AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015375

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015375.t1 MTR_5g013420 97.245 1089 30 0 1 1089 1 1089 0.0 2182
MS.gene015375.t1 MTR_5g013420 97.153 1089 31 0 1 1089 1 1089 0.0 2179
MS.gene015375.t1 MTR_4g010830 69.131 1082 217 13 23 1089 1 980 0.0 1397
MS.gene015375.t1 MTR_4g010550 77.218 496 76 6 599 1089 1 464 0.0 756
MS.gene015375.t1 MTR_8g042750 40.172 580 312 13 532 1086 116 685 3.60e-125 399
MS.gene015375.t1 MTR_7g445710 42.804 535 217 10 576 1089 77 543 9.37e-125 393
MS.gene015375.t1 MTR_3g011440 40.926 540 298 13 567 1088 127 663 5.47e-122 389
MS.gene015375.t1 MTR_7g084090 42.553 517 262 13 603 1089 246 757 1.54e-117 380
MS.gene015375.t1 MTR_7g450730 41.935 527 210 10 570 1089 68 505 4.49e-116 368
MS.gene015375.t1 MTR_7g088370 39.771 523 281 16 580 1088 202 704 1.06e-115 374
MS.gene015375.t1 MTR_8g070070 41.612 459 249 7 617 1058 299 755 1.91e-113 370
MS.gene015375.t1 MTR_6g061270 41.618 519 267 12 603 1089 180 694 1.94e-113 368
MS.gene015375.t1 MTR_1g048950 41.187 539 259 11 576 1089 28 533 1.14e-111 358
MS.gene015375.t1 MTR_8g070075 40.781 461 254 7 615 1058 290 748 9.43e-111 362
MS.gene015375.t1 MTR_1g035420 39.321 501 281 11 581 1065 158 651 5.69e-110 357
MS.gene015375.t1 MTR_7g445530 41.584 505 206 10 576 1059 77 513 1.91e-109 351
MS.gene015375.t1 MTR_6g061200 40.964 498 251 10 611 1089 192 665 2.20e-108 353
MS.gene015375.t1 MTR_8g071030 40.611 458 253 7 618 1058 280 735 1.76e-105 348
MS.gene015375.t1 MTR_6g044690 38.889 468 248 12 615 1058 109 562 5.14e-93 308
MS.gene015375.t1 MTR_1g035400 37.984 516 276 18 581 1065 68 570 2.50e-89 299
MS.gene015375.t1 MTR_0376s0030 36.546 498 268 15 585 1058 87 560 8.00e-86 289
MS.gene015375.t1 MTR_7g084090 41.085 387 204 11 603 968 246 629 3.85e-77 268
MS.gene015375.t1 MTR_6g043960 34.510 510 268 14 584 1058 2 480 3.22e-76 260
MS.gene015375.t1 MTR_2g054460 33.135 504 261 13 581 1058 9 462 1.36e-68 238
MS.gene015375.t1 MTR_7g052480 42.814 334 162 10 774 1089 234 556 1.92e-67 237
MS.gene015375.t1 MTR_5g018850 34.848 330 151 10 801 1089 1201 1507 1.19e-43 174
MS.gene015375.t1 MTR_7g445600 52.055 146 33 1 914 1059 248 356 3.02e-42 159
MS.gene015375.t1 MTR_7g445600 40.606 165 81 3 576 740 73 220 3.92e-29 120
MS.gene015375.t1 MTR_8g078490 40.271 221 103 7 875 1089 1056 1253 3.36e-41 165
MS.gene015375.t1 MTR_4g132610 38.182 220 107 5 876 1089 851 1047 3.87e-37 152
MS.gene015375.t1 MTR_8g078505 33.987 306 146 11 811 1084 252 533 1.27e-35 143
MS.gene015375.t1 MTR_1g069570 30.606 330 159 11 809 1084 428 741 1.65e-31 133
MS.gene015375.t1 MTR_7g445810 38.191 199 94 6 576 766 90 267 6.44e-30 120
MS.gene015375.t1 MTR_1g080340 27.920 351 164 10 801 1087 259 584 4.77e-29 124
MS.gene015375.t1 MTR_7g098390 27.108 332 162 9 811 1084 388 697 2.97e-27 119
MS.gene015375.t1 MTR_1g069570 29.389 262 119 9 809 1017 428 676 2.66e-22 103
MS.gene015375.t1 MTR_0071s0100 30.451 266 114 12 832 1088 145 348 3.95e-20 94.4
MS.gene015375.t1 MTR_1g098370 34.359 195 90 9 894 1085 75 234 1.05e-18 91.3
MS.gene015375.t1 MTR_1g098000 33.846 195 91 9 894 1085 72 231 1.97e-18 90.5
MS.gene015375.t1 MTR_3g088625 34.694 196 84 7 899 1088 1307 1464 3.14e-18 91.7
MS.gene015375.t1 MTR_6g059310 30.808 198 103 6 891 1088 87 250 3.26e-18 87.8
MS.gene015375.t1 MTR_3g088625 34.694 196 84 7 899 1088 1201 1358 3.32e-18 91.3
MS.gene015375.t1 MTR_6g059310 30.808 198 103 6 891 1088 87 250 4.54e-18 87.4
MS.gene015375.t1 MTR_6g027690 29.876 241 125 10 854 1088 217 419 9.13e-16 81.6
MS.gene015375.t1 MTR_5g098680 33.333 153 91 3 643 787 267 416 2.13e-14 78.2
MS.gene015375.t1 MTR_8g027725 33.333 156 66 5 915 1064 791 914 1.61e-12 72.4
MS.gene015375.t1 MTR_8g027725 33.333 156 66 5 915 1064 806 929 1.70e-12 72.4
MS.gene015375.t1 MTR_1g064770 43.077 65 36 1 889 952 28 92 5.79e-12 63.2
MS.gene015375.t1 MTR_7g117355 31.410 156 69 4 915 1064 821 944 2.25e-11 68.9
MS.gene015375.t1 MTR_7g055660 31.928 166 74 5 905 1064 570 702 5.15e-11 67.4
MS.gene015375.t1 MTR_6g044000 37.500 104 50 2 584 672 2 105 6.60e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015375.t1 AT2G22740 64.122 524 170 8 581 1089 270 790 0.0 668
MS.gene015375.t1 AT2G22740 64.122 524 170 8 581 1089 270 790 0.0 668
MS.gene015375.t1 AT2G35160 61.122 517 166 6 580 1089 306 794 0.0 652
MS.gene015375.t1 AT2G35160 61.122 517 166 6 580 1089 306 794 0.0 652
MS.gene015375.t1 AT2G35160 61.122 517 166 6 580 1089 306 794 0.0 652
MS.gene015375.t1 AT2G35160 61.122 517 166 6 580 1089 306 794 0.0 652
MS.gene015375.t1 AT2G35160 61.122 517 166 6 580 1089 270 758 0.0 651
MS.gene015375.t1 AT5G04940 41.154 520 289 12 581 1088 155 669 6.83e-120 384
MS.gene015375.t1 AT5G04940 41.154 520 289 12 581 1088 155 669 6.83e-120 384
MS.gene015375.t1 AT5G13960 40.182 550 283 14 570 1089 91 624 1.01e-115 372
MS.gene015375.t1 AT5G13960 42.562 484 245 11 635 1089 11 490 8.11e-115 364
MS.gene015375.t1 AT1G73100 39.439 535 295 13 569 1088 148 668 6.77e-114 368
MS.gene015375.t1 AT4G13460 38.710 527 297 11 555 1063 123 641 2.80e-109 355
MS.gene015375.t1 AT4G13460 38.710 527 297 11 555 1063 123 641 2.80e-109 355
MS.gene015375.t1 AT2G33290 37.673 507 299 7 566 1058 134 637 9.81e-106 346
MS.gene015375.t1 AT2G33290 37.673 507 299 7 566 1058 134 637 9.81e-106 346
MS.gene015375.t1 AT2G33290 37.673 507 299 7 566 1058 134 637 9.81e-106 346
MS.gene015375.t1 AT2G33290 37.673 507 299 7 566 1058 134 637 9.81e-106 346
MS.gene015375.t1 AT1G17770 35.240 542 313 14 569 1088 167 692 3.91e-90 305
MS.gene015375.t1 AT2G24740 37.687 536 287 18 569 1088 250 754 6.74e-88 300
MS.gene015375.t1 AT5G47150 47.685 216 110 3 577 790 114 328 4.57e-52 186
MS.gene015375.t1 AT5G47160 33.118 465 241 16 328 782 3 407 3.42e-51 186
MS.gene015375.t1 AT5G47160 33.118 465 241 16 328 782 3 407 3.42e-51 186
MS.gene015375.t1 AT5G47160 33.118 465 241 16 328 782 3 407 3.42e-51 186
MS.gene015375.t1 AT2G23740 31.915 329 170 11 794 1088 1066 1374 2.43e-35 147
MS.gene015375.t1 AT2G23740 31.915 329 170 11 794 1088 1073 1381 2.75e-35 146
MS.gene015375.t1 AT2G23740 31.915 329 170 11 794 1088 1073 1381 2.75e-35 146
MS.gene015375.t1 AT2G23740 31.915 329 170 11 794 1088 1073 1381 2.75e-35 146
MS.gene015375.t1 AT3G04380 28.035 346 167 11 802 1087 137 460 5.35e-28 119
MS.gene015375.t1 AT3G04380 28.035 346 167 11 802 1087 121 444 5.74e-28 119
MS.gene015375.t1 AT3G04380 28.035 346 167 11 802 1087 110 433 5.81e-28 119
MS.gene015375.t1 AT3G04380 28.035 346 167 11 802 1087 137 460 6.49e-28 119
MS.gene015375.t1 AT3G04380 28.035 346 167 11 802 1087 110 433 7.37e-28 119
MS.gene015375.t1 AT3G04380 28.035 346 167 11 802 1087 94 417 9.66e-28 118
MS.gene015375.t1 AT2G05900 34.483 203 123 6 656 849 1 202 1.45e-27 115
MS.gene015375.t1 AT2G05900 40.244 82 41 2 1005 1086 236 309 4.87e-11 65.9
MS.gene015375.t1 AT2G23740 32.171 258 125 9 794 1017 1073 1314 7.70e-26 116
MS.gene015375.t1 AT2G23740 32.171 258 125 9 794 1017 1073 1314 7.70e-26 116
MS.gene015375.t1 AT1G04050 33.166 199 111 5 892 1087 542 721 1.28e-25 114
MS.gene015375.t1 AT1G04050 33.166 199 111 5 892 1087 542 721 1.28e-25 114
