTACGGTGAGG+AGG | 0.616059 | 3.1:-60625294 | None:intergenic |
| GGTGGCAGGTGGCTTCCATG+GGG | 0.618672 | 3.1:+60628698 | MS.gene52355:CDS |
| TTGCACTCGCGAGACAGGGT+GGG | 0.623685 | 3.1:-60628643 | None:intergenic |
| AGATATTCAAGGAATTCCAT+GGG | 0.623721 | 3.1:+60625484 | MS.gene52355:CDS |
| ATGGACAAATATTGGCTACC+GGG | 0.626683 | 3.1:+60629450 | MS.gene52355:CDS |
| AGCTGATGCTAATACCGGGA+AGG | 0.627809 | 3.1:+60629279 | MS.gene52355:CDS |
| TAGCCAATATTTGTCCATTG+GGG | 0.631857 | 3.1:-60629445 | None:intergenic |
| CCTTGCAAAGAAGCTCCCCA+TGG | 0.634860 | 3.1:-60628713 | None:intergenic |
| CCTTAAAATTCACATCAGAT+GGG | 0.638694 | 3.1:+60629561 | MS.gene52355:CDS |
| TGATAGCTGATGCTAATACC+GGG | 0.645103 | 3.1:+60629275 | MS.gene52355:CDS |
| CTCTCGTGAAGACCTTGACA+AGG | 0.646657 | 3.1:+60625583 | MS.gene52355:CDS |
| GAAAACTTGATGGTGGCAGG+TGG | 0.651921 | 3.1:+60628687 | MS.gene52355:CDS |
| GGAGTCGGAGTCAGAATCGG+AGG | 0.657638 | 3.1:-60625310 | None:intergenic |
| GAACTCTAACAAGCTACCGT+AGG | 0.660581 | 3.1:-60629741 | None:intergenic |
| GGGTAAAGAAGTGCTTAATG+TGG | 0.669266 | 3.1:+60628492 | MS.gene52355:CDS |
| AAAGTTGGTAGCTGTTCTTG+GGG | 0.679274 | 3.1:+60629237 | MS.gene52355:CDS |
| GAATCGGAGGTGTTACGGTG+AGG | 0.688099 | 3.1:-60625297 | None:intergenic |
| TAGTGCTATAACCAACGCAG+TGG | 0.693836 | 3.1:+60628879 | MS.gene52355:CDS |
| GCGAGTGCAAATCAGCACCA+TGG | 0.713411 | 3.1:+60628656 | MS.gene52355:CDS |
| TGGTCCTCATTACTACAAAG+GGG | 0.724620 | 3.1:+60628472 | MS.gene52355:CDS |
| TGTTAAGGAAAACTTGATGG+TGG | 0.731187 | 3.1:+60628680 | MS.gene52355:CDS |
| AAATCTTTCAGAGTCCATGG+CGG | 0.791786 | 3.1:+60629508 | MS.gene52355:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGTTTATATCAATTAAA+AGG | - | chr3.1:60627567-60627586 | None:intergenic | 10.0% |
| !! | TATATATAGAAAAAATTGTT+TGG | - | chr3.1:60626263-60626282 | None:intergenic | 10.0% |
| !! | TTCTGATTATATATAATTTA+TGG | + | chr3.1:60629359-60629378 | MS.gene52355:intron | 10.0% |
| !! | AGAATTTAAATGAAACAATA+AGG | - | chr3.1:60629343-60629362 | None:intergenic | 15.0% |
| !! | TACATAAATATTTACATGAA+AGG | - | chr3.1:60626637-60626656 | None:intergenic | 15.0% |
| !! | TGGATTTACTTATAAAATTA+AGG | - | chr3.1:60626775-60626794 | None:intergenic | 15.0% |
| !! | TTATATTGAATGTAAGAAAA+AGG | - | chr3.1:60627030-60627049 | None:intergenic | 15.0% |
| !!! | AAAAATCAAAAGTGTTAAAA+AGG | - | chr3.1:60628798-60628817 | None:intergenic | 15.0% |
| !!! | AAAATCAAAAGTGTTAAAAA+GGG | - | chr3.1:60628797-60628816 | None:intergenic | 15.0% |
| !!! | ATAAGTAAATCCATTTTTTT+GGG | + | chr3.1:60626782-60626801 | MS.gene52355:intron | 15.0% |
| !!! | TATAAGTAAATCCATTTTTT+TGG | + | chr3.1:60626781-60626800 | MS.gene52355:intron | 15.0% |
| !!! | TTAATCTAAAGATGTTTTTT+AGG | + | chr3.1:60629306-60629325 | MS.gene52355:intron | 15.0% |
| !! | AACAACTTATTAAAGTTTGA+GGG | + | chr3.1:60626416-60626435 | MS.gene52355:intron | 20.0% |
| !! | ACTCAAATTCTTTCTTAAAA+CGG | + | chr3.1:60626845-60626864 | MS.gene52355:intron | 20.0% |
| !! | AGTTAAATAAGATGAAATTG+AGG | - | chr3.1:60628587-60628606 | None:intergenic | 20.0% |
| !! | ATCTAAATGAAGCATATATT+TGG | + | chr3.1:60628927-60628946 | MS.gene52355:intron | 20.0% |
| !! | CTTTAAATCCTTATATAAAG+GGG | - | chr3.1:60626356-60626375 | None:intergenic | 20.0% |
| !! | TAACAACTTATTAAAGTTTG+AGG | + | chr3.1:60626415-60626434 | MS.gene52355:intron | 20.0% |
| !! | TAGAAATGAGAAAGAATATA+TGG | - | chr3.1:60626906-60626925 | None:intergenic | 20.0% |
| !! | TATAATCATCATAAAGAACT+TGG | + | chr3.1:60627997-60628016 | MS.gene52355:intron | 20.0% |
| !! | TCATGTAAATATTTATGTAC+TGG | + | chr3.1:60626638-60626657 | MS.gene52355:intron | 20.0% |
| !! | TGTTTATATCAATTAAAAGG+AGG | - | chr3.1:60627564-60627583 | None:intergenic | 20.0% |
| !!! | AAATCAAAAGTGTTAAAAAG+GGG | - | chr3.1:60628796-60628815 | None:intergenic | 20.0% |
