AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034066

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034066.t1 MTR_4g010830 86.339 937 103 3 261 1174 46 980 0.0 1605
MS.gene034066.t1 MTR_4g010830 76.190 189 32 1 1 176 79 267 1.56e-79 282
MS.gene034066.t1 MTR_5g013420 71.387 1038 190 10 240 1174 56 1089 0.0 1409
MS.gene034066.t1 MTR_5g013420 47.085 223 71 4 1 176 122 344 2.10e-42 169
MS.gene034066.t1 MTR_5g013420 34.718 337 136 10 1 256 210 543 8.38e-28 122
MS.gene034066.t1 MTR_5g013420 44.915 118 43 3 23 134 100 201 5.53e-16 84.0
MS.gene034066.t1 MTR_5g013420 71.291 1038 191 10 240 1174 56 1089 0.0 1405
MS.gene034066.t1 MTR_5g013420 47.085 223 71 4 1 176 122 344 2.22e-42 169
MS.gene034066.t1 MTR_5g013420 34.718 337 136 10 1 256 210 543 8.39e-28 122
MS.gene034066.t1 MTR_5g013420 44.915 118 43 3 23 134 100 201 5.58e-16 84.0
MS.gene034066.t1 MTR_4g010550 82.222 495 52 6 685 1174 1 464 0.0 800
MS.gene034066.t1 MTR_8g042750 40.421 522 291 12 667 1171 167 685 4.56e-119 384
MS.gene034066.t1 MTR_3g011440 40.370 540 300 15 653 1173 127 663 6.83e-118 380
MS.gene034066.t1 MTR_7g445710 41.573 534 224 10 662 1174 77 543 9.02e-116 370
MS.gene034066.t1 MTR_7g084090 40.927 518 268 13 689 1174 246 757 5.58e-114 373
MS.gene034066.t1 MTR_6g061270 41.412 524 260 15 689 1174 180 694 1.23e-111 364
MS.gene034066.t1 MTR_8g070070 41.176 459 250 9 703 1143 299 755 2.29e-111 366
MS.gene034066.t1 MTR_7g088370 40.000 525 272 18 666 1171 202 702 3.44e-111 363
MS.gene034066.t1 MTR_8g070075 40.998 461 252 9 701 1143 290 748 1.05e-110 364
MS.gene034066.t1 MTR_7g450730 40.458 524 221 9 656 1174 68 505 1.57e-108 350
MS.gene034066.t1 MTR_8g071030 40.741 459 250 9 704 1143 280 735 7.27e-105 348
MS.gene034066.t1 MTR_6g061200 41.046 497 245 13 700 1174 195 665 1.11e-104 345
MS.gene034066.t1 MTR_1g048950 40.935 535 254 12 667 1174 34 533 1.66e-103 338
MS.gene034066.t1 MTR_1g035420 38.200 500 277 12 667 1143 154 644 2.78e-103 341
MS.gene034066.t1 MTR_7g445530 40.476 504 212 10 662 1144 77 513 1.31e-101 332
MS.gene034066.t1 MTR_6g044690 38.217 471 246 14 701 1143 109 562 1.05e-89 301
MS.gene034066.t1 MTR_1g035400 38.478 473 256 14 701 1148 106 568 6.58e-88 296
MS.gene034066.t1 MTR_0376s0030 36.800 500 263 19 671 1143 87 560 9.83e-85 287
MS.gene034066.t1 MTR_7g084090 39.691 388 207 11 689 1053 246 629 6.83e-75 262
MS.gene034066.t1 MTR_6g043960 34.755 469 240 14 703 1143 50 480 1.55e-74 256
MS.gene034066.t1 MTR_7g052480 41.538 325 156 8 871 1174 245 556 3.79e-68 240
MS.gene034066.t1 MTR_2g054460 33.056 481 251 12 682 1143 34 462 7.77e-66 231
MS.gene034066.t1 MTR_5g018850 36.111 324 142 10 892 1174 1208 1507 2.99e-45 179
MS.gene034066.t1 MTR_8g078490 41.629 221 100 7 960 1174 1056 1253 8.86e-42 167