MS.gene015375.t1 AT1G04050 33.166 199 111 5 892 1087 438 617 1.41e-25 114
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 373 684 1.81e-25 114
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 373 684 1.81e-25 114
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 373 684 1.81e-25 114
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 373 684 1.81e-25 114
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 396 707 2.36e-25 113
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 396 707 2.36e-25 113
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 393 704 2.48e-25 113
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 393 704 2.48e-25 113
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 393 704 2.48e-25 113
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 393 704 2.48e-25 113
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 416 727 2.65e-25 113
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 416 727 2.65e-25 113
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 304 615 4.42e-25 112
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 324 635 4.95e-25 112
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 324 635 4.95e-25 112
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 324 635 4.95e-25 112
MS.gene015375.t1 AT5G43990 27.410 332 168 11 809 1087 324 635 4.95e-25 112
MS.gene015375.t1 AT3G03750 30.800 250 126 8 848 1088 138 349 4.64e-22 99.8
MS.gene015375.t1 AT4G30860 31.047 277 126 11 818 1088 247 464 2.17e-19 93.6
MS.gene015375.t1 AT1G76710 33.333 198 94 7 894 1088 66 228 3.05e-19 92.8
MS.gene015375.t1 AT1G76710 33.333 198 94 7 894 1088 66 228 3.05e-19 92.8
MS.gene015375.t1 AT1G76710 33.333 198 94 7 894 1088 66 228 4.02e-19 92.8
MS.gene015375.t1 AT1G76710 33.333 198 94 7 894 1088 66 228 4.68e-19 92.4
MS.gene015375.t1 AT1G77300 33.158 190 95 7 899 1088 1009 1166 1.93e-17 89.0
MS.gene015375.t1 AT1G77300 33.158 190 95 7 899 1088 1009 1166 3.09e-17 88.2
MS.gene015375.t1 AT3G59960 31.395 172 84 6 917 1088 112 249 4.36e-15 77.8
MS.gene015375.t1 AT3G59960 31.395 172 84 6 917 1088 112 249 4.36e-15 77.8
MS.gene015375.t1 AT3G59960 31.395 172 84 6 917 1088 112 249 4.36e-15 77.8
MS.gene015375.t1 AT1G57820 33.117 154 91 4 643 787 277 427 1.64e-14 78.6
MS.gene015375.t1 AT1G57820 33.117 154 91 4 643 787 277 427 1.64e-14 78.6
MS.gene015375.t1 AT3G03750 27.600 250 118 10 848 1088 138 333 9.77e-14 74.3
MS.gene015375.t1 AT1G57820 32.450 151 93 4 643 787 277 424 9.86e-14 76.3
MS.gene015375.t1 AT3G59960 31.395 172 84 6 917 1088 112 249 1.17e-13 73.9
MS.gene015375.t1 AT2G44150 29.651 172 87 6 917 1088 117 254 1.31e-13 74.3
MS.gene015375.t1 AT3G61740 35.032 157 63 6 915 1064 838 962 3.63e-13 74.7
MS.gene015375.t1 AT3G61740 35.032 157 63 6 915 1064 874 998 4.80e-13 74.3
MS.gene015375.t1 AT4G27910 31.098 164 70 6 927 1084 896 1022 3.40e-11 68.2

Find 267 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGATGTTGGTTTAAATT+TGG 0.118788 5.4:-7286693 None:intergenic
TCAATTGGATGTGCCTATTT+TGG 0.119192 5.4:+7285896 MS.gene015375:CDS
TCAAGTGGATGGGGATATTT+TGG 0.160554 5.4:+7285764 MS.gene015375:CDS
GAACATTCTGAAGAAGAATT+AGG 0.193360 5.4:+7285306 MS.gene015375:CDS
ATGGATGTTGGTTTAAATTT+GGG 0.221824 5.4:-7286692 None:intergenic
ATCTTAGTTATGTATTTAAA+TGG 0.224199 5.4:-7287772 None:intergenic
TTTACATAACCACGTGGTTT+TGG 0.228610 5.4:-7286935 None:intergenic
CGTTCAAGCTTCTGATCTTC+TGG 0.239657 5.4:-7287415 None:intergenic
TTCAAACTACTTTCGAGTTC+TGG 0.240711 5.4:-7286593 None:intergenic
GTTAAGAGTGGTGAAGATTT+AGG 0.245357 5.4:+7285462 MS.gene015375:CDS
TGGCCTTCATCGCCAGATTC+AGG 0.250113 5.4:+7287249 MS.gene015375:CDS
AGAATAGAGCTTAATATAAT+TGG 0.267824 5.4:+7287229 MS.gene015375:CDS
TCTTCGTTATTATCCAAAAT+AGG 0.293857 5.4:-7285909 None:intergenic
GGTGATCATAAAGGACATTC+TGG 0.295328 5.4:-7288347 None:intergenic
ATAGCTCCATTATGATTAAA+TGG 0.296004 5.4:-7287904 None:intergenic
TCCTTGAATTCCATCCCTTC+TGG 0.302980 5.4:+7288066 MS.gene015375:CDS
TGCAACTAGTATTGTTGCTT+CGG 0.303684 5.4:+7287309 MS.gene015375:CDS
CTTGAACTTAAGTGCGAATC+TGG 0.307961 5.4:-7288228 None:intergenic
GTTGGAGGGCACTTGCATTT+AGG 0.316799 5.4:-7287961 None:intergenic
GATTTAGGTGGTGGTGATTC+GGG 0.318391 5.4:+7285477 MS.gene015375:CDS
GCAACTAGTATTGTTGCTTC+GGG 0.319658 5.4:+7287310 MS.gene015375:CDS
TGAGTCATATTGGCAGGATA+TGG 0.322593 5.4:+7287555 MS.gene015375:CDS
GGAACCACCTATATTGATAT+TGG 0.323145 5.4:-7286210 None:intergenic
AAAGGCTGTAATTGTACTAA+TGG 0.324470 5.4:+7287829 MS.gene015375:CDS
TGAAGACTGTAGCTTGAAAA+AGG 0.324757 5.4:+7285719 MS.gene015375:CDS
GGGCATGGAAGCTGTGGATA+TGG 0.325224 5.4:+7285818 MS.gene015375:CDS
GGGAAGCCAGTGATGGTAAA+TGG 0.328236 5.4:+7285327 MS.gene015375:CDS
TTAGTACAATTACAGCCTTT+TGG 0.332092 5.4:-7287826 None:intergenic
GGAGACTTTGGATGCGGAAT+TGG 0.341628 5.4:+7285956 MS.gene015375:CDS
TGAAGGAGGCTTTAACTAAA+AGG 0.341984 5.4:+7286243 MS.gene015375:CDS
AAAGGTGTACTAAATCATTC+TGG 0.352831 5.4:+7286794 MS.gene015375:CDS
TTTGATTGAAAAGATGAATT+CGG 0.361033 5.4:+7285260 None:intergenic
AATCTATACCACCCTGAATC+TGG 0.365878 5.4:-7287261 None:intergenic
GAGATTCCATTTAATCATAA+TGG 0.367693 5.4:+7287898 MS.gene015375:CDS
AACATTCTGAAGAAGAATTA+GGG 0.368058 5.4:+7285307 MS.gene015375:CDS
TTGGCTGACTCTATTATAAC+AGG 0.368080 5.4:-7287983 None:intergenic
AGATTTAGGTGGTGGTGATT+CGG 0.370179 5.4:+7285476 MS.gene015375:CDS
AAGATCATGGGATCAGTTCC+TGG 0.371251 5.4:+7287178 MS.gene015375:CDS
CGGTATGGAAACTTCAGATA+TGG 0.371541 5.4:+7286082 MS.gene015375:CDS
GACATTCTGGGCATAGAGAT+TGG 0.378566 5.4:-7288334 None:intergenic
TATGGTGTTCACAGCACATA+TGG 0.381418 5.4:-7287731 None:intergenic
CATGGTCTCATCTCATCAAT+TGG 0.383281 5.4:+7285881 MS.gene015375:CDS
AGAATGATTTAGTACACCTT+TGG 0.384346 5.4:-7286792 None:intergenic
CCGGAAGAATGTGGACCGTT+TGG 0.384555 5.4:+7285414 MS.gene015375:CDS
ACATTCTGGGCATAGAGATT+GGG 0.385745 5.4:-7288333 None:intergenic
TTTATGATCACCATGACAAC+AGG 0.387530 5.4:+7288358 MS.gene015375:CDS
TGATGTTCCCTCGACCTTAA+CGG 0.395045 5.4:-7286552 None:intergenic
GATTCTTTCACATTTGACTT+TGG 0.398140 5.4:-7287088 None:intergenic
TCGTTGTCCAATATCAATAT+AGG 0.398722 5.4:+7286203 MS.gene015375:CDS
ACTTTCCGACGCTTAAACTT+AGG 0.400866 5.4:-7285372 None:intergenic
TTCTACAAACAGCTTGGAAC+AGG 0.402055 5.4:-7287039 None:intergenic
TCAAACTACTTTCGAGTTCT+GGG 0.404581 5.4:-7286592 None:intergenic
AAATGACGGACCTGCAGAAC+TGG 0.405443 5.4:+7286052 MS.gene015375:CDS
TGAAGCTTCAAAAGTGGAAT+TGG 0.409850 5.4:+7285794 MS.gene015375:CDS
GTTTCGCTTGCGAAGAAAGC+CGG 0.413635 5.4:+7287603 MS.gene015375:CDS
TCAAATTGATGAGTCTACTT+TGG 0.415306 5.4:+7286028 MS.gene015375:CDS
GAAAGTAGTGCTAGGTTTGA+TGG 0.415526 5.4:+7286631 MS.gene015375:CDS
AAAATCAGCTTCAACAAAGT+TGG 0.420516 5.4:-7286429 None:intergenic
GCGAGGTCAAGAATTCTGTT+AGG 0.421124 5.4:+7287464 MS.gene015375:CDS
TGTGGTTCTGTGGAATGTAC+TGG 0.421622 5.4:+7288507 MS.gene015375:CDS
CACCCTGAATCTGGCGATGA+AGG 0.425090 5.4:-7287252 None:intergenic
ACTATCGATGCCGCTCAGTT+TGG 0.425253 5.4:+7288276 MS.gene015375:CDS
TCCTCATGTCATGTTATTTG+CGG 0.425495 5.4:+7288383 MS.gene015375:CDS
TGTTGTCATGGTGATCATAA+AGG 0.429329 5.4:-7288356 None:intergenic
GCCAATCTCATCTCAGTAGA+TGG 0.429763 5.4:-7286488 None:intergenic