| !!! | ATTTTGTTGCTATATTCATT+TGG | + | chr3.1:60625801-60625820 | MS.gene52355:intron | 20.0% |
| !!! | GCTTTAAATCCTTATATAAA+GGG | - | chr3.1:60626357-60626376 | None:intergenic | 20.0% |
| !!! | GTTAATTTCTTTTTTTACTG+TGG | + | chr3.1:60625605-60625624 | MS.gene52355:intron | 20.0% |
| !!! | TATGTAACCCATATATTTTT+TGG | + | chr3.1:60626309-60626328 | MS.gene52355:intron | 20.0% |
| !!! | TGCTTTAAATCCTTATATAA+AGG | - | chr3.1:60626358-60626377 | None:intergenic | 20.0% |
| !!! | TTCACTATTTTCGTTTATTT+AGG | + | chr3.1:60625367-60625386 | MS.gene52355:intron | 20.0% |
| !!! | TTTTTTGTATATGAATTCCT+TGG | + | chr3.1:60627969-60627988 | MS.gene52355:intron | 20.0% |
| ! | AAAACATTGTTATCAGTATC+TGG | + | chr3.1:60629769-60629788 | MS.gene52355:CDS | 25.0% |
| ! | AAAAGAAATTAACCTTGTCA+AGG | - | chr3.1:60625598-60625617 | None:intergenic | 25.0% |
| ! | AAACGAAAATAGTGAAGAAA+CGG | - | chr3.1:60625363-60625382 | None:intergenic | 25.0% |
| ! | ACAACTTATTAAAGTTTGAG+GGG | + | chr3.1:60626417-60626436 | MS.gene52355:intron | 25.0% |
| ! | AGAATTTGAGTATACAAGAT+AGG | - | chr3.1:60626836-60626855 | None:intergenic | 25.0% |
| ! | AGTCAAGAGATAGATATATT+TGG | + | chr3.1:60629653-60629672 | MS.gene52355:CDS | 25.0% |
| ! | ATGATCATATATTTCTCCTT+GGG | + | chr3.1:60628341-60628360 | MS.gene52355:intron | 25.0% |
| ! | ATGATGATTATAGTATACCA+AGG | - | chr3.1:60627989-60628008 | None:intergenic | 25.0% |
| ! | ATTAACAGTTACAGTTATAG+TGG | - | chr3.1:60627434-60627453 | None:intergenic | 25.0% |
| ! | CAGAATGTGAATCAAAAATA+TGG | - | chr3.1:60629622-60629641 | None:intergenic | 25.0% |
| ! | TAATATTGATGTTATCAACG+TGG | + | chr3.1:60628367-60628386 | MS.gene52355:intron | 25.0% |
| ! | TATAATTTATGGTATCTCTC+AGG | + | chr3.1:60629370-60629389 | MS.gene52355:intron | 25.0% |
| ! | TATGATCATATATTTCTCCT+TGG | + | chr3.1:60628340-60628359 | MS.gene52355:intron | 25.0% |
| ! | TCTTACTTTGAATTTCTGTT+TGG | + | chr3.1:60627889-60627908 | MS.gene52355:intron | 25.0% |
| ! | TTCAAAAGAATTATCTCCAA+TGG | + | chr3.1:60626877-60626896 | MS.gene52355:intron | 25.0% |
| !! | AAGAACTTGGTATAATTTGT+TGG | + | chr3.1:60628010-60628029 | MS.gene52355:intron | 25.0% |
| !! | ATACTGATAACAATGTTTTC+TGG | - | chr3.1:60629768-60629787 | None:intergenic | 25.0% |
| !! | ATGATTTTCAGTTTAATACC+AGG | + | chr3.1:60625733-60625752 | MS.gene52355:CDS | 25.0% |
| !! | CTTCACTTAAAATTCACTTT+TGG | + | chr3.1:60626564-60626583 | MS.gene52355:intron | 25.0% |
| !! | TGTATTGATACCAATACTTT+AGG | + | chr3.1:60627165-60627184 | MS.gene52355:intron | 25.0% |
| !!! | AAGTTTTGTCCAATTTCTAT+TGG | - | chr3.1:60626494-60626513 | None:intergenic | 25.0% |
| !!! | AATCAAAAGTGTTAAAAAGG+GGG | - | chr3.1:60628795-60628814 | None:intergenic | 25.0% |
| !!! | AGAAAGTTATAGGCTTTTTT+TGG | + | chr3.1:60626101-60626120 | MS.gene52355:intron | 25.0% |
| !!! | CATATTTTTGATTCACATTC+TGG | + | chr3.1:60629620-60629639 | MS.gene52355:CDS | 25.0% |
| !!! | GCATATATTTGGAATTTTTG+TGG | + | chr3.1:60628938-60628957 | MS.gene52355:intron | 25.0% |
| !!! | TTTTTGTTATTAGGAATGCT+TGG | + | chr3.1:60625686-60625705 | MS.gene52355:intron | 25.0% |
| AAAATAAGTAGCTACGTACA+AGG | - | chr3.1:60628537-60628556 | None:intergenic | 30.0% | |
| AAAGAATATATGGTGTCCAT+TGG | - | chr3.1:60626896-60626915 | None:intergenic | 30.0% | |
| AAATAAGTAGCTACGTACAA+GGG | - | chr3.1:60628536-60628555 | None:intergenic | 30.0% | |
| AAATAATGATTCCCAAGTTC+GGG | + | chr3.1:60629021-60629040 | MS.gene52355:CDS | 30.0% | |
| AACATCAATATTAACACCCA+AGG | - | chr3.1:60628360-60628379 | None:intergenic | 30.0% | |
| AAGATATTCAAGGAATTCCA+TGG | + | chr3.1:60625483-60625502 | MS.gene52355:CDS | 30.0% | |
| AAGCTATCTTATAGAGTGTA+TGG | - | chr3.1:60626129-60626148 | None:intergenic | 30.0% | |
| AAGCTTGTATGAGAACAATT+TGG | + | chr3.1:60626162-60626181 | MS.gene52355:intron | 30.0% | |
| ACCTAAGTTTATGGTATGAT+AGG | + | chr3.1:60627686-60627705 | MS.gene52355:intron | 30.0% | |
