Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65276.t1 | XP_013456037.1 | 89.8 | 620 | 63 | 0 | 1 | 620 | 1 | 620 | 4.00E-237 | 830.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65276.t1 | Q9ZQC5 | 34.7 | 513 | 264 | 9 | 131 | 620 | 119 | 583 | 1.3e-50 | 202.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65276.t1 | A0A072ULW0 | 89.8 | 620 | 63 | 0 | 1 | 620 | 1 | 620 | 2.9e-237 | 830.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene65276 | 0.850527 | 1.60E-60 | -1.69E-46 |
| MS.gene049221 | MS.gene65276 | 0.818547 | 1.85E-52 | -1.69E-46 |
| MS.gene049328 | MS.gene65276 | 0.81206 | 5.13E-51 | -1.69E-46 |
| MS.gene049341 | MS.gene65276 | 0.819583 | 1.08E-52 | -1.69E-46 |
| MS.gene049418 | MS.gene65276 | 0.819607 | 1.06E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene65276 | 0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene049695 | MS.gene65276 | 0.81021 | 1.29E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene65276 | 0.833414 | 5.41E-56 | -1.69E-46 |
| MS.gene049979 | MS.gene65276 | 0.828729 | 7.65E-55 | -1.69E-46 |
| MS.gene050020 | MS.gene65276 | 0.846732 | 1.81E-59 | -1.69E-46 |
| MS.gene050194 | MS.gene65276 | 0.822443 | 2.36E-53 | -1.69E-46 |
| MS.gene05045 | MS.gene65276 | 0.803955 | 2.72E-49 | -1.69E-46 |
| MS.gene050586 | MS.gene65276 | 0.826241 | 3.02E-54 | -1.69E-46 |
| MS.gene050630 | MS.gene65276 | 0.806563 | 7.74E-50 | -1.69E-46 |
| MS.gene050778 | MS.gene65276 | 0.802458 | 5.56E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene65276 | 0.841691 | 4.08E-58 | -1.69E-46 |
| MS.gene050808 | MS.gene65276 | 0.814172 | 1.76E-51 | -1.69E-46 |
| MS.gene050901 | MS.gene65276 | 0.816677 | 4.89E-52 | -1.69E-46 |
| MS.gene050959 | MS.gene65276 | 0.804507 | 2.09E-49 | -1.69E-46 |
| MS.gene051021 | MS.gene65276 | 0.821949 | 3.08E-53 | -1.69E-46 |
| MS.gene051388 | MS.gene65276 | 0.814206 | 1.73E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene65276 | 0.867995 | 9.07E-66 | -1.69E-46 |
| MS.gene051719 | MS.gene65276 | 0.874698 | 5.51E-68 | -1.69E-46 |
| MS.gene051720 | MS.gene65276 | 0.875524 | 2.88E-68 | -1.69E-46 |
| MS.gene051744 | MS.gene65276 | 0.822975 | 1.78E-53 | -1.69E-46 |
| MS.gene052020 | MS.gene65276 | 0.828557 | 8.42E-55 | -1.69E-46 |
| MS.gene052133 | MS.gene65276 | 0.849954 | 2.32E-60 | -1.69E-46 |
| MS.gene052323 | MS.gene65276 | 0.802239 | 6.16E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene65276 | 0.812528 | 4.05E-51 | -1.69E-46 |
| MS.gene052611 | MS.gene65276 | 0.818117 | 2.32E-52 | -1.69E-46 |
| MS.gene052612 | MS.gene65276 | 0.810178 | 1.31E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene65276 | 0.864754 | 9.69E-65 | -1.69E-46 |
| MS.gene052731 | MS.gene65276 | 0.826607 | 2.47E-54 | -1.69E-46 |
| MS.gene052732 | MS.gene65276 | 0.888656 | 4.87E-73 | -1.69E-46 |
| MS.gene052879 | MS.gene65276 | 0.800399 | 1.47E-48 | -1.69E-46 |
| MS.gene053144 | MS.gene65276 | 0.893339 | 6.89E-75 | -1.69E-46 |
| MS.gene053174 | MS.gene65276 | 0.866721 | 2.32E-65 | -1.69E-46 |
| MS.gene053226 | MS.gene65276 | 0.820768 | 5.76E-53 | -1.69E-46 |
| MS.gene053581 | MS.gene65276 | 0.855024 | 8.33E-62 | -1.69E-46 |
| MS.gene053599 | MS.gene65276 | 0.818985 | 1.47E-52 | -1.69E-46 |
| MS.gene054550 | MS.gene65276 | 0.876238 | 1.64E-68 | -1.69E-46 |
| MS.gene054584 | MS.gene65276 | 0.895095 | 1.33E-75 | -1.69E-46 |
| MS.gene055465 | MS.gene65276 | 0.857727 | 1.34E-62 | -1.69E-46 |
| MS.gene055466 | MS.gene65276 | 0.85498 | 8.57E-62 | -1.69E-46 |
| MS.gene055468 | MS.gene65276 | 0.848951 | 4.42E-60 | -1.69E-46 |
| MS.gene055469 | MS.gene65276 | 0.812238 | 4.69E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene65276 | 0.836651 | 8.26E-57 | -1.69E-46 |
| MS.gene055537 | MS.gene65276 | 0.84414 | 9.09E-59 | -1.69E-46 |
| MS.gene055580 | MS.gene65276 | -0.853313 | 2.60E-61 | -1.69E-46 |
| MS.gene055890 | MS.gene65276 | 0.860064 | 2.68E-63 | -1.69E-46 |
| MS.gene055891 | MS.gene65276 | 0.848306 | 6.67E-60 | -1.69E-46 |
| MS.gene056043 | MS.gene65276 | -0.83134 | 1.76E-55 | -1.69E-46 |
| MS.gene056228 | MS.gene65276 | 0.816365 | 5.74E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene65276 | 0.811391 | 7.17E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene65276 | 0.807276 | 5.47E-50 | -1.69E-46 |