TCTATGAAGTTGAGTCATAT+TGG 0.437887 5.4:+7287545 MS.gene015375:CDS
GACATAGCTACCTCGCCAAC+TGG 0.438153 5.4:-7286164 None:intergenic
ATTGGTGGGCATGGAGACTT+TGG 0.440213 5.4:+7285944 MS.gene015375:CDS
TGCAATATTGTCCCTCCAAA+AGG 0.442817 5.4:+7287811 MS.gene015375:CDS
GAGTCATATTGGCAGGATAT+GGG 0.443386 5.4:+7287556 MS.gene015375:CDS
GGCGAAGTCAGAATGTCCTT+GGG 0.446249 5.4:+7286652 MS.gene015375:CDS
AGAAGATCAGAAGCTTGAAC+GGG 0.449548 5.4:+7287417 MS.gene015375:CDS
GGAAGCTGTGGATATGGAAT+TGG 0.449691 5.4:+7285824 MS.gene015375:CDS
TCATCACAAACCAACATTGA+TGG 0.455705 5.4:-7285285 None:intergenic
AGTTCCTTCCAAGCAAGCTC+TGG 0.459645 5.4:-7287631 None:intergenic
CGGGTCAACCAGAGCTTGCT+TGG 0.460037 5.4:+7287623 MS.gene015375:CDS
TAAAACCAAGTCAATGGGAT+GGG 0.462217 5.4:+7288035 MS.gene015375:CDS
GCCGCTCAGTTTGGTAATGT+GGG 0.462843 5.4:+7288285 MS.gene015375:CDS
TGGCGAAGTCAGAATGTCCT+TGG 0.463625 5.4:+7286651 MS.gene015375:CDS
TGAACCTGCAAAAGTGGAAT+TGG 0.464663 5.4:+7285662 MS.gene015375:CDS
TGCCGCTCAGTTTGGTAATG+TGG 0.469315 5.4:+7288284 MS.gene015375:CDS
TCCAGAAGGGATGGAATTCA+AGG 0.469469 5.4:-7288067 None:intergenic
GAGTCTCCATTTACCATCAC+TGG 0.471142 5.4:-7285333 None:intergenic
GGCCTTCATCGCCAGATTCA+GGG 0.471401 5.4:+7287250 MS.gene015375:CDS
GGGACAATATTGCAACAATC+AGG 0.476635 5.4:-7287802 None:intergenic
GAATTCTGTTAGGGTGATAC+GGG 0.478791 5.4:+7287474 MS.gene015375:CDS
TCAGTTCCTGGGGTTGAAGT+TGG 0.481794 5.4:+7287190 MS.gene015375:CDS
CAGAAGATCAGAAGCTTGAA+CGG 0.482485 5.4:+7287416 MS.gene015375:CDS
TATGGGGCCACATGGGAAGC+TGG 0.483438 5.4:+7287573 MS.gene015375:CDS
TATAATAGAGTCAGCCAACT+TGG 0.485663 5.4:+7287988 MS.gene015375:CDS
ACACTCATCCTGGCTGAGAC+GGG 0.486717 5.4:-7286330 None:intergenic
AGAATTCTGTTAGGGTGATA+CGG 0.488400 5.4:+7287473 MS.gene015375:CDS
ATCTTATATATCAGAGGCAC+GGG 0.488681 5.4:+7286139 MS.gene015375:CDS
AGAACTCGAAAGTAGTTTGA+AGG 0.490279 5.4:+7286595 MS.gene015375:CDS
ATTTAGTACACCTTTGGACT+TGG 0.490483 5.4:-7286786 None:intergenic
GTCTCATCTCATCAAGTGGA+TGG 0.491155 5.4:+7285753 MS.gene015375:CDS
GTTGAATATTTATGCCAAGT+TGG 0.491644 5.4:-7288002 None:intergenic
CCAAACGGTCCACATTCTTC+CGG 0.491712 5.4:-7285414 None:intergenic
GATATGGAATTTACAACAGA+AGG 0.491786 5.4:+7286098 MS.gene015375:CDS
GGCGCTGGATAATCATCATC+AGG 0.492955 5.4:+7286508 MS.gene015375:CDS
CCGACCAATGCCAGTTCTGC+AGG 0.494283 5.4:-7286062 None:intergenic
AACTAGTATTGTTGCTTCGG+GGG 0.496574 5.4:+7287312 MS.gene015375:CDS
GTTATGTATTTAAATGGAGG+GGG 0.500203 5.4:-7287766 None:intergenic
CTTGGTCGTAGTAATTTAAG+TGG 0.500245 5.4:+7286968 MS.gene015375:CDS
TAATGAAGGGGAGAAGATCA+TGG 0.501403 5.4:+7287165 MS.gene015375:CDS
GGAAAACATGAACACCGTTA+AGG 0.501741 5.4:+7286538 MS.gene015375:CDS
TGGCAGGATATGGGGCCACA+TGG 0.503771 5.4:+7287565 MS.gene015375:CDS
TACTGAGATGAGATTGGCGC+TGG 0.504551 5.4:+7286493 MS.gene015375:CDS
AGCCTCCTTCATACAAGCAC+TGG 0.507216 5.4:-7286231 None:intergenic
AAAACTGACATTGGTGGGCA+TGG 0.507583 5.4:+7285935 MS.gene015375:CDS
TTTCGCTTGCGAAGAAAGCC+GGG 0.508175 5.4:+7287604 MS.gene015375:CDS
CAACGATGAACCTGCAAAAG+TGG 0.509691 5.4:+7285656 MS.gene015375:CDS
AAAGGGAGCTATGTTAATGA+AGG 0.510173 5.4:+7287151 MS.gene015375:CDS
TGTACTGGTAGGTTGTATTG+AGG 0.511536 5.4:+7288522 MS.gene015375:CDS
AAGGTGTACTAAATCATTCT+GGG 0.513245 5.4:+7286795 MS.gene015375:CDS
AAATTTAAACCAACATCCAT+TGG 0.513515 5.4:+7286695 MS.gene015375:CDS
TGATAGTCCCAACGACGAAA+AGG 0.515728 5.4:+7285506 MS.gene015375:CDS
ATTGGTGGGCGTAGAAGCTA+TGG 0.516134 5.4:+7285680 MS.gene015375:CDS
ACCATCTACTGAGATGAGAT+TGG 0.516179 5.4:+7286487 MS.gene015375:CDS
TCAACCAGAGCTTGCTTGGA+AGG 0.518082 5.4:+7287627 MS.gene015375:CDS
AGGGAATGCAGTCAAGAAGT+TGG 0.520693 5.4:+7286454 MS.gene015375:CDS
GTGATCATAAAGGACATTCT+GGG 0.521375 5.4:-7288346 None:intergenic
CTTATCTGATCAAGTGGATG+TGG 0.522415 5.4:+7285623 MS.gene015375:CDS
TACACCCCATCCCATTGACT+TGG 0.523806 5.4:-7288040 None:intergenic
TGAAGACTGTAGCTTGAGAA+AGG 0.523979 5.4:+7285851 MS.gene015375:CDS
CGAGGTCAAGAATTCTGTTA+GGG 0.527113 5.4:+7287465 MS.gene015375:CDS
CTGACTCTATTATAACAGGT+TGG 0.528312 5.4:-7287979 None:intergenic
TGAAGTTGAGTCATATTGGC+AGG 0.528849 5.4:+7287549 MS.gene015375:CDS
CAATGCTCCCCGTCTCAGCC+AGG 0.529270 5.4:+7286322 MS.gene015375:CDS
AAGGAAGCTGAACAAAGAAC+TGG 0.530093 5.4:+7288129 MS.gene015375:CDS
AGCTTCAAAAGTGGAATTGG+TGG 0.531376 5.4:+7285797 MS.gene015375:CDS
TTAAGTGCGAATCTGGCAAA+AGG 0.531752 5.4:-7288221 None:intergenic
ATCGTAAGTCAGCTCTTGCA+AGG 0.532130 5.4:-7288421 None:intergenic
GGACCGTTTGGTTCTGCTGA+TGG 0.532995 5.4:+7285426 MS.gene015375:CDS
TAGTTATGTATTTAAATGGA+GGG 0.533607 5.4:-7287768 None:intergenic
AAGGGAGCTATGTTAATGAA+GGG 0.535402 5.4:+7287152 MS.gene015375:CDS
CCTAGCACTACTTTCCTGCC+TGG 0.535459 5.4:-7286623 None:intergenic
GCTCCTTTAGACACTCATCC+TGG 0.536997 5.4:-7286340 None:intergenic
AAAAGTGGAATTGGTGGGCA+TGG 0.537948 5.4:+7285803 MS.gene015375:CDS
CATTCTGGGCATAGAGATTG+GGG 0.538907 5.4:-7288332 None:intergenic
CAACTAGTATTGTTGCTTCG+GGG 0.538994 5.4:+7287311 MS.gene015375:CDS
TGGTTCCAGTGCTTGTATGA+AGG 0.543235 5.4:+7286226 MS.gene015375:CDS
AGATCATGGGATCAGTTCCT+GGG 0.544056 5.4:+7287179 MS.gene015375:CDS
TAACGATGAAGCTTCAAAAG+TGG 0.544439 5.4:+7285788 MS.gene015375:CDS
GATACAAAACTGACATTGGT+GGG 0.544785 5.4:+7285930 MS.gene015375:CDS
CTCTATTATAACAGGTTGGA+GGG 0.544859 5.4:-7287975 None:intergenic
AAAGCTTTCTACAAACAGCT+TGG 0.545465 5.4:-7287045 None:intergenic
TGGATGTTGGTTTAAATTTG+GGG 0.545850 5.4:-7286691 None:intergenic
CTCATCTCATCAAGTGGATG+GGG 0.546998 5.4:+7285755 MS.gene015375:CDS
AGTTATGTATTTAAATGGAG+GGG 0.547903 5.4:-7287767 None:intergenic
GATAAAACTTCCAGAAGGGA+TGG 0.548978 5.4:-7288076 None:intergenic
TTAGTTATGTATTTAAATGG+AGG 0.549426 5.4:-7287769 None:intergenic
TTAAAACCAAGTCAATGGGA+TGG 0.552622 5.4:+7288034 MS.gene015375:CDS
CGAAGATACAAAACTGACAT+TGG 0.553321 5.4:+7285926 MS.gene015375:CDS
TCTCATCTCATCAAGTGGAT+GGG 0.553872 5.4:+7285754 MS.gene015375:CDS
ACTCTATTATAACAGGTTGG+AGG 0.554328 5.4:-7287976 None:intergenic
GTTTGAAGGTCTCACCAGGC+AGG 0.555243 5.4:+7286609 MS.gene015375:CDS
TATCTTATATATCAGAGGCA+CGG 0.555399 5.4:+7286138 MS.gene015375:CDS
TTTAAACCAACATCCATTGG+TGG 0.555528 5.4:+7286698 MS.gene015375:CDS
AACAACAGTAATCTTTGGGA+TGG 0.558592 5.4:+7288189 MS.gene015375:CDS
GAATTCGGAGCCATCAATGT+TGG 0.558730 5.4:+7285275 MS.gene015375:CDS
CATGAACACCGTTAAGGTCG+AGG 0.559561 5.4:+7286544 MS.gene015375:CDS
AAGTGACTGTAGTTTGAAGA+AGG 0.559982 5.4:+7285587 MS.gene015375:CDS
TCTGTACCACCAATGGATGT+TGG 0.560078 5.4:-7286704 None:intergenic
CAGCCAGGATGAGTGTCTAA+AGG 0.561581 5.4:+7286337 MS.gene015375:CDS
AGAACTGGCATTGGTCGGTA+TGG 0.564148 5.4:+7286067 MS.gene015375:CDS
TTCCAGTGCTTGTATGAAGG+AGG 0.566944 5.4:+7286229 MS.gene015375:CDS
AAATTCTAGTTCTGATGACA+TGG 0.567262 5.4:+7286844 MS.gene015375:CDS
ATGAGAGTGACTCAGTGGCC+CGG 0.569197 5.4:+7286993 MS.gene015375:CDS
CAAGCAAGCTCTGGTTGACC+CGG 0.569213 5.4:-7287622 None:intergenic
CCTGTCATCTGTACCACCAA+TGG 0.569944 5.4:-7286711 None:intergenic
GACACTCATCCTGGCTGAGA+CGG 0.572210 5.4:-7286331 None:intergenic
CCATTGGTGGTACAGATGAC+AGG 0.575959 5.4:+7286711 MS.gene015375:CDS
AAAACCAAGTCAATGGGATG+GGG 0.578324 5.4:+7288036 MS.gene015375:CDS
