Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73386.t1 | XP_003624506.2 | 97.3 | 765 | 13 | 2 | 1 | 765 | 1 | 757 | 0.00E+00 | 1307 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73386.t1 | Q8GZB6 | 65.8 | 506 | 165 | 2 | 260 | 765 | 127 | 624 | 1.9e-205 | 717.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73386.t1 | G7KXA0 | 97.3 | 765 | 13 | 2 | 1 | 765 | 1 | 757 | 0.0e+00 | 1307.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene73386.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene54619 | MS.gene73386 | PPI |
MS.gene056257 | MS.gene73386 | PPI |
MS.gene43161 | MS.gene73386 | PPI |
MS.gene23870 | MS.gene73386 | PPI |
MS.gene75371 | MS.gene73386 | PPI |
MS.gene034064 | MS.gene73386 | PPI |
MS.gene73386 | MS.gene001986 | PPI |
MS.gene054186 | MS.gene73386 | PPI |
MS.gene001986 | MS.gene73386 | PPI |
MS.gene059422 | MS.gene73386 | PPI |
MS.gene073953 | MS.gene73386 | PPI |
MS.gene09713 | MS.gene73386 | PPI |
MS.gene53578 | MS.gene73386 | PPI |
MS.gene41916 | MS.gene73386 | PPI |
MS.gene037324 | MS.gene73386 | PPI |
MS.gene022122 | MS.gene73386 | PPI |
MS.gene73386 | MS.gene015375 | PPI |
MS.gene99744 | MS.gene73386 | PPI |
MS.gene026775 | MS.gene73386 | PPI |
MS.gene034065 | MS.gene73386 | PPI |
MS.gene029242 | MS.gene73386 | PPI |
MS.gene97292 | MS.gene73386 | PPI |
MS.gene64242 | MS.gene73386 | PPI |
MS.gene026774 | MS.gene73386 | PPI |
MS.gene60223 | MS.gene73386 | PPI |
MS.gene064936 | MS.gene73386 | PPI |
MS.gene21523 | MS.gene73386 | PPI |
MS.gene75370 | MS.gene73386 | PPI |
MS.gene034066 | MS.gene73386 | PPI |
MS.gene60222 | MS.gene73386 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73386.t1 | MTR_7g084090 | 96.863 | 765 | 16 | 2 | 1 | 765 | 1 | 757 | 0.0 | 1520 |
MS.gene73386.t1 | MTR_7g084090 | 96.308 | 650 | 16 | 2 | 1 | 650 | 1 | 642 | 0.0 | 1272 |
MS.gene73386.t1 | MTR_6g061270 | 87.570 | 716 | 60 | 5 | 57 | 765 | 1 | 694 | 0.0 | 1114 |
MS.gene73386.t1 | MTR_6g061200 | 83.916 | 715 | 59 | 6 | 57 | 765 | 1 | 665 | 0.0 | 1056 |
MS.gene73386.t1 | MTR_7g052480 | 55.102 | 343 | 143 | 3 | 423 | 765 | 225 | 556 | 1.10e-128 | 395 |
MS.gene73386.t1 | MTR_5g013420 | 42.557 | 524 | 259 | 14 | 247 | 765 | 603 | 1089 | 7.22e-122 | 392 |
MS.gene73386.t1 | MTR_5g013420 | 42.366 | 524 | 260 | 14 | 247 | 765 | 603 | 1089 | 1.19e-120 | 389 |
MS.gene73386.t1 | MTR_4g010830 | 39.847 | 522 | 273 | 12 | 248 | 765 | 496 | 980 | 2.20e-113 | 367 |
MS.gene73386.t1 | MTR_4g010550 | 39.006 | 523 | 248 | 13 | 249 | 765 | 7 | 464 | 1.30e-108 | 339 |
MS.gene73386.t1 | MTR_7g088370 | 38.447 | 515 | 272 | 12 | 251 | 761 | 228 | 701 | 7.57e-99 | 321 |
MS.gene73386.t1 | MTR_8g070070 | 37.525 | 493 | 259 | 14 | 261 | 737 | 299 | 758 | 7.59e-93 | 307 |
MS.gene73386.t1 | MTR_3g011440 | 36.719 | 512 | 292 | 12 | 258 | 761 | 173 | 660 | 6.55e-92 | 301 |
MS.gene73386.t1 | MTR_8g071030 | 38.008 | 492 | 252 | 14 | 262 | 735 | 280 | 736 | 1.36e-91 | 303 |
MS.gene73386.t1 | MTR_8g070075 | 36.874 | 499 | 266 | 17 | 253 | 735 | 284 | 749 | 7.62e-91 | 301 |
MS.gene73386.t1 | MTR_1g035420 | 37.271 | 491 | 272 | 13 | 259 | 741 | 189 | 651 | 8.95e-89 | 293 |
MS.gene73386.t1 | MTR_8g042750 | 34.038 | 520 | 296 | 13 | 256 | 761 | 198 | 684 | 8.14e-86 | 286 |
MS.gene73386.t1 | MTR_6g044690 | 32.574 | 571 | 330 | 16 | 179 | 735 | 34 | 563 | 1.79e-82 | 274 |
MS.gene73386.t1 | MTR_0376s0030 | 31.911 | 586 | 324 | 20 | 172 | 735 | 29 | 561 | 1.64e-74 | 253 |
MS.gene73386.t1 | MTR_1g035400 | 34.469 | 499 | 279 | 15 | 259 | 742 | 106 | 571 | 9.36e-73 | 248 |