| MS.gene056368 | MS.gene65276 | 0.803789 | 2.95E-49 | -1.69E-46 |
| MS.gene056396 | MS.gene65276 | 0.810011 | 1.43E-50 | -1.69E-46 |
| MS.gene056542 | MS.gene65276 | 0.801638 | 8.19E-49 | -1.69E-46 |
| MS.gene056543 | MS.gene65276 | 0.803196 | 3.91E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene65276 | 0.838697 | 2.47E-57 | -1.69E-46 |
| MS.gene056584 | MS.gene65276 | 0.814979 | 1.17E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene65276 | 0.801161 | 1.03E-48 | -1.69E-46 |
| MS.gene057446 | MS.gene65276 | 0.807957 | 3.92E-50 | -1.69E-46 |
| MS.gene058087 | MS.gene65276 | 0.802939 | 4.42E-49 | -1.69E-46 |
| MS.gene058945 | MS.gene65276 | 0.820948 | 5.24E-53 | -1.69E-46 |
| MS.gene059015 | MS.gene65276 | 0.810792 | 9.66E-51 | -1.69E-46 |
| MS.gene059154 | MS.gene65276 | 0.849057 | 4.13E-60 | -1.69E-46 |
| MS.gene059297 | MS.gene65276 | 0.825161 | 5.45E-54 | -1.69E-46 |
| MS.gene059937 | MS.gene65276 | 0.866099 | 3.65E-65 | -1.69E-46 |
| MS.gene060194 | MS.gene65276 | 0.834052 | 3.75E-56 | -1.69E-46 |
| MS.gene060519 | MS.gene65276 | 0.844222 | 8.64E-59 | -1.69E-46 |
| MS.gene060587 | MS.gene65276 | 0.856726 | 2.65E-62 | -1.69E-46 |
| MS.gene060603 | MS.gene65276 | 0.809776 | 1.60E-50 | -1.69E-46 |
| MS.gene060884 | MS.gene65276 | 0.850699 | 1.43E-60 | -1.69E-46 |
| MS.gene060886 | MS.gene65276 | 0.847064 | 1.46E-59 | -1.69E-46 |
| MS.gene061176 | MS.gene65276 | 0.821947 | 3.08E-53 | -1.69E-46 |
| MS.gene061177 | MS.gene65276 | 0.820112 | 8.15E-53 | -1.69E-46 |
| MS.gene061178 | MS.gene65276 | 0.821468 | 3.97E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65276 | MS.gene017922 | PPI |
| MS.gene65276 | MS.gene05873 | PPI |
| MS.gene40254 | MS.gene65276 | PPI |
| MS.gene024179 | MS.gene65276 | PPI |
| MS.gene72021 | MS.gene65276 | PPI |
| MS.gene65276 | MS.gene04811 | PPI |
| MS.gene65276 | MS.gene015800 | PPI |
| MS.gene65276 | MS.gene016702 | PPI |
| MS.gene072335 | MS.gene65276 | PPI |
| MS.gene73762 | MS.gene65276 | PPI |
| MS.gene65276 | MS.gene019335 | PPI |
| MS.gene65276 | MS.gene014143 | PPI |
| MS.gene014608 | MS.gene65276 | PPI |
| MS.gene23577 | MS.gene65276 | PPI |
| MS.gene40704 | MS.gene65276 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65276.t1 | MTR_4g461060 | 96.774 | 620 | 20 | 0 | 1 | 620 | 1 | 620 | 0.0 | 1201 |
| MS.gene65276.t1 | MTR_4g461060 | 96.748 | 615 | 20 | 0 | 6 | 620 | 3 | 617 | 0.0 | 1187 |
| MS.gene65276.t1 | MTR_7g100730 | 45.208 | 626 | 315 | 7 | 1 | 617 | 1 | 607 | 1.79e-141 | 424 |
| MS.gene65276.t1 | MTR_1g066850 | 44.216 | 631 | 290 | 10 | 1 | 617 | 1 | 583 | 9.40e-129 | 391 |
| MS.gene65276.t1 | MTR_2g093260 | 52.796 | 447 | 158 | 9 | 188 | 620 | 78 | 485 | 5.17e-119 | 362 |
| MS.gene65276.t1 | MTR_7g061150 | 46.277 | 376 | 178 | 5 | 248 | 617 | 3 | 360 | 2.25e-79 | 256 |
| MS.gene65276.t1 | MTR_2g093250 | 55.814 | 129 | 53 | 1 | 306 | 434 | 93 | 217 | 5.71e-32 | 124 |
| MS.gene65276.t1 | MTR_2g093240 | 46.296 | 108 | 29 | 2 | 513 | 620 | 3 | 81 | 4.80e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65276.t1 | AT5G60210 | 44.712 | 624 | 281 | 13 | 1 | 620 | 1 | 564 | 3.53e-145 | 432 |
| MS.gene65276.t1 | AT5G60210 | 44.712 | 624 | 281 | 13 | 1 | 620 | 1 | 564 | 3.53e-145 | 432 |
| MS.gene65276.t1 | AT5G60210 | 44.712 | 624 | 281 | 13 | 1 | 620 | 1 | 564 | 3.53e-145 | 432 |
| MS.gene65276.t1 | AT5G60210 | 44.712 | 624 | 281 | 13 | 1 | 620 | 1 | 564 | 3.53e-145 | 432 |
| MS.gene65276.t1 | AT5G60210 | 44.588 | 619 | 279 | 13 | 6 | 620 | 30 | 588 | 4.24e-142 | 426 |
| MS.gene65276.t1 | AT5G60210 | 44.588 | 619 | 279 | 13 | 6 | 620 | 30 | 588 | 4.24e-142 | 426 |
| MS.gene65276.t1 | AT2G37080 | 40.769 | 650 | 286 | 13 | 1 | 620 | 1 | 581 | 9.09e-121 | 370 |
| MS.gene65276.t1 | AT2G37080 | 40.644 | 652 | 286 | 14 | 1 | 620 | 1 | 583 | 7.75e-119 | 365 |
| MS.gene65276.t1 | AT2G37080 | 40.644 | 652 | 286 | 14 | 1 | 620 | 1 | 583 | 7.75e-119 | 365 |
| MS.gene65276.t1 | AT3G53350 | 40.838 | 191 | 88 | 4 | 1 | 187 | 1 | 170 | 4.78e-30 | 122 |
| MS.gene65276.t1 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 176 | 394 | 1.81e-23 | 103 |
| MS.gene65276.t1 | AT3G53350 | 40.838 | 191 | 88 | 4 | 1 | 187 | 1 | 170 | 4.78e-30 | 122 |