MS.gene034066.t1 MTR_7g445600 50.685 146 35 1 999 1144 248 356 5.91e-41 155
MS.gene034066.t1 MTR_7g445600 35.366 164 89 3 663 826 74 220 1.20e-20 95.5
MS.gene034066.t1 MTR_4g132610 39.545 220 104 5 961 1174 851 1047 2.66e-38 156
MS.gene034066.t1 MTR_8g078505 39.352 216 101 6 959 1169 343 533 1.04e-35 144
MS.gene034066.t1 MTR_1g069570 30.606 330 159 12 894 1169 428 741 8.05e-31 131
MS.gene034066.t1 MTR_1g080340 28.869 336 164 10 894 1172 267 584 2.30e-28 122
MS.gene034066.t1 MTR_7g098390 26.471 340 170 9 888 1169 380 697 1.51e-26 117
MS.gene034066.t1 MTR_7g445810 34.848 198 100 6 663 852 91 267 1.11e-21 96.7
MS.gene034066.t1 MTR_1g069570 29.389 262 119 10 894 1102 428 676 2.66e-21 100
MS.gene034066.t1 MTR_0071s0100 33.846 195 91 7 980 1173 191 348 2.28e-20 95.1
MS.gene034066.t1 MTR_3g088625 34.694 196 84 7 984 1173 1201 1358 1.17e-18 93.2
MS.gene034066.t1 MTR_3g088625 35.938 192 87 8 984 1173 1307 1464 1.17e-18 93.2
MS.gene034066.t1 MTR_1g098370 32.663 199 88 8 979 1170 75 234 2.27e-18 90.5
MS.gene034066.t1 MTR_6g059310 30.151 199 103 6 976 1173 87 250 4.86e-18 87.4
MS.gene034066.t1 MTR_6g059310 30.151 199 103 6 976 1173 87 250 6.01e-18 87.4
MS.gene034066.t1 MTR_1g098000 32.161 199 89 8 979 1170 72 231 6.12e-18 89.0
MS.gene034066.t1 MTR_6g027690 27.426 237 136 9 939 1173 217 419 3.64e-15 79.7
MS.gene034066.t1 MTR_5g098680 33.333 153 91 3 729 873 267 416 4.35e-14 77.4
MS.gene034066.t1 MTR_1g064770 45.312 64 34 1 973 1035 27 90 1.02e-12 65.5
MS.gene034066.t1 MTR_4g010820 81.081 37 7 0 540 576 1 37 1.33e-12 65.1
MS.gene034066.t1 MTR_8g027725 33.553 152 63 5 1000 1145 806 925 3.17e-12 71.6
MS.gene034066.t1 MTR_8g027725 33.553 152 63 5 1000 1145 791 910 3.22e-12 71.6
MS.gene034066.t1 MTR_7g117355 33.548 155 65 5 1000 1148 821 943 8.33e-12 70.5
MS.gene034066.t1 MTR_6g044000 51.020 49 24 0 1095 1143 119 167 2.15e-11 64.3
MS.gene034066.t1 MTR_7g021365 27.059 170 91 5 1002 1171 906 1042 3.80e-11 68.2
MS.gene034066.t1 MTR_1g008230 33.571 140 55 4 1012 1145 903 1010 8.40e-11 67.0
MS.gene034066.t1 MTR_1g008230 33.571 140 55 4 1012 1145 625 732 8.72e-11 67.0
MS.gene034066.t1 MTR_7g055660 30.409 171 80 5 981 1145 561 698 8.78e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034066.t1 AT2G22740 61.568 523 184 8 667 1174 270 790 0.0 633
MS.gene034066.t1 AT2G22740 61.568 523 184 8 667 1174 270 790 0.0 633
MS.gene034066.t1 AT2G35160 59.302 516 176 5 666 1174 306 794 0.0 627
MS.gene034066.t1 AT2G35160 59.302 516 176 5 666 1174 306 794 0.0 627
MS.gene034066.t1 AT2G35160 59.302 516 176 5 666 1174 306 794 0.0 627
MS.gene034066.t1 AT2G35160 59.302 516 176 5 666 1174 270 758 0.0 627
MS.gene034066.t1 AT2G35160 59.302 516 176 5 666 1174 306 794 0.0 627
MS.gene034066.t1 AT5G04940 41.276 533 289 15 656 1173 146 669 1.75e-118 382
