Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015298.t1 | XP_003611508.1 | 99.2 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 1.80E-197 | 698.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015298.t1 | P37228 | 85.8 | 358 | 46 | 1 | 1 | 358 | 1 | 353 | 5.7e-168 | 591.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015298.t1 | G7K140 | 99.2 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 1.3e-197 | 698.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015298 | MS.gene40601 | PPI |
| MS.gene015298 | MS.gene028531 | PPI |
| MS.gene015298 | MS.gene025802 | PPI |
| MS.gene015298 | MS.gene09966 | PPI |
| MS.gene015298 | MS.gene025803 | PPI |
| MS.gene015298 | MS.gene015443 | PPI |
| MS.gene015298 | MS.gene40108 | PPI |
| MS.gene015298 | MS.gene21162 | PPI |
| MS.gene015298 | MS.gene053632 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015298.t1 | MTR_5g014710 | 99.162 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 0.0 | 725 |
| MS.gene015298.t1 | MTR_4g092690 | 80.168 | 358 | 69 | 1 | 1 | 358 | 1 | 356 | 0.0 | 592 |
| MS.gene015298.t1 | MTR_8g463760 | 65.705 | 312 | 106 | 1 | 45 | 355 | 29 | 340 | 1.08e-146 | 418 |
| MS.gene015298.t1 | MTR_8g463760 | 70.526 | 190 | 56 | 0 | 45 | 234 | 29 | 218 | 2.23e-91 | 274 |
| MS.gene015298.t1 | MTR_2g021700 | 80.000 | 60 | 12 | 0 | 204 | 263 | 43 | 102 | 4.48e-27 | 104 |
| MS.gene015298.t1 | MTR_2g045010 | 80.000 | 60 | 12 | 0 | 204 | 263 | 43 | 102 | 4.48e-27 | 104 |
| MS.gene015298.t1 | MTR_4g033285 | 81.481 | 54 | 10 | 0 | 204 | 257 | 43 | 96 | 3.60e-24 | 95.5 |
| MS.gene015298.t1 | MTR_5g012390 | 24.710 | 259 | 160 | 11 | 48 | 286 | 39 | 282 | 7.54e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015298.t1 | AT2G22780 | 82.906 | 351 | 60 | 0 | 8 | 358 | 4 | 354 | 0.0 | 598 |
| MS.gene015298.t1 | AT5G09660 | 78.771 | 358 | 72 | 1 | 1 | 358 | 1 | 354 | 0.0 | 556 |
| MS.gene015298.t1 | AT5G09660 | 78.492 | 358 | 72 | 2 | 1 | 358 | 1 | 353 | 0.0 | 550 |
| MS.gene015298.t1 | AT5G09660 | 83.540 | 322 | 53 | 0 | 37 | 358 | 12 | 333 | 0.0 | 541 |
| MS.gene015298.t1 | AT5G09660 | 80.263 | 304 | 56 | 1 | 1 | 304 | 1 | 300 | 8.55e-171 | 480 |
| MS.gene015298.t1 | AT5G09660 | 86.194 | 268 | 37 | 0 | 37 | 304 | 12 | 279 | 3.23e-165 | 465 |
| MS.gene015298.t1 | AT1G53240 | 66.456 | 316 | 106 | 0 | 40 | 355 | 23 | 338 | 3.22e-152 | 432 |
| MS.gene015298.t1 | AT3G15020 | 67.203 | 311 | 102 | 0 | 45 | 355 | 28 | 338 | 6.58e-151 | 429 |
| MS.gene015298.t1 | AT3G47520 | 63.754 | 309 | 110 | 1 | 47 | 353 | 83 | 391 | 3.96e-143 | 411 |
| MS.gene015298.t1 | AT3G15020 | 67.518 | 274 | 89 | 0 | 45 | 318 | 28 | 301 | 1.67e-131 | 379 |
| MS.gene015298.t1 | AT3G53910 | 32.584 | 89 | 58 | 1 | 272 | 358 | 6 | 94 | 1.91e-12 | 63.5 |
Find 100 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGAATTTGCATATGAATT+TGG | 0.129618 | 5.4:+8495511 | None:intergenic |
| AGGATTCAAAGTTGCGATTT+TGG | 0.162640 | 5.4:-8495282 | MS.gene015298:CDS |
| GCTTGTTGCTAACTCTTTCT+TGG | 0.221091 | 5.4:+8491108 | None:intergenic |
| CTCTTGTCATTCCAGGTTTA+CGG | 0.229245 | 5.4:+8494079 | None:intergenic |
| TCAAGTACTCAATTTCCTTT+GGG | 0.248840 | 5.4:+8492477 | None:intergenic |
| CAGCTTGAGGATGCACTTAC+AGG | 0.286947 | 5.4:-8494135 | MS.gene015298:CDS |
| GCATGTCTTCGTGCGTTAAA+AGG | 0.298065 | 5.4:-8491542 | MS.gene015298:CDS |
| TTGACAGATCGCATACAAAA+TGG | 0.300388 | 5.4:-8492458 | MS.gene015298:CDS |
| GTCAAGTACTCAATTTCCTT+TGG | 0.312990 | 5.4:+8492476 | None:intergenic |
| ATATTTCAACAGGGCAAGTT+TGG | 0.323504 | 5.4:-8491137 | MS.gene015298:intron |
| TGTTTAGGTTCGAGGATTCT+TGG | 0.325611 | 5.4:-8494166 | MS.gene015298:intron |
| GTTTAGGTTCGAGGATTCTT+GGG | 0.338537 | 5.4:-8494165 | MS.gene015298:intron |
| ATGTGGATGTTCCAGTTGTC+GGG | 0.341310 | 5.4:-8492664 | MS.gene015298:CDS |
| AGATCATCTCTTGTCATTCC+AGG | 0.341489 | 5.4:+8494072 | None:intergenic |
| TAAAATTCAGGCTGAAGTTA+TGG | 0.356116 | 5.4:-8492702 | MS.gene015298:intron |
| TCTTGTCATTCCAGGTTTAC+GGG | 0.357597 | 5.4:+8494080 | None:intergenic |
| TGCAGATCCAGCTCCAGCTT+TGG | 0.369553 | 5.4:+8491881 | None:intergenic |
| TGCACTTACAGGTATGGATT+TGG | 0.375153 | 5.4:-8494124 | MS.gene015298:CDS |
| TGACAATGCTTGACGTGGTT+AGG | 0.381452 | 5.4:-8493882 | MS.gene015298:CDS |
| TTGAAAACCTCAGCCGCAAT+AGG | 0.389125 | 5.4:+8493943 | None:intergenic |
| CACTGTTCCTATTGCGGCTG+AGG | 0.396544 | 5.4:-8493950 | MS.gene015298:CDS |
| AAGAGGTAAAATCGTGATTC+CGG | 0.396845 | 5.4:+8492634 | None:intergenic |
| CTCTAGGCCAAAGCTGGAGC+TGG | 0.397270 | 5.4:-8491888 | MS.gene015298:intron |
| AAAATTCAGGCTGAAGTTAT+GGG | 0.399622 | 5.4:-8492701 | MS.gene015298:intron |
| GTTGAGGAATTTCTTCCTCT+TGG | 0.402166 | 5.4:-8491268 | MS.gene015298:CDS |
| ATAGGAACAGTGGAGTTAAC+TGG | 0.409234 | 5.4:+8493961 | None:intergenic |
| GTCACTCCCAACAGTCTCTT+GGG | 0.415028 | 5.4:+8493901 | None:intergenic |
| CAACAGGGCAAGTTTGGAAA+AGG | 0.416141 | 5.4:-8491131 | MS.gene015298:intron |
| TGTCACTCCCAACAGTCTCT+TGG | 0.418692 | 5.4:+8493900 | None:intergenic |
