AlfalfaGEDB | MS.gene39623

M. sativa cultivar XinJiangDaYe / MS.gene39623

KEGG: -
GO: GO:0003674 GO:0003676 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00076.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39623.t1	RHN62234.1	93.5	309	20	0	47	355	146	454	1.60E-145	525.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39623.t1	Q9LEB3	63.5	310	105	4	47	355	114	416	3.1e-102	373.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39623.t1	A0A396IDA7	93.5	309	20	0	47	355	146	454	1.1e-145	525.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene058210	MS.gene39623	0.824735	6.87E-54	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene39623	MS.gene99973	PPI
MS.gene49477	MS.gene39623	PPI
MS.gene39623	MS.gene008833	PPI
MS.gene23852	MS.gene39623	PPI
MS.gene69966	MS.gene39623	PPI
MS.gene97943	MS.gene39623	PPI
MS.gene63539	MS.gene39623	PPI
MS.gene071113	MS.gene39623	PPI
MS.gene39623	MS.gene48655	PPI
MS.gene30433	MS.gene39623	PPI
MS.gene022109	MS.gene39623	PPI
MS.gene34979	MS.gene39623	PPI
MS.gene010910	MS.gene39623	PPI
MS.gene023253	MS.gene39623	PPI
MS.gene07706	MS.gene39623	PPI
MS.gene20737	MS.gene39623	PPI
MS.gene69687	MS.gene39623	PPI
MS.gene26279	MS.gene39623	PPI
MS.gene39623	MS.gene35394	PPI
MS.gene39623	MS.gene23196	PPI
MS.gene23811	MS.gene39623	PPI
MS.gene23810	MS.gene39623	PPI
MS.gene51650	MS.gene39623	PPI
MS.gene39623	MS.gene038519	PPI
MS.gene39623	MS.gene025139	PPI
MS.gene51335	MS.gene39623	PPI
MS.gene78281	MS.gene39623	PPI
MS.gene037950	MS.gene39623	PPI
MS.gene70008	MS.gene39623	PPI
MS.gene39623	MS.gene07219	PPI
MS.gene068249	MS.gene39623	PPI
MS.gene39623	MS.gene26021	PPI
MS.gene39623	MS.gene51258	PPI
MS.gene39623	MS.gene008536	PPI
MS.gene39623	MS.gene32726	PPI
MS.gene066464	MS.gene39623	PPI
MS.gene39623	MS.gene71122	PPI
MS.gene051853	MS.gene39623	PPI
MS.gene39623	MS.gene028204	PPI
MS.gene71204	MS.gene39623	PPI
MS.gene51262	MS.gene39623	PPI
MS.gene050270	MS.gene39623	PPI
MS.gene39623	MS.gene058470	PPI
MS.gene24922	MS.gene39623	PPI
MS.gene066467	MS.gene39623	PPI
MS.gene34712	MS.gene39623	PPI
MS.gene027441	MS.gene39623	PPI
MS.gene39623	MS.gene38491	PPI
MS.gene99554	MS.gene39623	PPI
MS.gene39623	MS.gene022835	PPI
MS.gene33104	MS.gene39623	PPI
MS.gene99588	MS.gene39623	PPI
MS.gene41291	MS.gene39623	PPI
MS.gene27223	MS.gene39623	PPI
MS.gene39623	MS.gene65775	PPI
MS.gene39623	MS.gene32723	PPI
MS.gene39623	MS.gene80163	PPI
MS.gene39623	MS.gene049505	PPI
MS.gene010046	MS.gene39623	PPI
MS.gene012266	MS.gene39623	PPI
MS.gene016104	MS.gene39623	PPI
MS.gene052956	MS.gene39623	PPI
MS.gene21270	MS.gene39623	PPI
MS.gene39623	MS.gene51278	PPI
MS.gene043662	MS.gene39623	PPI
MS.gene39623	MS.gene87218	PPI
MS.gene034471	MS.gene39623	PPI
MS.gene039682	MS.gene39623	PPI
MS.gene41529	MS.gene39623	PPI
MS.gene85534	MS.gene39623	PPI
MS.gene43053	MS.gene39623	PPI
MS.gene042783	MS.gene39623	PPI
MS.gene39623	MS.gene23881	PPI
MS.gene39623	MS.gene051498	PPI
MS.gene39623	MS.gene014931	PPI
MS.gene33377	MS.gene39623	PPI
MS.gene39623	MS.gene062662	PPI
MS.gene049909	MS.gene39623	PPI
MS.gene009684	MS.gene39623	PPI
MS.gene020080	MS.gene39623	PPI
MS.gene017215	MS.gene39623	PPI
MS.gene97379	MS.gene39623	PPI
MS.gene56285	MS.gene39623	PPI
MS.gene009485	MS.gene39623	PPI
MS.gene066501	MS.gene39623	PPI
MS.gene63085	MS.gene39623	PPI
MS.gene056455	MS.gene39623	PPI
MS.gene89986	MS.gene39623	PPI
MS.gene61957	MS.gene39623	PPI
MS.gene005596	MS.gene39623	PPI
MS.gene69965	MS.gene39623	PPI
MS.gene066500	MS.gene39623	PPI
MS.gene57575	MS.gene39623	PPI
MS.gene39623	MS.gene067705	PPI
MS.gene08365	MS.gene39623	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39623.t1	MTR_4g086600	94.260	331	13	1	31	355	124	454	0.0	585
MS.gene39623.t1	MTR_1g020080	60.841	309	100	4	42	349	122	410	1.46e-127	372
MS.gene39623.t1	MTR_3g101370	52.073	386	129	8	1	349	42	408	2.77e-125	366
MS.gene39623.t1	MTR_4g131970	54.859	319	106	6	39	345	96	388	1.93e-110	328
MS.gene39623.t1	MTR_2g022950	59.420	276	93	4	42	316	85	342	1.09e-107	321
MS.gene39623.t1	MTR_2g097960	52.532	316	131	5	39	340	37	347	8.30e-105	315
MS.gene39623.t1	MTR_1g020080	60.697	201	59	3	42	242	122	302	1.95e-78	243
MS.gene39623.t1	MTR_3g101370	48.162	272	87	7	1	237	42	294	1.17e-74	233
MS.gene39623.t1	MTR_2g022950	62.353	170	59	2	42	210	85	250	1.45e-66	211
MS.gene39623.t1	MTR_2g022950	67.097	155	46	2	42	195	85	235	6.00e-66	210
MS.gene39623.t1	MTR_3g109090	33.455	275	156	9	43	308	70	326	1.19e-33	129
MS.gene39623.t1	MTR_3g109090	33.455	275	156	9	43	308	86	342	1.38e-33	129
MS.gene39623.t1	MTR_4g124940	31.399	293	176	9	27	308	49	327	3.96e-31	122
MS.gene39623.t1	MTR_8g022050	30.612	294	178	10	27	308	65	344	1.06e-27	112
MS.gene39623.t1	MTR_7g102730	26.217	267	149	8	41	300	34	259	2.04e-20	92.8
MS.gene39623.t1	MTR_7g102730	29.231	260	145	10	43	292	124	354	1.59e-18	87.4
MS.gene39623.t1	MTR_4g085540	27.758	281	166	10	43	314	148	400	4.51e-20	92.0
MS.gene39623.t1	MTR_4g085540	26.923	260	144	8	42	295	59	278	1.23e-16	81.6
MS.gene39623.t1	MTR_4g085540	28.421	190	99	5	116	300	35	192	2.96e-16	80.5