| MS.gene65276.t1 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 176 | 394 | 1.81e-23 | 103 |
| MS.gene65276.t1 | AT3G53350 | 40.415 | 193 | 88 | 5 | 1 | 187 | 1 | 172 | 3.10e-28 | 117 |
| MS.gene65276.t1 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 178 | 396 | 2.23e-23 | 103 |
| MS.gene65276.t1 | AT3G53350 | 40.415 | 193 | 88 | 5 | 1 | 187 | 1 | 172 | 3.10e-28 | 117 |
| MS.gene65276.t1 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 178 | 396 | 2.23e-23 | 103 |
| MS.gene65276.t1 | AT3G53350 | 40.415 | 193 | 88 | 5 | 1 | 187 | 1 | 172 | 3.10e-28 | 117 |
| MS.gene65276.t1 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 178 | 396 | 2.23e-23 | 103 |
| MS.gene65276.t1 | AT3G53350 | 41.081 | 185 | 84 | 4 | 7 | 187 | 18 | 181 | 2.98e-26 | 112 |
| MS.gene65276.t1 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 187 | 405 | 5.80e-23 | 102 |
| MS.gene65276.t1 | AT3G53350 | 39.572 | 187 | 86 | 5 | 7 | 187 | 18 | 183 | 1.30e-24 | 107 |
| MS.gene65276.t1 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 189 | 407 | 4.54e-23 | 102 |
| MS.gene65276.t1 | AT3G53350 | 39.572 | 187 | 86 | 5 | 7 | 187 | 18 | 183 | 1.30e-24 | 107 |
| MS.gene65276.t1 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 189 | 407 | 4.54e-23 | 102 |
| MS.gene65276.t1 | AT3G53350 | 36.199 | 221 | 86 | 5 | 1 | 187 | 1 | 200 | 2.29e-24 | 106 |
| MS.gene65276.t1 | AT3G53350 | 30.725 | 345 | 112 | 11 | 277 | 620 | 206 | 424 | 5.34e-23 | 102 |
| MS.gene65276.t1 | AT1G78430 | 37.640 | 178 | 99 | 5 | 444 | 617 | 151 | 320 | 8.52e-19 | 88.2 |
| MS.gene65276.t1 | AT1G17140 | 34.254 | 181 | 98 | 4 | 449 | 617 | 169 | 340 | 3.67e-14 | 74.7 |
| MS.gene65276.t1 | AT1G17140 | 34.254 | 181 | 98 | 4 | 449 | 617 | 169 | 340 | 3.67e-14 | 74.7 |
Find 98 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATTTGTGCCTGAGTTTC+AGG | 0.158972 | 4.3:+41412736 | None:intergenic |
| TACCTCAGGAACTGGGCTTC+TGG | 0.169803 | 4.3:+41413688 | None:intergenic |
| AAAGAACCGTCGAGATTCTA+AGG | 0.289339 | 4.3:-41412678 | MS.gene65276:CDS |
| GAGCAACTCTTAGCCCTATC+TGG | 0.293900 | 4.3:-41413099 | MS.gene65276:CDS |
| TCAACATCTTCAGCATAATT+AGG | 0.312004 | 4.3:+41411674 | None:intergenic |
| ACCTCAGGAACTGGGCTTCT+GGG | 0.316608 | 4.3:+41413689 | None:intergenic |
| TACTGAGAGATCTGTGTCTT+TGG | 0.319421 | 4.3:-41411723 | MS.gene65276:CDS |
| TCTTAGTTCGCTTTCCATTT+CGG | 0.319511 | 4.3:+41411829 | None:intergenic |
| TAGGGCTAAGAGTTGCTCTT+TGG | 0.329098 | 4.3:+41413104 | None:intergenic |
| TGCTTTGTCTTCTGCATTGA+AGG | 0.331152 | 4.3:-41412926 | MS.gene65276:CDS |
| ATAATTAGGTGAATACTTAT+AGG | 0.350218 | 4.3:+41411688 | None:intergenic |
| CGGTCACCCTCGCCACTTTA+CGG | 0.350515 | 4.3:+41411882 | None:intergenic |
| TGACTTGCGATCAGCGAGTT+TGG | 0.351529 | 4.3:+41413712 | None:intergenic |
| GGTAACATGCTGAAGAAGTT+TGG | 0.353831 | 4.3:-41411626 | MS.gene65276:CDS |
| GCACGCGGAGAAACTTTCTT+AGG | 0.360740 | 4.3:+41413827 | None:intergenic |
| ATCTCTTCTTCAATATGATT+AGG | 0.361618 | 4.3:+41412451 | None:intergenic |
| CCCGAGCAAAATATCTGAAT+TGG | 0.366490 | 4.3:-41413229 | MS.gene65276:CDS |
| CAGCAATGCGTACGAGTTGA+TGG | 0.372307 | 4.3:-41412332 | MS.gene65276:CDS |
| TGAAGAAGTTTGGAGTCTTA+TGG | 0.383316 | 4.3:-41411616 | MS.gene65276:CDS |
| GTTCTTTGCTATTCTTGAGT+TGG | 0.389004 | 4.3:+41412758 | None:intergenic |
| CAACTCCATTGCTTTGGAGT+TGG | 0.399162 | 4.3:-41412626 | MS.gene65276:CDS |
| AAACTTGTTACCTCAGGAAC+TGG | 0.401038 | 4.3:+41413680 | None:intergenic |
| GGCAGCTGCTGCTATGATTT+CGG | 0.401359 | 4.3:-41411765 | MS.gene65276:CDS |
| TCAAAAGGAACTCAAAAGAT+TGG | 0.417608 | 4.3:-41412116 | MS.gene65276:CDS |
| TGGCTGCAACTCCATTGCTT+TGG | 0.418359 | 4.3:-41412632 | MS.gene65276:CDS |
| CGCGAGGCGGTTACGAAACT+CGG | 0.423677 | 4.3:-41411935 | MS.gene65276:CDS |
| GCTGAAAGCACAACTTGAAT+TGG | 0.425528 | 4.3:-41412893 | MS.gene65276:CDS |
| AACTGATATTGAAGAGTTGA+AGG | 0.430741 | 4.3:-41412245 | MS.gene65276:CDS |
| TGTTCTTTGAAGTCTGAGAT+TGG | 0.431751 | 4.3:-41412427 | MS.gene65276:CDS |
| TATCTAGAGCTATGTGCTAC+TGG | 0.432289 | 4.3:-41413051 | MS.gene65276:CDS |
| AGAGTTGAAGGCTAATCTAA+TGG | 0.435601 | 4.3:-41412233 | MS.gene65276:CDS |
| CTTCAGCATCTCGTTCTCTT+CGG | 0.435786 | 4.3:+41412030 | None:intergenic |