AAGCCTCTAGTCTATGAGTG+TGG 0.578730 5.4:+7287937 MS.gene015375:CDS
TGGAGAGGTTCTTGAGGACA+AGG 0.580571 5.4:+7288110 MS.gene015375:CDS
AGGGAGCTATGTTAATGAAG+GGG 0.580705 5.4:+7287153 MS.gene015375:CDS
ATTGGTGGGCATGGAAGCTG+TGG 0.583994 5.4:+7285812 MS.gene015375:CDS
GGGCATGGAGACTTTGGATG+CGG 0.586754 5.4:+7285950 MS.gene015375:CDS
TGTGGTCTCATCTCATCAAG+TGG 0.587074 5.4:+7285749 MS.gene015375:CDS
ACTAGTATTGTTGCTTCGGG+GGG 0.588563 5.4:+7287313 MS.gene015375:CDS
CGGACCTGCAGAACTGGCAT+TGG 0.588611 5.4:+7286058 MS.gene015375:CDS
TGCTGATGGTACGAGTGTTG+AGG 0.588615 5.4:+7285440 MS.gene015375:CDS
CACAGATAAAACTTCCAGAA+GGG 0.588807 5.4:-7288080 None:intergenic
GGCAGGATATGGGGCCACAT+GGG 0.589278 5.4:+7287566 MS.gene015375:CDS
AGATACAAAACTGACATTGG+TGG 0.589399 5.4:+7285929 MS.gene015375:CDS
ATGGTGTTCACAGCACATAT+GGG 0.589870 5.4:-7287730 None:intergenic
AGCCTCTAGTCTATGAGTGT+GGG 0.592603 5.4:+7287938 MS.gene015375:CDS
TCACAGATAAAACTTCCAGA+AGG 0.593451 5.4:-7288081 None:intergenic
GGCACGGGCTCCAGTTGGCG+AGG 0.594211 5.4:+7286154 MS.gene015375:CDS
GAGTCTACTTTGGCAAATGA+CGG 0.594825 5.4:+7286038 MS.gene015375:CDS
TAAGTCAGCTCTTGCAAGGG+AGG 0.595124 5.4:-7288417 None:intergenic
CAATTGATGAGATGAGACCA+TGG 0.596287 5.4:-7285880 None:intergenic
CATGAGGAACCCTGTTGTCA+TGG 0.598124 5.4:-7288368 None:intergenic
AAGCAACAATACTAGTTGCA+AGG 0.598665 5.4:-7287306 None:intergenic
AGTAGTTTGAAGGTCTCACC+AGG 0.598759 5.4:+7286605 MS.gene015375:CDS
TCAGAGGCACGGGCTCCAGT+TGG 0.598975 5.4:+7286149 MS.gene015375:CDS
GGATGTTGGTTTAAATTTGG+GGG 0.601362 5.4:-7286690 None:intergenic
AGTCATATTGGCAGGATATG+GGG 0.602342 5.4:+7287557 MS.gene015375:CDS
CCAGGCAGGAAAGTAGTGCT+AGG 0.602466 5.4:+7286623 MS.gene015375:CDS
AATGAAGGGGAGAAGATCAT+GGG 0.604075 5.4:+7287166 MS.gene015375:CDS
TCATCACCAACTTCAACCCC+AGG 0.604148 5.4:-7287196 None:intergenic
TTATGTATTTAAATGGAGGG+GGG 0.605614 5.4:-7287765 None:intergenic
AGTGGTGAAGATTTAGGTGG+TGG 0.605730 5.4:+7285468 MS.gene015375:CDS
TTCCGACGCTTAAACTTAGG+CGG 0.605896 5.4:-7285369 None:intergenic
AGATTTATCTTATATATCAG+AGG 0.608018 5.4:+7286133 MS.gene015375:CDS
CGGGGCTCTGAATCAGCGGA+TGG 0.609088 5.4:+7287493 MS.gene015375:CDS
TGTGGTCTTATCTGATCAAG+TGG 0.612824 5.4:+7285617 MS.gene015375:CDS
TATCTGTGAATATATTGGAG+AGG 0.613185 5.4:+7288095 MS.gene015375:CDS
GCTTCAAAAGTGGAATTGGT+GGG 0.613307 5.4:+7285798 MS.gene015375:CDS
ACCTGCAAAAGTGGAATTGG+TGG 0.613722 5.4:+7285665 MS.gene015375:CDS
TGGTGGTACAGATGACAGGA+AGG 0.614455 5.4:+7286715 MS.gene015375:CDS
AGAATTAGGGAAGCCAGTGA+TGG 0.615410 5.4:+7285320 MS.gene015375:CDS
AATTGATGAGATGAGACCAT+GGG 0.617974 5.4:-7285879 None:intergenic
AGTGAAGTAGTGAATGATGT+TGG 0.618250 5.4:+7288249 MS.gene015375:CDS
AGCAAGATATATGTTTACGA+TGG 0.618907 5.4:+7287520 MS.gene015375:CDS
CTTGAGAAAGGAAGATCCCA+TGG 0.621289 5.4:+7285863 MS.gene015375:CDS
ATCCGCCTAAGTTTAAGCGT+CGG 0.622802 5.4:+7285367 MS.gene015375:CDS
ATGAACACCGTTAAGGTCGA+GGG 0.623227 5.4:+7286545 MS.gene015375:CDS
GTACCATCAGCAGAACCAAA+CGG 0.623497 5.4:-7285429 None:intergenic
TAATCATCATCAGGTTAAAG+CGG 0.623645 5.4:+7286517 MS.gene015375:CDS
CACTCATCCTGGCTGAGACG+GGG 0.624068 5.4:-7286329 None:intergenic
TTATCTGATCAAGTGGATGT+GGG 0.624073 5.4:+7285624 MS.gene015375:CDS
GGCCCACACTCATAGACTAG+AGG 0.626323 5.4:-7287940 None:intergenic
CAAATGTGAAAGAATCAAAG+AGG 0.632909 5.4:+7287095 MS.gene015375:CDS
TTGTCCAATATCAATATAGG+TGG 0.635936 5.4:+7286206 MS.gene015375:CDS
TGCTTTGAAGAATAGTAGCG+AGG 0.636465 5.4:+7287447 MS.gene015375:CDS
GATACGGGGCTCTGAATCAG+CGG 0.636898 5.4:+7287489 MS.gene015375:CDS
CCTGCAGAACTGGCATTGGT+CGG 0.637297 5.4:+7286062 MS.gene015375:CDS
ACTTGATCAGATAAGACCAC+AGG 0.642209 5.4:-7285615 None:intergenic
ACTTGATGAGATGAGACCAC+AGG 0.643420 5.4:-7285747 None:intergenic
AAAACTGCGACCAAGTCCAA+AGG 0.643866 5.4:+7286776 MS.gene015375:CDS
CATGGGTCAATTAGTAACAC+GGG 0.644532 5.4:+7286862 MS.gene015375:CDS
TTTGAAGAAGGAGGATCCTG+TGG 0.645117 5.4:+7285599 MS.gene015375:CDS
TCGTAAGTCAGCTCTTGCAA+GGG 0.649908 5.4:-7288420 None:intergenic
CCGCTCAGTTTGGTAATGTG+GGG 0.650291 5.4:+7288286 MS.gene015375:CDS
AAATGTGAAAGAATCAAAGA+GGG 0.651541 5.4:+7287096 MS.gene015375:CDS
ACGAGTGTTGAGGTTAAGAG+TGG 0.652765 5.4:+7285450 MS.gene015375:CDS
GATCAAGTTCGTGATTCCGA+TGG 0.655471 5.4:+7288459 MS.gene015375:CDS
ATATATTGGAGAGGTTCTTG+AGG 0.657084 5.4:+7288104 MS.gene015375:CDS
ACATGGGTCAATTAGTAACA+CGG 0.669242 5.4:+7286861 MS.gene015375:CDS
AAGAGTGGTGAAGATTTAGG+TGG 0.670342 5.4:+7285465 MS.gene015375:CDS
CTTAAATTACTACGACCAAG+AGG 0.670569 5.4:-7286965 None:intergenic
GCCGCAAATAACATGACATG+AGG 0.673823 5.4:-7288384 None:intergenic
CAGTGGCCCGGAATAAAGTG+AGG 0.675048 5.4:+7287005 MS.gene015375:CDS
GTTCTGTGGAATGTACTGGT+AGG 0.675695 5.4:+7288511 MS.gene015375:CDS
GATCATGGGATCAGTTCCTG+GGG 0.678571 5.4:+7287180 MS.gene015375:CDS
AATTCTAGTTCTGATGACAT+GGG 0.681067 5.4:+7286845 MS.gene015375:CDS
GGTGGTACAGATGACAGGAA+GGG 0.684498 5.4:+7286716 MS.gene015375:CDS
TTGATATATACAGGGCAGGG+TGG 0.688777 5.4:+7287367 MS.gene015375:CDS
TTATGATCACCATGACAACA+GGG 0.689712 5.4:+7288359 MS.gene015375:CDS
TGACTGTAGTTTGAAGAAGG+AGG 0.692610 5.4:+7285590 MS.gene015375:CDS
TGGTCATGAGAGTGACTCAG+TGG 0.696808 5.4:+7286988 MS.gene015375:CDS
GAAGATCAGAAGCTTGAACG+GGG 0.698030 5.4:+7287418 MS.gene015375:CDS
GCGAAGTCAGAATGTCCTTG+GGG 0.700207 5.4:+7286653 MS.gene015375:CDS
CCTGCAAAAGTGGAATTGGT+GGG 0.702732 5.4:+7285666 MS.gene015375:CDS
AAAAGTGTCCCAAAACCACG+TGG 0.710733 5.4:+7286926 MS.gene015375:CDS
GCATTGCGTCCACATAAACG+TGG 0.716479 5.4:-7286305 None:intergenic
TTATAAACCAGCTTCCCATG+TGG 0.718258 5.4:-7287580 None:intergenic
GAACAAATATCAGATCCCCA+AGG 0.723725 5.4:-7286668 None:intergenic
CCCCACATTACCAAACTGAG+CGG 0.724747 5.4:-7288286 None:intergenic
GTACACAAGAACATTTCTCG+TGG 0.725371 5.4:-7287861 None:intergenic
CTTCATCGCCAGATTCAGGG+TGG 0.729437 5.4:+7287253 MS.gene015375:CDS
AATTCTGTTAGGGTGATACG+GGG 0.749765 5.4:+7287475 MS.gene015375:CDS
AAAACATTTACATAACCACG+TGG 0.753070 5.4:-7286941 None:intergenic
TATATTGATATTGGACAACG+AGG 0.767583 5.4:-7286201 None:intergenic
ATTCTGGGCATAGAGATTGG+GGG 0.768685 5.4:-7288331 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTTAGTTATGTATTTAAA+TGG - chr5.4:7287775-7287794 None:intergenic 15.0%
!!! ATAAGATAAATCTTGTTTTA+CGG - chr5.4:7286126-7286145 None:intergenic 15.0%
!! AGAATAGAGCTTAATATAAT+TGG + chr5.4:7287229-7287248 MS.gene015375:CDS 20.0%
!! AGATTTATCTTATATATCAG+AGG + chr5.4:7286133-7286152 MS.gene015375:CDS 20.0%
!! TAGTTATGTATTTAAATGGA+GGG - chr5.4:7287771-7287790 None:intergenic 20.0%
!! TTAGTTATGTATTTAAATGG+AGG - chr5.4:7287772-7287791 None:intergenic 20.0%
!! TTATATGAAGCAAAAAAACA+AGG + chr5.4:7287282-7287301 MS.gene015375:CDS 20.0%
!!! AAGTGTTTGTTATTTTCATT+AGG - chr5.4:7286905-7286924 None:intergenic 20.0%
!!! AATTTTTAAAACCAAGTCAA+TGG + chr5.4:7288029-7288048 MS.gene015375:CDS 20.0%
!!! AGTTTTATCTGTGAATATAT+TGG + chr5.4:7288090-7288109 MS.gene015375:CDS 20.0%
!!! ATTTTTAAAACCAAGTCAAT+GGG + chr5.4:7288030-7288049 MS.gene015375:CDS 20.0%
!!! TTTTCTCTTTTCTTTTTCAA+CGG - chr5.4:7286827-7286846 None:intergenic 20.0%
! AAATGTGAAAGAATCAAAGA+GGG + chr5.4:7287096-7287115 MS.gene015375:CDS 25.0%