MS.gene034066.t1 AT5G04940 41.276 533 289 15 656 1173 146 669 1.75e-118 382
MS.gene034066.t1 AT5G13960 41.045 536 271 15 669 1174 104 624 4.36e-113 366
MS.gene034066.t1 AT1G73100 40.187 535 290 15 655 1173 148 668 4.35e-112 365
MS.gene034066.t1 AT5G13960 42.827 481 243 12 723 1174 13 490 3.73e-111 356
MS.gene034066.t1 AT4G13460 37.525 509 295 10 659 1148 137 641 9.27e-103 339
MS.gene034066.t1 AT4G13460 37.525 509 295 10 659 1148 137 641 9.27e-103 339
MS.gene034066.t1 AT2G33290 32.759 638 371 15 547 1144 19 638 3.17e-99 330
MS.gene034066.t1 AT2G33290 32.759 638 371 15 547 1144 19 638 3.17e-99 330
MS.gene034066.t1 AT2G33290 32.759 638 371 15 547 1144 19 638 3.17e-99 330
MS.gene034066.t1 AT2G33290 32.759 638 371 15 547 1144 19 638 3.17e-99 330
MS.gene034066.t1 AT1G17770 36.232 483 278 12 714 1173 217 692 1.45e-83 288
MS.gene034066.t1 AT2G24740 37.107 477 257 15 714 1171 300 752 5.66e-83 287
MS.gene034066.t1 AT5G47150 48.372 215 108 3 663 875 114 327 3.89e-51 184
MS.gene034066.t1 AT5G47160 40.672 268 153 4 603 868 144 407 6.48e-47 174
MS.gene034066.t1 AT5G47160 40.672 268 153 4 603 868 144 407 6.48e-47 174
MS.gene034066.t1 AT5G47160 40.672 268 153 4 603 868 144 407 6.48e-47 174
MS.gene034066.t1 AT2G23740 34.891 321 157 11 884 1173 1075 1374 1.32e-38 157
MS.gene034066.t1 AT2G23740 34.891 321 157 11 884 1173 1082 1381 1.35e-38 157
MS.gene034066.t1 AT2G23740 34.891 321 157 11 884 1173 1082 1381 1.35e-38 157
MS.gene034066.t1 AT2G23740 34.891 321 157 11 884 1173 1082 1381 1.35e-38 157
MS.gene034066.t1 AT3G04380 27.273 363 184 13 866 1172 95 433 4.01e-30 125
MS.gene034066.t1 AT3G04380 27.273 363 184 13 866 1172 122 460 4.46e-30 126
MS.gene034066.t1 AT3G04380 27.273 363 184 13 866 1172 122 460 5.44e-30 125
MS.gene034066.t1 AT3G04380 27.273 363 184 13 866 1172 95 433 5.93e-30 125
MS.gene034066.t1 AT3G04380 27.500 360 181 13 869 1172 109 444 6.71e-30 125
MS.gene034066.t1 AT3G04380 27.500 360 181 13 869 1172 82 417 8.70e-30 124
MS.gene034066.t1 AT2G23740 35.200 250 114 9 884 1102 1082 1314 1.38e-28 125
MS.gene034066.t1 AT2G23740 35.200 250 114 9 884 1102 1082 1314 1.38e-28 125
MS.gene034066.t1 AT1G04050 27.679 336 165 12 894 1172 407 721 2.64e-25 113
MS.gene034066.t1 AT1G04050 27.679 336 165 12 894 1172 407 721 2.64e-25 113
MS.gene034066.t1 AT1G04050 34.171 199 109 6 977 1172 438 617 2.84e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 373 684 3.23e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 373 684 3.23e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 373 684 3.23e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 373 684 3.23e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 396 707 3.38e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 396 707 3.38e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 416 727 3.54e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 416 727 3.54e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 393 704 3.56e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 393 704 3.56e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 393 704 3.56e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 393 704 3.56e-25 113