MS.gene73386.t1 | MTR_7g445710 | 31.407 | 519 | 251 | 14 | 265 | 765 | 112 | 543 | 7.93e-64 | 223 |
MS.gene73386.t1 | MTR_1g048950 | 31.402 | 535 | 275 | 14 | 257 | 765 | 65 | 533 | 4.01e-63 | 221 |
MS.gene73386.t1 | MTR_2g054460 | 31.474 | 502 | 262 | 16 | 241 | 735 | 37 | 463 | 3.89e-60 | 211 |
MS.gene73386.t1 | MTR_7g450730 | 30.390 | 487 | 233 | 9 | 279 | 765 | 125 | 505 | 8.83e-60 | 211 |
MS.gene73386.t1 | MTR_6g043960 | 29.651 | 516 | 281 | 17 | 241 | 735 | 27 | 481 | 2.98e-58 | 206 |
MS.gene73386.t1 | MTR_7g445530 | 30.328 | 488 | 235 | 14 | 265 | 734 | 112 | 512 | 5.24e-51 | 186 |
MS.gene73386.t1 | MTR_8g078490 | 30.030 | 333 | 165 | 12 | 465 | 765 | 957 | 1253 | 1.44e-28 | 123 |
MS.gene73386.t1 | MTR_5g018850 | 28.571 | 329 | 180 | 9 | 464 | 765 | 1207 | 1507 | 1.79e-28 | 123 |
MS.gene73386.t1 | MTR_4g132610 | 35.268 | 224 | 114 | 8 | 545 | 765 | 852 | 1047 | 2.12e-25 | 113 |
MS.gene73386.t1 | MTR_1g069570 | 28.446 | 341 | 169 | 10 | 468 | 761 | 430 | 742 | 2.47e-25 | 112 |
MS.gene73386.t1 | MTR_1g080340 | 33.333 | 213 | 118 | 8 | 553 | 763 | 394 | 584 | 4.29e-24 | 108 |
MS.gene73386.t1 | MTR_7g445600 | 37.086 | 151 | 52 | 2 | 584 | 734 | 248 | 355 | 1.03e-23 | 103 |
MS.gene73386.t1 | MTR_8g078505 | 28.333 | 300 | 158 | 10 | 464 | 736 | 248 | 517 | 1.88e-22 | 102 |
MS.gene73386.t1 | MTR_7g098390 | 29.155 | 343 | 166 | 15 | 467 | 762 | 387 | 699 | 2.26e-20 | 96.7 |
MS.gene73386.t1 | MTR_5g098680 | 34.555 | 191 | 106 | 6 | 286 | 470 | 267 | 444 | 3.15e-19 | 92.8 |
MS.gene73386.t1 | MTR_8g102580 | 33.508 | 191 | 108 | 6 | 286 | 470 | 261 | 438 | 1.73e-17 | 87.4 |
MS.gene73386.t1 | MTR_1g069570 | 26.838 | 272 | 128 | 8 | 468 | 693 | 430 | 676 | 7.67e-16 | 82.0 |
MS.gene73386.t1 | MTR_1g098370 | 28.720 | 289 | 134 | 12 | 478 | 764 | 19 | 237 | 2.59e-12 | 70.5 |
MS.gene73386.t1 | MTR_3g114910 | 34.454 | 119 | 70 | 3 | 331 | 447 | 221 | 333 | 4.35e-12 | 69.3 |
MS.gene73386.t1 | MTR_1g098000 | 29.703 | 202 | 102 | 7 | 564 | 764 | 72 | 234 | 2.06e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73386.t1 | AT5G13960 | 65.430 | 512 | 169 | 2 | 254 | 765 | 121 | 624 | 0.0 | 732 |
MS.gene73386.t1 | AT5G13960 | 65.863 | 498 | 162 | 2 | 268 | 765 | 1 | 490 | 0.0 | 712 |
MS.gene73386.t1 | AT2G35160 | 35.494 | 617 | 281 | 16 | 160 | 765 | 248 | 758 | 3.96e-108 | 347 |
MS.gene73386.t1 | AT2G35160 | 35.494 | 617 | 281 | 16 | 160 | 765 | 284 | 794 | 9.23e-108 | 347 |
MS.gene73386.t1 | AT2G35160 | 35.494 | 617 | 281 | 16 | 160 | 765 | 284 | 794 | 9.23e-108 | 347 |
MS.gene73386.t1 | AT2G35160 | 35.494 | 617 | 281 | 16 | 160 | 765 | 284 | 794 | 9.23e-108 | 347 |
MS.gene73386.t1 | AT2G35160 | 35.494 | 617 | 281 | 16 | 160 | 765 | 284 | 794 | 9.23e-108 | 347 |
MS.gene73386.t1 | AT2G22740 | 38.858 | 543 | 277 | 17 | 241 | 765 | 285 | 790 | 1.14e-106 | 344 |
MS.gene73386.t1 | AT2G22740 | 38.858 | 543 | 277 | 17 | 241 | 765 | 285 | 790 | 1.14e-106 | 344 |
MS.gene73386.t1 | AT1G73100 | 36.614 | 508 | 282 | 11 | 263 | 761 | 189 | 665 | 1.03e-93 | 306 |
MS.gene73386.t1 | AT5G04940 | 35.294 | 510 | 294 | 13 | 258 | 761 | 187 | 666 | 3.09e-90 | 297 |
MS.gene73386.t1 | AT5G04940 | 35.294 | 510 | 294 | 13 | 258 | 761 | 187 | 666 | 3.09e-90 | 297 |
MS.gene73386.t1 | AT2G33290 | 37.705 | 488 | 275 | 10 | 254 | 737 | 178 | 640 | 3.35e-90 | 297 |
MS.gene73386.t1 | AT2G33290 | 37.705 | 488 | 275 | 10 | 254 | 737 | 178 | 640 | 3.35e-90 | 297 |
MS.gene73386.t1 | AT2G33290 | 37.705 | 488 | 275 | 10 | 254 | 737 | 178 | 640 | 3.35e-90 | 297 |