MS.gene39623.t1	MTR_1g097440	27.305	282	156	10	42	316	55	294	7.25e-16	79.3
MS.gene39623.t1	MTR_1g097440	25.660	265	165	10	43	300	144	383	1.80e-14	75.1
MS.gene39623.t1	MTR_1g097440	30.864	162	100	6	43	196	235	392	2.22e-11	65.5
MS.gene39623.t1	MTR_1g019150	26.298	289	163	10	42	314	145	399	7.59e-16	79.3
MS.gene39623.t1	MTR_1g019150	27.027	259	145	8	42	295	57	276	2.67e-15	77.4
MS.gene39623.t1	MTR_3g075500	35.625	160	91	5	46	200	138	290	8.82e-16	77.0
MS.gene39623.t1	MTR_3g065190	28.824	170	110	3	43	212	51	209	5.10e-15	75.9
MS.gene39623.t1	MTR_4g104470	32.692	156	96	4	46	198	151	300	8.65e-15	74.3
MS.gene39623.t1	MTR_6g040190	25.556	270	152	8	43	307	51	276	1.68e-14	75.1
MS.gene39623.t1	MTR_3g102040	27.344	256	142	8	42	292	49	265	2.29e-14	74.7
MS.gene39623.t1	MTR_3g102040	24.735	283	172	10	43	314	138	390	7.94e-13	70.1
MS.gene39623.t1	MTR_1g056520	29.936	157	104	3	43	196	134	287	5.51e-14	72.0
MS.gene39623.t1	MTR_3g075500	36.691	139	76	5	46	179	138	269	1.91e-13	70.1
MS.gene39623.t1	MTR_1g080150	40.789	76	44	1	114	189	131	205	2.96e-13	68.9
MS.gene39623.t1	MTR_1g045510	31.788	151	95	4	47	197	143	285	4.94e-13	68.9
MS.gene39623.t1	MTR_7g106440	26.627	169	108	4	43	201	135	297	9.35e-11	62.8
MS.gene39623.t1	MTR_5g017280	26.300	327	185	11	48	335	35	344	9.72e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39623.t1	AT3G19130	70.609	279	76	3	39	317	130	402	2.80e-141	408
MS.gene39623.t1	AT1G49600	63.889	324	98	7	23	345	128	433	7.30e-136	394
MS.gene39623.t1	AT1G49600	68.519	270	75	2	39	308	141	400	1.94e-128	375
MS.gene39623.t1	AT1G49600	68.519	270	75	2	39	308	141	400	1.94e-128	375
MS.gene39623.t1	AT1G47500	61.736	311	100	5	40	349	128	420	8.94e-128	373
MS.gene39623.t1	AT1G47490	52.577	388	124	8	3	350	52	419	1.26e-126	370
MS.gene39623.t1	AT1G11650	52.941	306	117	6	39	342	84	364	4.36e-101	304
MS.gene39623.t1	AT5G19350	48.214	336	142	5	42	354	49	375	7.28e-101	304
MS.gene39623.t1	AT5G54900	52.349	298	122	3	42	338	85	363	1.44e-100	302
MS.gene39623.t1	AT5G19350	48.368	337	144	5	42	354	49	379	2.65e-100	303
MS.gene39623.t1	AT4G27000	55.797	276	100	4	42	316	105	359	2.40e-98	298
MS.gene39623.t1	AT1G11650	54.098	244	89	5	39	280	84	306	6.57e-84	257
MS.gene39623.t1	AT1G47490	48.551	276	84	6	3	239	52	308	8.25e-76	236
MS.gene39623.t1	AT1G47500	61.111	198	60	3	40	237	128	308	8.49e-76	236
MS.gene39623.t1	AT1G54080	32.841	271	163	8	43	308	89	345	3.31e-35	133
MS.gene39623.t1	AT3G14100	33.333	294	170	10	27	308	62	341	3.93e-34	130
MS.gene39623.t1	AT1G54080	32.364	275	163	9	43	308	89	349	1.58e-33	129
MS.gene39623.t1	AT1G17370	33.333	294	170	10	27	308	57	336	2.47e-33	128
MS.gene39623.t1	AT1G17370	33.673	294	166	11	27	308	57	333	5.89e-33	127
MS.gene39623.t1	AT2G23350	28.832	274	156	11	43	306	160	404	1.65e-20	93.2
MS.gene39623.t1	AT2G23350	26.923	260	138	10	42	292	71	287	1.77e-12	68.9
MS.gene39623.t1	AT2G23350	31.515	165	93	5	44	196	251	407	2.80e-12	68.2
MS.gene39623.t1	AT4G34110	30.216	278	163	10	43	314	150	402	7.10e-20	91.3
MS.gene39623.t1	AT4G34110	26.275	255	144	8	43	292	62	277	1.41e-16	81.3
MS.gene39623.t1	AT1G34140	26.007	273	167	8	42	307	56	300	1.39e-18	86.7
MS.gene39623.t1	AT1G71770	26.199	271	169	9	43	306	172	418	2.82e-18	86.7
MS.gene39623.t1	AT1G71770	26.199	271	169	9	43	306	172	418	2.82e-18	86.7
MS.gene39623.t1	AT1G49760	26.354	277	175	8	43	314	159	411	1.02e-17	85.1
MS.gene39623.t1	AT1G49760	28.016	257	139	7	42	292	70	286	1.86e-15	78.2
MS.gene39623.t1	AT1G49760	26.354	277	175	8	43	314	159	411	1.02e-17	85.1
MS.gene39623.t1	AT1G49760	28.016	257	139	7	42	292	70	286	1.86e-15	78.2
MS.gene39623.t1	AT5G50250	32.667	150	96	2	46	195	142	286	1.51e-14	73.6
MS.gene39623.t1	AT4G24770	33.758	157	94	4	46	198	179	329	1.91e-14	73.9
MS.gene39623.t1	AT4G24770	33.758	157	94	4	46	198	179	329	1.91e-14	73.9
MS.gene39623.t1	AT1G22760	25.373	268	155	8	39	300	71	299	2.26e-14	74.7
MS.gene39623.t1	AT3G16380	25.095	263	155	8	43	300	47	272	4.44e-14	73.6
MS.gene39623.t1	AT1G60000	32.450	151	95	4	46	196	114	257	1.44e-13	70.5
MS.gene39623.t1	AT3G04500	41.558	77	44	1	113	189	135	210	1.68e-13	70.1
MS.gene39623.t1	AT3G52380	27.950	161	106	3	43	196	142	299	1.54e-12	68.2
MS.gene39623.t1	AT4G13850	41.772	79	45	1	117	195	37	114	2.06e-12	64.3
MS.gene39623.t1	AT1G07360	37.255	102	60	2	227	327	220	318	2.17e-12	68.6
MS.gene39623.t1	AT4G13850	40.741	81	47	1	117	197	37	116	2.78e-12	64.3
MS.gene39623.t1	AT2G18510	27.389	157	103	3	43	199	51	196	3.00e-12	67.4
MS.gene39623.t1	AT4G13850	40.741	81	47	1	117	197	37	116	3.37e-12	64.3
MS.gene39623.t1	AT4G13850	40.741	81	47	1	117	197	37	116	3.74e-12	64.3
MS.gene39623.t1	AT2G36660	23.922	255	163	7	43	292	138	366	4.27e-12	67.8
MS.gene39623.t1	AT2G37220	28.571	203	122	5	112	303	88	278	5.40e-12	66.2
MS.gene39623.t1	AT3G13224	26.946	167	112	5	42	207	44	201	1.23e-11	65.5
MS.gene39623.t1	AT3G13224	26.946	167	112	5	42	207	35	192	1.64e-11	65.1
MS.gene39623.t1	AT4G26650	26.108	203	124	7	105	295	4	192	1.95e-11	65.5
MS.gene39623.t1	AT2G29580	34.314	102	66	1	227	327	220	321	2.11e-11	65.5
MS.gene39623.t1	AT4G26650	26.263	198	120	7	110	295	6	189	3.82e-11	64.7
MS.gene39623.t1	AT1G58470	28.492	179	114	7	117	288	8	179	7.44e-11	63.2