| CCTCCAACTCACATTGTCTC+TGG | 0.446526 | 4.3:+41412287 | None:intergenic |
| AAATGAACATGGACTTCAAA+AGG | 0.449057 | 4.3:-41412131 | MS.gene65276:CDS |
| GCAAGCTCAGCAAGACTTCG+AGG | 0.450128 | 4.3:-41413130 | MS.gene65276:CDS |
| GTTGATGGAGCAGATAAAAT+CGG | 0.470705 | 4.3:-41412317 | MS.gene65276:CDS |
| GAGCAGATAAAATCGGAATC+AGG | 0.477930 | 4.3:-41412310 | MS.gene65276:CDS |
| AACCGAGTTGCAAGGTATCA+TGG | 0.481196 | 4.3:-41412203 | MS.gene65276:CDS |
| AAGCGAACTAAGAAGGCTTA+AGG | 0.481520 | 4.3:-41411819 | MS.gene65276:CDS |
| TCAAACTCAACAAGCTGAAT+CGG | 0.486664 | 4.3:-41412851 | MS.gene65276:CDS |
| CAGAAGTGGTTCTTCTGAAG+TGG | 0.492122 | 4.3:-41413852 | MS.gene65276:CDS |
| ACAAGTGGCAAGCTCCGAAA+TGG | 0.492854 | 4.3:-41411843 | MS.gene65276:CDS |
| GTCAACTGAGAGATGCTGTT+GGG | 0.495983 | 4.3:+41412954 | None:intergenic |
| GAAAATCAACAAGAGTTGCT+TGG | 0.499437 | 4.3:-41412005 | MS.gene65276:CDS |
| CCAGAGACAATGTGAGTTGG+AGG | 0.499761 | 4.3:-41412287 | MS.gene65276:CDS |
| TCACTCTGTTCAAAATCTTG+TGG | 0.500181 | 4.3:-41412524 | MS.gene65276:CDS |
| TGATTTCGGCAGGGAACAAT+GGG | 0.505513 | 4.3:-41411751 | MS.gene65276:CDS |
| TGAAATATTGAGAAATAGAG+AGG | 0.505982 | 4.3:-41412476 | MS.gene65276:CDS |
| ACTTCAAGATGATTTGAAGA+AGG | 0.507940 | 4.3:-41413190 | MS.gene65276:CDS |
| TGAATTGAAAGCTGATATGA+TGG | 0.510421 | 4.3:-41412080 | MS.gene65276:CDS |
| GCTGCTGCTATGATTTCGGC+AGG | 0.511645 | 4.3:-41411761 | MS.gene65276:CDS |
| ATGATTTCGGCAGGGAACAA+TGG | 0.513538 | 4.3:-41411752 | MS.gene65276:CDS |
| TAGCAAAGAACCTGAAACTC+AGG | 0.524331 | 4.3:-41412746 | MS.gene65276:CDS |
| CTTTGAAGTCTGAGATTGGA+CGG | 0.524621 | 4.3:-41412423 | MS.gene65276:CDS |
| GACGTTGCGAGAGACGTAGA+TGG | 0.528471 | 4.3:-41412652 | MS.gene65276:CDS |
| ACGTGATAGCGCATGGAAGT+CGG | 0.536408 | 4.3:-41412989 | MS.gene65276:CDS |
| AAATGGAAAGCGAACTAAGA+AGG | 0.538764 | 4.3:-41411826 | MS.gene65276:CDS |
| TTCCATGATACCTTGCAACT+CGG | 0.542413 | 4.3:+41412201 | None:intergenic |
| AGACAGAAGCAACCGTAAAG+TGG | 0.543135 | 4.3:-41411894 | MS.gene65276:CDS |
| ATCAGAATCACTTTCTCAGA+TGG | 0.543609 | 4.3:-41412794 | MS.gene65276:CDS |
| GCAGTTAGAAGCAGCACAAG+TGG | 0.544851 | 4.3:-41411858 | MS.gene65276:CDS |
| TTGTGCTGCTTCTAACTGCT+CGG | 0.545994 | 4.3:+41411862 | None:intergenic |
| TTGTTCTTGATATTTAGTCT+CGG | 0.554617 | 4.3:+41412378 | None:intergenic |
| AACTTGTTACCTCAGGAACT+GGG | 0.572563 | 4.3:+41413681 | None:intergenic |
| AGATGATTTGAAGAAGGTGA+AGG | 0.573247 | 4.3:-41413184 | MS.gene65276:CDS |
| AGGCCAGAGACAATGTGAGT+TGG | 0.574082 | 4.3:-41412290 | MS.gene65276:CDS |
| AGTTGGAACATTCTAGAGCA+AGG | 0.576110 | 4.3:-41412609 | MS.gene65276:CDS |
| CAGAAGAACGTGATAGCGCA+TGG | 0.577018 | 4.3:-41412996 | MS.gene65276:CDS |
| ATGATTCAGACAAAATAAGC+TGG | 0.579255 | 4.3:+41413160 | None:intergenic |
| TCAAACTAGTAAAATATCAA+AGG | 0.580215 | 4.3:-41413744 | MS.gene65276:CDS |
| TACGAAACTCGGGATTGTGA+TGG | 0.584576 | 4.3:-41411924 | MS.gene65276:CDS |
| GAAACTCGGGATTGTGATGG+AGG | 0.585195 | 4.3:-41411921 | MS.gene65276:CDS |
| ATGTTCCAACTCCAAAGCAA+TGG | 0.588382 | 4.3:+41412621 | None:intergenic |
| TTAAGGTACAGTCTGATCAA+TGG | 0.588594 | 4.3:-41411802 | MS.gene65276:CDS |
| AGCCGAGGCTGCAAAACGCG+AGG | 0.589775 | 4.3:-41411951 | MS.gene65276:CDS |
| CTTGAATTGGTAGCTACTTG+TGG | 0.590895 | 4.3:-41412880 | MS.gene65276:CDS |
| CGAAGAAGAAGATACAGAGT+CGG | 0.594385 | 4.3:+41413769 | None:intergenic |
| GGATGACAGTAAAGTGAGAG+AGG | 0.601699 | 4.3:-41411984 | MS.gene65276:CDS |
| GAGTAGTCGTAGTTCTCAGT+TGG | 0.604285 | 4.3:+41413798 | None:intergenic |
| GGATGATTGTAAATTCGAGA+AGG | 0.605294 | 4.3:-41412503 | MS.gene65276:CDS |
| GTTGGAACATTCTAGAGCAA+GGG | 0.613738 | 4.3:-41412608 | MS.gene65276:CDS |
| ACCCAGAAGCCCAGTTCCTG+AGG | 0.615333 | 4.3:-41413690 | MS.gene65276:intron |
| ATGTCATCACAAAATGAACA+TGG | 0.616779 | 4.3:-41412142 | MS.gene65276:CDS |
| CTCAGTTGGCGTACAGCACG+CGG | 0.616898 | 4.3:+41413812 | None:intergenic |
| GACAAGGAAACCGAGTTGCA+AGG | 0.617966 | 4.3:-41412211 | MS.gene65276:CDS |
| CGAGGCTGCAAAACGCGAGG+CGG | 0.620966 | 4.3:-41411948 | MS.gene65276:CDS |
| AAGCAACCGTAAAGTGGCGA+GGG | 0.625212 | 4.3:-41411888 | MS.gene65276:CDS |
| ACAGTCTGATCAATGGAGGA+AGG | 0.630704 | 4.3:-41411795 | MS.gene65276:CDS |