MS.gene73386.t1 | AT2G33290 | 37.705 | 488 | 275 | 10 | 254 | 737 | 178 | 640 | 3.35e-90 | 297 |
MS.gene73386.t1 | AT4G13460 | 37.901 | 467 | 260 | 11 | 278 | 739 | 200 | 641 | 3.51e-90 | 297 |
MS.gene73386.t1 | AT4G13460 | 37.901 | 467 | 260 | 11 | 278 | 739 | 200 | 641 | 3.51e-90 | 297 |
MS.gene73386.t1 | AT1G17770 | 33.066 | 499 | 285 | 14 | 279 | 761 | 224 | 689 | 2.46e-69 | 241 |
MS.gene73386.t1 | AT2G24740 | 32.863 | 496 | 269 | 16 | 279 | 761 | 307 | 751 | 2.33e-59 | 215 |
MS.gene73386.t1 | AT5G47150 | 40.741 | 189 | 101 | 4 | 256 | 443 | 150 | 328 | 3.75e-32 | 128 |
MS.gene73386.t1 | AT2G23740 | 29.217 | 332 | 167 | 12 | 463 | 764 | 1081 | 1374 | 4.42e-27 | 119 |
MS.gene73386.t1 | AT2G23740 | 29.217 | 332 | 167 | 12 | 463 | 764 | 1088 | 1381 | 5.85e-27 | 118 |
MS.gene73386.t1 | AT2G23740 | 29.217 | 332 | 167 | 12 | 463 | 764 | 1088 | 1381 | 5.85e-27 | 118 |
MS.gene73386.t1 | AT2G23740 | 29.217 | 332 | 167 | 12 | 463 | 764 | 1088 | 1381 | 5.85e-27 | 118 |
MS.gene73386.t1 | AT5G47160 | 42.138 | 159 | 80 | 4 | 279 | 435 | 259 | 407 | 6.74e-27 | 114 |
MS.gene73386.t1 | AT5G47160 | 42.138 | 159 | 80 | 4 | 279 | 435 | 259 | 407 | 6.74e-27 | 114 |
MS.gene73386.t1 | AT5G47160 | 42.138 | 159 | 80 | 4 | 279 | 435 | 259 | 407 | 6.74e-27 | 114 |
MS.gene73386.t1 | AT3G04380 | 26.531 | 343 | 177 | 11 | 468 | 763 | 130 | 444 | 6.42e-23 | 103 |
MS.gene73386.t1 | AT3G04380 | 26.531 | 343 | 177 | 11 | 468 | 763 | 119 | 433 | 7.53e-23 | 103 |
MS.gene73386.t1 | AT3G04380 | 26.531 | 343 | 177 | 11 | 468 | 763 | 146 | 460 | 8.57e-23 | 103 |
MS.gene73386.t1 | AT3G04380 | 26.531 | 343 | 177 | 11 | 468 | 763 | 103 | 417 | 1.16e-22 | 102 |
MS.gene73386.t1 | AT3G04380 | 26.531 | 343 | 177 | 11 | 468 | 763 | 146 | 460 | 1.17e-22 | 102 |
MS.gene73386.t1 | AT3G04380 | 26.531 | 343 | 177 | 11 | 468 | 763 | 119 | 433 | 1.22e-22 | 102 |
MS.gene73386.t1 | AT3G03750 | 29.502 | 261 | 128 | 9 | 513 | 764 | 136 | 349 | 1.70e-21 | 97.4 |
MS.gene73386.t1 | AT1G04050 | 26.176 | 340 | 180 | 10 | 468 | 763 | 409 | 721 | 5.42e-21 | 99.0 |
MS.gene73386.t1 | AT1G04050 | 26.176 | 340 | 180 | 10 | 468 | 763 | 409 | 721 | 5.42e-21 | 99.0 |
MS.gene73386.t1 | AT1G04050 | 26.176 | 340 | 180 | 10 | 468 | 763 | 305 | 617 | 8.66e-21 | 97.8 |
MS.gene73386.t1 | AT1G57820 | 35.106 | 188 | 95 | 8 | 274 | 445 | 256 | 432 | 3.90e-19 | 92.8 |
MS.gene73386.t1 | AT1G57820 | 35.106 | 188 | 95 | 8 | 274 | 445 | 256 | 432 | 3.90e-19 | 92.8 |
MS.gene73386.t1 | AT2G23740 | 28.352 | 261 | 123 | 10 | 463 | 693 | 1088 | 1314 | 7.46e-18 | 89.4 |
MS.gene73386.t1 | AT2G23740 | 28.352 | 261 | 123 | 10 | 463 | 693 | 1088 | 1314 | 7.46e-18 | 89.4 |
MS.gene73386.t1 | AT2G05900 | 28.821 | 229 | 143 | 7 | 299 | 525 | 1 | 211 | 2.18e-17 | 84.3 |
MS.gene73386.t1 | AT1G57820 | 34.043 | 188 | 94 | 9 | 274 | 445 | 256 | 429 | 4.21e-16 | 82.8 |
MS.gene73386.t1 | AT5G39550 | 31.383 | 188 | 102 | 7 | 274 | 445 | 241 | 417 | 7.32e-16 | 82.0 |
MS.gene73386.t1 | AT1G66040 | 30.319 | 188 | 104 | 7 | 274 | 445 | 241 | 417 | 1.13e-14 | 78.2 |
MS.gene73386.t1 | AT1G66050 | 30.319 | 188 | 104 | 7 | 274 | 445 | 241 | 417 | 1.19e-14 | 78.2 |
MS.gene73386.t1 | AT1G57800 | 32.105 | 190 | 99 | 8 | 274 | 445 | 268 | 445 | 4.13e-13 | 73.6 |
MS.gene73386.t1 | AT1G57800 | 31.746 | 189 | 97 | 8 | 274 | 445 | 268 | 441 | 8.55e-13 | 72.4 |
Find 197 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCCATTCCAGCTACAAATT+TGG | 0.221314 | 7.2:+23405811 | MS.gene73386:CDS |
TTTCATAGCCACTGGTTAAA+TGG | 0.230376 | 7.2:+23402735 | MS.gene73386:CDS |