! AAATTTAAACCAACATCCAT+TGG + chr5.4:7286695-7286714 MS.gene015375:CDS 25.0%
! AAGTTCAACAAAAAAAGAGA+AGG + chr5.4:7287667-7287686 MS.gene015375:CDS 25.0%
! ACAAAAACAACAGTAATCTT+TGG + chr5.4:7288184-7288203 MS.gene015375:CDS 25.0%
! ACAAGCTTCAAAAATACTTA+AGG + chr5.4:7287126-7287145 MS.gene015375:CDS 25.0%
! AGTTATGTATTTAAATGGAG+GGG - chr5.4:7287770-7287789 None:intergenic 25.0%
! ATAGCTCCATTATGATTAAA+TGG - chr5.4:7287907-7287926 None:intergenic 25.0%
! CAAAAACAACAGTAATCTTT+GGG + chr5.4:7288185-7288204 MS.gene015375:CDS 25.0%
! CAAAAATACTTAAGGAGAAA+GGG + chr5.4:7287134-7287153 MS.gene015375:CDS 25.0%
! GAGATTCCATTTAATCATAA+TGG + chr5.4:7287898-7287917 MS.gene015375:CDS 25.0%
! TCAAAAATACTTAAGGAGAA+AGG + chr5.4:7287133-7287152 MS.gene015375:CDS 25.0%
! TCTTCGTTATTATCCAAAAT+AGG - chr5.4:7285912-7285931 None:intergenic 25.0%
!! AACATTCTGAAGAAGAATTA+GGG + chr5.4:7285307-7285326 MS.gene015375:CDS 25.0%
!! GATGAGTATCTTTTTGATAT+TGG + chr5.4:7288156-7288175 MS.gene015375:CDS 25.0%
!! TATGTAAATGTTTTTCCTCT+TGG + chr5.4:7286950-7286969 MS.gene015375:CDS 25.0%
!! TCATTGAACTCAAAATTTTG+AGG - chr5.4:7285534-7285553 None:intergenic 25.0%
!! TTTCTTTTTGATATTGCCAT+CGG - chr5.4:7288478-7288497 None:intergenic 25.0%
!!! AAAAAGAAATACTGCTTTTG+TGG + chr5.4:7288489-7288508 MS.gene015375:CDS 25.0%
!!! AATGGATGTTGGTTTAAATT+TGG - chr5.4:7286696-7286715 None:intergenic 25.0%
!!! ATGGATGTTGGTTTAAATTT+GGG - chr5.4:7286695-7286714 None:intergenic 25.0%
!!! CAGATGTTTTGATATATACA+GGG + chr5.4:7287359-7287378 MS.gene015375:CDS 25.0%
AAAACATTTACATAACCACG+TGG - chr5.4:7286944-7286963 None:intergenic 30.0%
AAAATCAGCTTCAACAAAGT+TGG - chr5.4:7286432-7286451 None:intergenic 30.0%
AAAGGCTGTAATTGTACTAA+TGG + chr5.4:7287829-7287848 MS.gene015375:CDS 30.0%
AAGGTGTACTAAATCATTCT+GGG + chr5.4:7286795-7286814 MS.gene015375:CDS 30.0%
AGAATGATTTAGTACACCTT+TGG - chr5.4:7286795-7286814 None:intergenic 30.0%
AGCAAGATATATGTTTACGA+TGG + chr5.4:7287520-7287539 MS.gene015375:CDS 30.0%
CAAATGTGAAAGAATCAAAG+AGG + chr5.4:7287095-7287114 MS.gene015375:CDS 30.0%
GATATGGAATTTACAACAGA+AGG + chr5.4:7286098-7286117 MS.gene015375:CDS 30.0%
GTTATGTATTTAAATGGAGG+GGG - chr5.4:7287769-7287788 None:intergenic 30.0%
GTTCTTGTGTACTCAAAAAT+GGG + chr5.4:7287872-7287891 MS.gene015375:CDS 30.0%
GTTGAATATTTATGCCAAGT+TGG - chr5.4:7288005-7288024 None:intergenic 30.0%
TAATCATCATCAGGTTAAAG+CGG + chr5.4:7286517-7286536 MS.gene015375:CDS 30.0%
TATATTGATATTGGACAACG+AGG - chr5.4:7286204-7286223 None:intergenic 30.0%
TATCTGTGAATATATTGGAG+AGG + chr5.4:7288095-7288114 MS.gene015375:CDS 30.0%
TATCTTATATATCAGAGGCA+CGG + chr5.4:7286138-7286157 MS.gene015375:CDS 30.0%
TCAAATTGATGAGTCTACTT+TGG + chr5.4:7286028-7286047 MS.gene015375:CDS 30.0%
TCGTTGTCCAATATCAATAT+AGG + chr5.4:7286203-7286222 MS.gene015375:CDS 30.0%
TCTATGAAGTTGAGTCATAT+TGG + chr5.4:7287545-7287564 MS.gene015375:CDS 30.0%
TGTTCTTGTGTACTCAAAAA+TGG + chr5.4:7287871-7287890 MS.gene015375:CDS 30.0%
TTATGTATTTAAATGGAGGG+GGG - chr5.4:7287768-7287787 None:intergenic 30.0%
TTCTTGTGTACTCAAAAATG+GGG + chr5.4:7287873-7287892 MS.gene015375:CDS 30.0%
TTGTCCAATATCAATATAGG+TGG + chr5.4:7286206-7286225 MS.gene015375:CDS 30.0%
! AAAGGTGTACTAAATCATTC+TGG + chr5.4:7286794-7286813 MS.gene015375:CDS 30.0%
! ATGTTTTCCTCACTTTATTC+CGG - chr5.4:7287015-7287034 None:intergenic 30.0%
! GAACATTCTGAAGAAGAATT+AGG + chr5.4:7285306-7285325 MS.gene015375:CDS 30.0%
! GATTCTTTCACATTTGACTT+TGG - chr5.4:7287091-7287110 None:intergenic 30.0%
! TTAGTACAATTACAGCCTTT+TGG - chr5.4:7287829-7287848 None:intergenic 30.0%
!! AAATTCTAGTTCTGATGACA+TGG + chr5.4:7286844-7286863 MS.gene015375:CDS 30.0%
!! AATTCTAGTTCTGATGACAT+GGG + chr5.4:7286845-7286864 MS.gene015375:CDS 30.0%
!! TGGATGTTGGTTTAAATTTG+GGG - chr5.4:7286694-7286713 None:intergenic 30.0%
!! TTGTTGAAGCTGATTTTGAA+GGG + chr5.4:7286435-7286454 MS.gene015375:CDS 30.0%
!! TTTGTTGAAGCTGATTTTGA+AGG + chr5.4:7286434-7286453 MS.gene015375:CDS 30.0%
!!! GCAGATGTTTTGATATATAC+AGG + chr5.4:7287358-7287377 MS.gene015375:CDS 30.0%
!!! TGTTATTTTCTGCTTCTTGT+AGG - chr5.4:7286397-7286416 None:intergenic 30.0%
AAAGCTTTCTACAAACAGCT+TGG - chr5.4:7287048-7287067 None:intergenic 35.0%
AAAGGGAGCTATGTTAATGA+AGG + chr5.4:7287151-7287170 MS.gene015375:CDS 35.0%
AAGCAACAATACTAGTTGCA+AGG - chr5.4:7287309-7287328 None:intergenic 35.0%
AAGGGAGCTATGTTAATGAA+GGG + chr5.4:7287152-7287171 MS.gene015375:CDS 35.0%
AAGTGACTGTAGTTTGAAGA+AGG + chr5.4:7285587-7285606 MS.gene015375:CDS 35.0%
AATTGATGAGATGAGACCAT+GGG - chr5.4:7285882-7285901 None:intergenic 35.0%
ACATGGGTCAATTAGTAACA+CGG + chr5.4:7286861-7286880 MS.gene015375:CDS 35.0%
AGAACTCGAAAGTAGTTTGA+AGG + chr5.4:7286595-7286614 MS.gene015375:CDS 35.0%
AGAATTCTGTTAGGGTGATA+CGG + chr5.4:7287473-7287492 MS.gene015375:CDS 35.0%
AGATACAAAACTGACATTGG+TGG + chr5.4:7285929-7285948 MS.gene015375:CDS 35.0%
AGTGAAGTAGTGAATGATGT+TGG + chr5.4:7288249-7288268 MS.gene015375:CDS 35.0%
ATATATTGGAGAGGTTCTTG+AGG + chr5.4:7288104-7288123 MS.gene015375:CDS 35.0%
ATTTAGTACACCTTTGGACT+TGG - chr5.4:7286789-7286808 None:intergenic 35.0%
CACAGATAAAACTTCCAGAA+GGG - chr5.4:7288083-7288102 None:intergenic 35.0%
CGAAGATACAAAACTGACAT+TGG + chr5.4:7285926-7285945 MS.gene015375:CDS 35.0%
CTGACTCTATTATAACAGGT+TGG - chr5.4:7287982-7288001 None:intergenic 35.0%
CTTAAATTACTACGACCAAG+AGG - chr5.4:7286968-7286987 None:intergenic 35.0%
CTTGGTCGTAGTAATTTAAG+TGG + chr5.4:7286968-7286987 MS.gene015375:CDS 35.0%
GATACAAAACTGACATTGGT+GGG + chr5.4:7285930-7285949 MS.gene015375:CDS 35.0%
GGAACCACCTATATTGATAT+TGG - chr5.4:7286213-7286232 None:intergenic 35.0%
GTGATCATAAAGGACATTCT+GGG - chr5.4:7288349-7288368 None:intergenic 35.0%
GTTAAGAGTGGTGAAGATTT+AGG + chr5.4:7285462-7285481 MS.gene015375:CDS 35.0%
TAAAACCAAGTCAATGGGAT+GGG + chr5.4:7288035-7288054 MS.gene015375:CDS 35.0%
TAACGATGAAGCTTCAAAAG+TGG + chr5.4:7285788-7285807 MS.gene015375:CDS 35.0%
TATAATAGAGTCAGCCAACT+TGG + chr5.4:7287988-7288007 MS.gene015375:CDS 35.0%
TCACAGATAAAACTTCCAGA+AGG - chr5.4:7288084-7288103 None:intergenic 35.0%
TCATCACAAACCAACATTGA+TGG - chr5.4:7285288-7285307 None:intergenic 35.0%
TCTTGTGTACTCAAAAATGG+GGG + chr5.4:7287874-7287893 MS.gene015375:CDS 35.0%
TGAAGACTGTAGCTTGAAAA+AGG + chr5.4:7285719-7285738 MS.gene015375:CDS 35.0%
TGAAGCTTCAAAAGTGGAAT+TGG + chr5.4:7285794-7285813 MS.gene015375:CDS 35.0%
TGTTGTCATGGTGATCATAA+AGG - chr5.4:7288359-7288378 None:intergenic 35.0%
TTAAAACCAAGTCAATGGGA+TGG + chr5.4:7288034-7288053 MS.gene015375:CDS 35.0%
TTATCTGATCAAGTGGATGT+GGG + chr5.4:7285624-7285643 MS.gene015375:CDS 35.0%
TTATGATCACCATGACAACA+GGG + chr5.4:7288359-7288378 MS.gene015375:CDS 35.0%
TTTAAACCAACATCCATTGG+TGG + chr5.4:7286698-7286717 MS.gene015375:CDS 35.0%
TTTATGATCACCATGACAAC+AGG + chr5.4:7288358-7288377 MS.gene015375:CDS 35.0%
! AACAACAGTAATCTTTGGGA+TGG + chr5.4:7288189-7288208 MS.gene015375:CDS 35.0%
! ACTCTATTATAACAGGTTGG+AGG - chr5.4:7287979-7287998 None:intergenic 35.0%
! AGAGATTTTCCACGTTTATG+TGG + chr5.4:7286296-7286315 MS.gene015375:CDS 35.0%
! ATCTTATATATCAGAGGCAC+GGG + chr5.4:7286139-7286158 MS.gene015375:CDS 35.0%