| GCGAGGCGGTTACGAAACTC+GGG | 0.631591 | 4.3:-41411934 | MS.gene65276:CDS |
| AGTCAACTGAGAGATGCTGT+TGG | 0.631624 | 4.3:+41412953 | None:intergenic |
| TCAATGGAGGAAGGCTGCAG+AGG | 0.637395 | 4.3:-41411786 | MS.gene65276:CDS |
| GAAGCAACCGTAAAGTGGCG+AGG | 0.639605 | 4.3:-41411889 | MS.gene65276:CDS |
| GAAGGCTAATCTAATGGACA+AGG | 0.644778 | 4.3:-41412227 | MS.gene65276:CDS |
| AGGTACAGTCTGATCAATGG+AGG | 0.656687 | 4.3:-41411799 | MS.gene65276:CDS |
| GTCATCCCTTAGAATCTCGA+CGG | 0.658533 | 4.3:+41412672 | None:intergenic |
| CTGCTGCTATGATTTCGGCA+GGG | 0.663851 | 4.3:-41411760 | MS.gene65276:CDS |
| AGAGGAAATAGAGAAAGCCG+AGG | 0.674506 | 4.3:-41411966 | MS.gene65276:CDS |
| AAGAACCGTCGAGATTCTAA+GGG | 0.684529 | 4.3:-41412677 | MS.gene65276:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATCTTTAATTATAGAAA+TGG | + | chr4.3:41412630-41412649 | None:intergenic | 10.0% |
| !! | AATACAAAAAAGTTATAATG+TGG | + | chr4.3:41412127-41412146 | None:intergenic | 15.0% |
| !! | TACAAAAACAACATTTATAT+AGG | + | chr4.3:41411662-41411681 | None:intergenic | 15.0% |
| !!! | CTAGTACTTTTTTTTTTTAT+TGG | - | chr4.3:41412097-41412116 | MS.gene65276:CDS | 15.0% |
| !! | AAAATCTTCTCAACTAAAAA+AGG | + | chr4.3:41412919-41412938 | None:intergenic | 20.0% |
| !! | ATAATTAGGTGAATACTTAT+AGG | + | chr4.3:41414517-41414536 | None:intergenic | 20.0% |
| !! | ATTGTTTAATAATGACAACA+AGG | - | chr4.3:41412242-41412261 | MS.gene65276:CDS | 20.0% |
| !! | TACAAAATCTATGTTGTAAA+TGG | + | chr4.3:41412302-41412321 | None:intergenic | 20.0% |
| !! | TCAAACTAGTAAAATATCAA+AGG | - | chr4.3:41412458-41412477 | MS.gene65276:CDS | 20.0% |
| !!! | ATTCTGATAAGTTTTGATTT+AGG | + | chr4.3:41413396-41413415 | None:intergenic | 20.0% |
| !!! | CATTGTGATAAAATGAATTT+TGG | + | chr4.3:41411822-41411841 | None:intergenic | 20.0% |
| !!! | TTTTATTGAAATTTCAGAAG+TGG | - | chr4.3:41412336-41412355 | MS.gene65276:CDS | 20.0% |
| ! | ATCTAACATTTACAACAGAA+TGG | - | chr4.3:41412156-41412175 | MS.gene65276:CDS | 25.0% |
| ! | ATCTCTTCTTCAATATGATT+AGG | + | chr4.3:41413754-41413773 | None:intergenic | 25.0% |
| ! | ATTCTGTTGTAAATGTTAGA+TGG | + | chr4.3:41412157-41412176 | None:intergenic | 25.0% |
| ! | CCAAACAAAGTCTATATTTA+AGG | + | chr4.3:41412575-41412594 | None:intergenic | 25.0% |
| ! | CCTTAAATATAGACTTTGTT+TGG | - | chr4.3:41412572-41412591 | MS.gene65276:CDS | 25.0% |
| ! | TATAATTGATGTTGCATTAG+AGG | - | chr4.3:41412945-41412964 | MS.gene65276:CDS | 25.0% |
| ! | TGAAATATTGAGAAATAGAG+AGG | - | chr4.3:41413726-41413745 | MS.gene65276:CDS | 25.0% |
| ! | TTGTTCTTGATATTTAGTCT+CGG | + | chr4.3:41413827-41413846 | None:intergenic | 25.0% |
| !! | TCATTATTGTGTTTCCTTTT+TGG | - | chr4.3:41411967-41411986 | MS.gene65276:CDS | 25.0% |
| !! | TGTCATTGATTAGTTCTTTA+TGG | + | chr4.3:41411854-41411873 | None:intergenic | 25.0% |
| !! | TGTTGACTGAATAAAACAAA+AGG | + | chr4.3:41412069-41412088 | None:intergenic | 25.0% |
| !!! | ATTAAGTTGATTATCCAAAC+TGG | - | chr4.3:41412825-41412844 | MS.gene65276:CDS | 25.0% |
| !!! | TTAAGTTGATTATCCAAACT+GGG | - | chr4.3:41412826-41412845 | MS.gene65276:CDS | 25.0% |
| !!! | TTCAAGATTACCTTGTTTTT+GGG | + | chr4.3:41411609-41411628 | None:intergenic | 25.0% |
| !!! | TTTCAAGATTACCTTGTTTT+TGG | + | chr4.3:41411610-41411629 | None:intergenic | 25.0% |
| AAATGAACATGGACTTCAAA+AGG | - | chr4.3:41414071-41414090 | MS.gene65276:intron | 30.0% | |
| AACTGATATTGAAGAGTTGA+AGG | - | chr4.3:41413957-41413976 | MS.gene65276:intron | 30.0% | |
| AAGTCTATATTTAAGGACAG+AGG | + | chr4.3:41412568-41412587 | None:intergenic | 30.0% | |
| ACTTCAAGATGATTTGAAGA+AGG | - | chr4.3:41413012-41413031 | MS.gene65276:CDS | 30.0% | |
| AGTTACCATTTATGTGTGAA+AGG | - | chr4.3:41412207-41412226 | MS.gene65276:CDS | 30.0% | |
| ATGATTCAGACAAAATAAGC+TGG | + | chr4.3:41413045-41413064 | None:intergenic | 30.0% | |
| ATGTCATCACAAAATGAACA+TGG | - | chr4.3:41414060-41414079 | MS.gene65276:intron | 30.0% | |
| ATTTAGGCAAGGTGATAAAA+GGG | + | chr4.3:41411927-41411946 | None:intergenic | 30.0% | |
| CAAAAGGTTCCTTAAAAAAG+AGG | + | chr4.3:41412053-41412072 | None:intergenic | 30.0% | |
| GATTTCCAGAGAAAGAAAAA+TGG | - | chr4.3:41414555-41414574 | MS.gene65276:intron | 30.0% | |
| GGTATCTACATTTAATTGAG+AGG | - | chr4.3:41411739-41411758 | MS.gene65276:CDS | 30.0% | |