| CATACCTCTCATAATCACTT+AGG | 0.429482 | 5.4:+8491242 | None:intergenic |
| ATGTTCATTGCCGTGCCAAA+GGG | 0.429704 | 5.4:-8495313 | MS.gene015298:CDS |
| GATCTCTTCAATATTAATGC+TGG | 0.432800 | 5.4:-8494054 | MS.gene015298:CDS |
| GATTTGGTAATCATTCCTGC+TGG | 0.434549 | 5.4:-8494108 | MS.gene015298:CDS |
| TGACAGATCGCATACAAAAT+GGG | 0.435560 | 5.4:-8492457 | MS.gene015298:CDS |
| GATGTGGATGTTCCAGTTGT+CGG | 0.439876 | 5.4:-8492665 | MS.gene015298:CDS |
| GTTAGCAACAAGCGTGGAGA+AGG | 0.441857 | 5.4:-8491098 | MS.gene015298:CDS |
| GACAATGCTTGACGTGGTTA+GGG | 0.451116 | 5.4:-8493881 | MS.gene015298:CDS |
| ATACCTCTCATAATCACTTA+GGG | 0.455021 | 5.4:+8491243 | None:intergenic |
| TTGGGTGCTGCTGGTGGCAT+AGG | 0.470171 | 5.4:-8495263 | MS.gene015298:CDS |
| ATCTTCATCAACATAGAAAG+AGG | 0.476416 | 5.4:+8495236 | None:intergenic |
| ATCTCTTCAATATTAATGCT+GGG | 0.478335 | 5.4:-8494053 | MS.gene015298:CDS |
| ATTTGGTAATCATTCCTGCT+GGG | 0.479832 | 5.4:-8494107 | MS.gene015298:CDS |
| CATACATACCACAAACGTAT+TGG | 0.480102 | 5.4:+8493858 | None:intergenic |
| TATGATCCCAAGAGACTGTT+GGG | 0.480871 | 5.4:-8493907 | MS.gene015298:CDS |
| TATGATGTCGTTAATACTCC+TGG | 0.481340 | 5.4:-8495185 | MS.gene015298:CDS |
| ATCAAGTTTACAATCGCCTT+AGG | 0.482390 | 5.4:+8493991 | None:intergenic |
| GCTGGGGTTCCCCGTAAACC+TGG | 0.485146 | 5.4:-8494090 | MS.gene015298:CDS |
| ATGTGCATATGTTGATTCAC+AGG | 0.490249 | 5.4:-8491501 | MS.gene015298:intron |
| TGAGGATGCACTTACAGGTA+TGG | 0.495906 | 5.4:-8494130 | MS.gene015298:CDS |
| GGTTAGGGCCAATACGTTTG+TGG | 0.497203 | 5.4:-8493866 | MS.gene015298:intron |
| CCTTGAGATTGGGAGGATTG+AGG | 0.501008 | 5.4:+8495467 | None:intergenic |
| GGTTTACGGGGAACCCCAGC+AGG | 0.501240 | 5.4:+8494093 | None:intergenic |
| AATTTCCTTTGGGGTGAAAG+AGG | 0.509427 | 5.4:+8492487 | None:intergenic |
| TGGATCTGCAACACTATCAA+TGG | 0.512103 | 5.4:-8491868 | MS.gene015298:intron |
| AATGTTCATTGCCGTGCCAA+AGG | 0.520173 | 5.4:-8495314 | MS.gene015298:CDS |
| TCCTTTGGGGTGAAAGAGGA+AGG | 0.520708 | 5.4:+8492491 | None:intergenic |
| ACTGGAACATCCACATCCCT+TGG | 0.525779 | 5.4:+8492671 | None:intergenic |
| GTTGATGAAGATGAATCCAT+TGG | 0.529675 | 5.4:-8495225 | MS.gene015298:CDS |
| AAAATCGCAACTTTGAATCC+TGG | 0.532660 | 5.4:+8495284 | None:intergenic |
| ACCTTCCTCTTTCACCCCAA+AGG | 0.539622 | 5.4:-8492492 | MS.gene015298:CDS |
| GAAATTCCTCAACTCCGTTA+CGG | 0.539768 | 5.4:+8491278 | None:intergenic |
| AAAGTACGACTTGGCCGTAA+CGG | 0.543008 | 5.4:-8491292 | MS.gene015298:CDS |
| TAACTCCACTGTTCCTATTG+CGG | 0.545645 | 5.4:-8493956 | MS.gene015298:CDS |
| AAGTTATGGGTCTTGATCCA+AGG | 0.546437 | 5.4:-8492688 | MS.gene015298:CDS |
| ATTGGGAGGATTGAGGTGGC+TGG | 0.548918 | 5.4:+8495474 | None:intergenic |
| GATTGCAAAGCGATGTCCTA+AGG | 0.560507 | 5.4:-8494007 | MS.gene015298:CDS |
| TTTGGTAATCATTCCTGCTG+GGG | 0.563841 | 5.4:-8494106 | MS.gene015298:CDS |
| TTATGATCCCAAGAGACTGT+TGG | 0.575018 | 5.4:-8493908 | MS.gene015298:CDS |
| GGGTCTTGATCCAAGGGATG+TGG | 0.578747 | 5.4:-8492681 | MS.gene015298:CDS |
| TTTGCATCAAAAGTACGACT+TGG | 0.583080 | 5.4:-8491301 | MS.gene015298:CDS |
| CAAGTACTCAATTTCCTTTG+GGG | 0.586894 | 5.4:+8492478 | None:intergenic |
| CTGATATCAGAAGTAACACC+AGG | 0.589402 | 5.4:+8495167 | None:intergenic |
| GACAGATCGCATACAAAATG+GGG | 0.591432 | 5.4:-8492456 | MS.gene015298:CDS |
| TTAGCAACAAGCGTGGAGAA+GGG | 0.591626 | 5.4:-8491097 | MS.gene015298:CDS |
| TTTAGGTTCGAGGATTCTTG+GGG | 0.597375 | 5.4:-8494164 | MS.gene015298:intron |
| CTTGTCATTCCAGGTTTACG+GGG | 0.597794 | 5.4:+8494081 | None:intergenic |
| TGTGGATGTTCCAGTTGTCG+GGG | 0.603494 | 5.4:-8492663 | MS.gene015298:CDS |
| AGATGAAGAACAGAAACCAA+TGG | 0.604683 | 5.4:+8495209 | None:intergenic |
| AGTTATGGGTCTTGATCCAA+GGG | 0.605244 | 5.4:-8492687 | MS.gene015298:CDS |
| ACTTGGCCGTAACGGAGTTG+AGG | 0.606364 | 5.4:-8491284 | MS.gene015298:CDS |
| GTGCAGACCTGAGAAAGAAG+AGG | 0.606511 | 5.4:+8492617 | None:intergenic |
| CTTGGGGCAAAATCAGCTTG+AGG | 0.607236 | 5.4:-8494148 | MS.gene015298:CDS |
| AAACGTACCTTGAGATTGGG+AGG | 0.611382 | 5.4:+8495460 | None:intergenic |
| TACTTCTGATATCAGTCACA+TGG | 0.612010 | 5.4:-8495159 | MS.gene015298:CDS |
| CCTCAATCCTCCCAATCTCA+AGG | 0.621292 | 5.4:-8495467 | MS.gene015298:intron |
| GAAAGAGTTAGCAACAAGCG+TGG | 0.628742 | 5.4:-8491104 | MS.gene015298:CDS |
| GTTCATTGCCGTGCCAAAGG+GGG | 0.629166 | 5.4:-8495311 | MS.gene015298:CDS |
| TGTTCATTGCCGTGCCAAAG+GGG | 0.630055 | 5.4:-8495312 | MS.gene015298:CDS |
| GTCCCCTAAGTGATTATGAG+AGG | 0.633118 | 5.4:-8491246 | MS.gene015298:intron |
| CTCAGCCGCAATAGGAACAG+TGG | 0.637103 | 5.4:+8493951 | None:intergenic |
| TTTGGGGTGAAAGAGGAAGG+TGG | 0.646297 | 5.4:+8492494 | None:intergenic |
| GTGGATGTTCCAGTTGTCGG+GGG | 0.647147 | 5.4:-8492662 | MS.gene015298:CDS |
| TCTTCGTGCGTTAAAAGGAG+AGG | 0.660276 | 5.4:-8491537 | MS.gene015298:CDS |
| TAATCACTTAGGGGACCAAG+AGG | 0.668806 | 5.4:+8491253 | None:intergenic |
| TGAGATTGGGAGGATTGAGG+TGG | 0.679990 | 5.4:+8495470 | None:intergenic |