GCTGTGGCAATTGTCATTTC+AGG | 0.266549 | 7.2:+23403000 | MS.gene73386:CDS |
ATGACAATTGCCACAGCAAC+TGG | 0.289719 | 7.2:-23402994 | None:intergenic |
ACACATTGTACAAACAAATT+AGG | 0.303501 | 7.2:-23407820 | None:intergenic |
ACTTCTCTTCACACGCTTCC+TGG | 0.317730 | 7.2:-23400820 | None:intergenic |
TAAAATGTGTTACCTGTAAA+GGG | 0.331417 | 7.2:-23407906 | None:intergenic |
GCCGATTTCTTCTTCTTTGT+CGG | 0.333203 | 7.2:-23400930 | None:intergenic |
AAAAGAATTGGCAGCATTCC+AGG | 0.338846 | 7.2:+23402478 | MS.gene73386:CDS |
AGCATATGCTTCAAGTTTGC+TGG | 0.340531 | 7.2:+23407699 | MS.gene73386:CDS |
AAGAAGTTGAATTACCGTTT+TGG | 0.344471 | 7.2:-23402784 | None:intergenic |
AAGCTTCCTGCGAGCGCCTC+TGG | 0.358749 | 7.2:+23407013 | MS.gene73386:CDS |
CTGGCGCACTTTCAGAATCT+TGG | 0.360036 | 7.2:-23407735 | None:intergenic |
TGACCTCGAATCACCCTTAC+TGG | 0.360367 | 7.2:-23404511 | None:intergenic |
GAATCCTAAGGTGAAGATTA+AGG | 0.360464 | 7.2:+23400593 | MS.gene73386:CDS |
TTGAATTTGACGCTTATTAC+CGG | 0.361988 | 7.2:-23403091 | None:intergenic |
CTAACAGATGATGCAAAATA+AGG | 0.365702 | 7.2:+23402438 | MS.gene73386:intron |
CGAAGGTGAAAGAGACTATT+AGG | 0.366644 | 7.2:+23401051 | MS.gene73386:CDS |
TGCATTGATGCAGGGTCTAC+TGG | 0.368143 | 7.2:+23407763 | MS.gene73386:CDS |
TAACAAACACTATCTTCATT+TGG | 0.375589 | 7.2:+23401079 | MS.gene73386:CDS |
TTGGTTATGGCTTTCAGATC+AGG | 0.378299 | 7.2:-23402098 | None:intergenic |
ACACTATCTTCATTTGGTTC+AGG | 0.382382 | 7.2:+23401085 | MS.gene73386:CDS |
TAGTAGGGAGAGTGTGGTTA+AGG | 0.385552 | 7.2:+23400845 | MS.gene73386:CDS |
TGGGCAGAGAAGGGAATATC+TGG | 0.389774 | 7.2:+23405031 | MS.gene73386:CDS |
ATAAAATGTGTTACCTGTAA+AGG | 0.394581 | 7.2:-23407907 | None:intergenic |
GTTCTATTCTCGTGCTGAAA+TGG | 0.396061 | 7.2:+23402701 | MS.gene73386:CDS |
TTTGCACATTCACACGTGTT+TGG | 0.399670 | 7.2:-23407064 | None:intergenic |
ATTGAAACCTTCAAAAGCTT+CGG | 0.400201 | 7.2:-23400570 | None:intergenic |
GCCTACATTAACAACAAATC+AGG | 0.403074 | 7.2:+23405096 | MS.gene73386:CDS |
GGAGGTTTGGAATGAGAAAA+TGG | 0.407704 | 7.2:+23400977 | MS.gene73386:CDS |
CTATACCCTGACAAAAGAAT+TGG | 0.409301 | 7.2:+23402466 | MS.gene73386:CDS |
CTCAGGACCACAGCCACAAT+TGG | 0.413954 | 7.2:-23407242 | None:intergenic |
TTTGCAGGTTGACAGCTATT+GGG | 0.415977 | 7.2:+23405012 | MS.gene73386:intron |
ACCAAATTTGTAGCTGGAAT+GGG | 0.419060 | 7.2:-23405812 | None:intergenic |
GAACTCAATTGTAGAACTGC+TGG | 0.424793 | 7.2:+23404476 | MS.gene73386:intron |
AACGTGAGCTGATGGAGGTT+TGG | 0.428185 | 7.2:+23400964 | MS.gene73386:CDS |
AGCAACTGGGAGTTTGAGCT+TGG | 0.434619 | 7.2:-23402980 | None:intergenic |
TCCTGGGAAGAAGTCTCTTA+AGG | 0.436049 | 7.2:+23401620 | MS.gene73386:CDS |
ACCTTAAGAGACTTCTTCCC+AGG | 0.436279 | 7.2:-23401621 | None:intergenic |
AACCACAAATTCAACTTGCC+AGG | 0.440439 | 7.2:-23405860 | None:intergenic |
AAGGATGGGCTGTTAGATCC+TGG | 0.443096 | 7.2:+23407415 | MS.gene73386:CDS |
CCCCTGGCAAGTTGAATTTG+TGG | 0.443703 | 7.2:+23405858 | MS.gene73386:CDS |
CAGGAGCTGACATATGACTA+TGG | 0.448312 | 7.2:+23408276 | MS.gene73386:intron |
AATCAAGGGGCTTGGTCAAA+GGG | 0.449293 | 7.2:+23407554 | MS.gene73386:CDS |
CAATCAAGGGGCTTGGTCAA+AGG | 0.454994 | 7.2:+23407553 | MS.gene73386:CDS |
TTCACCTTAATCTTCACCTT+AGG | 0.458201 | 7.2:-23400597 | None:intergenic |
GGGATCAAAAGGTGCCAGTA+AGG | 0.458622 | 7.2:+23404497 | MS.gene73386:CDS |
AACCAAATTTGTAGCTGGAA+TGG | 0.461157 | 7.2:-23405813 | None:intergenic |
AGGCATGTATGAAGATGATC+TGG | 0.461994 | 7.2:+23403020 | MS.gene73386:CDS |