MS.gene39623.t1	AT1G58470	28.492	179	114	7	117	288	8	179	7.44e-11	63.2

Find 91 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAATGCTGAGGAAGCAATTC+AGG	0.256444	4.2:-24438810	MS.gene39623:CDS
CGAAACGCCTGATCGGTATT+TGG	0.263962	4.2:+24440831	None:intergenic
ATCAGGCGTTTCGTCTGAAT+TGG	0.276433	4.2:-24440821	MS.gene39623:CDS
ACTGGTCAATCGGAGGGATA+TGG	0.328591	4.2:-24440921	MS.gene39623:CDS
GGATATGGTGGCCATGGATA+TGG	0.328731	4.2:-24438229	MS.gene39623:CDS
AGCAGACAGTGCGTCTTTCT+TGG	0.329108	4.2:-24438763	MS.gene39623:CDS
AAACTCACATGCTTATTTCC+TGG	0.336224	4.2:+24438731	None:intergenic
GCAGACAGTGCGTCTTTCTT+GGG	0.339350	4.2:-24438762	MS.gene39623:CDS
GGTTATGGAGGTCATGGATA+TGG	0.355121	4.2:-24438244	MS.gene39623:CDS
CTCTGTATTTGTGGGAGACT+TGG	0.355245	4.2:-24440736	MS.gene39623:CDS
CCCTTCAGATTGGGAACCTT+GGG	0.361796	4.2:+24439390	None:intergenic
CAACCTGCTGCTGCAGTTCA+AGG	0.372082	4.2:-24438163	MS.gene39623:CDS
ATCTGATCTCTCTGTATTTG+TGG	0.372937	4.2:-24440745	MS.gene39623:CDS
AGGAATGACTCTAATGGTTA+TGG	0.376637	4.2:-24438259	MS.gene39623:CDS
TCTGATCTCTCTGTATTTGT+GGG	0.395306	4.2:-24440744	MS.gene39623:CDS
TCAGGCGTTTCGTCTGAATT+GGG	0.404528	4.2:-24440820	MS.gene39623:CDS
TATCTGTTGCAGATATTTGT+TGG	0.405468	4.2:-24439283	MS.gene39623:intron
CATAGCATCAGTAACATCTA+TGG	0.413758	4.2:+24440713	None:intergenic
ATATGCTGCTAGACAAAATC+AGG	0.422308	4.2:-24438197	MS.gene39623:CDS
CCCCTTCAGATTGGGAACCT+TGG	0.423023	4.2:+24439389	None:intergenic
GGATTGAATGGAACAGTGAT+TGG	0.427017	4.2:-24438788	MS.gene39623:CDS
ACCTTGGGCCACAGCACCAT+TGG	0.430193	4.2:+24439405	None:intergenic
GTCATACGTAATAAGCAAAC+TGG	0.435726	4.2:-24440939	MS.gene39623:CDS
GTTAGAATCCCCTTCAGATT+GGG	0.438640	4.2:+24439381	None:intergenic
CTTTCTTGGGGTCGCAGTCC+AGG	0.447144	4.2:-24438749	MS.gene39623:CDS
GGCTTATGTGCAGGTTGTAT+CGG	0.450307	4.2:-24440967	MS.gene39623:intron
GTGAAAATCCCAGTCGGTAA+AGG	0.454342	4.2:-24439190	MS.gene39623:CDS
TCTAATACTGGTCGTTCAAA+AGG	0.454872	4.2:-24440630	MS.gene39623:CDS
TGTTAGAATCCCCTTCAGAT+TGG	0.468873	4.2:+24439380	None:intergenic
ACATTCAGCGCTGCTGGTGG+TGG	0.474235	4.2:-24440795	MS.gene39623:CDS
TTCAGCGCTGCTGGTGGTGG+TGG	0.480349	4.2:-24440792	MS.gene39623:CDS
GAAGCAATTCAGGGATTGAA+TGG	0.482531	4.2:-24438800	MS.gene39623:CDS
TGGGCTACATTCAGCGCTGC+TGG	0.483566	4.2:-24440801	MS.gene39623:CDS
GCCCCTTGAACTGCAGCAGC+AGG	0.483606	4.2:+24438160	None:intergenic
ACCTGCTGCTGCAGTTCAAG+GGG	0.488826	4.2:-24438161	MS.gene39623:CDS
AACCTGCTGCTGCAGTTCAA+GGG	0.491545	4.2:-24438162	MS.gene39623:CDS
ATGGCGTTTATTGTTCTAGC+AGG	0.496066	4.2:-24440548	MS.gene39623:CDS
TAATAAGCAAACTGGTCAAT+CGG	0.501480	4.2:-24440931	MS.gene39623:CDS
AAAGTCTTGCAGAACTTCAA+TGG	0.502491	4.2:-24440864	MS.gene39623:CDS
GTAGTGTTGGCTGGTGGCGG+TGG	0.503654	4.2:-24439433	MS.gene39623:CDS
TCTTAAACTAGCTGTAGTGT+TGG	0.504172	4.2:-24439446	MS.gene39623:intron
AAACTAGCTGTAGTGTTGGC+TGG	0.505517	4.2:-24439442	MS.gene39623:intron
TCTAATGGTTATGGAGGTCA+TGG	0.506688	4.2:-24438250	MS.gene39623:CDS
GTTGTCATTGACTCTAATAC+TGG	0.511139	4.2:-24440642	MS.gene39623:CDS
TAATGATGAGGATGAACATA+AGG	0.511533	4.2:+24441911	None:intergenic
TCCAATGGTGCTGTGGCCCA+AGG	0.516661	4.2:-24439406	MS.gene39623:CDS
AAACCACATCCTTTACCGAC+TGG	0.519643	4.2:+24439181	None:intergenic
TATGATGCCAAATACCGATC+AGG	0.523250	4.2:-24440838	MS.gene39623:CDS
ACTGGTCGTTCAAAAGGCTA+TGG	0.525221	4.2:-24440624	MS.gene39623:CDS
AACCACATCCTTTACCGACT+GGG	0.528514	4.2:+24439182	None:intergenic
TTGCTTATTACGTATGACCT+TGG	0.529532	4.2:+24440944	None:intergenic
CTGTTGCAGATATTTGTTGG+AGG	0.534128	4.2:-24439280	MS.gene39623:intron
GGTCATGGATATGGTGGCCA+TGG	0.539115	4.2:-24438235	MS.gene39623:CDS
ATCCATTACTTCCATATCCA+TGG	0.539208	4.2:+24438218	None:intergenic
CAGTGGAGGAATGACTCTAA+TGG	0.541519	4.2:-24438265	MS.gene39623:CDS
ATCCCAGTCGGTAAAGGATG+TGG	0.548381	4.2:-24439184	MS.gene39623:CDS
CCTTGCGAAGAATATTGTTG+TGG	0.552246	4.2:+24440480	None:intergenic
GGCCATGGATATGGAAGTAA+TGG	0.553720	4.2:-24438220	MS.gene39623:CDS
GCTGTAGTGTTGGCTGGTGG+CGG	0.557579	4.2:-24439436	MS.gene39623:CDS
GCCCAAGGTTCCCAATCTGA+AGG	0.557760	4.2:-24439391	MS.gene39623:CDS
CCACAACAATATTCTTCGCA+AGG	0.559021	4.2:-24440480	MS.gene39623:intron
AATGCTGAGGAAGCAATTCA+GGG	0.562076	4.2:-24438809	MS.gene39623:CDS
ATTCAGACGAAACGCCTGAT+CGG	0.563201	4.2:+24440824	None:intergenic
ATCATAGCCATAGCAGTAGC+TGG	0.566838	4.2:+24441971	None:intergenic
CTGCTGGTGGTGGTGGCGAG+AGG	0.574050	4.2:-24440785	MS.gene39623:CDS
GGTGGCGGTGGACACTCCAA+TGG	0.577143	4.2:-24439421	MS.gene39623:CDS
AGAGCAATGACTGAAATGAA+TGG	0.587516	4.2:-24440567	MS.gene39623:CDS
CAGTTCAAGGGGCTTCCTAA+CGG	0.591153	4.2:-24438150	None:intergenic
GACACTTGCTGTTGATGAGG+TGG	0.591335	4.2:+24441878	None:intergenic
CCCAAGGTTCCCAATCTGAA+GGG	0.591408	4.2:-24439390	MS.gene39623:CDS
GCAGTATCCAGCTACTGCTA+TGG	0.591918	4.2:-24441978	MS.gene39623:CDS
CGAGTTCTACACGCGAGCAA+TGG	0.593845	4.2:-24440892	MS.gene39623:CDS
AAGCAAACTGGTCAATCGGA+GGG	0.598971	4.2:-24440927	MS.gene39623:CDS
CAGACAGTGCGTCTTTCTTG+GGG	0.601300	4.2:-24438761	MS.gene39623:CDS
TGGACACTCCAATGGTGCTG+TGG	0.602089	4.2:-24439413	MS.gene39623:CDS