| ACGAATACATAAACCATAGA+AGG | - | chr3.1:60627541-60627560 | None:intergenic | 30.0% | |
| ACTTATGCAAAGCTCATATT+TGG | + | chr3.1:60626665-60626684 | MS.gene52355:intron | 30.0% | |
| AGAGTATGTCACTAAAAAGT+TGG | + | chr3.1:60627195-60627214 | MS.gene52355:intron | 30.0% | |
| AGATATTCAAGGAATTCCAT+GGG | + | chr3.1:60625484-60625503 | MS.gene52355:CDS | 30.0% | |
| ATAAGCTATTCATCCAAAAC+AGG | + | chr3.1:60626236-60626255 | MS.gene52355:intron | 30.0% | |
| ATTATTCTTTCTCATCTGCT+TGG | + | chr3.1:60629420-60629439 | MS.gene52355:CDS | 30.0% | |
| CAAATAATGATTCCCAAGTT+CGG | + | chr3.1:60629020-60629039 | MS.gene52355:CDS | 30.0% | |
| CATATTTAGTAGCAGAAAAC+TGG | - | chr3.1:60627507-60627526 | None:intergenic | 30.0% | |
| CATCCTGCCAAAAAATATAT+GGG | - | chr3.1:60626319-60626338 | None:intergenic | 30.0% | |
| CCTTAAAATTCACATCAGAT+GGG | + | chr3.1:60629561-60629580 | MS.gene52355:CDS | 30.0% | |
| CGAATACATAAACCATAGAA+GGG | - | chr3.1:60627540-60627559 | None:intergenic | 30.0% | |
| CTTAACCTGTTTATGCATTT+AGG | + | chr3.1:60627616-60627635 | MS.gene52355:intron | 30.0% | |
| GAATACATAAACCATAGAAG+GGG | - | chr3.1:60627539-60627558 | None:intergenic | 30.0% | |
| GATATCACTCTAAACAAATC+AGG | - | chr3.1:60628308-60628327 | None:intergenic | 30.0% | |
| GGTCATCAACATAATTTCTA+TGG | - | chr3.1:60626616-60626635 | None:intergenic | 30.0% | |
| GGTTATGATATCTAATTGGA+AGG | - | chr3.1:60628079-60628098 | None:intergenic | 30.0% | |
| GTTAAAACCAACAATCTGTT+CGG | + | chr3.1:60627237-60627256 | MS.gene52355:intron | 30.0% | |
| TAACGAAAATTAATGCACTG+TGG | - | chr3.1:60627221-60627240 | None:intergenic | 30.0% | |
| TAAGCTATTCATCCAAAACA+GGG | + | chr3.1:60626237-60626256 | MS.gene52355:intron | 30.0% | |
| TAATTACCTGTGTATGAAGT+GGG | - | chr3.1:60628100-60628119 | None:intergenic | 30.0% | |
| TACCAGAATTTGAATCATTC+TGG | + | chr3.1:60628823-60628842 | MS.gene52355:intron | 30.0% | |
| TCCTATCATACCATAAACTT+AGG | - | chr3.1:60627690-60627709 | None:intergenic | 30.0% | |
| TCTGCTAAATCCTAAAGTAT+TGG | - | chr3.1:60627178-60627197 | None:intergenic | 30.0% | |
| TGACTGTTTCAGAAAGTTAT+AGG | + | chr3.1:60626091-60626110 | MS.gene52355:intron | 30.0% | |
| TGTTGCTATATTCATTTGGT+GGG | + | chr3.1:60625805-60625824 | MS.gene52355:intron | 30.0% | |
| TTAAAACCAACAATCTGTTC+GGG | + | chr3.1:60627238-60627257 | MS.gene52355:intron | 30.0% | |
| TTGTTGCTATATTCATTTGG+TGG | + | chr3.1:60625804-60625823 | MS.gene52355:intron | 30.0% | |
| TTTAGATTAAACTACCTTCC+CGG | - | chr3.1:60629296-60629315 | None:intergenic | 30.0% | |
| ! | ACATTTTGCTCCCAAAAAAA+TGG | - | chr3.1:60626795-60626814 | None:intergenic | 30.0% |
| ! | ATCAACAATTGCACATTTTC+AGG | + | chr3.1:60625764-60625783 | MS.gene52355:CDS | 30.0% |
| ! | GATATATTTGGTGAAATTGC+TGG | + | chr3.1:60629665-60629684 | MS.gene52355:CDS | 30.0% |
| !! | AATTGTTGATTTGATAAGCC+TGG | - | chr3.1:60625754-60625773 | None:intergenic | 30.0% |
| !! | AGTGGGTTATGATATCTAAT+TGG | - | chr3.1:60628083-60628102 | None:intergenic | 30.0% |
| !! | ATTTTAGTGATTTCCTGTCA+AGG | + | chr3.1:60626998-60627017 | MS.gene52355:intron | 30.0% |
| !! | CTGCTTTAAAGAGAAATAGA+AGG | - | chr3.1:60627642-60627661 | None:intergenic | 30.0% |
| !! | CTTCTATTTCTCTTTAAAGC+AGG | + | chr3.1:60627640-60627659 | MS.gene52355:intron | 30.0% |
| !!! | GTTAACGAGAGTTTTGATTT+TGG | + | chr3.1:60625401-60625420 | MS.gene52355:intron | 30.0% |
| !!! | TAACCCATATATTTTTTGGC+AGG | + | chr3.1:60626313-60626332 | MS.gene52355:intron | 30.0% |
| !!! | TTTTGGTATTCTAGTTTTGC+AGG | + | chr3.1:60626284-60626303 | MS.gene52355:intron | 30.0% |
| AAAACTACTCTGTGATGCAT+TGG | + | chr3.1:60628452-60628471 | MS.gene52355:CDS | 35.0% | |
| AAAATATGGACAAAGTCTGC+TGG | - | chr3.1:60629608-60629627 | None:intergenic | 35.0% | |
| AAGAAATCTTTCAGAGTCCA+TGG | + | chr3.1:60629505-60629524 | MS.gene52355:CDS | 35.0% | |