| TACCTCTCATAATCACTTAG+GGG | 0.681098 | 5.4:+8491244 | None:intergenic |
| GGGAGTGACAATGCTTGACG+TGG | 0.697199 | 5.4:-8493887 | MS.gene015298:CDS |
| ACAGATCGCATACAAAATGG+GGG | 0.720421 | 5.4:-8492455 | MS.gene015298:CDS |
| GTTATGTAGATGAATGAACA+TGG | 0.725435 | 5.4:-8495353 | MS.gene015298:intron |
| ATGTAGATGAATGAACATGG+TGG | 0.812154 | 5.4:-8495350 | MS.gene015298:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTGAATATAAATAGAT+GGG | - | chr5.4:8494755-8494774 | MS.gene015298:intron | 10.0% |
| !!! | TTATTTTGAATATAAATAGA+TGG | - | chr5.4:8494754-8494773 | MS.gene015298:intron | 10.0% |
| !! | AAGTAAGAAATTAAATCTTT+GGG | - | chr5.4:8492922-8492941 | MS.gene015298:intron | 15.0% |
| !! | TAAGTAAGAAATTAAATCTT+TGG | - | chr5.4:8492921-8492940 | MS.gene015298:intron | 15.0% |
| !! | TTAATTCCATTAATAAGTAT+AGG | + | chr5.4:8494791-8494810 | None:intergenic | 15.0% |
| !! | TTATTTCGTGATTTATAATT+TGG | - | chr5.4:8491489-8491508 | MS.gene015298:intron | 15.0% |
| !!! | ATATGTTGACTTAAATTATA+TGG | - | chr5.4:8494308-8494327 | MS.gene015298:intron | 15.0% |
| !!! | ATTAGAATCTTTTAAAACTA+TGG | + | chr5.4:8495170-8495189 | None:intergenic | 15.0% |
| !! | AACATTGGAATATTAGATAT+CGG | + | chr5.4:8494226-8494245 | None:intergenic | 20.0% |
| !! | AATCTTAAAAATACTTTAGC+TGG | - | chr5.4:8493294-8493313 | MS.gene015298:intron | 20.0% |
| !! | ACATATAAGAAAAACAATTG+TGG | - | chr5.4:8494848-8494867 | MS.gene015298:intron | 20.0% |
| !! | ACTCAAGTAATTAATATTGT+TGG | - | chr5.4:8493254-8493273 | MS.gene015298:intron | 20.0% |
| !! | ATATCTACTTATATTTCAAC+AGG | - | chr5.4:8495445-8495464 | MS.gene015298:intron | 20.0% |
| !! | ATTCAAAGATCATCATAAAT+TGG | + | chr5.4:8492962-8492981 | None:intergenic | 20.0% |
| !! | ATTTGTGCAAATTTGATTAT+CGG | - | chr5.4:8491623-8491642 | MS.gene015298:intron | 20.0% |
| !! | CCAAAAAAGTAATAAATGAA+TGG | - | chr5.4:8494817-8494836 | MS.gene015298:intron | 20.0% |
| !! | TAAAATAATCAAATCCAAAC+AGG | - | chr5.4:8492301-8492320 | MS.gene015298:intron | 20.0% |
| !! | TATCTACTTATATTTCAACA+GGG | - | chr5.4:8495446-8495465 | MS.gene015298:intron | 20.0% |
| !! | TTTATGATGATCTTTGAATA+TGG | - | chr5.4:8492963-8492982 | MS.gene015298:intron | 20.0% |
| !!! | ATTTCTTACTTAAAGTATCA+TGG | + | chr5.4:8492913-8492932 | None:intergenic | 20.0% |
| !!! | CCATTCATTTATTACTTTTT+TGG | + | chr5.4:8494820-8494839 | None:intergenic | 20.0% |
| !!! | CTTATTTTTATAAGAGTGTT+AGG | + | chr5.4:8492222-8492241 | None:intergenic | 20.0% |
| !!! | CTTTAATTTTTCTATATGCA+GGG | - | chr5.4:8494490-8494509 | MS.gene015298:intron | 20.0% |
| !!! | TATTTTATTAGGTGAAATCA+AGG | + | chr5.4:8492176-8492195 | None:intergenic | 20.0% |
| !!! | TCATTTTTACATGTATCAAT+AGG | + | chr5.4:8495411-8495430 | None:intergenic | 20.0% |
| !!! | TGAATAAGTACTTTTTCTTA+AGG | - | chr5.4:8495230-8495249 | MS.gene015298:CDS | 20.0% |
| !!! | TTGTTACCATATTTGATTTT+AGG | - | chr5.4:8494020-8494039 | MS.gene015298:CDS | 20.0% |
| !!! | TTTCTTACTTAAAGTATCAT+GGG | + | chr5.4:8492912-8492931 | None:intergenic | 20.0% |
| ! | ACAAAAACTAGATGATTAGA+TGG | + | chr5.4:8493716-8493735 | None:intergenic | 25.0% |
| ! | ATCTCTTCAATATTAATGCT+GGG | - | chr5.4:8492539-8492558 | MS.gene015298:intron | 25.0% |
| ! | CATATATACTTGTATAGCAT+AGG | + | chr5.4:8494598-8494617 | None:intergenic | 25.0% |
| ! | TGGATACACAACTTAATTAA+GGG | - | chr5.4:8491788-8491807 | MS.gene015298:intron | 25.0% |
| ! | TTGAAAATACTAATCTGTCT+TGG | - | chr5.4:8494538-8494557 | MS.gene015298:intron | 25.0% |
| ! | TTGGATACACAACTTAATTA+AGG | - | chr5.4:8491787-8491806 | MS.gene015298:intron | 25.0% |
| ! | TTTCTTTCATCAGAAAATGA+AGG | - | chr5.4:8495520-8495539 | MS.gene015298:CDS | 25.0% |
| !! | AAAACTTTTCCTACAAACAA+AGG | + | chr5.4:8494383-8494402 | None:intergenic | 25.0% |
| !! | ACAATGTTGTAATTTTCTCT+AGG | - | chr5.4:8494688-8494707 | MS.gene015298:intron | 25.0% |
| !! | CTAACACTCACTATTTTATT+AGG | + | chr5.4:8492187-8492206 | None:intergenic | 25.0% |
| !! | CTATGGATTATCTATACATT+TGG | - | chr5.4:8494653-8494672 | MS.gene015298:intron | 25.0% |
| !! | GCTTGATAGTTTATAAAAAG+AGG | - | chr5.4:8492050-8492069 | MS.gene015298:intron | 25.0% |
| !!! | AAAATACTGCAGTTTTTTCA+AGG | + | chr5.4:8493572-8493591 | None:intergenic | 25.0% |
| !!! | AAATACTGCAGTTTTTTCAA+GGG | + | chr5.4:8493571-8493590 | None:intergenic | 25.0% |
| !!! | AAATGCTTTGAATTTTGTAG+AGG | - | chr5.4:8494445-8494464 | MS.gene015298:intron | 25.0% |
| !!! | AATCTTTTAAAACTATGGCA+GGG | + | chr5.4:8495165-8495184 | None:intergenic | 25.0% |
| !!! | ATTTGATTATTTTAGCTTCG+AGG | + | chr5.4:8492295-8492314 | None:intergenic | 25.0% |
| !!! | CAACATGCATTTTTGTTTTA+GGG | + | chr5.4:8492327-8492346 | None:intergenic | 25.0% |
| !!! | CTTTTTTGAAATTTCGTTCT+TGG | - | chr5.4:8494917-8494936 | MS.gene015298:intron | 25.0% |
| !!! | GCTTTAATTTTTCTATATGC+AGG | - | chr5.4:8494489-8494508 | MS.gene015298:intron | 25.0% |
| !!! | TCAACATGCATTTTTGTTTT+AGG | + | chr5.4:8492328-8492347 | None:intergenic | 25.0% |