TTACAGGTTTATTTCACAAT+GGG | 0.463618 | 7.2:+23405636 | MS.gene73386:intron |
CAGTATACAAGTTTCGTCTC+AGG | 0.464923 | 7.2:+23405059 | MS.gene73386:CDS |
TTAACCACACTCTCCCTACT+AGG | 0.465703 | 7.2:-23400843 | None:intergenic |
TGTGGTTAAGGAGGTTGTTG+AGG | 0.466253 | 7.2:+23400857 | MS.gene73386:CDS |
TGTGAGTACACAGGAATACT+TGG | 0.466484 | 7.2:+23407465 | MS.gene73386:CDS |
ATTCCTGTGTACTCACAAAC+TGG | 0.467217 | 7.2:-23407459 | None:intergenic |
GTGTGAAGAGAAGTCCTAGT+AGG | 0.468290 | 7.2:+23400829 | MS.gene73386:CDS |
GAAGGAAGAGGTTGTTGTCG+AGG | 0.469554 | 7.2:+23400902 | MS.gene73386:CDS |
TTGCAAACAATCAAGGGGCT+TGG | 0.470337 | 7.2:+23407546 | MS.gene73386:CDS |
CGTAAAGTCTATACATATGA+TGG | 0.473585 | 7.2:+23404556 | MS.gene73386:CDS |
AAACAAATGGCGTGCTATTG+TGG | 0.474553 | 7.2:+23408339 | MS.gene73386:CDS |
AAGGAAGAGGTTGTTGTCGA+GGG | 0.474727 | 7.2:+23400903 | MS.gene73386:CDS |
GTAGAACTGCTGGGATCAAA+AGG | 0.476423 | 7.2:+23404486 | MS.gene73386:intron |
TTTCGTCTCAGGAGGGTTGA+AGG | 0.477074 | 7.2:+23405070 | MS.gene73386:CDS |
CGGCCAATCTTATTCCAAAA+CGG | 0.477129 | 7.2:+23402770 | MS.gene73386:CDS |
AAGAGGACTTCAATATCGTC+TGG | 0.478541 | 7.2:+23407285 | MS.gene73386:CDS |
CCCATCCTTTCTTTGCAGTA+CGG | 0.480931 | 7.2:-23407401 | None:intergenic |
TGAAGACGTGGACAGTGTAT+TGG | 0.482919 | 7.2:+23407494 | MS.gene73386:CDS |
GCGTGCTATTGTGGAGCTAC+AGG | 0.483093 | 7.2:+23408348 | MS.gene73386:CDS |
ACCTGATTTGTTGTTAATGT+AGG | 0.483738 | 7.2:-23405097 | None:intergenic |
GTGGTCCTGAGTGTGTGAAT+AGG | 0.485516 | 7.2:+23407254 | MS.gene73386:CDS |
AGGTTTCGCCGGTGAAGTCC+AGG | 0.486360 | 7.2:+23400802 | MS.gene73386:CDS |
GAAGGTTTCAATGAATCCTA+AGG | 0.487492 | 7.2:+23400581 | MS.gene73386:CDS |
AGATTGCTTGCAAACAATCA+AGG | 0.487602 | 7.2:+23407539 | MS.gene73386:CDS |
TTGATTGAAGGCATTGAGGT+TGG | 0.491065 | 7.2:+23402672 | MS.gene73386:intron |
GCAACTGGGAGTTTGAGCTT+GGG | 0.491570 | 7.2:-23402979 | None:intergenic |
AGAGAAATCCGACGAGGTTG+AGG | 0.493999 | 7.2:+23400782 | MS.gene73386:CDS |
GTCTTTGCATTTGCATCCAG+AGG | 0.498540 | 7.2:-23407029 | None:intergenic |
TGACAGCTATTGGGCAGAGA+AGG | 0.501325 | 7.2:+23405021 | MS.gene73386:CDS |
AAGTCTCTGAAGGTTGCAAA+AGG | 0.504205 | 7.2:+23406986 | MS.gene73386:intron |
GTGAAGATTAAGGTGAAATA+CGG | 0.506723 | 7.2:+23400603 | MS.gene73386:CDS |
TCAAGATCAAAAGTTGGAGC+GGG | 0.509144 | 7.2:+23403110 | MS.gene73386:CDS |
TTGAAGAGATTCAGCTTCGC+CGG | 0.509201 | 7.2:+23400736 | MS.gene73386:CDS |
TAGGGAGAGTGTGGTTAAGG+AGG | 0.509837 | 7.2:+23400848 | MS.gene73386:CDS |
TTTCCCTATGTATCTAAAGA+TGG | 0.511890 | 7.2:+23407103 | MS.gene73386:CDS |
CACTTATTTGAAGTCTCTGA+AGG | 0.512062 | 7.2:+23406976 | MS.gene73386:intron |
TGATGGGAAGGTAAAACAAA+TGG | 0.513582 | 7.2:+23408326 | MS.gene73386:CDS |
TTCAAGATCAAAAGTTGGAG+CGG | 0.513631 | 7.2:+23403109 | MS.gene73386:CDS |
TCCGTACTGCAAAGAAAGGA+TGG | 0.513656 | 7.2:+23407400 | MS.gene73386:CDS |
AGAAACAACGGAGAAGAAGA+AGG | 0.513745 | 7.2:+23400884 | MS.gene73386:CDS |
TGATGATATCACTAACGGTC+AGG | 0.516885 | 7.2:+23405781 | MS.gene73386:CDS |
TTGCATCCAGAGGCGCTCGC+AGG | 0.517133 | 7.2:-23407019 | None:intergenic |
CGTGCTGAAATGGTTGCAGT+TGG | 0.517795 | 7.2:+23402711 | MS.gene73386:CDS |
CTCGAGCCAATCGCAAATCA+TGG | 0.522922 | 7.2:-23407855 | None:intergenic |
TTTGAATGTGGTCCCAATTG+TGG | 0.523304 | 7.2:+23407229 | MS.gene73386:CDS |
GCCACCATCTTTAGATACAT+AGG | 0.523676 | 7.2:-23407107 | None:intergenic |
AACTCAATTGTAGAACTGCT+GGG | 0.525146 | 7.2:+23404477 | MS.gene73386:intron |
ACCGACAAAGAAGAAGAAAT+CGG | 0.525585 | 7.2:+23400929 | MS.gene73386:CDS |