| AATATCTGACCACATTTGAG+AGG | + | chr3.1:60627711-60627730 | MS.gene52355:intron | 35.0% | |
| AGAAGCTTTCGCATAATGTT+TGG | + | chr3.1:60627782-60627801 | MS.gene52355:intron | 35.0% | |
| ATATCTGACCACATTTGAGA+GGG | + | chr3.1:60627712-60627731 | MS.gene52355:intron | 35.0% | |
| ATGAAGTGCAAATGCCTAAA+TGG | - | chr3.1:60628161-60628180 | None:intergenic | 35.0% | |
| ATGACTTTAAACAACGCTGA+AGG | - | chr3.1:60627925-60627944 | None:intergenic | 35.0% | |
| ATGCATCCATATCCATCAAT+TGG | - | chr3.1:60626948-60626967 | None:intergenic | 35.0% | |
| ATTGGTCCTCATTACTACAA+AGG | + | chr3.1:60628470-60628489 | MS.gene52355:CDS | 35.0% | |
| ATTTATCTTTGTGCCACAAG+TGG | - | chr3.1:60627385-60627404 | None:intergenic | 35.0% | |
| CAATCAATCACACAACATCA+TGG | - | chr3.1:60628130-60628149 | None:intergenic | 35.0% | |
| CATGCTTGACATATGAGTTA+TGG | + | chr3.1:60626008-60626027 | MS.gene52355:intron | 35.0% | |
| CCATCCTGCCAAAAAATATA+TGG | - | chr3.1:60626320-60626339 | None:intergenic | 35.0% | |
| CTATAATTAAGCTTCTCCCA+TGG | - | chr3.1:60625503-60625522 | None:intergenic | 35.0% | |
| CTCCAGAATGATTCAAATTC+TGG | - | chr3.1:60628828-60628847 | None:intergenic | 35.0% | |
| CTTCATTTAGATGCTTACCT+AGG | - | chr3.1:60628919-60628938 | None:intergenic | 35.0% | |
| GAATCTTAATCGACAGGAAA+AGG | - | chr3.1:60627134-60627153 | None:intergenic | 35.0% | |
| GCCTTAAAATTCACATCAGA+TGG | + | chr3.1:60629560-60629579 | MS.gene52355:CDS | 35.0% | |
| GTAATTACCTGTGTATGAAG+TGG | - | chr3.1:60628101-60628120 | None:intergenic | 35.0% | |
| GTAGCCAATATTTGTCCATT+GGG | - | chr3.1:60629449-60629468 | None:intergenic | 35.0% | |
| TAAAACCAACAATCTGTTCG+GGG | + | chr3.1:60627239-60627258 | MS.gene52355:intron | 35.0% | |
| TAGCCAATATTTGTCCATTG+GGG | - | chr3.1:60629448-60629467 | None:intergenic | 35.0% | |
| TCCTCTTGAAGATTTCAGTA+AGG | - | chr3.1:60627298-60627317 | None:intergenic | 35.0% | |
| TCCTTACTGAAATCTTCAAG+AGG | + | chr3.1:60627294-60627313 | MS.gene52355:intron | 35.0% | |
| TGCTTCTGCTAAAGTACATA+AGG | - | chr3.1:60628612-60628631 | None:intergenic | 35.0% | |
| TGTACTGAATCTTAATCGAC+AGG | - | chr3.1:60627140-60627159 | None:intergenic | 35.0% | |
| TGTTAAGGAAAACTTGATGG+TGG | + | chr3.1:60628680-60628699 | MS.gene52355:CDS | 35.0% | |
| TTATTAGGAATGCTTGGAAG+TGG | + | chr3.1:60625692-60625711 | MS.gene52355:intron | 35.0% | |
| TTGGTCCTCATTACTACAAA+GGG | + | chr3.1:60628471-60628490 | MS.gene52355:CDS | 35.0% | |
| TTGTTCATCGTCTTCGAAAT+CGG | - | chr3.1:60625256-60625275 | None:intergenic | 35.0% | |
| TTTACCCCTTTGTAGTAATG+AGG | - | chr3.1:60628479-60628498 | None:intergenic | 35.0% | |
| TTTGTAACTGACCTTACTTC+AGG | + | chr3.1:60626741-60626760 | MS.gene52355:intron | 35.0% | |
| ! | AAAATTGTTTGGCCCTGTTT+TGG | - | chr3.1:60626252-60626271 | None:intergenic | 35.0% |
| ! | AACTGTCTATTTCTTTGCAG+TGG | + | chr3.1:60628977-60628996 | MS.gene52355:intron | 35.0% |
| ! | AATAATCCAAGTGCCCTTTT+AGG | - | chr3.1:60629406-60629425 | None:intergenic | 35.0% |
| ! | AATGGACAAATATTGGCTAC+CGG | + | chr3.1:60629449-60629468 | MS.gene52355:CDS | 35.0% |
| ! | ACTGTCTATTTCTTTGCAGT+GGG | + | chr3.1:60628978-60628997 | MS.gene52355:intron | 35.0% |
| ! | CCCATCTGATGTGAATTTTA+AGG | - | chr3.1:60629564-60629583 | None:intergenic | 35.0% |
| ! | CTATATTCATTTGGTGGGAT+TGG | + | chr3.1:60625810-60625829 | MS.gene52355:intron | 35.0% |
| ! | GAAGTTTTCATGCCAATTGA+TGG | + | chr3.1:60626933-60626952 | MS.gene52355:intron | 35.0% |
| ! | TGATCTCAAGTGTTGTATGT+GGG | - | chr3.1:60627083-60627102 | None:intergenic | 35.0% |
| ! | TGGGTTGTTTCAAGTATGAT+TGG | + | chr3.1:60629071-60629090 | MS.gene52355:CDS | 35.0% |
| ! | TTCATGCCAATTGATGGATA+TGG | + | chr3.1:60626939-60626958 | MS.gene52355:intron | 35.0% |
| !! | AAAAAGGCTTTTTCCTTGAC+AGG | - | chr3.1:60627014-60627033 | None:intergenic | 35.0% |