| !!! | TGTTGACTTAAATTATATGG+TGG | - | chr5.4:8494311-8494330 | MS.gene015298:intron | 25.0% |
| !!! | TTTGATTATTTTAGCTTCGA+GGG | + | chr5.4:8492294-8492313 | None:intergenic | 25.0% |
| AAAATACTAATCTGTCTTGG+TGG | - | chr5.4:8494541-8494560 | MS.gene015298:intron | 30.0% | |
| AAAATTCAGGCTGAAGTTAT+GGG | - | chr5.4:8493891-8493910 | MS.gene015298:CDS | 30.0% | |
| AATAGAGGATCAATAGACAT+GGG | - | chr5.4:8493368-8493387 | MS.gene015298:intron | 30.0% | |
| AATTCACCCCAATAAAAAAG+TGG | + | chr5.4:8492100-8492119 | None:intergenic | 30.0% | |
| ACTTCATTTATTCTCCTTGT+TGG | - | chr5.4:8493864-8493883 | MS.gene015298:intron | 30.0% | |
| ACTTTGTCATTGAATCTTTC+TGG | - | chr5.4:8491587-8491606 | MS.gene015298:intron | 30.0% | |
| ATACCTCTCATAATCACTTA+GGG | + | chr5.4:8495352-8495371 | None:intergenic | 30.0% | |
| ATATGATTCCTTCATTGCTA+TGG | - | chr5.4:8494636-8494655 | MS.gene015298:intron | 30.0% | |
| ATCTTCATCAACATAGAAAG+AGG | + | chr5.4:8491359-8491378 | None:intergenic | 30.0% | |
| ATTCACCCCAATAAAAAAGT+GGG | + | chr5.4:8492099-8492118 | None:intergenic | 30.0% | |
| CGTGAATTTGCATATGAATT+TGG | + | chr5.4:8491084-8491103 | None:intergenic | 30.0% | |
| CTTTGTCATTGAATCTTTCT+GGG | - | chr5.4:8491588-8491607 | MS.gene015298:intron | 30.0% | |
| GATACTATTAACGTAATGAC+AGG | - | chr5.4:8493493-8493512 | MS.gene015298:intron | 30.0% | |
| GATCTCTTCAATATTAATGC+TGG | - | chr5.4:8492538-8492557 | MS.gene015298:intron | 30.0% | |
| GATGAGTAATGATTGAACAT+TGG | + | chr5.4:8494241-8494260 | None:intergenic | 30.0% | |
| GTTATGTAGATGAATGAACA+TGG | - | chr5.4:8491239-8491258 | MS.gene015298:intron | 30.0% | |
| TAAAATTCAGGCTGAAGTTA+TGG | - | chr5.4:8493890-8493909 | MS.gene015298:CDS | 30.0% | |
| TAAGTGTAGCATAAAAAGCT+GGG | + | chr5.4:8492775-8492794 | None:intergenic | 30.0% | |
| TACAATATCAGTTCAGAAGT+TGG | - | chr5.4:8493621-8493640 | MS.gene015298:intron | 30.0% | |
| TAGATAATCCATAGCAATGA+AGG | + | chr5.4:8494647-8494666 | None:intergenic | 30.0% | |
| TATTAACGTAATGACAGGAA+GGG | - | chr5.4:8493498-8493517 | MS.gene015298:intron | 30.0% | |
| TCAAGTACTCAATTTCCTTT+GGG | + | chr5.4:8494118-8494137 | None:intergenic | 30.0% | |
| TCATGACTTCTTAACAATGT+TGG | - | chr5.4:8494961-8494980 | MS.gene015298:intron | 30.0% | |
| TGAGAGCCTATACTTATTAA+TGG | - | chr5.4:8494782-8494801 | MS.gene015298:intron | 30.0% | |
| TGCAGACCTAAAATCAAATA+TGG | + | chr5.4:8494029-8494048 | None:intergenic | 30.0% | |
| TGCTATAAGTTCTGTAATTC+TGG | + | chr5.4:8491949-8491968 | None:intergenic | 30.0% | |
| TGTTCTTTACCTATCAACTA+TGG | - | chr5.4:8494261-8494280 | MS.gene015298:intron | 30.0% | |
| TTACATTGTAAGGTTCTGTT+TGG | - | chr5.4:8491768-8491787 | MS.gene015298:intron | 30.0% | |
| TTTATAGACCCCTAATACTA+AGG | - | chr5.4:8493334-8493353 | MS.gene015298:intron | 30.0% | |
| ! | ATAACTTCAGCCTGAATTTT+AGG | + | chr5.4:8493891-8493910 | None:intergenic | 30.0% |
| ! | TGAAGAGCAATAGTTTCTTT+TGG | - | chr5.4:8493231-8493250 | MS.gene015298:intron | 30.0% |
| ! | TTAAATCTTTGGGCAAGTTT+TGG | - | chr5.4:8492932-8492951 | MS.gene015298:intron | 30.0% |
| !! | AGTGTCATTGTTGATTCAAT+TGG | + | chr5.4:8491188-8491207 | None:intergenic | 30.0% |
| !!! | CTAACACCCACTTTTTTATT+GGG | - | chr5.4:8492090-8492109 | MS.gene015298:intron | 30.0% |
| !!! | GAATCTTTTAAAACTATGGC+AGG | + | chr5.4:8495166-8495185 | None:intergenic | 30.0% |
| !!! | TAACACCCACTTTTTTATTG+GGG | - | chr5.4:8492091-8492110 | MS.gene015298:intron | 30.0% |
| !!! | TCTAACACCCACTTTTTTAT+TGG | - | chr5.4:8492089-8492108 | MS.gene015298:intron | 30.0% |
| AAAATCGCAACTTTGAATCC+TGG | + | chr5.4:8491311-8491330 | None:intergenic | 35.0% | |
| AACCATGTCCTTAGTATTAG+GGG | + | chr5.4:8493345-8493364 | None:intergenic | 35.0% | |
| AACGAATCACTACACGTATA+TGG | + | chr5.4:8491541-8491560 | None:intergenic | 35.0% | |
| AAGAGGTAAAATCGTGATTC+CGG | + | chr5.4:8493961-8493980 | None:intergenic | 35.0% | |
| AAGGAGGGAATAATGGTAAA+AGG | - | chr5.4:8493392-8493411 | MS.gene015298:intron | 35.0% | |
| AAGTGAGCATATTTGTGAGA+AGG | - | chr5.4:8493021-8493040 | MS.gene015298:intron | 35.0% | |
| ACGAATCACTACACGTATAT+GGG | + | chr5.4:8491540-8491559 | None:intergenic | 35.0% | |
| ACTAAATTGCTTACGTGCTT+AGG | - | chr5.4:8493102-8493121 | MS.gene015298:intron | 35.0% | |
| AGATGAAGAACAGAAACCAA+TGG | + | chr5.4:8491386-8491405 | None:intergenic | 35.0% | |
| AGGAGGGAATAATGGTAAAA+GGG | - | chr5.4:8493393-8493412 | MS.gene015298:intron | 35.0% | |
| ATAAAATGGTGAAACCCACA+TGG | + | chr5.4:8492123-8492142 | None:intergenic | 35.0% | |
| ATATTTCAACAGGGCAAGTT+TGG | - | chr5.4:8495455-8495474 | MS.gene015298:intron | 35.0% | |
| ATCAAGTTTACAATCGCCTT+AGG | + | chr5.4:8492604-8492623 | None:intergenic | 35.0% | |
| ATGTAGATGAATGAACATGG+TGG | - | chr5.4:8491242-8491261 | MS.gene015298:intron | 35.0% | |
| CAACCATGTCCTTAGTATTA+GGG | + | chr5.4:8493346-8493365 | None:intergenic | 35.0% | |
| CAAGTACTCAATTTCCTTTG+GGG | + | chr5.4:8494117-8494136 | None:intergenic | 35.0% | |