! CGCGTTTTTGATATTTCCTA+CGG + chr5.4:7287694-7287713 MS.gene015375:CDS 35.0%
! CTCTATTATAACAGGTTGGA+GGG - chr5.4:7287978-7287997 None:intergenic 35.0%
! GCGTTTTTGATATTTCCTAC+GGG + chr5.4:7287695-7287714 MS.gene015375:CDS 35.0%
! TACAATTACAGCCTTTTGGA+GGG - chr5.4:7287825-7287844 None:intergenic 35.0%
! TCAATTGGATGTGCCTATTT+TGG + chr5.4:7285896-7285915 MS.gene015375:CDS 35.0%
! TCCTCATGTCATGTTATTTG+CGG + chr5.4:7288383-7288402 MS.gene015375:CDS 35.0%
! TGAAGGAGGCTTTAACTAAA+AGG + chr5.4:7286243-7286262 MS.gene015375:CDS 35.0%
! TGCAACTAGTATTGTTGCTT+CGG + chr5.4:7287309-7287328 MS.gene015375:CDS 35.0%
! TGTTTGTAGAAAGCTTTTGC+AGG + chr5.4:7287051-7287070 MS.gene015375:CDS 35.0%
! TGTTTTCCTCACTTTATTCC+GGG - chr5.4:7287014-7287033 None:intergenic 35.0%
! TTACATAACCACGTGGTTTT+GGG - chr5.4:7286937-7286956 None:intergenic 35.0%
! TTGGCTGACTCTATTATAAC+AGG - chr5.4:7287986-7288005 None:intergenic 35.0%
! TTTACATAACCACGTGGTTT+TGG - chr5.4:7286938-7286957 None:intergenic 35.0%
!! GGATGTTGGTTTAAATTTGG+GGG - chr5.4:7286693-7286712 None:intergenic 35.0%
!! GTTTTGATATATACAGGGCA+GGG + chr5.4:7287364-7287383 MS.gene015375:CDS 35.0%
!! TCAAACTACTTTCGAGTTCT+GGG - chr5.4:7286595-7286614 None:intergenic 35.0%
!! TTCAAACTACTTTCGAGTTC+TGG - chr5.4:7286596-7286615 None:intergenic 35.0%
!!! TGTTTTGATATATACAGGGC+AGG + chr5.4:7287363-7287382 MS.gene015375:CDS 35.0%
AAAACCAAGTCAATGGGATG+GGG + chr5.4:7288036-7288055 MS.gene015375:CDS 40.0%
AAGAGTGGTGAAGATTTAGG+TGG + chr5.4:7285465-7285484 MS.gene015375:CDS 40.0%
AAGGAAGCTGAACAAAGAAC+TGG + chr5.4:7288129-7288148 MS.gene015375:CDS 40.0%
AATCTATACCACCCTGAATC+TGG - chr5.4:7287264-7287283 None:intergenic 40.0%
AATGAAGGGGAGAAGATCAT+GGG + chr5.4:7287166-7287185 MS.gene015375:CDS 40.0%
AATTCTGTTAGGGTGATACG+GGG + chr5.4:7287475-7287494 MS.gene015375:CDS 40.0%
ACATTCTGGGCATAGAGATT+GGG - chr5.4:7288336-7288355 None:intergenic 40.0%
ACCATCTACTGAGATGAGAT+TGG + chr5.4:7286487-7286506 MS.gene015375:CDS 40.0%
ACTTGATCAGATAAGACCAC+AGG - chr5.4:7285618-7285637 None:intergenic 40.0%
ACTTTCCGACGCTTAAACTT+AGG - chr5.4:7285375-7285394 None:intergenic 40.0%
AGAAGATCAGAAGCTTGAAC+GGG + chr5.4:7287417-7287436 MS.gene015375:CDS 40.0%
AGCTTCAAAAGTGGAATTGG+TGG + chr5.4:7285797-7285816 MS.gene015375:CDS 40.0%
AGGGAGCTATGTTAATGAAG+GGG + chr5.4:7287153-7287172 MS.gene015375:CDS 40.0%
AGTCATATTGGCAGGATATG+GGG + chr5.4:7287557-7287576 MS.gene015375:CDS 40.0%
ATGGTGTTCACAGCACATAT+GGG - chr5.4:7287733-7287752 None:intergenic 40.0%
CAATTGATGAGATGAGACCA+TGG - chr5.4:7285883-7285902 None:intergenic 40.0%
CAGAAGATCAGAAGCTTGAA+CGG + chr5.4:7287416-7287435 MS.gene015375:CDS 40.0%
CATGGGTCAATTAGTAACAC+GGG + chr5.4:7286862-7286881 MS.gene015375:CDS 40.0%
CATGGTCTCATCTCATCAAT+TGG + chr5.4:7285881-7285900 MS.gene015375:CDS 40.0%
CGAGGTCAAGAATTCTGTTA+GGG + chr5.4:7287465-7287484 MS.gene015375:CDS 40.0%
CGGTATGGAAACTTCAGATA+TGG + chr5.4:7286082-7286101 MS.gene015375:CDS 40.0%
CTTATCTGATCAAGTGGATG+TGG + chr5.4:7285623-7285642 MS.gene015375:CDS 40.0%
CTTGAAAAAGGAAGATCCTG+TGG + chr5.4:7285731-7285750 MS.gene015375:CDS 40.0%
CTTGAACTTAAGTGCGAATC+TGG - chr5.4:7288231-7288250 None:intergenic 40.0%
CTTGTGTACTCAAAAATGGG+GGG + chr5.4:7287875-7287894 MS.gene015375:CDS 40.0%
GAAAGTAGTGCTAGGTTTGA+TGG + chr5.4:7286631-7286650 MS.gene015375:CDS 40.0%
GAACAAATATCAGATCCCCA+AGG - chr5.4:7286671-7286690 None:intergenic 40.0%
GAATTCTGTTAGGGTGATAC+GGG + chr5.4:7287474-7287493 MS.gene015375:CDS 40.0%
GAGTCATATTGGCAGGATAT+GGG + chr5.4:7287556-7287575 MS.gene015375:CDS 40.0%
GAGTCTACTTTGGCAAATGA+CGG + chr5.4:7286038-7286057 MS.gene015375:CDS 40.0%
GATAAAACTTCCAGAAGGGA+TGG - chr5.4:7288079-7288098 None:intergenic 40.0%
GCTTCAAAAGTGGAATTGGT+GGG + chr5.4:7285798-7285817 MS.gene015375:CDS 40.0%
GGAAAACATGAACACCGTTA+AGG + chr5.4:7286538-7286557 MS.gene015375:CDS 40.0%
GGGACAATATTGCAACAATC+AGG - chr5.4:7287805-7287824 None:intergenic 40.0%
GGTGATCATAAAGGACATTC+TGG - chr5.4:7288350-7288369 None:intergenic 40.0%
GTACACAAGAACATTTCTCG+TGG - chr5.4:7287864-7287883 None:intergenic 40.0%
TAATGAAGGGGAGAAGATCA+TGG + chr5.4:7287165-7287184 MS.gene015375:CDS 40.0%
TATGGTGTTCACAGCACATA+TGG - chr5.4:7287734-7287753 None:intergenic 40.0%
TCTCATCTCATCAAGTGGAT+GGG + chr5.4:7285754-7285773 MS.gene015375:CDS 40.0%
TGAACCTGCAAAAGTGGAAT+TGG + chr5.4:7285662-7285681 MS.gene015375:CDS 40.0%
TGAAGACTGTAGCTTGAGAA+AGG + chr5.4:7285851-7285870 MS.gene015375:CDS 40.0%
TGAAGTTGAGTCATATTGGC+AGG + chr5.4:7287549-7287568 MS.gene015375:CDS 40.0%
TGACTGTAGTTTGAAGAAGG+AGG + chr5.4:7285590-7285609 MS.gene015375:CDS 40.0%
TGAGTCATATTGGCAGGATA+TGG + chr5.4:7287555-7287574 MS.gene015375:CDS 40.0%
TGCAATATTGTCCCTCCAAA+AGG + chr5.4:7287811-7287830 MS.gene015375:CDS 40.0%
TTAAGTGCGAATCTGGCAAA+AGG - chr5.4:7288224-7288243 None:intergenic 40.0%
TTATAAACCAGCTTCCCATG+TGG - chr5.4:7287583-7287602 None:intergenic 40.0%
TTCTACAAACAGCTTGGAAC+AGG - chr5.4:7287042-7287061 None:intergenic 40.0%
TTGTGTACTCAAAAATGGGG+GGG + chr5.4:7287876-7287895 MS.gene015375:CDS 40.0%
! AACTAGTATTGTTGCTTCGG+GGG + chr5.4:7287312-7287331 MS.gene015375:CDS 40.0%
! AGATTTAGGTGGTGGTGATT+CGG + chr5.4:7285476-7285495 MS.gene015375:CDS 40.0%
! CAACTAGTATTGTTGCTTCG+GGG + chr5.4:7287311-7287330 MS.gene015375:CDS 40.0%
! GCAACTAGTATTGTTGCTTC+GGG + chr5.4:7287310-7287329 MS.gene015375:CDS 40.0%
! GTACAATTACAGCCTTTTGG+AGG - chr5.4:7287826-7287845 None:intergenic 40.0%
! TAGAAAGCTTTTGCAGGAAG+CGG + chr5.4:7287057-7287076 MS.gene015375:CDS 40.0%
! TCAAGTGGATGGGGATATTT+TGG + chr5.4:7285764-7285783 MS.gene015375:CDS 40.0%
! TTCTGCTGTTCGTGATTTTC+CGG + chr5.4:7285395-7285414 MS.gene015375:CDS 40.0%
!! AGTTGATTTTTATGCCCACC+TGG + chr5.4:7286745-7286764 MS.gene015375:CDS 40.0%
!! ATACTGCTTTTGTGGTTCTG+TGG + chr5.4:7288497-7288516 MS.gene015375:CDS 40.0%
!! TGCTTTGAAGAATAGTAGCG+AGG + chr5.4:7287447-7287466 MS.gene015375:CDS 40.0%
!! TGTGGTCTTATCTGATCAAG+TGG + chr5.4:7285617-7285636 MS.gene015375:CDS 40.0%
!!! AACGCTGCAACTTTTTTACG+AGG - chr5.4:7286275-7286294 None:intergenic 40.0%
!!! CTCTTTTCTTTTTCAACGGC+TGG - chr5.4:7286823-7286842 None:intergenic 40.0%
AAAACTGCGACCAAGTCCAA+AGG + chr5.4:7286776-7286795 MS.gene015375:CDS 45.0%
AAGATCATGGGATCAGTTCC+TGG + chr5.4:7287178-7287197 MS.gene015375:CDS 45.0%
AAGCCTCTAGTCTATGAGTG+TGG + chr5.4:7287937-7287956 MS.gene015375:CDS 45.0%
ACCTGCAAAAGTGGAATTGG+TGG + chr5.4:7285665-7285684 MS.gene015375:CDS 45.0%
ACTTGATGAGATGAGACCAC+AGG - chr5.4:7285750-7285769 None:intergenic 45.0%
AGAATTAGGGAAGCCAGTGA+TGG + chr5.4:7285320-7285339 MS.gene015375:CDS 45.0%
AGATCATGGGATCAGTTCCT+GGG + chr5.4:7287179-7287198 MS.gene015375:CDS 45.0%
AGCCTCTAGTCTATGAGTGT+GGG + chr5.4:7287938-7287957 MS.gene015375:CDS 45.0%
AGGGAATGCAGTCAAGAAGT+TGG + chr5.4:7286454-7286473 MS.gene015375:CDS 45.0%
AGTAGTTTGAAGGTCTCACC+AGG + chr5.4:7286605-7286624 MS.gene015375:CDS 45.0%
AGTGGTGAAGATTTAGGTGG+TGG + chr5.4:7285468-7285487 MS.gene015375:CDS 45.0%
ATCCGCCTAAGTTTAAGCGT+CGG + chr5.4:7285367-7285386 MS.gene015375:CDS 45.0%
ATCGTAAGTCAGCTCTTGCA+AGG - chr5.4:7288424-7288443 None:intergenic 45.0%
ATGAACACCGTTAAGGTCGA+GGG + chr5.4:7286545-7286564 MS.gene015375:CDS 45.0%