TGTGCAGGTTGTATCGGCCA+AGG	0.610498	4.2:-24440961	MS.gene39623:intron
GGCGACACTTGCTGTTGATG+AGG	0.611155	4.2:+24441875	None:intergenic
GGTTTGGTGATGAAAGTGAA+AGG	0.613030	4.2:-24440593	MS.gene39623:CDS
TAAGCAAACTGGTCAATCGG+AGG	0.614770	4.2:-24440928	MS.gene39623:CDS
ATCTCTGTGAAAATCCCAGT+CGG	0.624783	4.2:-24439196	MS.gene39623:CDS
AATGACTCTAATGGTTATGG+AGG	0.625005	4.2:-24438256	MS.gene39623:CDS
TCTAGCAGGCCTATGCGAGT+AGG	0.628642	4.2:-24440534	MS.gene39623:CDS
GCTACATTCAGCGCTGCTGG+TGG	0.629809	4.2:-24440798	MS.gene39623:CDS
TATGGAGGTCATGGATATGG+TGG	0.629902	4.2:-24438241	MS.gene39623:CDS
CCAAGGTTCCCAATCTGAAG+GGG	0.630101	4.2:-24439389	MS.gene39623:CDS
GTTGCAACACCTACTCGCAT+AGG	0.642755	4.2:+24440525	None:intergenic
GGCTGCTGCTGATAATGATG+AGG	0.650096	4.2:+24441899	None:intergenic
ATGTTACAGAAAGAATGCTG+AGG	0.670854	4.2:-24438822	MS.gene39623:intron
ACATAAGGCATATAATGCTG+AGG	0.677746	4.2:+24441926	None:intergenic
CTAGCTGTAGTGTTGGCTGG+TGG	0.692590	4.2:-24439439	MS.gene39623:intron
TGACTCTGACATTAGTGACG+AGG	0.696799	4.2:-24439254	MS.gene39623:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATATTTAATAAACATCTA+TGG	+	chr4.2:24440126-24440145	None:intergenic	10.0%
!!!	GGAAATTTTATAAAATAATT+TGG	+	chr4.2:24441650-24441669	None:intergenic	10.0%
!!	AAAGTATAACTATCTTATAT+GGG	+	chr4.2:24438868-24438887	None:intergenic	15.0%
!!	AAAGTTAAAACATTTAATCA+AGG	+	chr4.2:24438713-24438732	None:intergenic	15.0%
!!!	AAAAGTATAACTATCTTATA+TGG	+	chr4.2:24438869-24438888	None:intergenic	15.0%
!!!	AAATTTTCATTATAACTGAA+AGG	-	chr4.2:24439741-24439760	MS.gene39623:intron	15.0%
!!!	AGTTTCTGTTTTTATATAAA+TGG	-	chr4.2:24438553-24438572	MS.gene39623:intron	15.0%
!!!	ATATAAGATAGTTATACTTT+TGG	-	chr4.2:24438868-24438887	MS.gene39623:intron	15.0%
!!	AAAAATAAGACGATACATAT+TGG	+	chr4.2:24441253-24441272	None:intergenic	20.0%
!!	AACATTCAATAAATAGATTG+AGG	+	chr4.2:24440462-24440481	None:intergenic	20.0%
!!	AATATCCTACAATACATTAT+TGG	+	chr4.2:24439036-24439055	None:intergenic	20.0%
!!	ACAAAGAATTAAATTAGAGA+TGG	+	chr4.2:24441847-24441866	None:intergenic	20.0%
!!	ACGACAATAAAAAAAAAGTT+TGG	+	chr4.2:24439121-24439140	None:intergenic	20.0%
!!	ATGATATAAGATTACTTGAT+TGG	+	chr4.2:24441815-24441834	None:intergenic	20.0%
!!	CAGTGATTAATTAAATCAAA+AGG	+	chr4.2:24438677-24438696	None:intergenic	20.0%
!!	GTAAATATCATATTTGTTTC+TGG	-	chr4.2:24440000-24440019	MS.gene39623:intron	20.0%
!!!	AAAAGTGAGAATTCATTTTA+GGG	+	chr4.2:24441778-24441797	None:intergenic	20.0%
!!!	AGCAAATTTTCATCTATTAA+GGG	-	chr4.2:24439467-24439486	MS.gene39623:intron	20.0%
!!!	GGCAGAAAAATTAATTTTTA+TGG	-	chr4.2:24440548-24440567	MS.gene39623:CDS	20.0%
!!!	TAAAAATTAATTTTTCTGCC+TGG	+	chr4.2:24440548-24440567	None:intergenic	20.0%
!!!	TAAAAGTGAGAATTCATTTT+AGG	+	chr4.2:24441779-24441798	None:intergenic	20.0%
!!!	TAGCAAATTTTCATCTATTA+AGG	-	chr4.2:24439466-24439485	MS.gene39623:intron	20.0%
!!!	TTAATTGCACTTTGAAAAAT+GGG	-	chr4.2:24438987-24439006	MS.gene39623:intron	20.0%
!!!	TTGTTGTTATATTTTCACTT+TGG	-	chr4.2:24441453-24441472	MS.gene39623:intron	20.0%
!!!	TTTGATTTAATTAATCACTG+AGG	-	chr4.2:24438677-24438696	MS.gene39623:intron	20.0%
!!!	TTTGATTTGAGATTGATTTA+AGG	-	chr4.2:24438649-24438668	MS.gene39623:intron	20.0%
!	ATTGGACTCTTTAATGAATT+AGG	-	chr4.2:24438786-24438805	MS.gene39623:CDS	25.0%
!	ATTTATTGCTGGAAGTTATT+AGG	-	chr4.2:24438581-24438600	MS.gene39623:intron	25.0%
!	GACTTCATAATCAAAATCTA+AGG	+	chr4.2:24441756-24441775	None:intergenic	25.0%
!	TATGCATGAATATTTGTTTC+TGG	-	chr4.2:24440095-24440114	MS.gene39623:intron	25.0%
!	TTAAATCTCATATTTGTTCC+TGG	-	chr4.2:24440265-24440284	MS.gene39623:intron	25.0%
!	TTGGACTCTTTAATGAATTA+GGG	-	chr4.2:24438787-24438806	MS.gene39623:CDS	25.0%
!	TTTATTGCTGGAAGTTATTA+GGG	-	chr4.2:24438582-24438601	MS.gene39623:intron	25.0%
!	TTTGTCCAATAATGTATTGT+AGG	-	chr4.2:24439028-24439047	MS.gene39623:intron	25.0%
!!	ATCTTTTTGTGTGTGATTAT+TGG	-	chr4.2:24438768-24438787	MS.gene39623:CDS	25.0%
!!	CTTAATTGCACTTTGAAAAA+TGG	-	chr4.2:24438986-24439005	MS.gene39623:intron	25.0%
!!	TAATTGCACTTTGAAAAATG+GGG	-	chr4.2:24438988-24439007	MS.gene39623:intron	25.0%
!!	TTCTTTTGATATCTCAGTAA+CGG	-	chr4.2:24440832-24440851	MS.gene39623:CDS	25.0%
!!	TTTTCATTATAACTGAAAGG+AGG	-	chr4.2:24439744-24439763	MS.gene39623:intron	25.0%
!!!	GTGCATATCTATTTTTATGT+TGG	-	chr4.2:24439836-24439855	MS.gene39623:intron	25.0%
	AAAGTGCAATTAAGAGATCT+AGG	+	chr4.2:24438980-24438999	None:intergenic	30.0%
	AACAGTATACATCATGAGAT+AGG	+	chr4.2:24440407-24440426	None:intergenic	30.0%
	AACCAGGGAATTGAATTATT+AGG	+	chr4.2:24439771-24439790	None:intergenic	30.0%
	ACATCACCAAATTGCAAAAA+TGG	+	chr4.2:24440922-24440941	None:intergenic	30.0%
	ACGATCTATATCTATGCTAA+GGG	+	chr4.2:24441017-24441036	None:intergenic	30.0%
	AGCACACTTACAAATAAAAC+AGG	+	chr4.2:24439906-24439925	None:intergenic	30.0%
	ATAGTAATATCAATCCAACC+AGG	+	chr4.2:24439787-24439806	None:intergenic	30.0%
	GCAAGTCTAGTTAAAAACAT+TGG	+	chr4.2:24438946-24438965	None:intergenic	30.0%
	GTATGATGAATAAATCGAAG+TGG	-	chr4.2:24439880-24439899	MS.gene39623:intron	30.0%
	GTTAAAAACATTGGTCAACA+AGG	+	chr4.2:24438937-24438956	None:intergenic	30.0%