| CATACATACCACAAACGTAT+TGG | + | chr5.4:8492737-8492756 | None:intergenic | 35.0% | |
| CATACCTCTCATAATCACTT+AGG | + | chr5.4:8495353-8495372 | None:intergenic | 35.0% | |
| CGAAGATTAAATCATCCCAT+TGG | - | chr5.4:8493138-8493157 | MS.gene015298:intron | 35.0% | |
| CTAATACTAAGGACATGGTT+GGG | - | chr5.4:8493345-8493364 | MS.gene015298:intron | 35.0% | |
| CTATTAACGTAATGACAGGA+AGG | - | chr5.4:8493497-8493516 | MS.gene015298:intron | 35.0% | |
| GAAAAACGTACCTTGAGATT+GGG | + | chr5.4:8491138-8491157 | None:intergenic | 35.0% | |
| GAATAGAGGATCAATAGACA+TGG | - | chr5.4:8493367-8493386 | MS.gene015298:intron | 35.0% | |
| GCTACACTTACATCATAACT+AGG | - | chr5.4:8492785-8492804 | MS.gene015298:intron | 35.0% | |
| GCTTGCATGGGAAAAAATTT+AGG | - | chr5.4:8494467-8494486 | MS.gene015298:intron | 35.0% | |
| GGTTTAACCTGAAATTTGAG+TGG | + | chr5.4:8494080-8494099 | None:intergenic | 35.0% | |
| GTAAGTGTAGCATAAAAAGC+TGG | + | chr5.4:8492776-8492795 | None:intergenic | 35.0% | |
| GTATCTGTGCTTACATTGTA+AGG | - | chr5.4:8491758-8491777 | MS.gene015298:intron | 35.0% | |
| GTCAAGTACTCAATTTCCTT+TGG | + | chr5.4:8494119-8494138 | None:intergenic | 35.0% | |
| GTGATTCGTTGTCATGAATT+TGG | - | chr5.4:8491551-8491570 | MS.gene015298:CDS | 35.0% | |
| TACCTCTCATAATCACTTAG+GGG | + | chr5.4:8495351-8495370 | None:intergenic | 35.0% | |
| TACTTCTGATATCAGTCACA+TGG | - | chr5.4:8491433-8491452 | MS.gene015298:intron | 35.0% | |
| TATGATGTCGTTAATACTCC+TGG | - | chr5.4:8491407-8491426 | MS.gene015298:intron | 35.0% | |
| TCAACTGTTTCATAAAGTGC+AGG | - | chr5.4:8495001-8495020 | MS.gene015298:intron | 35.0% | |
| TCACATATTGTATCGTAGTG+TGG | - | chr5.4:8493810-8493829 | MS.gene015298:intron | 35.0% | |
| TCTTTACCTATCAACTATGG+CGG | - | chr5.4:8494264-8494283 | MS.gene015298:intron | 35.0% | |
| TGAAAAACGTACCTTGAGAT+TGG | + | chr5.4:8491139-8491158 | None:intergenic | 35.0% | |
| TGACAGATCGCATACAAAAT+GGG | - | chr5.4:8494135-8494154 | MS.gene015298:CDS | 35.0% | |
| TGATTCAATTGGTTGCGTAA+TGG | + | chr5.4:8491177-8491196 | None:intergenic | 35.0% | |
| TGCATGTTGAACAATAGAGA+AGG | - | chr5.4:8492338-8492357 | MS.gene015298:intron | 35.0% | |
| TTAAAACTATGGCAGGGAAT+AGG | + | chr5.4:8495159-8495178 | None:intergenic | 35.0% | |
| TTGAACAATAGAGAAGGTCT+AGG | - | chr5.4:8492344-8492363 | MS.gene015298:intron | 35.0% | |
| TTGACAGATCGCATACAAAA+TGG | - | chr5.4:8494134-8494153 | MS.gene015298:CDS | 35.0% | |
| ! | AATTTTGTAGAGGCTTGCAT+GGG | - | chr5.4:8494455-8494474 | MS.gene015298:intron | 35.0% |
| ! | ACTTTTCCTACAAACAAAGG+AGG | + | chr5.4:8494380-8494399 | None:intergenic | 35.0% |
| ! | AGGATCTAAGACATCCTTTA+TGG | + | chr5.4:8495139-8495158 | None:intergenic | 35.0% |
| ! | AGGATTCAAAGTTGCGATTT+TGG | - | chr5.4:8491310-8491329 | MS.gene015298:CDS | 35.0% |
| ! | ATTTGGTAATCATTCCTGCT+GGG | - | chr5.4:8492485-8492504 | MS.gene015298:CDS | 35.0% |
| ! | CGTACTTTTGATGCAAAGAA+TGG | + | chr5.4:8495288-8495307 | None:intergenic | 35.0% |
| ! | GATTTTACCTCTTCTTTCTC+AGG | - | chr5.4:8493968-8493987 | MS.gene015298:CDS | 35.0% |
| ! | GGATTCAAAGTTGCGATTTT+GGG | - | chr5.4:8491311-8491330 | MS.gene015298:CDS | 35.0% |
| ! | GTAATCATATGTGTCGTTGT+TGG | - | chr5.4:8491699-8491718 | MS.gene015298:intron | 35.0% |
| ! | GTTGATGAAGATGAATCCAT+TGG | - | chr5.4:8491367-8491386 | MS.gene015298:intron | 35.0% |
| ! | TGACATGACTAAGACGATTT+TGG | - | chr5.4:8492403-8492422 | MS.gene015298:intron | 35.0% |
| ! | TTCTATGACATTGCTTGTTG+AGG | - | chr5.4:8493744-8493763 | MS.gene015298:intron | 35.0% |
| ! | TTTGCATCAAAAGTACGACT+TGG | - | chr5.4:8495291-8495310 | MS.gene015298:CDS | 35.0% |
| !! | AAGTGAAAGCGTTATCCAAT+GGG | + | chr5.4:8493156-8493175 | None:intergenic | 35.0% |
| !! | ATGTGCATATGTTGATTCAC+AGG | - | chr5.4:8495091-8495110 | MS.gene015298:intron | 35.0% |
| !!! | CTAAGACGATTTTGGTGTTT+AGG | - | chr5.4:8492411-8492430 | MS.gene015298:intron | 35.0% |
| !!! | TTTTTGTTTTAGGGCCTGTT+TGG | + | chr5.4:8492318-8492337 | None:intergenic | 35.0% |
| AAAGCTGGGCAGAAATTAGT+AGG | + | chr5.4:8492761-8492780 | None:intergenic | 40.0% | |
| AAGCAAAAGGAAGTTCGCAT+CGG | + | chr5.4:8492850-8492869 | None:intergenic | 40.0% | |
| AAGCATTCAAGCTTCGACTT+TGG | + | chr5.4:8495211-8495230 | None:intergenic | 40.0% | |
| AAGTTATGGGTCTTGATCCA+AGG | - | chr5.4:8493904-8493923 | MS.gene015298:CDS | 40.0% | |
| ACAGATCGCATACAAAATGG+GGG | - | chr5.4:8494137-8494156 | MS.gene015298:CDS | 40.0% | |
| AGACATCCTTTATGGAAAGC+AGG | + | chr5.4:8495131-8495150 | None:intergenic | 40.0% | |
| AGATCATCTCTTGTCATTCC+AGG | + | chr5.4:8492523-8492542 | None:intergenic | 40.0% | |
| AGATGATTAGATGGACGCAA+CGG | + | chr5.4:8493707-8493726 | None:intergenic | 40.0% | |
| AGCATTCAAGCTTCGACTTT+GGG | + | chr5.4:8495210-8495229 | None:intergenic | 40.0% | |
| AGGATCAATAGACATGGGTA+AGG | - | chr5.4:8493373-8493392 | MS.gene015298:intron | 40.0% | |
| AGTTATGGGTCTTGATCCAA+GGG | - | chr5.4:8493905-8493924 | MS.gene015298:CDS | 40.0% | |