TCATCAACCAAATTTGTAGC+TGG | 0.528022 | 7.2:-23405818 | None:intergenic |
TCAAATTCAAGATCAAAAGT+TGG | 0.528893 | 7.2:+23403104 | MS.gene73386:CDS |
CTATGCACTTGATAGTGTCT+TGG | 0.529289 | 7.2:+23408299 | MS.gene73386:CDS |
TGTGGTCCCAATTGTGGCTG+TGG | 0.531844 | 7.2:+23407235 | MS.gene73386:CDS |
ATTGTGGAGCTACAGGCTGC+AGG | 0.531984 | 7.2:+23408355 | MS.gene73386:CDS |
TCAGGACCACAGCCACAATT+GGG | 0.532355 | 7.2:-23407241 | None:intergenic |
GGCTTTCAGATCAGGTCGCT+TGG | 0.533756 | 7.2:-23402090 | None:intergenic |
TCAGATGGTTGCGCAATCGT+TGG | 0.536360 | 7.2:+23400512 | None:intergenic |
CCTGCATCAATGCAAAACTC+TGG | 0.537698 | 7.2:-23407754 | None:intergenic |
GATAGTGTCTTGGACTCTGA+TGG | 0.539422 | 7.2:+23408309 | MS.gene73386:CDS |
ACACGCTTCCTGGACTTCAC+CGG | 0.540558 | 7.2:-23400810 | None:intergenic |
GAAATTGAGAAGAGAGGTGG+CGG | 0.540940 | 7.2:+23401531 | MS.gene73386:CDS |
CACACACCATGATTTGCGAT+TGG | 0.545362 | 7.2:+23407849 | MS.gene73386:CDS |
CCACCATCTTTAGATACATA+GGG | 0.545827 | 7.2:-23407106 | None:intergenic |
TCTCTTGATTGAAGGCATTG+AGG | 0.547725 | 7.2:+23402668 | MS.gene73386:intron |
TGTACAGGAGGAGGAGGCGA+GGG | 0.548368 | 7.2:+23401491 | MS.gene73386:intron |
TACATATGATGGCTTGTACA+AGG | 0.548494 | 7.2:+23404567 | MS.gene73386:CDS |
CAGCTTCGCCGGAAAGCTGA+GGG | 0.548569 | 7.2:+23400747 | MS.gene73386:CDS |
AGGATGGGCTGTTAGATCCT+GGG | 0.549307 | 7.2:+23407416 | MS.gene73386:CDS |
CGCAGAGGAGATCGAGTTCG+AGG | 0.550863 | 7.2:+23400691 | MS.gene73386:CDS |
GATTGCTTGCAAACAATCAA+GGG | 0.551561 | 7.2:+23407540 | MS.gene73386:CDS |
TGATAAGAGCTCAACGGCGA+AGG | 0.555781 | 7.2:+23401034 | MS.gene73386:CDS |
TGATGAGAAACGTGAGCTGA+TGG | 0.558405 | 7.2:+23400956 | MS.gene73386:CDS |
TGTGAAGAGAAGTCCTAGTA+GGG | 0.559219 | 7.2:+23400830 | MS.gene73386:CDS |
ATGTATCTAAAGATGGTGGC+AGG | 0.561395 | 7.2:+23407110 | MS.gene73386:CDS |
ACCACAAATTCAACTTGCCA+GGG | 0.561590 | 7.2:-23405859 | None:intergenic |
GAAGCTGAAAGATGAATCGA+AGG | 0.565258 | 7.2:+23400632 | MS.gene73386:CDS |
ACAAATTAGGCTCACAACAA+TGG | 0.568537 | 7.2:-23407807 | None:intergenic |
GCGGGGTAATTTAGCACTCA+AGG | 0.570642 | 7.2:+23403128 | MS.gene73386:CDS |
ATTACAGGTTTATTTCACAA+TGG | 0.571455 | 7.2:+23405635 | MS.gene73386:intron |
AATGCTGAAATTGAGAAGAG+AGG | 0.574775 | 7.2:+23401525 | MS.gene73386:CDS |
CGACGAGGTTGAGGTTTCGC+CGG | 0.575414 | 7.2:+23400791 | MS.gene73386:CDS |
CAAGGTGGGCATAATCTGAC+CGG | 0.575714 | 7.2:+23403072 | MS.gene73386:CDS |
GATCTCCTCTGCGACGACAT+TGG | 0.578970 | 7.2:-23400681 | None:intergenic |
ACCAGAAGGTATAAAATCCC+AGG | 0.579277 | 7.2:-23407433 | None:intergenic |
TATACAAGTTTCGTCTCAGG+AGG | 0.580091 | 7.2:+23405062 | MS.gene73386:CDS |
ATGTACAGGAGGAGGAGGCG+AGG | 0.581181 | 7.2:+23401490 | MS.gene73386:intron |
TTGGAATGTACAGGAGGAGG+AGG | 0.583067 | 7.2:+23401485 | MS.gene73386:intron |
GACAGCTATTGGGCAGAGAA+GGG | 0.583693 | 7.2:+23405022 | MS.gene73386:CDS |
CCGTACTGCAAAGAAAGGAT+GGG | 0.585335 | 7.2:+23407401 | MS.gene73386:CDS |
GCTCAAACTCCCAGTTGCTG+TGG | 0.587054 | 7.2:+23402984 | MS.gene73386:CDS |
TGTCTTGGACTCTGATGGGA+AGG | 0.587499 | 7.2:+23408314 | MS.gene73386:CDS |
CAACTGGGAGTTTGAGCTTG+GGG | 0.587889 | 7.2:-23402978 | None:intergenic |
GATTCAAGCTAAGCAGAAAG+AGG | 0.589427 | 7.2:+23400713 | MS.gene73386:CDS |
ACCAGTGTACACAACATCCT+CGG | 0.591147 | 7.2:-23403049 | None:intergenic |
GGATCAAAAGGTGCCAGTAA+GGG | 0.593584 | 7.2:+23404498 | MS.gene73386:CDS |
TCAGCTTCGCCGGAAAGCTG+AGG | 0.594733 | 7.2:+23400746 | MS.gene73386:CDS |
GCTGCGGAAACTGAAAATGC+TGG | 0.597698 | 7.2:+23400999 | MS.gene73386:CDS |