ATTCTGGGCATAGAGATTGG+GGG - chr5.4:7288334-7288353 None:intergenic 45.0%
CAACGATGAACCTGCAAAAG+TGG + chr5.4:7285656-7285675 MS.gene015375:CDS 45.0%
CATTCTGGGCATAGAGATTG+GGG - chr5.4:7288335-7288354 None:intergenic 45.0%
CCTGCAAAAGTGGAATTGGT+GGG + chr5.4:7285666-7285685 MS.gene015375:CDS 45.0%
CGTTCAAGCTTCTGATCTTC+TGG - chr5.4:7287418-7287437 None:intergenic 45.0%
CTCATCTCATCAAGTGGATG+GGG + chr5.4:7285755-7285774 MS.gene015375:CDS 45.0%
CTTGAGAAAGGAAGATCCCA+TGG + chr5.4:7285863-7285882 MS.gene015375:CDS 45.0%
GAAGATCAGAAGCTTGAACG+GGG + chr5.4:7287418-7287437 MS.gene015375:CDS 45.0%
GAATTCGGAGCCATCAATGT+TGG + chr5.4:7285275-7285294 MS.gene015375:CDS 45.0%
GACATTCTGGGCATAGAGAT+TGG - chr5.4:7288337-7288356 None:intergenic 45.0%
GAGTCTCCATTTACCATCAC+TGG - chr5.4:7285336-7285355 None:intergenic 45.0%
GATCAAGTTCGTGATTCCGA+TGG + chr5.4:7288459-7288478 MS.gene015375:CDS 45.0%
GCCAATCTCATCTCAGTAGA+TGG - chr5.4:7286491-7286510 None:intergenic 45.0%
GCCGCAAATAACATGACATG+AGG - chr5.4:7288387-7288406 None:intergenic 45.0%
GCGAGGTCAAGAATTCTGTT+AGG + chr5.4:7287464-7287483 MS.gene015375:CDS 45.0%
GGAAGCTGTGGATATGGAAT+TGG + chr5.4:7285824-7285843 MS.gene015375:CDS 45.0%
GTACCATCAGCAGAACCAAA+CGG - chr5.4:7285432-7285451 None:intergenic 45.0%
GTCTCATCTCATCAAGTGGA+TGG + chr5.4:7285753-7285772 MS.gene015375:CDS 45.0%
TCCAGAAGGGATGGAATTCA+AGG - chr5.4:7288070-7288089 None:intergenic 45.0%
TCCTTGAATTCCATCCCTTC+TGG + chr5.4:7288066-7288085 MS.gene015375:CDS 45.0%
TCGTAAGTCAGCTCTTGCAA+GGG - chr5.4:7288423-7288442 None:intergenic 45.0%
TCTGTACCACCAATGGATGT+TGG - chr5.4:7286707-7286726 None:intergenic 45.0%
TGATAGTCCCAACGACGAAA+AGG + chr5.4:7285506-7285525 MS.gene015375:CDS 45.0%
TGATGTTCCCTCGACCTTAA+CGG - chr5.4:7286555-7286574 None:intergenic 45.0%
TGGTTCCAGTGCTTGTATGA+AGG + chr5.4:7286226-7286245 MS.gene015375:CDS 45.0%
TGTGGTCTCATCTCATCAAG+TGG + chr5.4:7285749-7285768 MS.gene015375:CDS 45.0%
TTCCAGTGCTTGTATGAAGG+AGG + chr5.4:7286229-7286248 MS.gene015375:CDS 45.0%
TTCCGACGCTTAAACTTAGG+CGG - chr5.4:7285372-7285391 None:intergenic 45.0%
TTGATATATACAGGGCAGGG+TGG + chr5.4:7287367-7287386 MS.gene015375:CDS 45.0%
TTTGAAGAAGGAGGATCCTG+TGG + chr5.4:7285599-7285618 MS.gene015375:CDS 45.0%
! AAAACTGACATTGGTGGGCA+TGG + chr5.4:7285935-7285954 MS.gene015375:CDS 45.0%
! AAAAGTGGAATTGGTGGGCA+TGG + chr5.4:7285803-7285822 MS.gene015375:CDS 45.0%
! ACTAGTATTGTTGCTTCGGG+GGG + chr5.4:7287313-7287332 MS.gene015375:CDS 45.0%
! ATTTTTATGCCCACCTGGAC+AGG + chr5.4:7286750-7286769 MS.gene015375:CDS 45.0%
! CACTTTTGCAGGTTCATCGT+TGG - chr5.4:7285658-7285677 None:intergenic 45.0%
! CGTGATTTTCCGGAAGAATG+TGG + chr5.4:7285405-7285424 MS.gene015375:CDS 45.0%
! GATTTAGGTGGTGGTGATTC+GGG + chr5.4:7285477-7285496 MS.gene015375:CDS 45.0%
! GGGAATTTTCTCTTTCCCGT+AGG - chr5.4:7287713-7287732 None:intergenic 45.0%
! GTTCTGTGGAATGTACTGGT+AGG + chr5.4:7288511-7288530 MS.gene015375:CDS 45.0%
! TGAGGATCCTTTTCGTCGTT+GGG - chr5.4:7285516-7285535 None:intergenic 45.0%
! TGTGGTTCTGTGGAATGTAC+TGG + chr5.4:7288507-7288526 MS.gene015375:CDS 45.0%
! TTGAGGATCCTTTTCGTCGT+TGG - chr5.4:7285517-7285536 None:intergenic 45.0%
!! AAAAGTGTCCCAAAACCACG+TGG + chr5.4:7286926-7286945 MS.gene015375:CDS 45.0%
!! ACGAGTGTTGAGGTTAAGAG+TGG + chr5.4:7285450-7285469 MS.gene015375:CDS 45.0%
!!! AGTTTTAGACCTGTCCAGGT+GGG - chr5.4:7286762-7286781 None:intergenic 45.0%
!!! GCTGCAACTTTTTTACGAGG+AGG - chr5.4:7286272-7286291 None:intergenic 45.0%
ACTATCGATGCCGCTCAGTT+TGG + chr5.4:7288276-7288295 MS.gene015375:CDS 50.0%
AGAGATTGGGGGAGCAACTA+TGG - chr5.4:7288323-7288342 None:intergenic 50.0%
AGCCTCCTTCATACAAGCAC+TGG - chr5.4:7286234-7286253 None:intergenic 50.0%
AGGGGGGTTCTCTTCATCTA+TGG - chr5.4:7287752-7287771 None:intergenic 50.0%
AGTTCCTTCCAAGCAAGCTC+TGG - chr5.4:7287634-7287653 None:intergenic 50.0%
CAGCCAGGATGAGTGTCTAA+AGG + chr5.4:7286337-7286356 MS.gene015375:CDS 50.0%
CATGAACACCGTTAAGGTCG+AGG + chr5.4:7286544-7286563 MS.gene015375:CDS 50.0%
CATGAGGAACCCTGTTGTCA+TGG - chr5.4:7288371-7288390 None:intergenic 50.0%
CCAAACGGTCCACATTCTTC+CGG - chr5.4:7285417-7285436 None:intergenic 50.0%
CCCCACATTACCAAACTGAG+CGG - chr5.4:7288289-7288308 None:intergenic 50.0%
CCTGTCATCTGTACCACCAA+TGG - chr5.4:7286714-7286733 None:intergenic 50.0%
GATCATGGGATCAGTTCCTG+GGG + chr5.4:7287180-7287199 MS.gene015375:CDS 50.0%
GCATTGCGTCCACATAAACG+TGG - chr5.4:7286308-7286327 None:intergenic 50.0%
GCGAAGTCAGAATGTCCTTG+GGG + chr5.4:7286653-7286672 MS.gene015375:CDS 50.0%
GCTCCTTTAGACACTCATCC+TGG - chr5.4:7286343-7286362 None:intergenic 50.0%
GGAGACTTTGGATGCGGAAT+TGG + chr5.4:7285956-7285975 MS.gene015375:CDS 50.0%
GGCGAAGTCAGAATGTCCTT+GGG + chr5.4:7286652-7286671 MS.gene015375:CDS 50.0%
GGGAAGCCAGTGATGGTAAA+TGG + chr5.4:7285327-7285346 MS.gene015375:CDS 50.0%
GGTGGTACAGATGACAGGAA+GGG + chr5.4:7286716-7286735 MS.gene015375:CDS 50.0%
GTTTCGCTTGCGAAGAAAGC+CGG + chr5.4:7287603-7287622 MS.gene015375:CDS 50.0%
TAAGTCAGCTCTTGCAAGGG+AGG - chr5.4:7288420-7288439 None:intergenic 50.0%
TACTGAGATGAGATTGGCGC+TGG + chr5.4:7286493-7286512 MS.gene015375:CDS 50.0%
TCAGTTCCTGGGGTTGAAGT+TGG + chr5.4:7287190-7287209 MS.gene015375:CDS 50.0%
TCATCACCAACTTCAACCCC+AGG - chr5.4:7287199-7287218 None:intergenic 50.0%
TGGAGAGGTTCTTGAGGACA+AGG + chr5.4:7288110-7288129 MS.gene015375:CDS 50.0%
TGGCGAAGTCAGAATGTCCT+TGG + chr5.4:7286651-7286670 MS.gene015375:CDS 50.0%
TGGTCATGAGAGTGACTCAG+TGG + chr5.4:7286988-7287007 MS.gene015375:CDS 50.0%
TGGTGGTACAGATGACAGGA+AGG + chr5.4:7286715-7286734 MS.gene015375:CDS 50.0%
TTTCGCTTGCGAAGAAAGCC+GGG + chr5.4:7287604-7287623 MS.gene015375:CDS 50.0%
! ATTGGTGGGCATGGAGACTT+TGG + chr5.4:7285944-7285963 MS.gene015375:CDS 50.0%
! ATTGGTGGGCGTAGAAGCTA+TGG + chr5.4:7285680-7285699 MS.gene015375:CDS 50.0%
! CCATTGGTGGTACAGATGAC+AGG + chr5.4:7286711-7286730 MS.gene015375:CDS 50.0%
! GGCGCTGGATAATCATCATC+AGG + chr5.4:7286508-7286527 MS.gene015375:CDS 50.0%
! TACACCCCATCCCATTGACT+TGG - chr5.4:7288043-7288062 None:intergenic 50.0%
! TCAACCAGAGCTTGCTTGGA+AGG + chr5.4:7287627-7287646 MS.gene015375:CDS 50.0%
! TGCTGATGGTACGAGTGTTG+AGG + chr5.4:7285440-7285459 MS.gene015375:CDS 50.0%
!! AAATGACGGACCTGCAGAAC+TGG + chr5.4:7286052-7286071 MS.gene015375:CDS 50.0%
!! AGAACTGGCATTGGTCGGTA+TGG + chr5.4:7286067-7286086 MS.gene015375:CDS 50.0%
!! CCCACCAATTCCACTTTTGC+AGG - chr5.4:7285669-7285688 None:intergenic 50.0%
!! CCGCTCAGTTTGGTAATGTG+GGG + chr5.4:7288286-7288305 MS.gene015375:CDS 50.0%
!! GCCGCTCAGTTTGGTAATGT+GGG + chr5.4:7288285-7288304 MS.gene015375:CDS 50.0%
!! GTTGGAGGGCACTTGCATTT+AGG - chr5.4:7287964-7287983 None:intergenic 50.0%
!! TGCCGCTCAGTTTGGTAATG+TGG + chr5.4:7288284-7288303 MS.gene015375:CDS 50.0%
!!! CAGTTTTAGACCTGTCCAGG+TGG - chr5.4:7286763-7286782 None:intergenic 50.0%
!!! TCGCAGTTTTAGACCTGTCC+AGG - chr5.4:7286766-7286785 None:intergenic 50.0%
ACACTCATCCTGGCTGAGAC+GGG - chr5.4:7286333-7286352 None:intergenic 55.0%
ATGAGAGTGACTCAGTGGCC+CGG + chr5.4:7286993-7287012 MS.gene015375:CDS 55.0%
CACCCTGAATCTGGCGATGA+AGG - chr5.4:7287255-7287274 None:intergenic 55.0%
CAGTGGCCCGGAATAAAGTG+AGG + chr5.4:7287005-7287024 MS.gene015375:CDS 55.0%