| !! | CTATTTCTCTTTAAAGCAGG+TGG | + | chr3.1:60627643-60627662 | MS.gene52355:intron | 35.0% |
| !! | GCTTTAGTTCTAACTCTGTT+TGG | + | chr3.1:60625982-60626001 | MS.gene52355:intron | 35.0% |
| !! | TCACAGAGTAGTTTTGCATA+AGG | - | chr3.1:60628447-60628466 | None:intergenic | 35.0% |
| !!! | CCATATATTTTTTGGCAGGA+TGG | + | chr3.1:60626317-60626336 | MS.gene52355:intron | 35.0% |
| !!! | CGAGAGTTTTGATTTTGGTT+TGG | + | chr3.1:60625406-60625425 | MS.gene52355:intron | 35.0% |
| AAATCTTTCAGAGTCCATGG+CGG | + | chr3.1:60629508-60629527 | MS.gene52355:CDS | 40.0% | |
| ACCCACCGTTCTAACATTTA+CGG | + | chr3.1:60628256-60628275 | MS.gene52355:intron | 40.0% | |
| AGGACCCGTAAATGTTAGAA+CGG | - | chr3.1:60628264-60628283 | None:intergenic | 40.0% | |
| AGGCTCAAAATCCTGAAGTA+AGG | - | chr3.1:60626755-60626774 | None:intergenic | 40.0% | |
| AGGTCACTGGAAACCTAAAA+GGG | + | chr3.1:60629390-60629409 | MS.gene52355:intron | 40.0% | |
| AGTGCTTAATGTGGCAAAAC+CGG | + | chr3.1:60628501-60628520 | MS.gene52355:CDS | 40.0% | |
| ATAGAATGCTTCTGCTAGTC+CGG | + | chr3.1:60629210-60629229 | MS.gene52355:intron | 40.0% | |
| ATATGGATGCATCAAGGCTA+TGG | + | chr3.1:60626956-60626975 | MS.gene52355:intron | 40.0% | |
| CGAAACGGGAAAGATATTCA+AGG | + | chr3.1:60625473-60625492 | MS.gene52355:CDS | 40.0% | |
| CTGATAGCTGATGCTAATAC+CGG | + | chr3.1:60629274-60629293 | MS.gene52355:CDS | 40.0% | |
| CTTAATCGACAGGAAAAGGA+TGG | - | chr3.1:60627130-60627149 | None:intergenic | 40.0% | |
| CTTCAAGAGGAAAGCTTACA+TGG | + | chr3.1:60627307-60627326 | MS.gene52355:intron | 40.0% | |
| CTTGGAAGACGATTTCGAAA+CGG | + | chr3.1:60625335-60625354 | MS.gene52355:CDS | 40.0% | |
| CTTGGGAAGACCTAAGTTTA+TGG | + | chr3.1:60627677-60627696 | MS.gene52355:intron | 40.0% | |
| GAAGACTGATACTTCAGCTT+TGG | + | chr3.1:60625445-60625464 | MS.gene52355:CDS | 40.0% | |
| GAAGGCCTAAATGCATAAAC+AGG | - | chr3.1:60627624-60627643 | None:intergenic | 40.0% | |
| GGCTGACATATTGTCTTAGT+TGG | + | chr3.1:60627328-60627347 | MS.gene52355:intron | 40.0% | |
| GGCTGTTAAGGAAAACTTGA+TGG | + | chr3.1:60628677-60628696 | MS.gene52355:CDS | 40.0% | |
| GGTAGCCAATATTTGTCCAT+TGG | - | chr3.1:60629450-60629469 | None:intergenic | 40.0% | |
| GGTGGGTATAATATGTCAGA+TGG | - | chr3.1:60628243-60628262 | None:intergenic | 40.0% | |
| GTAGCTGAGGAATCTATTGT+GGG | + | chr3.1:60628399-60628418 | MS.gene52355:intron | 40.0% | |
| GTGTTATACTTATGTGCGTC+TGG | + | chr3.1:60626531-60626550 | MS.gene52355:intron | 40.0% | |
| GTTATGGCTATGAACGTGTT+TGG | + | chr3.1:60626024-60626043 | MS.gene52355:intron | 40.0% | |
| TAGATGCTTACCTAGGATTG+CGG | - | chr3.1:60628912-60628931 | None:intergenic | 40.0% | |
| TCATAACCCACTTCATACAC+AGG | + | chr3.1:60628091-60628110 | MS.gene52355:intron | 40.0% | |
| TGATAGCTGATGCTAATACC+GGG | + | chr3.1:60629275-60629294 | MS.gene52355:CDS | 40.0% | |
| TGCATCAAAAACCCGAACTT+GGG | - | chr3.1:60629035-60629054 | None:intergenic | 40.0% | |
| TGGTCCTCATTACTACAAAG+GGG | + | chr3.1:60628472-60628491 | MS.gene52355:CDS | 40.0% | |
| TGTAGCTGAGGAATCTATTG+TGG | + | chr3.1:60628398-60628417 | MS.gene52355:intron | 40.0% | |
| TTCGAAATCGTCTTCCAAGT+CGG | - | chr3.1:60625334-60625353 | None:intergenic | 40.0% | |
| TTTATACTACCACATCCAGC+TGG | + | chr3.1:60625958-60625977 | MS.gene52355:intron | 40.0% | |
| ! | ATGGACAAATATTGGCTACC+GGG | + | chr3.1:60629450-60629469 | MS.gene52355:CDS | 40.0% |
| ! | CAAGTTTTCCTTAACAGCCA+TGG | - | chr3.1:60628676-60628695 | None:intergenic | 40.0% |
| ! | CACATCAGATGGGAAGTTTT+TGG | + | chr3.1:60629571-60629590 | MS.gene52355:CDS | 40.0% |
| ! | CTGATCTCAAGTGTTGTATG+TGG | - | chr3.1:60627084-60627103 | None:intergenic | 40.0% |
| ! | GCAGAGAATTTTGTTGCTCT+GGG | + | chr3.1:60629052-60629071 | MS.gene52355:CDS | 40.0% |
| ! | TGATGGATATGGATGCATCA+AGG | + | chr3.1:60626950-60626969 | MS.gene52355:intron | 40.0% |