	GTTATGCATGAATTCAAACA+TGG	-	chr4.2:24440069-24440088	MS.gene39623:intron	30.0%
	TAATAAGCAAACTGGTCAAT+CGG	-	chr4.2:24439208-24439227	MS.gene39623:CDS	30.0%
	TAATAATTCAATTCCCTGGT+TGG	-	chr4.2:24439770-24439789	MS.gene39623:intron	30.0%
	TAATGATGAGGATGAACATA+AGG	+	chr4.2:24438231-24438250	None:intergenic	30.0%
	TACGATCTATATCTATGCTA+AGG	+	chr4.2:24441018-24441037	None:intergenic	30.0%
	TAGTAATATCAATCCAACCA+GGG	+	chr4.2:24439786-24439805	None:intergenic	30.0%
	TATCTGTTGCAGATATTTGT+TGG	-	chr4.2:24440856-24440875	MS.gene39623:CDS	30.0%
	TGCAAGGAAATATAACAAAG+TGG	+	chr4.2:24440363-24440382	None:intergenic	30.0%
	TTAGTACACAAACTTAGAAC+AGG	+	chr4.2:24441525-24441544	None:intergenic	30.0%
	TTGACTCTTGTGATTTAAGT+TGG	-	chr4.2:24438817-24438836	MS.gene39623:intron	30.0%
	TTGGTCATAAATGCGATAAT+CGG	+	chr4.2:24439102-24439121	None:intergenic	30.0%
!	AAATGGTCTTGATTTATTGC+TGG	-	chr4.2:24438570-24438589	MS.gene39623:intron	30.0%
!	TGACTTTTCAATACAAGTCT+TGG	-	chr4.2:24439948-24439967	MS.gene39623:intron	30.0%
!	TTTTATTGTCGTCTTCTGAT+TGG	-	chr4.2:24439129-24439148	MS.gene39623:intron	30.0%
!!	AGACAACCATTTTTGCAATT+TGG	-	chr4.2:24440913-24440932	MS.gene39623:CDS	30.0%
!!!	GGATTGCCATAAGTTTTTTT+GGG	+	chr4.2:24439641-24439660	None:intergenic	30.0%
!!!	GTATCGTCTTATTTTTGACT+GGG	-	chr4.2:24441257-24441276	MS.gene39623:intron	30.0%
!!!	GTTTGTTGATGTTTTTTCGT+TGG	-	chr4.2:24439151-24439170	MS.gene39623:intron	30.0%
!!!	TGGATTGCCATAAGTTTTTT+TGG	+	chr4.2:24439642-24439661	None:intergenic	30.0%
!!!	TGTATCGTCTTATTTTTGAC+TGG	-	chr4.2:24441256-24441275	MS.gene39623:intron	30.0%
	AAACTCACATGCTTATTTCC+TGG	+	chr4.2:24441411-24441430	None:intergenic	35.0%
	AAAGTCTTGCAGAACTTCAA+TGG	-	chr4.2:24439275-24439294	MS.gene39623:intron	35.0%
	AAGTATTCCTCAAAGGGATA+GGG	-	chr4.2:24441106-24441125	MS.gene39623:intron	35.0%
	AATGACTCTAATGGTTATGG+AGG	-	chr4.2:24441883-24441902	MS.gene39623:CDS	35.0%
	ACATAAGGCATATAATGCTG+AGG	+	chr4.2:24438216-24438235	None:intergenic	35.0%
	AGAATCTTGAATGCATAACC+AGG	-	chr4.2:24440527-24440546	MS.gene39623:CDS	35.0%
	AGAGCAATGACTGAAATGAA+TGG	-	chr4.2:24439572-24439591	MS.gene39623:intron	35.0%
	AGCGCACTTACAAATAAAAC+AGG	+	chr4.2:24440174-24440193	None:intergenic	35.0%
	AGGAATGACTCTAATGGTTA+TGG	-	chr4.2:24441880-24441899	MS.gene39623:intron	35.0%
	ATACATCATGAGATAGGCAA+GGG	+	chr4.2:24440401-24440420	None:intergenic	35.0%
	ATATGCTGCTAGACAAAATC+AGG	-	chr4.2:24441942-24441961	MS.gene39623:CDS	35.0%
	ATCCATTACTTCCATATCCA+TGG	+	chr4.2:24441924-24441943	None:intergenic	35.0%
	ATCTGATCTCTCTGTATTTG+TGG	-	chr4.2:24439394-24439413	MS.gene39623:CDS	35.0%
	ATGAAGAGTTGGCATAATCA+AGG	+	chr4.2:24441135-24441154	None:intergenic	35.0%
	ATGTTACAGAAAGAATGCTG+AGG	-	chr4.2:24441317-24441336	MS.gene39623:intron	35.0%
	CATAGCATCAGTAACATCTA+TGG	+	chr4.2:24439429-24439448	None:intergenic	35.0%
	GCAACACCCAAAAAAACTTA+TGG	-	chr4.2:24439632-24439651	MS.gene39623:intron	35.0%
	GTCATACGTAATAAGCAAAC+TGG	-	chr4.2:24439200-24439219	MS.gene39623:CDS	35.0%
	GTCCTAATAATTCAATTCCC+TGG	-	chr4.2:24439766-24439785	MS.gene39623:intron	35.0%
	TAAGTATTCCTCAAAGGGAT+AGG	-	chr4.2:24441105-24441124	MS.gene39623:intron	35.0%
	TATACATCATGAGATAGGCA+AGG	+	chr4.2:24440402-24440421	None:intergenic	35.0%
	TCTAATACTGGTCGTTCAAA+AGG	-	chr4.2:24439509-24439528	MS.gene39623:intron	35.0%
	TCTGATCTCTCTGTATTTGT+GGG	-	chr4.2:24439395-24439414	MS.gene39623:CDS	35.0%
	TCTGTAACATAAAGAGCAGA+AGG	+	chr4.2:24441307-24441326	None:intergenic	35.0%
	TCTTAAACTAGCTGTAGTGT+TGG	-	chr4.2:24440693-24440712	MS.gene39623:CDS	35.0%
	TGGCATAAGTATTCCTCAAA+GGG	-	chr4.2:24441100-24441119	MS.gene39623:intron	35.0%
	TTGCTTATTACGTATGACCT+TGG	+	chr4.2:24439198-24439217	None:intergenic	35.0%
	TTTCACTTTGGCCATCTAAT+GGG	-	chr4.2:24441465-24441484	MS.gene39623:intron	35.0%
!	ATGCTGAAGGTATATGAATG+CGG	+	chr4.2:24441671-24441690	None:intergenic	35.0%
!	CTCGTAATTTTCCCATTAGA+TGG	+	chr4.2:24441479-24441498	None:intergenic	35.0%
!	TATACTTTTGGTACCCTAAG+TGG	-	chr4.2:24438880-24438899	MS.gene39623:intron	35.0%
!	TGGTTTCCTTTTTCTATCCT+TGG	-	chr4.2:24438837-24438856	MS.gene39623:intron	35.0%
!	TTTTCACTTTGGCCATCTAA+TGG	-	chr4.2:24441464-24441483	MS.gene39623:intron	35.0%
!!	GTTGTCATTGACTCTAATAC+TGG	-	chr4.2:24439497-24439516	MS.gene39623:intron	35.0%
!!	TTCCTGGCTTTATGCATTAA+TGG	-	chr4.2:24440281-24440300	MS.gene39623:intron	35.0%
!!!	CAAAAGGCTATGGTTTTGTT+AGG	-	chr4.2:24439525-24439544	MS.gene39623:intron	35.0%
	AATGCTGAGGAAGCAATTCA+GGG	-	chr4.2:24441330-24441349	MS.gene39623:intron	40.0%
	AATTCTTTGTGATGTCGCAG+TGG	-	chr4.2:24441857-24441876	MS.gene39623:intron	40.0%
	AGCAACTAGTTACATGCTGA+AGG	+	chr4.2:24441684-24441703	None:intergenic	40.0%
	ATCTCTGTGAAAATCCCAGT+CGG	-	chr4.2:24440943-24440962	MS.gene39623:CDS	40.0%
	ATCTTATATGGGCAATGCCA+AGG	+	chr4.2:24438857-24438876	None:intergenic	40.0%
	ATGGCGTTTATTGTTCTAGC+AGG	-	chr4.2:24439591-24439610	MS.gene39623:intron	40.0%
	CAATGTCTAAGCGTCAAAGT+CGG	+	chr4.2:24439079-24439098	None:intergenic	40.0%
	CATAACTGCTTTGCTCATAC+TGG	-	chr4.2:24438426-24438445	MS.gene39623:intron	40.0%