CCAGGCAGGAAAGTAGTGCT+AGG + chr5.4:7286623-7286642 MS.gene015375:CDS 55.0%
CCGGAAGAATGTGGACCGTT+TGG + chr5.4:7285414-7285433 MS.gene015375:CDS 55.0%
CCTAGCACTACTTTCCTGCC+TGG - chr5.4:7286626-7286645 None:intergenic 55.0%
CTTCATCGCCAGATTCAGGG+TGG + chr5.4:7287253-7287272 MS.gene015375:CDS 55.0%
GACACTCATCCTGGCTGAGA+CGG - chr5.4:7286334-7286353 None:intergenic 55.0%
GACATAGCTACCTCGCCAAC+TGG - chr5.4:7286167-7286186 None:intergenic 55.0%
GGCCCACACTCATAGACTAG+AGG - chr5.4:7287943-7287962 None:intergenic 55.0%
GGCCTTCATCGCCAGATTCA+GGG + chr5.4:7287250-7287269 MS.gene015375:CDS 55.0%
GGGCATGGAAGCTGTGGATA+TGG + chr5.4:7285818-7285837 MS.gene015375:CDS 55.0%
GGGCATGGAGACTTTGGATG+CGG + chr5.4:7285950-7285969 MS.gene015375:CDS 55.0%
GTTTGAAGGTCTCACCAGGC+AGG + chr5.4:7286609-7286628 MS.gene015375:CDS 55.0%
TGGCCTTCATCGCCAGATTC+AGG + chr5.4:7287249-7287268 MS.gene015375:CDS 55.0%
! ATTGGTGGGCATGGAAGCTG+TGG + chr5.4:7285812-7285831 MS.gene015375:CDS 55.0%
! CAAGCAAGCTCTGGTTGACC+CGG - chr5.4:7287625-7287644 None:intergenic 55.0%
!! CCTGCAGAACTGGCATTGGT+CGG + chr5.4:7286062-7286081 MS.gene015375:CDS 55.0%
!! GATACGGGGCTCTGAATCAG+CGG + chr5.4:7287489-7287508 MS.gene015375:CDS 55.0%
!! GGACCGTTTGGTTCTGCTGA+TGG + chr5.4:7285426-7285445 MS.gene015375:CDS 55.0%
CACTCATCCTGGCTGAGACG+GGG - chr5.4:7286332-7286351 None:intergenic 60.0%
CCGACCAATGCCAGTTCTGC+AGG - chr5.4:7286065-7286084 None:intergenic 60.0%
CGGACCTGCAGAACTGGCAT+TGG + chr5.4:7286058-7286077 MS.gene015375:CDS 60.0%
GGCAGGATATGGGGCCACAT+GGG + chr5.4:7287566-7287585 MS.gene015375:CDS 60.0%
TATGGGGCCACATGGGAAGC+TGG + chr5.4:7287573-7287592 MS.gene015375:CDS 60.0%
TGGCAGGATATGGGGCCACA+TGG + chr5.4:7287565-7287584 MS.gene015375:CDS 60.0%
! CGGGTCAACCAGAGCTTGCT+TGG + chr5.4:7287623-7287642 MS.gene015375:CDS 60.0%
CAATGCTCCCCGTCTCAGCC+AGG + chr5.4:7286322-7286341 MS.gene015375:CDS 65.0%
! TCAGAGGCACGGGCTCCAGT+TGG + chr5.4:7286149-7286168 MS.gene015375:CDS 65.0%
!! CGGGGCTCTGAATCAGCGGA+TGG + chr5.4:7287493-7287512 MS.gene015375:CDS 65.0%
GGCACGGGCTCCAGTTGGCG+AGG + chr5.4:7286154-7286173 MS.gene015375:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 7285273 7288542 7285273 ID=MS.gene015375
chr5.4 mRNA 7285273 7288542 7285273 ID=MS.gene015375.t1;Parent=MS.gene015375
chr5.4 exon 7285273 7288542 7285273 ID=MS.gene015375.t1.exon1;Parent=MS.gene015375.t1
chr5.4 CDS 7285273 7288542 7285273 ID=cds.MS.gene015375.t1;Parent=MS.gene015375.t1
Gene Sequence

>MS.gene015375

ATGAATTCGGAGCCATCAATGTTGGTTTGTGATGAACATTCTGAAGAAGAATTAGGGAAGCCAGTGATGGTAAATGGAGACTCAACTATTGTTGATCCGCCTAAGTTTAAGCGTCGGAAAGTTTCTGCTGTTCGTGATTTTCCGGAAGAATGTGGACCGTTTGGTTCTGCTGATGGTACGAGTGTTGAGGTTAAGAGTGGTGAAGATTTAGGTGGTGGTGATTCGGGTGAAGCTGATAGTCCCAACGACGAAAAGGATCCTCAAAATTTTGAGTTCAATGAAGATTTGTTTGTTGCAGACACTGTTGAACAAACAAGTGACTGTAGTTTGAAGAAGGAGGATCCTGTGGTCTTATCTGATCAAGTGGATGTGGGTAGTTTTGCCAACGATGAACCTGCAAAAGTGGAATTGGTGGGCGTAGAAGCTATGGATATTAGTTTTGAAACTGAAGACTGTAGCTTGAAAAAGGAAGATCCTGTGGTCTCATCTCATCAAGTGGATGGGGATATTTTGGTTAACGATGAAGCTTCAAAAGTGGAATTGGTGGGCATGGAAGCTGTGGATATGGAATTGGAAACTGAAGACTGTAGCTTGAGAAAGGAAGATCCCATGGTCTCATCTCATCAATTGGATGTGCCTATTTTGGATAATAACGAAGATACAAAACTGACATTGGTGGGCATGGAGACTTTGGATGCGGAATTGGCAACTGAAAGCTGTAGTTTGAAGAACGAAAATGCAGCGATCTTATCTTATCAAATTGATGAGTCTACTTTGGCAAATGACGGACCTGCAGAACTGGCATTGGTCGGTATGGAAACTTCAGATATGGAATTTACAACAGAAGGCTCCGTAAAACAAGATTTATCTTATATATCAGAGGCACGGGCTCCAGTTGGCGAGGTAGCTATGTCTGATAACTCAAAATCCTCGTTGTCCAATATCAATATAGGTGGTTCCAGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATCCTCCTCGTAAAAAAGTTGCAGCGTTAAGAGATTTTCCACGTTTATGTGGACGCAATGCTCCCCGTCTCAGCCAGGATGAGTGTCTAAAGGAGCTCGCTTCTTTGAAAGAAGTTGCAGCTACTGACCTACAAGAAGCAGAAAATAACAAAAGAAAGTTTGCCAACTTTGTTGAAGCTGATTTTGAAGGGAATGCAGTCAAGAAGTTGGATGTAGCTGAACCATCTACTGAGATGAGATTGGCGCTGGATAATCATCATCAGGTTAAAGCGGAAAACATGAACACCGTTAAGGTCGAGGGAACATCAGAGCTAGATATTGATTACCCAGAACTCGAAAGTAGTTTGAAGGTCTCACCAGGCAGGAAAGTAGTGCTAGGTTTGATGGCGAAGTCAGAATGTCCTTGGGGATCTGATATTTGTTCCCCCAAATTTAAACCAACATCCATTGGTGGTACAGATGACAGGAAGGGAAAGAAAGTTGATTTTTATGCCCACCTGGACAGGTCTAAAACTGCGACCAAGTCCAAAGGTGTACTAAATCATTCTGGGCACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGATGACATGGGTCAATTAGTAACACGGGAGAAGAATTCTCTAGATCCTAATGAAAATAACAAACACTTTAAAAGTGTCCCAAAACCACGTGGTTATGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTAAGTGGTCATGAGAGTGACTCAGTGGCCCGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCAAGCTGTTTGTAGAAAGCTTTTGCAGGAAGCGGAAGCAAAACCAAAGTCAAATGTGAAAGAATCAAAGAGGGTTGATTTACAAGCTTCAAAAATACTTAAGGAGAAAGGGAGCTATGTTAATGAAGGGGAGAAGATCATGGGATCAGTTCCTGGGGTTGAAGTTGGTGATGAATTTCAATACAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATATGAAGCAAAAAAACAAGGTCCTTGCAACTAGTATTGTTGCTTCGGGGGGATATGCTGATGACTTAGATAATGCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAGAAGCTTGAACGGGGCAATCTTGCTTTGAAGAATAGTAGCGAGGTCAAGAATTCTGTTAGGGTGATACGGGGCTCTGAATCAGCGGATGGAAAAAGCAAGATATATGTTTACGATGGACTCTATGAAGTTGAGTCATATTGGCAGGATATGGGGCCACATGGGAAGCTGGTTTATAAGTTTCGCTTGCGAAGAAAGCCGGGTCAACCAGAGCTTGCTTGGAAGGAACTTAAGAAATCTAAAAAGTTCAACAAAAAAAGAGAAGGTGTACGCGTTTTTGATATTTCCTACGGGAAAGAGAAAATTCCCATATGTGCTGTGAACACCATAGATGAAGAGAACCCCCCTCCATTTAAATACATAACTAAGATGATGTATCCTGATTGTTGCAATATTGTCCCTCCAAAAGGCTGTAATTGTACTAATGGATGCTCTGACCACGAGAAATGTTCTTGTGTACTCAAAAATGGGGGGGAGATTCCATTTAATCATAATGGAGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGGCCTAAATGCAAGTGCCCTCCAACCTGTTATAATAGAGTCAGCCAACTTGGCATAAATATTCAACTCGAAATTTTTAAAACCAAGTCAATGGGATGGGGTGTAAGATCCTTGAATTCCATCCCTTCTGGAAGTTTTATCTGTGAATATATTGGAGAGGTTCTTGAGGACAAGGAAGCTGAACAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACAAAAACAACAGTAATCTTTGGGATGGACTTTCGAACCTTTTGCCAGATTCGCACTTAAGTTCAAGTGAAGTAGTGAATGATGTTGGCTTCACTATCGATGCCGCTCAGTTTGGTAATGTGGGGAGATTTATTAACCATAGTTGCTCCCCCAATCTCTATGCCCAGAATGTCCTTTATGATCACCATGACAACAGGGTTCCTCATGTCATGTTATTTGCGGCTGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGATTACAATTACACGATAGATCAAGTTCGTGATTCCGATGGCAATATCAAAAAGAAATACTGCTTTTGTGGTTCTGTGGAATGTACTGGTAGGTTGTATTGA
Protein sequence

>MS.gene015375.t1

MNSEPSMLVCDEHSEEELGKPVMVNGDSTIVDPPKFKRRKVSAVRDFPEECGPFGSADGTSVEVKSGEDLGGGDSGEADSPNDEKDPQNFEFNEDLFVADTVEQTSDCSLKKEDPVVLSDQVDVGSFANDEPAKVELVGVEAMDISFETEDCSLKKEDPVVSSHQVDGDILVNDEASKVELVGMEAVDMELETEDCSLRKEDPMVSSHQLDVPILDNNEDTKLTLVGMETLDAELATESCSLKNENAAILSYQIDESTLANDGPAELALVGMETSDMEFTTEGSVKQDLSYISEARAPVGEVAMSDNSKSSLSNINIGGSSACMKEALTKRYPPRKKVAALRDFPRLCGRNAPRLSQDECLKELASLKEVAATDLQEAENNKRKFANFVEADFEGNAVKKLDVAEPSTEMRLALDNHHQVKAENMNTVKVEGTSELDIDYPELESSLKVSPGRKVVLGLMAKSECPWGSDICSPKFKPTSIGGTDDRKGKKVDFYAHLDRSKTATKSKGVLNHSGHQPLKKKRENSSSDDMGQLVTREKNSLDPNENNKHFKSVPKPRGYVNVFPLGRSNLSGHESDSVARNKVRKTLRLFQAVCRKLLQEAEAKPKSNVKESKRVDLQASKILKEKGSYVNEGEKIMGSVPGVEVGDEFQYRIELNIIGLHRQIQGGIDYMKQKNKVLATSIVASGGYADDLDNADVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGSESADGKSKIYVYDGLYEVESYWQDMGPHGKLVYKFRLRRKPGQPELAWKELKKSKKFNKKREGVRVFDISYGKEKIPICAVNTIDEENPPPFKYITKMMYPDCCNIVPPKGCNCTNGCSDHEKCSCVLKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPPTCYNRVSQLGINIQLEIFKTKSMGWGVRSLNSIPSGSFICEYIGEVLEDKEAEQRTGNDEYLFDIGNNKNNSNLWDGLSNLLPDSHLSSSEVVNDVGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHHDNRVPHVMLFAAENIPPLQELTYDYNYTIDQVRDSDGNIKKKYCFCGSVECTGRLY