AACGGAGAAGAAGAAGGAAG+AGG | 0.598778 | 7.2:+23400890 | MS.gene73386:CDS |
AAGTCCTAGTAGGGAGAGTG+TGG | 0.599191 | 7.2:+23400839 | MS.gene73386:CDS |
AGGAAGAGGTTGTTGTCGAG+GGG | 0.606375 | 7.2:+23400904 | MS.gene73386:CDS |
AGTACACAGGAATACTTGGT+AGG | 0.609435 | 7.2:+23407469 | MS.gene73386:CDS |
CGTATTTCTGCTGTAGACTG+AGG | 0.611269 | 7.2:-23405666 | None:intergenic |
AAAATGTGTTACCTGTAAAG+GGG | 0.612555 | 7.2:-23407905 | None:intergenic |
CCCTATGTATCTAAAGATGG+TGG | 0.617550 | 7.2:+23407106 | MS.gene73386:CDS |
AAGATTAAGGTGAAATACGG+TGG | 0.617774 | 7.2:+23400606 | MS.gene73386:CDS |
ATATGTGATGATATCACTAA+CGG | 0.618325 | 7.2:+23405776 | MS.gene73386:CDS |
ATAGTGTCTTGGACTCTGAT+GGG | 0.618534 | 7.2:+23408310 | MS.gene73386:CDS |
AGATGAATCGAAGGATGCGA+CGG | 0.619609 | 7.2:+23400641 | MS.gene73386:CDS |
GCTTCGCCGGAAAGCTGAGG+GGG | 0.621254 | 7.2:+23400749 | MS.gene73386:CDS |
GTGCCAGTAAGGGTGATTCG+AGG | 0.621922 | 7.2:+23404508 | MS.gene73386:CDS |
TTGGAATGAGAAAATGGCTG+CGG | 0.631243 | 7.2:+23400983 | MS.gene73386:CDS |
AATCAATGCCATTTAACCAG+TGG | 0.631469 | 7.2:-23402743 | None:intergenic |
AAATGTGTTACCTGTAAAGG+GGG | 0.632493 | 7.2:-23407904 | None:intergenic |
GCCGAGGATGTTGTGTACAC+TGG | 0.638983 | 7.2:+23403048 | MS.gene73386:CDS |
TGACAATTGCCACAGCAACT+GGG | 0.640679 | 7.2:-23402993 | None:intergenic |
GAAGTCCTATTCACACACTC+AGG | 0.640833 | 7.2:-23407259 | None:intergenic |
TCACAAACTGGTGCACCAGA+AGG | 0.644393 | 7.2:-23407447 | None:intergenic |
CGGCGAAACCTCAACCTCGT+CGG | 0.649190 | 7.2:-23400790 | None:intergenic |
CACAAATTCAACTTGCCAGG+GGG | 0.649975 | 7.2:-23405857 | None:intergenic |
CAAGGGGCTTGGTCAAAGGG+AGG | 0.650879 | 7.2:+23407557 | MS.gene73386:CDS |
GAAGGATGCGACGGTGACGA+CGG | 0.653424 | 7.2:+23400650 | MS.gene73386:CDS |
ATTGCTTGCAAACAATCAAG+GGG | 0.655499 | 7.2:+23407541 | MS.gene73386:CDS |
AACAACACAATCATTCGCAA+CGG | 0.656487 | 7.2:-23400547 | None:intergenic |
CAGTCTACAGCAGAAATACG+AGG | 0.656834 | 7.2:+23405669 | MS.gene73386:CDS |
GATGTTGTGTACACTGGTCA+AGG | 0.657319 | 7.2:+23403054 | MS.gene73386:CDS |
TTGTGTACACTGGTCAAGGT+GGG | 0.660354 | 7.2:+23403058 | MS.gene73386:CDS |
ACTTGGTAGGACTGAAGACG+TGG | 0.661663 | 7.2:+23407482 | MS.gene73386:CDS |
GTTGTGTACACTGGTCAAGG+TGG | 0.663096 | 7.2:+23403057 | MS.gene73386:CDS |
GGATGCGACGGTGACGACGG+AGG | 0.664620 | 7.2:+23400653 | MS.gene73386:CDS |
AAATTGAGAAGAGAGGTGGC+GGG | 0.671120 | 7.2:+23401532 | MS.gene73386:CDS |
GCTGAAATTGAGAAGAGAGG+TGG | 0.673560 | 7.2:+23401528 | MS.gene73386:CDS |
AAAGACGTTGTGTTTGAATG+TGG | 0.675624 | 7.2:+23407217 | MS.gene73386:CDS |
TGACACCAATGTCGTCGCAG+AGG | 0.677701 | 7.2:+23400676 | MS.gene73386:CDS |
CAAGATCAAAAGTTGGAGCG+GGG | 0.680987 | 7.2:+23403111 | MS.gene73386:CDS |
TGTGAATGTGCAAAGCGCAA+TGG | 0.684582 | 7.2:+23407073 | MS.gene73386:CDS |
ATACAAGTTTCGTCTCAGGA+GGG | 0.687263 | 7.2:+23405063 | MS.gene73386:CDS |
AGGACTTCAATATCGTCTGG+AGG | 0.687370 | 7.2:+23407288 | MS.gene73386:CDS |
GCGGAAACTGAAAATGCTGG+TGG | 0.695941 | 7.2:+23401002 | MS.gene73386:CDS |
ATTGAGTGATAAGAGCTCAA+CGG | 0.696173 | 7.2:+23401028 | MS.gene73386:CDS |
GCACCAGTTTGTGAGTACAC+AGG | 0.696684 | 7.2:+23407456 | MS.gene73386:CDS |
GTGAATAGGACTTCTCAAAG+AGG | 0.697957 | 7.2:+23407268 | MS.gene73386:CDS |
TGATCTGAAAGCCATAACCA+AGG | 0.704164 | 7.2:+23402100 | MS.gene73386:CDS |
CCACAAATTCAACTTGCCAG+GGG | 0.704891 | 7.2:-23405858 | None:intergenic |
AGCTTCGCCGGAAAGCTGAG+GGG | 0.705302 | 7.2:+23400748 | MS.gene73386:CDS |
TGTTGAGGAGAAAGAAACAA+CGG | 0.711458 | 7.2:+23400872 | MS.gene73386:CDS |