	CCACAACAATATTCTTCGCA+AGG	-	chr4.2:24439659-24439678	MS.gene39623:intron	40.0%
	CCTTGCGAAGAATATTGTTG+TGG	+	chr4.2:24439662-24439681	None:intergenic	40.0%
	GAAGCAATTCAGGGATTGAA+TGG	-	chr4.2:24441339-24441358	MS.gene39623:intron	40.0%
	GAATAGATTCAAGTGGTGCA+AGG	+	chr4.2:24440379-24440398	None:intergenic	40.0%
	GCAATGCCAAGGATAGAAAA+AGG	+	chr4.2:24438846-24438865	None:intergenic	40.0%
	GGATTGAATGGAACAGTGAT+TGG	-	chr4.2:24441351-24441370	MS.gene39623:intron	40.0%
	GTCCATTAATGCATAAAGCC+AGG	+	chr4.2:24440286-24440305	None:intergenic	40.0%
	GTGGCATAAGTATTCCTCAA+AGG	-	chr4.2:24441099-24441118	MS.gene39623:intron	40.0%
	GTTAGAATCCCCTTCAGATT+GGG	+	chr4.2:24440761-24440780	None:intergenic	40.0%
	GTTTCTTGCGAAATGAACAG+TGG	-	chr4.2:24441080-24441099	MS.gene39623:intron	40.0%
	TAACACGAGAGAGTTATCAC+TGG	-	chr4.2:24440611-24440630	MS.gene39623:CDS	40.0%
	TATGATGCCAAATACCGATC+AGG	-	chr4.2:24439301-24439320	MS.gene39623:intron	40.0%
	TCATCCTGTGGAATCATGTA+AGG	-	chr4.2:24441151-24441170	MS.gene39623:intron	40.0%
	TCATCCTTACATGATTCCAC+AGG	+	chr4.2:24441158-24441177	None:intergenic	40.0%
	TCTAATGGTTATGGAGGTCA+TGG	-	chr4.2:24441889-24441908	MS.gene39623:CDS	40.0%
	TCTCATCCATCCAATGATGA+AGG	+	chr4.2:24438398-24438417	None:intergenic	40.0%
	TGTGGAATCATGTAAGGATG+AGG	-	chr4.2:24441157-24441176	MS.gene39623:intron	40.0%
	TGTTAGAATCCCCTTCAGAT+TGG	+	chr4.2:24440762-24440781	None:intergenic	40.0%
	TTTCGGCCTTCAAAACTCTA+GGG	+	chr4.2:24438908-24438927	None:intergenic	40.0%
!	CTGTTGCAGATATTTGTTGG+AGG	-	chr4.2:24440859-24440878	MS.gene39623:CDS	40.0%
!	GGTCAACAAGGTCACATTTT+CGG	+	chr4.2:24438925-24438944	None:intergenic	40.0%
!	TGAAGTATCTGCAGCAGAAA+AGG	+	chr4.2:24439722-24439741	None:intergenic	40.0%
!	TTTTCGGCCTTCAAAACTCT+AGG	+	chr4.2:24438909-24438928	None:intergenic	40.0%
!!	AAGGTTGGTGCTGATTTAAG+TGG	+	chr4.2:24439703-24439722	None:intergenic	40.0%
!!	GGTTTGGTGATGAAAGTGAA+AGG	-	chr4.2:24439546-24439565	MS.gene39623:intron	40.0%
!!!	GGCTATGGTTTTGTTAGGTT+TGG	-	chr4.2:24439530-24439549	MS.gene39623:intron	40.0%
!!!	GTTTTGTTCAACTTGCTGAC+AGG	-	chr4.2:24440977-24440996	MS.gene39623:intron	40.0%
!!!	TCGTCTTATTTTTGACTGGG+TGG	-	chr4.2:24441260-24441279	MS.gene39623:intron	40.0%
!!!	TTTTTCGTTGGCTTATGTGC+AGG	-	chr4.2:24439163-24439182	MS.gene39623:CDS	40.0%
	AAACCACATCCTTTACCGAC+TGG	+	chr4.2:24440961-24440980	None:intergenic	45.0%
	AAGCAAACTGGTCAATCGGA+GGG	-	chr4.2:24439212-24439231	MS.gene39623:CDS	45.0%
	AAGGATTCCCTATCCCTTTG+AGG	+	chr4.2:24441116-24441135	None:intergenic	45.0%
	ACACAACTGTGAGTCTGCTT+TGG	-	chr4.2:24440782-24440801	MS.gene39623:CDS	45.0%
	ACTGGTCGTTCAAAAGGCTA+TGG	-	chr4.2:24439515-24439534	MS.gene39623:intron	45.0%
	ATCAGGCGTTTCGTCTGAAT+TGG	-	chr4.2:24439318-24439337	MS.gene39623:intron	45.0%
	ATCATAGCCATAGCAGTAGC+TGG	+	chr4.2:24438171-24438190	None:intergenic	45.0%
	ATTCAGACGAAACGCCTGAT+CGG	+	chr4.2:24439318-24439337	None:intergenic	45.0%
	CAGTGGAGGAATGACTCTAA+TGG	-	chr4.2:24441874-24441893	MS.gene39623:intron	45.0%
	CTCTGTATTTGTGGGAGACT+TGG	-	chr4.2:24439403-24439422	MS.gene39623:CDS	45.0%
	GAATGCTGAGGAAGCAATTC+AGG	-	chr4.2:24441329-24441348	MS.gene39623:intron	45.0%
	GATTCCACAGGATGAAGAGT+TGG	+	chr4.2:24441146-24441165	None:intergenic	45.0%
	GCTGATATTGATGCTGCTGA+TGG	+	chr4.2:24438320-24438339	None:intergenic	45.0%
	GCTGGAAGTTATTAGGGTAC+AGG	-	chr4.2:24438588-24438607	MS.gene39623:intron	45.0%
	GGCAAGGGAATAGATTCAAG+TGG	+	chr4.2:24440386-24440405	None:intergenic	45.0%
	GGCCATGGATATGGAAGTAA+TGG	-	chr4.2:24441919-24441938	MS.gene39623:CDS	45.0%
	GGCTTATGTGCAGGTTGTAT+CGG	-	chr4.2:24439172-24439191	MS.gene39623:CDS	45.0%
	GGTTATGGAGGTCATGGATA+TGG	-	chr4.2:24441895-24441914	MS.gene39623:CDS	45.0%
	GTATCTGCAGCAGAAAAGGT+TGG	+	chr4.2:24439718-24439737	None:intergenic	45.0%
	GTCTCGTTCTCTCTGTAATC+AGG	-	chr4.2:24441498-24441517	MS.gene39623:intron	45.0%
	GTGAAAATCCCAGTCGGTAA+AGG	-	chr4.2:24440949-24440968	MS.gene39623:CDS	45.0%
	TAAGCAAACTGGTCAATCGG+AGG	-	chr4.2:24439211-24439230	MS.gene39623:CDS	45.0%
	TATGCCAACTCTTCATCCTG+TGG	-	chr4.2:24441139-24441158	MS.gene39623:intron	45.0%
	TATGGAGGTCATGGATATGG+TGG	-	chr4.2:24441898-24441917	MS.gene39623:CDS	45.0%
	TCAGGCGTTTCGTCTGAATT+GGG	-	chr4.2:24439319-24439338	MS.gene39623:intron	45.0%
	TGACTCTGACATTAGTGACG+AGG	-	chr4.2:24440885-24440904	MS.gene39623:CDS	45.0%
	TGGTGACCTTCATCATTGGA+TGG	-	chr4.2:24438389-24438408	MS.gene39623:intron	45.0%
	TTCGGCCTTCAAAACTCTAG+GGG	+	chr4.2:24438907-24438926	None:intergenic	45.0%
!	AAAACTCTAGGGGACCACTT+AGG	+	chr4.2:24438897-24438916	None:intergenic	45.0%
!	AAACTCTAGGGGACCACTTA+GGG	+	chr4.2:24438896-24438915	None:intergenic	45.0%
!	AACCACATCCTTTACCGACT+GGG	+	chr4.2:24440960-24440979	None:intergenic	45.0%
!!	AAACTAGCTGTAGTGTTGGC+TGG	-	chr4.2:24440697-24440716	MS.gene39623:CDS	45.0%
	AACCTGCTGCTGCAGTTCAA+GGG	-	chr4.2:24441977-24441996	MS.gene39623:CDS	50.0%
	ACTGGTCAATCGGAGGGATA+TGG	-	chr4.2:24439218-24439237	MS.gene39623:CDS	50.0%
	AGCAGACAGTGCGTCTTTCT+TGG	-	chr4.2:24441376-24441395	MS.gene39623:intron	50.0%
	ATCCCAGTCGGTAAAGGATG+TGG	-	chr4.2:24440955-24440974	MS.gene39623:CDS	50.0%