| ! | TGATTGTGCATCGACCATTT+AGG | + | chr3.1:60628144-60628163 | MS.gene52355:intron | 40.0% |
| ! | TGCAGAGAATTTTGTTGCTC+TGG | + | chr3.1:60629051-60629070 | MS.gene52355:CDS | 40.0% |
| ! | TTTTGGCAGGATGGAATTAG+AGG | + | chr3.1:60626326-60626345 | MS.gene52355:intron | 40.0% |
| !! | AAAGTTGGTAGCTGTTCTTG+GGG | + | chr3.1:60629237-60629256 | MS.gene52355:CDS | 40.0% |
| !! | GAAAGTTGGTAGCTGTTCTT+GGG | + | chr3.1:60629236-60629255 | MS.gene52355:CDS | 40.0% |
| !! | GGGTAAAGAAGTGCTTAATG+TGG | + | chr3.1:60628492-60628511 | MS.gene52355:CDS | 40.0% |
| !! | GTACTTTAGCAGAAGCATTG+TGG | + | chr3.1:60628615-60628634 | MS.gene52355:intron | 40.0% |
| AAGTAGCTACGTACAAGGGT+TGG | - | chr3.1:60628532-60628551 | None:intergenic | 45.0% | |
| AATCAGCACCATGGCTGTTA+AGG | + | chr3.1:60628665-60628684 | MS.gene52355:CDS | 45.0% | |
| ACAGCTACCAACTTTCCATC+CGG | - | chr3.1:60629232-60629251 | None:intergenic | 45.0% | |
| ACCCGTAAATGTTAGAACGG+TGG | - | chr3.1:60628261-60628280 | None:intergenic | 45.0% | |
| AGAGTCCATGGCGGTATTAA+AGG | + | chr3.1:60629517-60629536 | MS.gene52355:CDS | 45.0% | |
| CAGGTCACTGGAAACCTAAA+AGG | + | chr3.1:60629389-60629408 | MS.gene52355:intron | 45.0% | |
| CCAATTTCTATTGGTGCACG+TGG | - | chr3.1:60626485-60626504 | None:intergenic | 45.0% | |
| CCACGTGCACCAATAGAAAT+TGG | + | chr3.1:60626482-60626501 | MS.gene52355:intron | 45.0% | |
| CCCACCGTTCTAACATTTAC+GGG | + | chr3.1:60628257-60628276 | MS.gene52355:intron | 45.0% | |
| CCCGTAAATGTTAGAACGGT+GGG | - | chr3.1:60628260-60628279 | None:intergenic | 45.0% | |
| CGAGATCGACGTTGTTGAAT+TGG | - | chr3.1:60625194-60625213 | None:intergenic | 45.0% | |
| CGGTATTAGCATCAGCTATC+AGG | - | chr3.1:60629276-60629295 | None:intergenic | 45.0% | |
| CGTACAAGGGTTGGAATAAC+CGG | - | chr3.1:60628523-60628542 | None:intergenic | 45.0% | |
| CTAACAAGCTACCGTAGGTT+CGG | - | chr3.1:60629739-60629758 | None:intergenic | 45.0% | |
| CTGCATCAAAAACCCGAACT+TGG | - | chr3.1:60629036-60629055 | None:intergenic | 45.0% | |
| GAACTCTAACAAGCTACCGT+AGG | - | chr3.1:60629744-60629763 | None:intergenic | 45.0% | |
| GAATGCTTGGAAGTGGAGAA+AGG | + | chr3.1:60625699-60625718 | MS.gene52355:CDS | 45.0% | |
| GAGTCCATGGCGGTATTAAA+GGG | + | chr3.1:60629518-60629537 | MS.gene52355:CDS | 45.0% | |
| GCACCCCAATGGACAAATAT+TGG | + | chr3.1:60629442-60629461 | MS.gene52355:CDS | 45.0% | |
| GCGGTATTAAAGGGACGAAT+GGG | + | chr3.1:60629527-60629546 | MS.gene52355:CDS | 45.0% | |
| GCTGTCTTAGTTACCACTTG+TGG | + | chr3.1:60627369-60627388 | MS.gene52355:intron | 45.0% | |
| TAGTGCTATAACCAACGCAG+TGG | + | chr3.1:60628879-60628898 | MS.gene52355:CDS | 45.0% | |
| TATGGTATCTCTCAGGTCAC+TGG | + | chr3.1:60629377-60629396 | MS.gene52355:intron | 45.0% | |
| TCAGCCCTAACGACTTATGA+AGG | + | chr3.1:60628769-60628788 | MS.gene52355:intron | 45.0% | |
| TCCTGTTCAACGCTAGAATG+TGG | + | chr3.1:60628280-60628299 | MS.gene52355:intron | 45.0% | |
| TGCATGATCATCCCCTTCTA+TGG | + | chr3.1:60627525-60627544 | MS.gene52355:intron | 45.0% | |
| TGTTAGAGCCCTCTCAAATG+TGG | - | chr3.1:60627723-60627742 | None:intergenic | 45.0% | |
| TGTTGTATGTGGGTGTGGAT+TGG | - | chr3.1:60627073-60627092 | None:intergenic | 45.0% | |
| ! | AATATTGGCTACCGGGAATC+AGG | + | chr3.1:60629457-60629476 | MS.gene52355:CDS | 45.0% |
| ! | ACCACATTCTAGCGTTGAAC+AGG | - | chr3.1:60628284-60628303 | None:intergenic | 45.0% |
| ! | ATCTTTTAGCCCAGACACAG+AGG | + | chr3.1:60629691-60629710 | MS.gene52355:CDS | 45.0% |
| ! | GTGAGGAGGATTTTCGGATA+AGG | - | chr3.1:60625283-60625302 | None:intergenic | 45.0% |
| ! | GTTACGGTGAGGAGGATTTT+CGG | - | chr3.1:60625289-60625308 | None:intergenic | 45.0% |
| ! | GTTAGAACTAAAGCACCAGC+TGG | - | chr3.1:60625976-60625995 | None:intergenic | 45.0% |
| ! | TCAAGTGTTGTATGTGGGTG+TGG | - | chr3.1:60627078-60627097 | None:intergenic | 45.0% |
| ! | TGGATGTTTTCCGCAATCCT+AGG | + | chr3.1:60628899-60628918 | MS.gene52355:CDS | 45.0% |