| TCAAAAGGAACTCAAAAGAT+TGG | - | chr4.3:41414086-41414105 | MS.gene65276:intron | 30.0% | |
| TCAACATCTTCAGCATAATT+AGG | + | chr4.3:41414531-41414550 | None:intergenic | 30.0% | |
| TGAATTGAAAGCTGATATGA+TGG | - | chr4.3:41414122-41414141 | MS.gene65276:intron | 30.0% | |
| TGAGACATGATTATGCATTT+AGG | + | chr4.3:41411943-41411962 | None:intergenic | 30.0% | |
| ! | CAGAGGTAGTATTTTATTAC+TGG | + | chr4.3:41412551-41412570 | None:intergenic | 30.0% |
| ! | CATTTTATCACAATGCATCA+AGG | - | chr4.3:41411827-41411846 | MS.gene65276:CDS | 30.0% |
| ! | TCCAATTCAGATATTTTGCT+CGG | + | chr4.3:41412977-41412996 | None:intergenic | 30.0% |
| !! | ACAACAAGGTATAAGTTGAT+TGG | - | chr4.3:41412256-41412275 | MS.gene65276:CDS | 30.0% |
| !! | TGTTACCATTTTTCTTTCTC+TGG | + | chr4.3:41414563-41414582 | None:intergenic | 30.0% |
| !!! | GAGTTGTTACCTCTTTTTTA+AGG | - | chr4.3:41412041-41412060 | MS.gene65276:CDS | 30.0% |
| !!! | TCAAGATTACCTTGTTTTTG+GGG | + | chr4.3:41411608-41411627 | None:intergenic | 30.0% |
| AAACACTTGTGAGACTGTTT+GGG | + | chr4.3:41412715-41412734 | None:intergenic | 35.0% | |
| AAATGGAAAGCGAACTAAGA+AGG | - | chr4.3:41414376-41414395 | MS.gene65276:intron | 35.0% | |
| AAGTTATACAATGCCCAGTT+TGG | + | chr4.3:41412842-41412861 | None:intergenic | 35.0% | |
| AGAGTTGAAGGCTAATCTAA+TGG | - | chr4.3:41413969-41413988 | MS.gene65276:intron | 35.0% | |
| AGATGATTTGAAGAAGGTGA+AGG | - | chr4.3:41413018-41413037 | MS.gene65276:CDS | 35.0% | |
| ATCAGAATCACTTTCTCAGA+TGG | - | chr4.3:41413408-41413427 | MS.gene65276:intron | 35.0% | |
| CAGTTCCTTTCACACATAAA+TGG | + | chr4.3:41412215-41412234 | None:intergenic | 35.0% | |
| CATGATTATGCATTTAGGCA+AGG | + | chr4.3:41411938-41411957 | None:intergenic | 35.0% | |
| CATTTAGGCAAGGTGATAAA+AGG | + | chr4.3:41411928-41411947 | None:intergenic | 35.0% | |
| GAAAATCAACAAGAGTTGCT+TGG | - | chr4.3:41414197-41414216 | MS.gene65276:intron | 35.0% | |
| GGATGATTGTAAATTCGAGA+AGG | - | chr4.3:41413699-41413718 | MS.gene65276:CDS | 35.0% | |
| TAAACACTTGTGAGACTGTT+TGG | + | chr4.3:41412716-41412735 | None:intergenic | 35.0% | |
| TCAAACTCAACAAGCTGAAT+CGG | - | chr4.3:41413351-41413370 | MS.gene65276:intron | 35.0% | |
| TCACTCTGTTCAAAATCTTG+TGG | - | chr4.3:41413678-41413697 | MS.gene65276:intron | 35.0% | |
| TCATAGGTTTCTTCAACAAG+AGG | + | chr4.3:41411780-41411799 | None:intergenic | 35.0% | |
| TCTTAGTTCGCTTTCCATTT+CGG | + | chr4.3:41414376-41414395 | None:intergenic | 35.0% | |
| TTAAGGTACAGTCTGATCAA+TGG | - | chr4.3:41414400-41414419 | MS.gene65276:intron | 35.0% | |
| TTTATGTGTGAAAGGAACTG+AGG | - | chr4.3:41412215-41412234 | MS.gene65276:CDS | 35.0% | |
| ! | CCAATTCAGATATTTTGCTC+GGG | + | chr4.3:41412976-41412995 | None:intergenic | 35.0% |
| ! | GTTGATGGAGCAGATAAAAT+CGG | - | chr4.3:41413885-41413904 | MS.gene65276:intron | 35.0% |
| ! | TGAAGAAGTTTGGAGTCTTA+TGG | - | chr4.3:41414586-41414605 | MS.gene65276:intron | 35.0% |
| ! | TTTTGAATCCTGACTAAGAG+AGG | - | chr4.3:41411718-41411737 | MS.gene65276:CDS | 35.0% |
| !! | GTTCTTTGCTATTCTTGAGT+TGG | + | chr4.3:41413447-41413466 | None:intergenic | 35.0% |
| !! | TGGTAAAAACTTGTTACCTC+AGG | + | chr4.3:41412531-41412550 | None:intergenic | 35.0% |
| !! | TGTTCTTTGAAGTCTGAGAT+TGG | - | chr4.3:41413775-41413794 | MS.gene65276:CDS | 35.0% |
| !!! | GTTTCCTTTTTGGTTGAAGT+AGG | - | chr4.3:41411977-41411996 | MS.gene65276:CDS | 35.0% |
| AAAAGAGGTAACAACTCCCT+TGG | + | chr4.3:41412038-41412057 | None:intergenic | 40.0% | |
| AAAGAACCGTCGAGATTCTA+AGG | - | chr4.3:41413524-41413543 | MS.gene65276:intron | 40.0% | |
| AAAGAGGTAACAACTCCCTT+GGG | + | chr4.3:41412037-41412056 | None:intergenic | 40.0% | |
| AAGAACCGTCGAGATTCTAA+GGG | - | chr4.3:41413525-41413544 | MS.gene65276:intron | 40.0% | |
| AAGATTTGTGCCTGAGTTTC+AGG | + | chr4.3:41413469-41413488 | None:intergenic | 40.0% | |
| AAGCGAACTAAGAAGGCTTA+AGG | - | chr4.3:41414383-41414402 | MS.gene65276:intron | 40.0% | |
| ATCTCCCATTCCTCAGTTAA+AGG | + | chr4.3:41412009-41412028 | None:intergenic | 40.0% | |
| ATGTTCCAACTCCAAAGCAA+TGG | + | chr4.3:41413584-41413603 | None:intergenic | 40.0% | |
| CACATTGCTAGCATTGCTTT+CGG | - | chr4.3:41412884-41412903 | MS.gene65276:CDS | 40.0% | |