	CAGACAGTGCGTCTTTCTTG+GGG	-	chr4.2:24441378-24441397	MS.gene39623:intron	50.0%
	CAGATCGTCCTGATCTCTTC+AGG	+	chr4.2:24438366-24438385	None:intergenic	50.0%
	CCAAGGTTCCCAATCTGAAG+GGG	-	chr4.2:24440750-24440769	MS.gene39623:CDS	50.0%
	CCCAAGGTTCCCAATCTGAA+GGG	-	chr4.2:24440749-24440768	MS.gene39623:CDS	50.0%
	CCCTTCAGATTGGGAACCTT+GGG	+	chr4.2:24440752-24440771	None:intergenic	50.0%
	CGAAACGCCTGATCGGTATT+TGG	+	chr4.2:24439311-24439330	None:intergenic	50.0%
	CTGAAGAGATCAGGACGATC+TGG	-	chr4.2:24438364-24438383	MS.gene39623:intron	50.0%
	CTGCTTTGCTCATACTGGAG+AGG	-	chr4.2:24438431-24438450	MS.gene39623:intron	50.0%
	CTTGCTGACAGGTACACTTG+TGG	-	chr4.2:24440988-24441007	MS.gene39623:intron	50.0%
	GCAGACAGTGCGTCTTTCTT+GGG	-	chr4.2:24441377-24441396	MS.gene39623:intron	50.0%
	GCAGTATCCAGCTACTGCTA+TGG	-	chr4.2:24438161-24438180	MS.gene39623:CDS	50.0%
	GGATATGGTGGCCATGGATA+TGG	-	chr4.2:24441910-24441929	MS.gene39623:CDS	50.0%
	GTTGCAACACCTACTCGCAT+AGG	+	chr4.2:24439617-24439636	None:intergenic	50.0%
	TCTTTGTGATGTCGCAGTGG+AGG	-	chr4.2:24441860-24441879	MS.gene39623:intron	50.0%
!	GGCTGCTGCTGATAATGATG+AGG	+	chr4.2:24438243-24438262	None:intergenic	50.0%
!!	GACACTTGCTGTTGATGAGG+TGG	+	chr4.2:24438264-24438283	None:intergenic	50.0%
!!	GGCTTGGTGACCTTCATCAT+TGG	-	chr4.2:24438385-24438404	MS.gene39623:intron	50.0%
!!	GTGGTCCCCTAGAGTTTTGA+AGG	-	chr4.2:24438899-24438918	MS.gene39623:intron	50.0%
	ACCTGCTGCTGCAGTTCAAG+GGG	-	chr4.2:24441978-24441997	MS.gene39623:CDS	55.0%
	ACGGGGCATAGTCATCATGG+AGG	-	chr4.2:24438294-24438313	MS.gene39623:intron	55.0%
	CAACCTGCTGCTGCAGTTCA+AGG	-	chr4.2:24441976-24441995	MS.gene39623:CDS	55.0%
	CCATGATGACTATGCCCCGT+CGG	+	chr4.2:24438294-24438313	None:intergenic	55.0%
	CCCCTTCAGATTGGGAACCT+TGG	+	chr4.2:24440753-24440772	None:intergenic	55.0%
	CGAGTTCTACACGCGAGCAA+TGG	-	chr4.2:24439247-24439266	MS.gene39623:CDS	55.0%
	GAGATCAGGACGATCTGGCT+TGG	-	chr4.2:24438369-24438388	MS.gene39623:intron	55.0%
	GCCCAAGGTTCCCAATCTGA+AGG	-	chr4.2:24440748-24440767	MS.gene39623:CDS	55.0%
	GGTCATGGATATGGTGGCCA+TGG	-	chr4.2:24441904-24441923	MS.gene39623:CDS	55.0%
	TCTAGCAGGCCTATGCGAGT+AGG	-	chr4.2:24439605-24439624	MS.gene39623:intron	55.0%
!	TGGACACTCCAATGGTGCTG+TGG	-	chr4.2:24440726-24440745	MS.gene39623:CDS	55.0%
!	TGTGCAGGTTGTATCGGCCA+AGG	-	chr4.2:24439178-24439197	MS.gene39623:CDS	55.0%
!!	CTAGCTGTAGTGTTGGCTGG+TGG	-	chr4.2:24440700-24440719	MS.gene39623:CDS	55.0%
!!	GGCGACACTTGCTGTTGATG+AGG	+	chr4.2:24438267-24438286	None:intergenic	55.0%
	AAACCGCCCACTGTGCTGTG+GGG	+	chr4.2:24441064-24441083	None:intergenic	60.0%
	ACATTCAGCGCTGCTGGTGG+TGG	-	chr4.2:24439344-24439363	MS.gene39623:intron	60.0%
	ACCTTGGGCCACAGCACCAT+TGG	+	chr4.2:24440737-24440756	None:intergenic	60.0%
	AGAAACCGCCCACTGTGCTG+TGG	+	chr4.2:24441066-24441085	None:intergenic	60.0%
	AGCTGGCGCCTGAAGAGATC+AGG	-	chr4.2:24438355-24438374	MS.gene39623:intron	60.0%
	CCGACGGGGCATAGTCATCA+TGG	-	chr4.2:24438291-24438310	MS.gene39623:intron	60.0%
	CTTTCTTGGGGTCGCAGTCC+AGG	-	chr4.2:24441390-24441409	MS.gene39623:intron	60.0%
	GAAACCGCCCACTGTGCTGT+GGG	+	chr4.2:24441065-24441084	None:intergenic	60.0%
	GCAGCATCAGCAGAAGCAGC+TGG	-	chr4.2:24438338-24438357	MS.gene39623:intron	60.0%
	GCTACATTCAGCGCTGCTGG+TGG	-	chr4.2:24439341-24439360	MS.gene39623:intron	60.0%
	TGATGACTATGCCCCGTCGG+AGG	+	chr4.2:24438291-24438310	None:intergenic	60.0%
	TGCAACCCCCACAGCACAGT+GGG	-	chr4.2:24441055-24441074	MS.gene39623:intron	60.0%
	TGGGCTACATTCAGCGCTGC+TGG	-	chr4.2:24439338-24439357	MS.gene39623:intron	60.0%
	TTGCAACCCCCACAGCACAG+TGG	-	chr4.2:24441054-24441073	MS.gene39623:intron	60.0%
!!	GCTGTAGTGTTGGCTGGTGG+CGG	-	chr4.2:24440703-24440722	MS.gene39623:CDS	60.0%
!!	TCCAATGGTGCTGTGGCCCA+AGG	-	chr4.2:24440733-24440752	MS.gene39623:CDS	60.0%
	AACCCCCACAGCACAGTGGG+CGG	-	chr4.2:24441058-24441077	MS.gene39623:intron	65.0%
	AACCGCCCACTGTGCTGTGG+GGG	+	chr4.2:24441063-24441082	None:intergenic	65.0%
	GCCCCTTGAACTGCAGCAGC+AGG	+	chr4.2:24441982-24442001	None:intergenic	65.0%
	TGACTATGCCCCGTCGGAGG+CGG	+	chr4.2:24438288-24438307	None:intergenic	65.0%
!	GGTGGCGGTGGACACTCCAA+TGG	-	chr4.2:24440718-24440737	MS.gene39623:CDS	65.0%
!!	GTAGTGTTGGCTGGTGGCGG+TGG	-	chr4.2:24440706-24440725	MS.gene39623:CDS	65.0%
!!	TTCAGCGCTGCTGGTGGTGG+TGG	-	chr4.2:24439347-24439366	MS.gene39623:intron	65.0%
!	AAGTGTCGCCGCCTCCGACG+GGG	-	chr4.2:24438277-24438296	MS.gene39623:intron	70.0%
!	CAAGTGTCGCCGCCTCCGAC+GGG	-	chr4.2:24438276-24438295	MS.gene39623:intron	70.0%
!	GCAAGTGTCGCCGCCTCCGA+CGG	-	chr4.2:24438275-24438294	MS.gene39623:intron	70.0%
!!	CTGCTGGTGGTGGTGGCGAG+AGG	-	chr4.2:24439354-24439373	MS.gene39623:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	24438153	24442008	24438153	ID=MS.gene39623
chr4.2	mRNA	24438153	24442008	24438153	ID=MS.gene39623.t1;Parent=MS.gene39623
chr4.2	exon	24441883	24442008	24441883	ID=MS.gene39623.t1.exon1;Parent=MS.gene39623.t1
chr4.2	CDS	24441883	24442008	24441883	ID=cds.MS.gene39623.t1;Parent=MS.gene39623.t1
chr4.2	exon	24440481	24440976	24440481	ID=MS.gene39623.t1.exon2;Parent=MS.gene39623.t1