| !! | AAGGAAAACTTGATGGTGGC+AGG | + | chr3.1:60628684-60628703 | MS.gene52355:CDS | 45.0% |
| !! | AGTCAGAATCGGAGGTGTTA+CGG | - | chr3.1:60625305-60625324 | None:intergenic | 45.0% |
| !! | GGAAAGTTGGTAGCTGTTCT+TGG | + | chr3.1:60629235-60629254 | MS.gene52355:CDS | 45.0% |
| !! | TCAGCTTTGGAAGCACGAAA+CGG | + | chr3.1:60625458-60625477 | MS.gene52355:CDS | 45.0% |
| !! | TGGAAACCTAAAAGGGCACT+TGG | + | chr3.1:60629397-60629416 | MS.gene52355:CDS | 45.0% |
| !!! | AGATGGGAAGTTTTTGGCCA+TGG | + | chr3.1:60629577-60629596 | MS.gene52355:CDS | 45.0% |
| !!! | ATTTTTTCTATATATAATTT+TGG | + | chr3.1:60626267-60626286 | MS.gene52355:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTGTTATT+AGG | + | chr3.1:60625677-60625696 | MS.gene52355:intron | 5.0% |
| AATGCTTCTGCTAGTCCGGA+TGG | + | chr3.1:60629214-60629233 | MS.gene52355:CDS | 50.0% | |
| ACAAACAGAGCCTCTGTGTC+TGG | - | chr3.1:60629704-60629723 | None:intergenic | 50.0% | |
| AGCTGATGCTAATACCGGGA+AGG | + | chr3.1:60629279-60629298 | MS.gene52355:CDS | 50.0% | |
| AGGACACAACATGCAGGTTG+TGG | + | chr3.1:60629477-60629496 | MS.gene52355:CDS | 50.0% | |
| AGGGACGAATGGGTGCAATA+AGG | + | chr3.1:60629537-60629556 | MS.gene52355:CDS | 50.0% | |
| AGGTGGAAAGTGAGCAGCTT+GGG | + | chr3.1:60627660-60627679 | MS.gene52355:intron | 50.0% | |
| ATCGTCTTCCAAGTCGGAGT+CGG | - | chr3.1:60625328-60625347 | None:intergenic | 50.0% | |
| CAAACAGAGCCTCTGTGTCT+GGG | - | chr3.1:60629703-60629722 | None:intergenic | 50.0% | |
| CAGAACCCCGAACAGATTGT+TGG | - | chr3.1:60627247-60627266 | None:intergenic | 50.0% | |
| CTCTCGTGAAGACCTTGACA+AGG | + | chr3.1:60625583-60625602 | MS.gene52355:CDS | 50.0% | |
| GACACAGAGGCTCTGTTTGT+TGG | + | chr3.1:60629704-60629723 | MS.gene52355:CDS | 50.0% | |
| GAGGCGGACCCCTTTATATA+AGG | + | chr3.1:60626345-60626364 | MS.gene52355:intron | 50.0% | |
| GCATGTTGTGTCCTGATTCC+CGG | - | chr3.1:60629471-60629490 | None:intergenic | 50.0% | |
| GGAATCAGGACACAACATGC+AGG | + | chr3.1:60629471-60629490 | MS.gene52355:CDS | 50.0% | |
| GGACACAACATGCAGGTTGT+GGG | + | chr3.1:60629478-60629497 | MS.gene52355:CDS | 50.0% | |
| GGCGGTATTAAAGGGACGAA+TGG | + | chr3.1:60629526-60629545 | MS.gene52355:CDS | 50.0% | |
| GGGACGAATGGGTGCAATAA+GGG | + | chr3.1:60629538-60629557 | MS.gene52355:CDS | 50.0% | |
| GGGAGCTTCTTTGCAAGGTA+GGG | + | chr3.1:60628718-60628737 | MS.gene52355:intron | 50.0% | |
| GGGGCCTTCATAAGTCGTTA+GGG | - | chr3.1:60628776-60628795 | None:intergenic | 50.0% | |
| TCGTCCCTTTAATACCGCCA+TGG | - | chr3.1:60629525-60629544 | None:intergenic | 50.0% | |
| TCTTTGCAGTGGGTCGTTGA+GGG | + | chr3.1:60628988-60629007 | MS.gene52355:intron | 50.0% | |
| TGCTAGTCCGGATGGAAAGT+TGG | + | chr3.1:60629222-60629241 | MS.gene52355:CDS | 50.0% | |
| TGGCAGGATGGAATTAGAGG+CGG | + | chr3.1:60626329-60626348 | MS.gene52355:intron | 50.0% | |
| TTCTTTGCAGTGGGTCGTTG+AGG | + | chr3.1:60628987-60629006 | MS.gene52355:intron | 50.0% | |
| ! | ACTAAAGCACCAGCTGGATG+TGG | - | chr3.1:60625970-60625989 | None:intergenic | 50.0% |
| ! | GTGGCTTGTCTTTGTAGCTG+AGG | + | chr3.1:60628386-60628405 | MS.gene52355:intron | 50.0% |
| ! | GTTCTTGGGGACAGTACTGA+AGG | + | chr3.1:60629250-60629269 | MS.gene52355:CDS | 50.0% |
| ! | TGATTTGCACTCGCGAGACA+GGG | - | chr3.1:60628650-60628669 | None:intergenic | 50.0% |
| !! | CAGCTTTGGAAGCACGAAAC+GGG | + | chr3.1:60625459-60625478 | MS.gene52355:CDS | 50.0% |
| !! | GAAAACTTGATGGTGGCAGG+TGG | + | chr3.1:60628687-60628706 | MS.gene52355:CDS | 50.0% |
| !! | TGTATGTGGGTGTGGATTGG+TGG | - | chr3.1:60627070-60627089 | None:intergenic | 50.0% |
| CAGGTGGAAAGTGAGCAGCT+TGG | + | chr3.1:60627659-60627678 | MS.gene52355:intron | 55.0% | |
| CCATGGGGAGCTTCTTTGCA+AGG | + | chr3.1:60628713-60628732 | MS.gene52355:CDS | 55.0% | |
| CCTTGCAAAGAAGCTCCCCA+TGG | - | chr3.1:60628716-60628735 | None:intergenic | 55.0% | |