| CCCGAGCAAAATATCTGAAT+TGG | - | chr4.3:41412973-41412992 | MS.gene65276:CDS | 40.0% | |
| CGAAGAAGAAGATACAGAGT+CGG | + | chr4.3:41412436-41412455 | None:intergenic | 40.0% | |
| GAGCAGATAAAATCGGAATC+AGG | - | chr4.3:41413892-41413911 | MS.gene65276:intron | 40.0% | |
| GGAACCTACTTCAACCAAAA+AGG | + | chr4.3:41411984-41412003 | None:intergenic | 40.0% | |
| GGTAACATGCTGAAGAAGTT+TGG | - | chr4.3:41414576-41414595 | MS.gene65276:intron | 40.0% | |
| TAACTGAGGAATGGGAGATT+GGG | - | chr4.3:41412010-41412029 | MS.gene65276:CDS | 40.0% | |
| TACTGAGAGATCTGTGTCTT+TGG | - | chr4.3:41414479-41414498 | MS.gene65276:intron | 40.0% | |
| TAGCAAAGAACCTGAAACTC+AGG | - | chr4.3:41413456-41413475 | MS.gene65276:intron | 40.0% | |
| TCTCCCATTCCTCAGTTAAA+GGG | + | chr4.3:41412008-41412027 | None:intergenic | 40.0% | |
| TGCTTTGTCTTCTGCATTGA+AGG | - | chr4.3:41413276-41413295 | MS.gene65276:intron | 40.0% | |
| TGTAGATACCTCTCTTAGTC+AGG | + | chr4.3:41411729-41411748 | None:intergenic | 40.0% | |
| TTAACTGAGGAATGGGAGAT+TGG | - | chr4.3:41412009-41412028 | MS.gene65276:CDS | 40.0% | |
| TTCCATGATACCTTGCAACT+CGG | + | chr4.3:41414004-41414023 | None:intergenic | 40.0% | |
| ! | CACGTTCTTCTGTGATTTTC+TGG | + | chr4.3:41413198-41413217 | None:intergenic | 40.0% |
| ! | CTTGAATTGGTAGCTACTTG+TGG | - | chr4.3:41413322-41413341 | MS.gene65276:intron | 40.0% |
| ! | GAAGGCTAATCTAATGGACA+AGG | - | chr4.3:41413975-41413994 | MS.gene65276:intron | 40.0% |
| ! | GCTGAAAGCACAACTTGAAT+TGG | - | chr4.3:41413309-41413328 | MS.gene65276:intron | 40.0% |
| ! | TATCTAGAGCTATGTGCTAC+TGG | - | chr4.3:41413151-41413170 | MS.gene65276:CDS | 40.0% |
| !! | AAACTTGTTACCTCAGGAAC+TGG | + | chr4.3:41412525-41412544 | None:intergenic | 40.0% |
| !! | AACTTGTTACCTCAGGAACT+GGG | + | chr4.3:41412524-41412543 | None:intergenic | 40.0% |
| !! | ACTCTTCGAGTTTTCCAGAT+AGG | + | chr4.3:41413120-41413139 | None:intergenic | 40.0% |
| !! | AGTTGGAACATTCTAGAGCA+AGG | - | chr4.3:41413593-41413612 | MS.gene65276:intron | 40.0% |
| !! | CTCTTCGAGTTTTCCAGATA+GGG | + | chr4.3:41413119-41413138 | None:intergenic | 40.0% |
| !! | CTTTGAAGTCTGAGATTGGA+CGG | - | chr4.3:41413779-41413798 | MS.gene65276:CDS | 40.0% |
| !! | GTTGGAACATTCTAGAGCAA+GGG | - | chr4.3:41413594-41413613 | MS.gene65276:intron | 40.0% |
| ACAGTCTGATCAATGGAGGA+AGG | - | chr4.3:41414407-41414426 | MS.gene65276:intron | 45.0% | |
| AGACAGAAGCAACCGTAAAG+TGG | - | chr4.3:41414308-41414327 | MS.gene65276:intron | 45.0% | |
| AGAGGAAATAGAGAAAGCCG+AGG | - | chr4.3:41414236-41414255 | MS.gene65276:intron | 45.0% | |
| AGGTACAGTCTGATCAATGG+AGG | - | chr4.3:41414403-41414422 | MS.gene65276:intron | 45.0% | |
| AGTCAACTGAGAGATGCTGT+TGG | + | chr4.3:41413252-41413271 | None:intergenic | 45.0% | |
| ATGATTTCGGCAGGGAACAA+TGG | - | chr4.3:41414450-41414469 | MS.gene65276:intron | 45.0% | |
| CAACAAGAGGTCATCGTATC+AGG | + | chr4.3:41411767-41411786 | None:intergenic | 45.0% | |
| CCTCCCTTTAACTGAGGAAT+GGG | - | chr4.3:41412002-41412021 | MS.gene65276:CDS | 45.0% | |
| CTTCAGCATCTCGTTCTCTT+CGG | + | chr4.3:41414175-41414194 | None:intergenic | 45.0% | |
| GAGTAGTCGTAGTTCTCAGT+TGG | + | chr4.3:41412407-41412426 | None:intergenic | 45.0% | |
| GGATGACAGTAAAGTGAGAG+AGG | - | chr4.3:41414218-41414237 | MS.gene65276:intron | 45.0% | |
| GTCAACTGAGAGATGCTGTT+GGG | + | chr4.3:41413251-41413270 | None:intergenic | 45.0% | |
| GTCATCCCTTAGAATCTCGA+CGG | + | chr4.3:41413533-41413552 | None:intergenic | 45.0% | |
| TACGAAACTCGGGATTGTGA+TGG | - | chr4.3:41414278-41414297 | MS.gene65276:intron | 45.0% | |
| TAGGGCTAAGAGTTGCTCTT+TGG | + | chr4.3:41413101-41413120 | None:intergenic | 45.0% | |
| TAGGTTCCTCCCTTTAACTG+AGG | - | chr4.3:41411996-41412015 | MS.gene65276:CDS | 45.0% | |
| TCCTCCCTTTAACTGAGGAA+TGG | - | chr4.3:41412001-41412020 | MS.gene65276:CDS | 45.0% | |
| TGATTTCGGCAGGGAACAAT+GGG | - | chr4.3:41414451-41414470 | MS.gene65276:intron | 45.0% | |
| ! | AACCGAGTTGCAAGGTATCA+TGG | - | chr4.3:41413999-41414018 | MS.gene65276:intron | 45.0% |
| ! | CAGAAGTGGTTCTTCTGAAG+TGG | - | chr4.3:41412350-41412369 | MS.gene65276:CDS | 45.0% |
| !! | CAACTCCATTGCTTTGGAGT+TGG | - | chr4.3:41413576-41413595 | MS.gene65276:intron | 45.0% |
| !! | TTGTGCTGCTTCTAACTGCT+CGG | + | chr4.3:41414343-41414362 | None:intergenic | 45.0% |