chr4.2	CDS	24440481	24440976	24440481	ID=cds.MS.gene39623.t1;Parent=MS.gene39623.t1
chr4.2	exon	24439372	24439457	24439372	ID=MS.gene39623.t1.exon3;Parent=MS.gene39623.t1
chr4.2	CDS	24439372	24439457	24439372	ID=cds.MS.gene39623.t1;Parent=MS.gene39623.t1
chr4.2	exon	24439163	24439293	24439163	ID=MS.gene39623.t1.exon4;Parent=MS.gene39623.t1
chr4.2	CDS	24439163	24439293	24439163	ID=cds.MS.gene39623.t1;Parent=MS.gene39623.t1
chr4.2	exon	24438739	24438835	24438739	ID=MS.gene39623.t1.exon5;Parent=MS.gene39623.t1
chr4.2	CDS	24438739	24438835	24438739	ID=cds.MS.gene39623.t1;Parent=MS.gene39623.t1
chr4.2	exon	24438153	24438284	24438153	ID=MS.gene39623.t1.exon6;Parent=MS.gene39623.t1
chr4.2	CDS	24438153	24438284	24438153	ID=cds.MS.gene39623.t1;Parent=MS.gene39623.t1

Gene Sequence

>MS.gene39623

ATGTCTATGCAGTATCCAGCTACTGCTATGGCTATGATGCAACAGCAGATGATGATGTATCCTCAGCATTATATGCCTTATGTTCATCCTCATCATTATCAGCAGCAGCCACCTCATCAACAGCAAGTGTCGCCGCCTCCGACGGGGCATAGTCATCATGGAGGCCATCAGCAGCATCAATATCAGCAGCATCAGCAGAAGCAGCTGGCGCCTGAAGAGATCAGGACGATCTGGCTTGGTGACCTTCATCATTGGATGGATGAGACTTTTCTTCATAACTGCTTTGCTCATACTGGAGAGGTTTATTTCTATCTCTTAATTGTAATTGAATTTGTTAGATTTGTTGTTTTAATTTCAATATTAATATGCTTCATTTGCTTAATTAATAGCATATCTTGTTAGTTTCTGTTTTTATATAAATGGTCTTGATTTATTGCTGGAAGTTATTAGGGTACAGGCTTCTTTGTTTAATTTGCTGATTTGAATTTTTTTTTTTTTTGATTTGAGATTGATTTAAGGAGCCTTTTGATTTAATTAATCACTGAGGATTTGTTGAACCTTGATTAAATGTTTTAACTTTTAAGCTATGATTTCGAGTTTAATTTAAGTTCATCGATCTTTTTGTGTGTGATTATTGGACTCTTTAATGAATTAGGGTTGTAAATTGACTCTTGTGATTTAAGTTGGTTTCCTTTTTCTATCCTTGGCATTGCCCATATAAGATAGTTATACTTTTGGTACCCTAAGTGGTCCCCTAGAGTTTTGAAGGCCGAAAATGTGACCTTGTTGACCAATGTTTTTAACTAGACTTGCTAGTAGTATAACCTAGATCTCTTAATTGCACTTTGAAAAATGGGGCTAATCAAAATTTGCTTTTTGTCCAATAATGTATTGTAGGATATTCACATGTTAAATATCAATAGCCGACTTTGACGCTTAGACATTGCCGATTATCGCATTTATGACCAAACTTTTTTTTTATTGTCGTCTTCTGATTGGTTTGTTGATGTTTTTTCGTTGGCTTATGTGCAGGTTGTATCGGCCAAGGTCATACGTAATAAGCAAACTGGTCAATCGGAGGGATATGGATTTGTCGAGTTCTACACGCGAGCAATGGCTGAGAAAGTCTTGCAGAACTTCAATGGTACTATGATGCCAAATACCGATCAGGCGTTTCGTCTGAATTGGGCTACATTCAGCGCTGCTGGTGGTGGTGGCGAGAGGCGTTCTTCTGAAGCTTCATCTGATCTCTCTGTATTTGTGGGAGACTTGGCCATAGATGTTACTGATGCTATGCTTCAAGAGACGTTTGCTAGCAAATTTTCATCTATTAAGGGAGCAAAAGTTGTCATTGACTCTAATACTGGTCGTTCAAAAGGCTATGGTTTTGTTAGGTTTGGTGATGAAAGTGAAAGGACAAGAGCAATGACTGAAATGAATGGCGTTTATTGTTCTAGCAGGCCTATGCGAGTAGGTGTTGCAACACCCAAAAAAACTTATGGCAATCCACAACAATATTCTTCGCAAGGTTTGTTATTTAATTATTACCACTTAAATCAGCACCAACCTTTTCTGCTGCAGATACTTCAAATTTTCATTATAACTGAAAGGAGGTCCTAATAATTCAATTCCCTGGTTGGATTGATATTACTATTTTCTTTAATGATTTGTTTGATTTCATTTGTGCATATCTATTTTTATGTTGGTTAAAATTTGAATATAAACATGTATGATGAATAAATCGAAGTGGCCTGTTTTATTTGTAAGTGTGCTTTATGATTTCAGTAATCATACTTGACTTTTCAATACAAGTCTTGGAGCTTGTTGCATCTTAAATATGTTAATTCGTAAATATCATATTTGTTTCTGGCTTTATGCATGAATTTAAACATGTGATAAATAAATTGTGAAGAATAGTTATGCATGAATTCAAACATGGCTTTATGCATGAATATTTGTTTCTGGCTTTACCATAGATGTTTATTAAATATAAACATGTATGTTAATTTGTAAGTTAGCCTGTTTTATTTGTAAGTGCGCTTTAGTATTCATAGTTGACTTTTCAATACAAGTCTCTGAGCTTGTTACTTCTTAAATATGTTAATTCGTATATTAAATCTCATATTTGTTCCTGGCTTTATGCATTAATGGACTTGCGCTTTTTATTTTTGACAATTGCTTATTGCAGATTTTTCTATGCTTTTGCACCACTTTGTTATATTTCCTTGCACCACTTGAATCTATTCCCTTGCCTATCTCATGATGTATACTGTTTGATGTCTAAACGACAAGTTTGTATTTTTCAACCTCAATCTATTTATTGAATGTTAGTGATGTATGTTTATAGATTTTTTTTTTTTTTTTTTTGTAATTTAGAATCTTGAATGCATAACCAGGCAGAAAAATTAATTTTTATGGCATATATATTGCAAAGCTTTCTTGTTTATGTTTATGTTTATAACACGAGAGAGTTATCACTGGAATGCAGTAATATCACGTATCATGCTTCAGAATTTTAAATCACTGACTTTTTTTTTCTTTCTTAAACTAGCTGTAGTGTTGGCTGGTGGCGGTGGACACTCCAATGGTGCTGTGGCCCAAGGTTCCCAATCTGAAGGGGATTCTAACAACACAACTGTGAGTCTGCTTTGGTAGCTTTTTCTATATCTTTTAATCAACTTCTTTTGATATCTCAGTAACGGATATCTGTTGCAGATATTTGTTGGAGGACTTGACTCTGACATTAGTGACGAGGATCTCAGACAACCATTTTTGCAATTTGGTGATGTAATCTCTGTGAAAATCCCAGTCGGTAAAGGATGTGGTTTTGTTCAACTTGCTGACAGGTACACTTGTGGTATCCCTTAGCATAGATATAGATCGTAACTTGCTTGCAAGTCATTGCAACCCCCACAGCACAGTGGGCGGTTTCTTGCGAAATGAACAGTGGCATAAGTATTCCTCAAAGGGATAGGGAATCCTTGATTATGCCAACTCTTCATCCTGTGGAATCATGTAAGGATGAGGATATGATAATAAAGAAAGTTGATGTGAACTACTGTATAAGATGCTATGATTCTGATTGCAATTGTAACTTCCAATATGTATCGTCTTATTTTTGACTGGGTGGATTAGCTATGTTTTAATAATGCCTTCTGCTCTTTATGTTACAGAAAGAATGCTGAGGAAGCAATTCAGGGATTGAATGGAACAGTGATTGGAAAGCAGACAGTGCGTCTTTCTTGGGGTCGCAGTCCAGGAAATAAGCATGTGAGTTTATTATTCTGCTCTGAATTCAATTTGTTGTTATATTTTCACTTTGGCCATCTAATGGGAAAATTACGAGTCTCGTTCTCTCTGTAATCAGGTCCTGTTCTAAGTTTGTGTACTAAATCTGTGAAACTAATTGTTTTTAGTAGTGTAAGCAATACATGCATCAGTGTACTAAATGTGTTGTATATTTTCTATTATGAGCTGCATCTTCTACTTACAAACCAAATTATTTTATAAAATTTCCGCATTCATATACCTTCAGCATGTAACTAGTTGCTACTAAGAGTTTTCAATTAGCATATACATACACTTTTTAATTTCTTTTCACCTTAGATTTTGATTATGAAGTCCCTAAAATGAATTCTCACTTTTAAGTAAAGCAGAAACCAATCAAGTAATCTTATATCATCATTTAAATCCATCTCTAATTTAATTCTTTGTGATGTCGCAGTGGAGGAATGACTCTAATGGTTATGGAGGTCATGGATATGGTGGCCATGGATATGGAAGTAATGGATATGCTGCTAGACAAAATCAGGATATAGCTATGCAACCTGCTGCTGCAGTTCAAGGGGCTTCCTAA

Protein sequence

>MS.gene39623.t1

MSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQQQPPHQQQVVSAKVIRNKQTGQSEGYGFVEFYTRAMAEKVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEASSDLSVFVGDLAIDVTDAMLQETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVATPKKTYGNPQQYSSQAVVLAGGGGHSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKHWRNDSNGYGGHGYGGHGYGSNGYAARQNQDIAMQPAAAVQGAS