AGTCTACAGCAGAAATACGA+GGG | 0.715033 | 7.2:+23405670 | MS.gene73386:CDS |
AGATGATCTGGATAATGCCG+AGG | 0.724291 | 7.2:+23403032 | MS.gene73386:CDS |
TGAGAAACGTGAGCTGATGG+AGG | 0.729307 | 7.2:+23400959 | MS.gene73386:CDS |
AGCTGAAGAGAAATCCGACG+AGG | 0.742452 | 7.2:+23400776 | MS.gene73386:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 23400516 | 23408392 | 23400516 | ID=MS.gene73386 |
chr7.2 | mRNA | 23400516 | 23408392 | 23400516 | ID=MS.gene73386.t1;Parent=MS.gene73386 |
chr7.2 | exon | 23400516 | 23401106 | 23400516 | ID=MS.gene73386.t1.exon1;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23400516 | 23401106 | 23400516 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23401498 | 23401641 | 23401498 | ID=MS.gene73386.t1.exon2;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23401498 | 23401641 | 23401498 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23402056 | 23402121 | 23402056 | ID=MS.gene73386.t1.exon3;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23402056 | 23402121 | 23402056 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23402445 | 23402499 | 23402445 | ID=MS.gene73386.t1.exon4;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23402445 | 23402499 | 23402445 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23402682 | 23402791 | 23402682 | ID=MS.gene73386.t1.exon5;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23402682 | 23402791 | 23402682 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23402976 | 23403149 | 23402976 | ID=MS.gene73386.t1.exon6;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23402976 | 23403149 | 23402976 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23404490 | 23404588 | 23404490 | ID=MS.gene73386.t1.exon7;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23404490 | 23404588 | 23404490 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23405019 | 23405117 | 23405019 | ID=MS.gene73386.t1.exon8;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23405019 | 23405117 | 23405019 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23405642 | 23405691 | 23405642 | ID=MS.gene73386.t1.exon9;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23405642 | 23405691 | 23405642 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23405772 | 23405901 | 23405772 | ID=MS.gene73386.t1.exon10;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23405772 | 23405901 | 23405772 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23406989 | 23407131 | 23406989 | ID=MS.gene73386.t1.exon11;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23406989 | 23407131 | 23406989 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23407204 | 23407309 | 23407204 | ID=MS.gene73386.t1.exon12;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23407204 | 23407309 | 23407204 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23407396 | 23407578 | 23407396 | ID=MS.gene73386.t1.exon13;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23407396 | 23407578 | 23407396 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23407682 | 23407915 | 23407682 | ID=MS.gene73386.t1.exon14;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23407682 | 23407915 | 23407682 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
chr7.2 | exon | 23408279 | 23408392 | 23408279 | ID=MS.gene73386.t1.exon15;Parent=MS.gene73386.t1 |
chr7.2 | CDS | 23408279 | 23408392 | 23408279 | ID=cds.MS.gene73386.t1;Parent=MS.gene73386.t1 |
Gene Sequence |
Protein sequence |