| !! | TATAATTAAAGATAAATTAA+AGG | - | chr4.3:41412634-41412653 | MS.gene65276:CDS | 5.0% |
| !!! | TTTTTTTATTTTTTTTTCAT+AGG | + | chr4.3:41411796-41411815 | None:intergenic | 5.0% |
| AAGCAACCGTAAAGTGGCGA+GGG | - | chr4.3:41414314-41414333 | MS.gene65276:intron | 50.0% | |
| AATGGGAGATTGGGACCCAA+GGG | - | chr4.3:41412019-41412038 | MS.gene65276:CDS | 50.0% | |
| ACAAGTGGCAAGCTCCGAAA+TGG | - | chr4.3:41414359-41414378 | MS.gene65276:intron | 50.0% | |
| AGGCCAGAGACAATGTGAGT+TGG | - | chr4.3:41413912-41413931 | MS.gene65276:intron | 50.0% | |
| CCCATTCCTCAGTTAAAGGG+AGG | + | chr4.3:41412005-41412024 | None:intergenic | 50.0% | |
| CCTCCAACTCACATTGTCTC+TGG | + | chr4.3:41413918-41413937 | None:intergenic | 50.0% | |
| CTGCTGCTATGATTTCGGCA+GGG | - | chr4.3:41414442-41414461 | MS.gene65276:intron | 50.0% | |
| GAAACTCGGGATTGTGATGG+AGG | - | chr4.3:41414281-41414300 | MS.gene65276:intron | 50.0% | |
| GACAAGGAAACCGAGTTGCA+AGG | - | chr4.3:41413991-41414010 | MS.gene65276:intron | 50.0% | |
| GAGCAACTCTTAGCCCTATC+TGG | - | chr4.3:41413103-41413122 | MS.gene65276:CDS | 50.0% | |
| GCACGCGGAGAAACTTTCTT+AGG | + | chr4.3:41412378-41412397 | None:intergenic | 50.0% | |
| GCAGTTAGAAGCAGCACAAG+TGG | - | chr4.3:41414344-41414363 | MS.gene65276:intron | 50.0% | |
| GGCAGCTGCTGCTATGATTT+CGG | - | chr4.3:41414437-41414456 | MS.gene65276:intron | 50.0% | |
| TGGCTGCAACTCCATTGCTT+TGG | - | chr4.3:41413570-41413589 | MS.gene65276:intron | 50.0% | |
| ! | ACGTGATAGCGCATGGAAGT+CGG | - | chr4.3:41413213-41413232 | MS.gene65276:CDS | 50.0% |
| ! | CAGAAGAACGTGATAGCGCA+TGG | - | chr4.3:41413206-41413225 | MS.gene65276:CDS | 50.0% |
| ! | CAGCAATGCGTACGAGTTGA+TGG | - | chr4.3:41413870-41413889 | MS.gene65276:intron | 50.0% |
| ! | CCAGAGACAATGTGAGTTGG+AGG | - | chr4.3:41413915-41413934 | MS.gene65276:intron | 50.0% |
| ! | TGACTTGCGATCAGCGAGTT+TGG | + | chr4.3:41412493-41412512 | None:intergenic | 50.0% |
| ACCTCAGGAACTGGGCTTCT+GGG | + | chr4.3:41412516-41412535 | None:intergenic | 55.0% | |
| GAAGCAACCGTAAAGTGGCG+AGG | - | chr4.3:41414313-41414332 | MS.gene65276:intron | 55.0% | |
| GAATGGGAGATTGGGACCCA+AGG | - | chr4.3:41412018-41412037 | MS.gene65276:CDS | 55.0% | |
| GACGTTGCGAGAGACGTAGA+TGG | - | chr4.3:41413550-41413569 | MS.gene65276:intron | 55.0% | |
| GCAAGCTCAGCAAGACTTCG+AGG | - | chr4.3:41413072-41413091 | MS.gene65276:CDS | 55.0% | |
| GCTGCTGCTATGATTTCGGC+AGG | - | chr4.3:41414441-41414460 | MS.gene65276:intron | 55.0% | |
| TACCTCAGGAACTGGGCTTC+TGG | + | chr4.3:41412517-41412536 | None:intergenic | 55.0% | |
| TCAATGGAGGAAGGCTGCAG+AGG | - | chr4.3:41414416-41414435 | MS.gene65276:intron | 55.0% | |
| ACCCAGAAGCCCAGTTCCTG+AGG | - | chr4.3:41412512-41412531 | MS.gene65276:CDS | 60.0% | |
| CGCGAGGCGGTTACGAAACT+CGG | - | chr4.3:41414267-41414286 | MS.gene65276:intron | 60.0% | |
| CTCAGTTGGCGTACAGCACG+CGG | + | chr4.3:41412393-41412412 | None:intergenic | 60.0% | |
| GCGAGGCGGTTACGAAACTC+GGG | - | chr4.3:41414268-41414287 | MS.gene65276:intron | 60.0% | |
| ! | CGGTCACCCTCGCCACTTTA+CGG | + | chr4.3:41414323-41414342 | None:intergenic | 60.0% |
| AGCCGAGGCTGCAAAACGCG+AGG | - | chr4.3:41414251-41414270 | MS.gene65276:intron | 65.0% | |
| CGAGGCTGCAAAACGCGAGG+CGG | - | chr4.3:41414254-41414273 | MS.gene65276:intron | 65.0% | |
| ! | CGCCTCGCGTTTTGCAGCCT+CGG | + | chr4.3:41414256-41414275 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 41411598 | 41414626 | 41411598 | ID=MS.gene65276 |
| chr4.3 | mRNA | 41411598 | 41414626 | 41411598 | ID=MS.gene65276.t1;Parent=MS.gene65276 |
| chr4.3 | exon | 41414607 | 41414626 | 41414607 | ID=MS.gene65276.t1.exon1;Parent=MS.gene65276.t1 |
| chr4.3 | CDS | 41414607 | 41414626 | 41414607 | ID=cds.MS.gene65276.t1;Parent=MS.gene65276.t1 |
| chr4.3 | exon | 41413691 | 41413871 | 41413691 | ID=MS.gene65276.t1.exon2;Parent=MS.gene65276.t1 |
| chr4.3 | CDS | 41413691 | 41413871 | 41413691 | ID=cds.MS.gene65276.t1;Parent=MS.gene65276.t1 |
| chr4.3 | exon | 41411598 | 41413259 | 41411598 | ID=MS.gene65276.t1.exon3;Parent=MS.gene65276.t1 |
| chr4.3 | CDS | 41411598 | 41413259 | 41411598 | ID=cds.MS.gene65276.t1;Parent=MS.gene65276.t1 |
| Gene Sequence |
| Protein sequence |