| GCGAGTGCAAATCAGCACCA+TGG | + | chr3.1:60628656-60628675 | MS.gene52355:CDS | 55.0% | |
| GCGGAAAACATCCACTGCGT+TGG | - | chr3.1:60628893-60628912 | None:intergenic | 55.0% | |
| GGGGAGCTTCTTTGCAAGGT+AGG | + | chr3.1:60628717-60628736 | MS.gene52355:intron | 55.0% | |
| GGGGGCCTTCATAAGTCGTT+AGG | - | chr3.1:60628777-60628796 | None:intergenic | 55.0% | |
| GTCGGAGTCGGAGTCAGAAT+CGG | - | chr3.1:60625316-60625335 | None:intergenic | 55.0% | |
| TCATCTGCTTGGCACCCCAA+TGG | + | chr3.1:60629431-60629450 | MS.gene52355:CDS | 55.0% | |
| TTCTGACTCCGACTCCGACT+TGG | + | chr3.1:60625317-60625336 | MS.gene52355:CDS | 55.0% | |
| TTGGTGCACGTGGAAGAACG+AGG | - | chr3.1:60626475-60626494 | None:intergenic | 55.0% | |
| ! | AGAGGCTCTGTTTGTTGGCG+TGG | + | chr3.1:60629709-60629728 | MS.gene52355:CDS | 55.0% |
| ! | CTGATTTGCACTCGCGAGAC+AGG | - | chr3.1:60628651-60628670 | None:intergenic | 55.0% |
| !! | AAAGTCTGCTGGCTCAGCCA+TGG | - | chr3.1:60629597-60629616 | None:intergenic | 55.0% |
| !! | GAATCGGAGGTGTTACGGTG+AGG | - | chr3.1:60625300-60625319 | None:intergenic | 55.0% |
| ATGGTGGCAGGTGGCTTCCA+TGG | + | chr3.1:60628696-60628715 | MS.gene52355:CDS | 60.0% | |
| GGAGTCGGAGTCAGAATCGG+AGG | - | chr3.1:60625313-60625332 | None:intergenic | 60.0% | |
| TGGTGGCAGGTGGCTTCCAT+GGG | + | chr3.1:60628697-60628716 | MS.gene52355:CDS | 60.0% | |
| TTGCACTCGCGAGACAGGGT+GGG | - | chr3.1:60628646-60628665 | None:intergenic | 60.0% | |
| TTTGCACTCGCGAGACAGGG+TGG | - | chr3.1:60628647-60628666 | None:intergenic | 60.0% | |
| !! | TCGGAGGTGTTACGGTGAGG+AGG | - | chr3.1:60625297-60625316 | None:intergenic | 60.0% |
| GGCGTGGCTGACCGAACCTA+CGG | + | chr3.1:60629725-60629744 | MS.gene52355:CDS | 65.0% | |
| GGTGGCAGGTGGCTTCCATG+GGG | + | chr3.1:60628698-60628717 | MS.gene52355:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 60625186 | 60629805 | 60625186 | ID=MS.gene52355 |
| chr3.1 | mRNA | 60625186 | 60629805 | 60625186 | ID=MS.gene52355.t1;Parent=MS.gene52355 |
| chr3.1 | exon | 60625186 | 60625356 | 60625186 | ID=MS.gene52355.t1.exon1;Parent=MS.gene52355.t1 |
| chr3.1 | CDS | 60625186 | 60625356 | 60625186 | ID=cds.MS.gene52355.t1;Parent=MS.gene52355.t1 |
| chr3.1 | exon | 60625437 | 60625604 | 60625437 | ID=MS.gene52355.t1.exon2;Parent=MS.gene52355.t1 |
| chr3.1 | CDS | 60625437 | 60625604 | 60625437 | ID=cds.MS.gene52355.t1;Parent=MS.gene52355.t1 |
| chr3.1 | exon | 60625699 | 60625785 | 60625699 | ID=MS.gene52355.t1.exon3;Parent=MS.gene52355.t1 |
| chr3.1 | CDS | 60625699 | 60625785 | 60625699 | ID=cds.MS.gene52355.t1;Parent=MS.gene52355.t1 |
| chr3.1 | exon | 60628403 | 60628537 | 60628403 | ID=MS.gene52355.t1.exon4;Parent=MS.gene52355.t1 |
| chr3.1 | CDS | 60628403 | 60628537 | 60628403 | ID=cds.MS.gene52355.t1;Parent=MS.gene52355.t1 |
| chr3.1 | exon | 60628627 | 60628734 | 60628627 | ID=MS.gene52355.t1.exon5;Parent=MS.gene52355.t1 |
| chr3.1 | CDS | 60628627 | 60628734 | 60628627 | ID=cds.MS.gene52355.t1;Parent=MS.gene52355.t1 |
| chr3.1 | exon | 60628829 | 60628920 | 60628829 | ID=MS.gene52355.t1.exon6;Parent=MS.gene52355.t1 |
| chr3.1 | CDS | 60628829 | 60628920 | 60628829 | ID=cds.MS.gene52355.t1;Parent=MS.gene52355.t1 |
| chr3.1 | exon | 60628997 | 60629102 | 60628997 | ID=MS.gene52355.t1.exon7;Parent=MS.gene52355.t1 |
| chr3.1 | CDS | 60628997 | 60629102 | 60628997 | ID=cds.MS.gene52355.t1;Parent=MS.gene52355.t1 |
| chr3.1 | exon | 60629214 | 60629300 | 60629214 | ID=MS.gene52355.t1.exon8;Parent=MS.gene52355.t1 |
| chr3.1 | CDS | 60629214 | 60629300 | 60629214 | ID=cds.MS.gene52355.t1;Parent=MS.gene52355.t1 |
| chr3.1 | exon | 60629392 | 60629805 | 60629392 | ID=MS.gene52355.t1.exon9;Parent=MS.gene52355.t1 |
| chr3.1 | CDS | 60629392 | 60629805 | 60629392 | ID=cds.MS.gene52355.t1;Parent=MS.gene52355.t1 |
| Gene Sequence |
| Protein sequence |