| ATAGGAACAGTGGAGTTAAC+TGG | + | chr5.4:8492634-8492653 | None:intergenic | 40.0% | |
| ATCAATAGACATGGGTAAGG+AGG | - | chr5.4:8493376-8493395 | MS.gene015298:intron | 40.0% | |
| ATGTAAGCACAGATACTCCT+CGG | + | chr5.4:8491754-8491773 | None:intergenic | 40.0% | |
| ATTGCTTACGTGCTTAGGTA+TGG | - | chr5.4:8493107-8493126 | MS.gene015298:intron | 40.0% | |
| CAAAGTCCTGCTTTCCATAA+AGG | - | chr5.4:8495122-8495141 | MS.gene015298:intron | 40.0% | |
| CAGTTCAGAAGTTGGAATTC+TGG | - | chr5.4:8493629-8493648 | MS.gene015298:intron | 40.0% | |
| CCAACCATGTCCTTAGTATT+AGG | + | chr5.4:8493347-8493366 | None:intergenic | 40.0% | |
| CCTAATACTAAGGACATGGT+TGG | - | chr5.4:8493344-8493363 | MS.gene015298:intron | 40.0% | |
| CCTTGTTGGACCTAAAATTC+AGG | - | chr5.4:8493878-8493897 | MS.gene015298:CDS | 40.0% | |
| CGGTGATAGAAACTGGAATT+AGG | + | chr5.4:8493687-8493706 | None:intergenic | 40.0% | |
| CTCTTGTCATTCCAGGTTTA+CGG | + | chr5.4:8492516-8492535 | None:intergenic | 40.0% | |
| CTGATATCAGAAGTAACACC+AGG | + | chr5.4:8491428-8491447 | None:intergenic | 40.0% | |
| CTGATCATGCTTGAAGCAAA+AGG | + | chr5.4:8492863-8492882 | None:intergenic | 40.0% | |
| GAAATCGGTCGCACATAAAA+TGG | + | chr5.4:8492137-8492156 | None:intergenic | 40.0% | |
| GAAATTCCTCAACTCCGTTA+CGG | + | chr5.4:8495317-8495336 | None:intergenic | 40.0% | |
| GACAGATCGCATACAAAATG+GGG | - | chr5.4:8494136-8494155 | MS.gene015298:CDS | 40.0% | |
| GAGGCTAATTGAATGTGAGT+TGG | - | chr5.4:8494412-8494431 | MS.gene015298:intron | 40.0% | |
| GGAGGGAATAATGGTAAAAG+GGG | - | chr5.4:8493394-8493413 | MS.gene015298:intron | 40.0% | |
| GTTGAGGAATTTCTTCCTCT+TGG | - | chr5.4:8495324-8495343 | MS.gene015298:CDS | 40.0% | |
| TAACTCCACTGTTCCTATTG+CGG | - | chr5.4:8492636-8492655 | MS.gene015298:CDS | 40.0% | |
| TATGATCCCAAGAGACTGTT+GGG | - | chr5.4:8492685-8492704 | MS.gene015298:CDS | 40.0% | |
| TATTGGGGTGAATTCCATGT+GGG | - | chr5.4:8492106-8492125 | MS.gene015298:intron | 40.0% | |
| TCAATAGACATGGGTAAGGA+GGG | - | chr5.4:8493377-8493396 | MS.gene015298:intron | 40.0% | |
| TCTGTCTTGGTGGAATGTAT+CGG | - | chr5.4:8494551-8494570 | MS.gene015298:intron | 40.0% | |
| TCTTGTCATTCCAGGTTTAC+GGG | + | chr5.4:8492515-8492534 | None:intergenic | 40.0% | |
| TGCACTTACAGGTATGGATT+TGG | - | chr5.4:8492468-8492487 | MS.gene015298:CDS | 40.0% | |
| TGGATCTGCAACACTATCAA+TGG | - | chr5.4:8494724-8494743 | MS.gene015298:intron | 40.0% | |
| TGTAATTCTGGCACTACTGA+TGG | + | chr5.4:8491937-8491956 | None:intergenic | 40.0% | |
| TGTTCAACGACAACTGTTAG+TGG | + | chr5.4:8495379-8495398 | None:intergenic | 40.0% | |
| TTAAGACCGCCATAGTTGAT+AGG | + | chr5.4:8494273-8494292 | None:intergenic | 40.0% | |
| TTATGATCCCAAGAGACTGT+TGG | - | chr5.4:8492684-8492703 | MS.gene015298:CDS | 40.0% | |
| TTATTGGGGTGAATTCCATG+TGG | - | chr5.4:8492105-8492124 | MS.gene015298:intron | 40.0% | |
| ! | AATTTTCTCTAGGCCAAAGC+TGG | - | chr5.4:8494698-8494717 | MS.gene015298:intron | 40.0% |
| ! | AGAAACTGGGTTGGAAAGAA+TGG | - | chr5.4:8493532-8493551 | MS.gene015298:intron | 40.0% |
| ! | GAAACTGGGTTGGAAAGAAT+GGG | - | chr5.4:8493533-8493552 | MS.gene015298:intron | 40.0% |
| ! | GAATTTTGTAGAGGCTTGCA+TGG | - | chr5.4:8494454-8494473 | MS.gene015298:intron | 40.0% |
| ! | GATTTGGTAATCATTCCTGC+TGG | - | chr5.4:8492484-8492503 | MS.gene015298:CDS | 40.0% |
| ! | GCTTGTTGCTAACTCTTTCT+TGG | + | chr5.4:8495487-8495506 | None:intergenic | 40.0% |
| ! | GTTTAGGTTCGAGGATTCTT+GGG | - | chr5.4:8492427-8492446 | MS.gene015298:intron | 40.0% |
| ! | TGTTTAGGTTCGAGGATTCT+TGG | - | chr5.4:8492426-8492445 | MS.gene015298:intron | 40.0% |
| ! | TTTAGGTTCGAGGATTCTTG+GGG | - | chr5.4:8492428-8492447 | MS.gene015298:intron | 40.0% |
| ! | TTTGGTAATCATTCCTGCTG+GGG | - | chr5.4:8492486-8492505 | MS.gene015298:CDS | 40.0% |
| !! | AATTTCCTTTGGGGTGAAAG+AGG | + | chr5.4:8494108-8494127 | None:intergenic | 40.0% |
| !! | CAAGTGAAAGCGTTATCCAA+TGG | + | chr5.4:8493157-8493176 | None:intergenic | 40.0% |
| !! | CCTGAATTTTAGGTCCAACA+AGG | + | chr5.4:8493881-8493900 | None:intergenic | 40.0% |
| !! | GCATATGTTGATTCACAGGT+AGG | - | chr5.4:8495095-8495114 | MS.gene015298:intron | 40.0% |
| !!! | GAAAAGTTTTGAGACTCGAG+AGG | - | chr5.4:8494393-8494412 | MS.gene015298:intron | 40.0% |
| !!! | GATTTTGGTGTTTAGGTTCG+AGG | - | chr5.4:8492418-8492437 | MS.gene015298:intron | 40.0% |
| AAACGTACCTTGAGATTGGG+AGG | + | chr5.4:8491135-8491154 | None:intergenic | 45.0% | |
| AAGGACATGGTTGGGAATAG+AGG | - | chr5.4:8493353-8493372 | MS.gene015298:intron | 45.0% | |
| AATGTTCATTGCCGTGCCAA+AGG | - | chr5.4:8491278-8491297 | MS.gene015298:CDS | 45.0% | |
| ACCTCTGCCACTCAAATTTC+AGG | - | chr5.4:8494070-8494089 | MS.gene015298:CDS | 45.0% | |
| ACCTGAAATTTGAGTGGCAG+AGG | + | chr5.4:8494074-8494093 | None:intergenic | 45.0% | |
| AGCTTAGAACAATGCTGAGC+TGG | - | chr5.4:8493431-8493450 | MS.gene015298:intron | 45.0% | |
| ATGGTCGTATAACCACACGT+TGG | - | chr5.4:8493062-8493081 | MS.gene015298:intron | 45.0% | |
| ATGTGGATGTTCCAGTTGTC+GGG | - | chr5.4:8493928-8493947 | MS.gene015298:CDS | 45.0% | |
| ATGTTCATTGCCGTGCCAAA+GGG | - | chr5.4:8491279-8491298 | MS.gene015298:CDS | 45.0% | |
| ATTCTGGCACTACTGATGGA+AGG | + | chr5.4:8491933-8491952 | None:intergenic | 45.0% | |
| CAACAGGGCAAGTTTGGAAA+AGG | - | chr5.4:8495461-8495480 | MS.gene015298:intron | 45.0% | |
| CAATCTTGATCACCAACGTG+TGG | + | chr5.4:8493077-8493096 | None:intergenic | 45.0% | |
| CATGGGTAAGGAGGGAATAA+TGG | - | chr5.4:8493385-8493404 | MS.gene015298:intron | 45.0% | |
| CTACACACAGAGAGTGGTAT+CGG | - | chr5.4:8493186-8493205 | MS.gene015298:intron | 45.0% | |
| CTTGTCATTCCAGGTTTACG+GGG | + | chr5.4:8492514-8492533 | None:intergenic | 45.0% | |
| GAAAGAGTTAGCAACAAGCG+TGG | - | chr5.4:8495488-8495507 | MS.gene015298:CDS | 45.0% | |
| GACAATGCTTGACGTGGTTA+GGG | - | chr5.4:8492711-8492730 | MS.gene015298:intron | 45.0% | |
| GACCCCTAATACTAAGGACA+TGG | - | chr5.4:8493340-8493359 | MS.gene015298:intron | 45.0% | |
| GATGTGGATGTTCCAGTTGT+CGG | - | chr5.4:8493927-8493946 | MS.gene015298:CDS | 45.0% | |
| GATTGCAAAGCGATGTCCTA+AGG | - | chr5.4:8492585-8492604 | MS.gene015298:intron | 45.0% | |
| GCATGTCTTCGTGCGTTAAA+AGG | - | chr5.4:8495050-8495069 | MS.gene015298:intron | 45.0% | |
| GGACTAACAAAGTCTGTCGT+AGG | - | chr5.4:8495251-8495270 | MS.gene015298:CDS | 45.0% | |
| GTCCCCTAAGTGATTATGAG+AGG | - | chr5.4:8495346-8495365 | MS.gene015298:CDS | 45.0% | |
| TAATCACTTAGGGGACCAAG+AGG | + | chr5.4:8495342-8495361 | None:intergenic | 45.0% | |
| TACACACAGAGAGTGGTATC+GGG | - | chr5.4:8493187-8493206 | MS.gene015298:intron | 45.0% | |
| TATCGGACACGACATAGACA+CGG | - | chr5.4:8491640-8491659 | MS.gene015298:intron | 45.0% | |
| TGACAATGCTTGACGTGGTT+AGG | - | chr5.4:8492710-8492729 | MS.gene015298:intron | 45.0% | |
| TGAGGATGCACTTACAGGTA+TGG | - | chr5.4:8492462-8492481 | MS.gene015298:CDS | 45.0% | |
| TTAGCAACAAGCGTGGAGAA+GGG | - | chr5.4:8495495-8495514 | MS.gene015298:CDS | 45.0% | |
| TTGAAAACCTCAGCCGCAAT+AGG | + | chr5.4:8492652-8492671 | None:intergenic | 45.0% | |
| ! | AAAGTACGACTTGGCCGTAA+CGG | - | chr5.4:8495300-8495319 | MS.gene015298:CDS | 45.0% |
| ! | ATATGTGCCACTGTTGTGTC+TGG | - | chr5.4:8491904-8491923 | MS.gene015298:intron | 45.0% |
| ! | GCTGAGGTTTTCAAAAGAGC+TGG | - | chr5.4:8492658-8492677 | MS.gene015298:CDS | 45.0% |
| ! | GTGTCCCACACTTTGGAAAT+CGG | + | chr5.4:8492152-8492171 | None:intergenic | 45.0% |
| ! | TCCTCGGATTAGGAGTGTAA+CGG | + | chr5.4:8491738-8491757 | None:intergenic | 45.0% |
| ! | TGCACTCCTCCTTTGTTTGT+AGG | - | chr5.4:8494371-8494390 | MS.gene015298:intron | 45.0% |
| !! | CACACGTTGGTGATCAAGAT+TGG | - | chr5.4:8493075-8493094 | MS.gene015298:intron | 45.0% |
| AAGGACACCAGACACAACAG+TGG | + | chr5.4:8491914-8491933 | None:intergenic | 50.0% | |
| ACCTTCCTCTTTCACCCCAA+AGG | - | chr5.4:8494100-8494119 | MS.gene015298:CDS | 50.0% | |
| ACGTAATGACAGGAAGGGTG+AGG | - | chr5.4:8493503-8493522 | MS.gene015298:intron | 50.0% | |
| ACTGGAACATCCACATCCCT+TGG | + | chr5.4:8493924-8493943 | None:intergenic | 50.0% | |
| AGAACAATGCTGAGCTGGCA+AGG | - | chr5.4:8493436-8493455 | MS.gene015298:intron | 50.0% | |
| CAGCTTGAGGATGCACTTAC+AGG | - | chr5.4:8492457-8492476 | MS.gene015298:CDS | 50.0% | |
| CCTCAATCCTCCCAATCTCA+AGG | - | chr5.4:8491125-8491144 | MS.gene015298:CDS | 50.0% | |
| CCTTGAGATTGGGAGGATTG+AGG | + | chr5.4:8491128-8491147 | None:intergenic | 50.0% | |
| CTTGGGGCAAAATCAGCTTG+AGG | - | chr5.4:8492444-8492463 | MS.gene015298:CDS | 50.0% | |
| GACGCAACGGTGATAGAAAC+TGG | + | chr5.4:8493694-8493713 | None:intergenic | 50.0% | |
| GCACAGATACTCCTCGGATT+AGG | + | chr5.4:8491748-8491767 | None:intergenic | 50.0% | |
| GGTTAGGGCCAATACGTTTG+TGG | - | chr5.4:8492726-8492745 | MS.gene015298:intron | 50.0% | |
| GTATCGTGAGCTAAGCGTCA+TGG | - | chr5.4:8493043-8493062 | MS.gene015298:intron | 50.0% | |
| GTCACTCCCAACAGTCTCTT+GGG | + | chr5.4:8492694-8492713 | None:intergenic | 50.0% | |
| GTGCAGACCTGAGAAAGAAG+AGG | + | chr5.4:8493978-8493997 | None:intergenic | 50.0% | |
| GTTAGCAACAAGCGTGGAGA+AGG | - | chr5.4:8495494-8495513 | MS.gene015298:CDS | 50.0% | |
| TCCGTTACACTCCTAATCCG+AGG | - | chr5.4:8491734-8491753 | MS.gene015298:intron | 50.0% | |
| TGAGATTGGGAGGATTGAGG+TGG | + | chr5.4:8491125-8491144 | None:intergenic | 50.0% | |
| TGGGGGAACAGAAGTTGTTG+AGG | - | chr5.4:8494154-8494173 | MS.gene015298:CDS | 50.0% | |
| TGTCACTCCCAACAGTCTCT+TGG | + | chr5.4:8492695-8492714 | None:intergenic | 50.0% | |
| TGTGGATGTTCCAGTTGTCG+GGG | - | chr5.4:8493929-8493948 | MS.gene015298:CDS | 50.0% | |
| TGTTCATTGCCGTGCCAAAG+GGG | - | chr5.4:8491280-8491299 | MS.gene015298:CDS | 50.0% | |
| ! | CACTTGCTACACACAGAGAG+TGG | - | chr5.4:8493180-8493199 | MS.gene015298:intron | 50.0% |
| ! | CGTGCTTAGGTATGGTTCTG+TGG | - | chr5.4:8493115-8493134 | MS.gene015298:intron | 50.0% |
| ! | GCGACCGATTTCCAAAGTGT+GGG | - | chr5.4:8492145-8492164 | MS.gene015298:intron | 50.0% |
| ! | TGCGACCGATTTCCAAAGTG+TGG | - | chr5.4:8492144-8492163 | MS.gene015298:intron | 50.0% |
| ! | TTTGGGGTGAAAGAGGAAGG+TGG | + | chr5.4:8494101-8494120 | None:intergenic | 50.0% |
| !! | TCCTTTGGGGTGAAAGAGGA+AGG | + | chr5.4:8494104-8494123 | None:intergenic | 50.0% |
| AATGACAGGAAGGGTGAGGC+TGG | - | chr5.4:8493507-8493526 | MS.gene015298:intron | 55.0% | |
| AGCAGAGAGGCTGGAGTAGT+AGG | - | chr5.4:8494342-8494361 | MS.gene015298:intron | 55.0% | |
| AGCTGGCAAGGAGTTGTGGA+TGG | - | chr5.4:8493448-8493467 | MS.gene015298:intron | 55.0% | |
| ATGACAGGAAGGGTGAGGCT+GGG | - | chr5.4:8493508-8493527 | MS.gene015298:intron | 55.0% | |
| ATTGGGAGGATTGAGGTGGC+TGG | + | chr5.4:8491121-8491140 | None:intergenic | 55.0% | |
| CACTGTTCCTATTGCGGCTG+AGG | - | chr5.4:8492642-8492661 | MS.gene015298:CDS | 55.0% | |
| CTCAGCCGCAATAGGAACAG+TGG | + | chr5.4:8492644-8492663 | None:intergenic | 55.0% | |
| GAATCCTGGTGATCCCCCTT+TGG | + | chr5.4:8491297-8491316 | None:intergenic | 55.0% | |
| GGGAGTGACAATGCTTGACG+TGG | - | chr5.4:8492705-8492724 | MS.gene015298:intron | 55.0% | |
| GGGTCTTGATCCAAGGGATG+TGG | - | chr5.4:8493911-8493930 | MS.gene015298:CDS | 55.0% | |
| GTGGATGTTCCAGTTGTCGG+GGG | - | chr5.4:8493930-8493949 | MS.gene015298:CDS | 55.0% | |
| GTTCATTGCCGTGCCAAAGG+GGG | - | chr5.4:8491281-8491300 | MS.gene015298:CDS | 55.0% | |
| TCAAGGCGTGTCCCACACTT+TGG | + | chr5.4:8492159-8492178 | None:intergenic | 55.0% | |
| TGCAGATCCAGCTCCAGCTT+TGG | + | chr5.4:8494714-8494733 | None:intergenic | 55.0% | |
| ! | ACTTGGCCGTAACGGAGTTG+AGG | - | chr5.4:8495308-8495327 | MS.gene015298:CDS | 55.0% |
| !! | GTTGCGATTTTGGGTGCTGC+TGG | - | chr5.4:8491320-8491339 | MS.gene015298:CDS | 55.0% |
| AGGCTGGGCAGAAACTGGGT+TGG | - | chr5.4:8493523-8493542 | MS.gene015298:intron | 60.0% | |
| CTCTAGGCCAAAGCTGGAGC+TGG | - | chr5.4:8494704-8494723 | MS.gene015298:intron | 60.0% | |
| CTGGTGATCCCCCTTTGGCA+CGG | + | chr5.4:8491292-8491311 | None:intergenic | 60.0% | |
| GCTGAGCTGGCAAGGAGTTG+TGG | - | chr5.4:8493444-8493463 | MS.gene015298:intron | 60.0% | |
| GGTGAGGCTGGGCAGAAACT+GGG | - | chr5.4:8493519-8493538 | MS.gene015298:intron | 60.0% | |
| GGTGGTGAGAGACAGCAGAG+AGG | - | chr5.4:8494329-8494348 | MS.gene015298:intron | 60.0% | |
| GTGAGAGACAGCAGAGAGGC+TGG | - | chr5.4:8494333-8494352 | MS.gene015298:intron | 60.0% | |
| !! | TTGGGTGCTGCTGGTGGCAT+AGG | - | chr5.4:8491329-8491348 | MS.gene015298:intron | 60.0% |
| !!! | GCGATTTTGGGTGCTGCTGG+TGG | - | chr5.4:8491323-8491342 | MS.gene015298:intron | 60.0% |
| CCAGTTGTCGGGGGACATGC+CGG | - | chr5.4:8493939-8493958 | MS.gene015298:CDS | 65.0% | |
| CGTGCCAAAGGGGGATCACC+AGG | - | chr5.4:8491290-8491309 | MS.gene015298:CDS | 65.0% | |
| GCTGGGGTTCCCCGTAAACC+TGG | - | chr5.4:8492502-8492521 | MS.gene015298:CDS | 65.0% | |
| GGGTGAGGCTGGGCAGAAAC+TGG | - | chr5.4:8493518-8493537 | MS.gene015298:intron | 65.0% | |
| GGTTTACGGGGAACCCCAGC+AGG | + | chr5.4:8492502-8492521 | None:intergenic | 65.0% | |
| CCGGCATGTCCCCCGACAAC+TGG | + | chr5.4:8493942-8493961 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 8491075 | 8495539 | 8491075 | ID=MS.gene015298 |
| chr5.4 | mRNA | 8491075 | 8495539 | 8491075 | ID=MS.gene015298.t1;Parent=MS.gene015298 |
| chr5.4 | exon | 8495468 | 8495539 | 8495468 | ID=MS.gene015298.t1.exon1;Parent=MS.gene015298.t1 |
| chr5.4 | CDS | 8495468 | 8495539 | 8495468 | ID=cds.MS.gene015298.t1;Parent=MS.gene015298.t1 |
| chr5.4 | exon | 8495145 | 8495366 | 8495145 | ID=MS.gene015298.t1.exon2;Parent=MS.gene015298.t1 |
| chr5.4 | CDS | 8495145 | 8495366 | 8495145 | ID=cds.MS.gene015298.t1;Parent=MS.gene015298.t1 |
| chr5.4 | exon | 8493867 | 8494181 | 8493867 | ID=MS.gene015298.t1.exon3;Parent=MS.gene015298.t1 |
| chr5.4 | CDS | 8493867 | 8494181 | 8493867 | ID=cds.MS.gene015298.t1;Parent=MS.gene015298.t1 |
| chr5.4 | exon | 8492625 | 8492714 | 8492625 | ID=MS.gene015298.t1.exon4;Parent=MS.gene015298.t1 |
| chr5.4 | CDS | 8492625 | 8492714 | 8492625 | ID=cds.MS.gene015298.t1;Parent=MS.gene015298.t1 |
| chr5.4 | exon | 8492439 | 8492522 | 8492439 | ID=MS.gene015298.t1.exon5;Parent=MS.gene015298.t1 |
| chr5.4 | CDS | 8492439 | 8492522 | 8492439 | ID=cds.MS.gene015298.t1;Parent=MS.gene015298.t1 |
| chr5.4 | exon | 8491869 | 8491904 | 8491869 | ID=MS.gene015298.t1.exon6;Parent=MS.gene015298.t1 |
| chr5.4 | CDS | 8491869 | 8491904 | 8491869 | ID=cds.MS.gene015298.t1;Parent=MS.gene015298.t1 |
| chr5.4 | exon | 8491502 | 8491591 | 8491502 | ID=MS.gene015298.t1.exon7;Parent=MS.gene015298.t1 |
| chr5.4 | CDS | 8491502 | 8491591 | 8491502 | ID=cds.MS.gene015298.t1;Parent=MS.gene015298.t1 |
| chr5.4 | exon | 8491247 | 8491341 | 8491247 | ID=MS.gene015298.t1.exon8;Parent=MS.gene015298.t1 |
| chr5.4 | CDS | 8491247 | 8491341 | 8491247 | ID=cds.MS.gene015298.t1;Parent=MS.gene015298.t1 |
| chr5.4 | exon | 8491075 | 8491147 | 8491075 | ID=MS.gene015298.t1.exon9;Parent=MS.gene015298.t1 |
| chr5.4 | CDS | 8491075 | 8491147 | 8491075 | ID=cds.MS.gene015298.t1;Parent=MS.gene015298.t1 |
| Gene Sequence |
| Protein sequence |