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 304 615 5.44e-25 112
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 324 635 5.90e-25 112
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 324 635 5.90e-25 112
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 324 635 5.90e-25 112
MS.gene034066.t1 AT5G43990 27.761 335 163 13 894 1172 324 635 5.90e-25 112
MS.gene034066.t1 AT2G05900 34.112 214 129 8 742 945 1 212 5.94e-25 107
MS.gene034066.t1 AT2G05900 41.463 82 40 2 1090 1171 236 309 1.03e-11 68.2
MS.gene034066.t1 AT3G03750 30.325 277 141 9 908 1173 114 349 6.17e-24 105
MS.gene034066.t1 AT4G30860 29.932 294 135 13 890 1173 232 464 3.38e-19 93.2
MS.gene034066.t1 AT1G76710 32.323 198 96 7 979 1173 66 228 3.68e-18 89.7
MS.gene034066.t1 AT1G76710 32.323 198 96 7 979 1173 66 228 3.68e-18 89.7
MS.gene034066.t1 AT1G76710 32.323 198 96 7 979 1173 66 228 4.38e-18 89.7
MS.gene034066.t1 AT1G76710 32.323 198 96 7 979 1173 66 228 4.58e-18 89.7
MS.gene034066.t1 AT1G77300 32.105 190 97 7 984 1173 1009 1166 2.01e-17 89.0
MS.gene034066.t1 AT1G77300 32.105 190 97 7 984 1173 1009 1166 2.22e-17 89.0
MS.gene034066.t1 AT3G03750 27.437 277 133 11 908 1173 114 333 1.34e-15 80.1
MS.gene034066.t1 AT1G57820 31.000 200 106 7 700 873 234 427 4.68e-15 80.5
MS.gene034066.t1 AT1G57820 31.000 200 106 7 700 873 234 427 4.68e-15 80.5
MS.gene034066.t1 AT1G57820 30.457 197 108 7 700 873 234 424 1.29e-14 79.0
MS.gene034066.t1 AT3G59960 30.814 172 85 6 1002 1173 112 249 9.21e-14 73.9
MS.gene034066.t1 AT3G59960 30.814 172 85 6 1002 1173 112 249 9.21e-14 73.9
MS.gene034066.t1 AT3G59960 30.814 172 85 6 1002 1173 112 249 9.21e-14 73.9
MS.gene034066.t1 AT3G59960 30.814 172 85 6 1002 1173 112 249 3.23e-13 72.8
MS.gene034066.t1 AT3G61740 35.256 156 62 6 1000 1148 838 961 7.36e-13 73.9
MS.gene034066.t1 AT3G61740 35.256 156 62 6 1000 1148 874 997 9.64e-13 73.6
MS.gene034066.t1 AT2G44150 29.379 177 81 7 1002 1173 117 254 1.01e-12 71.6
MS.gene034066.t1 AT4G27910 32.317 164 68 6 1012 1169 896 1022 1.16e-11 70.1
MS.gene034066.t1 AT1G02580 28.910 211 111 7 939 1145 485 660 2.67e-11 68.6
MS.gene034066.t1 AT5G53430 32.317 164 68 6 1012 1169 912 1038 6.40e-11 67.4

Find 246 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAATTGGATGTGCCTATTT+TGG 0.119192 4.4:+88689887 MS.gene034066:CDS
TCAATTGGATGTGCGTATTT+TGG 0.155168 4.4:+88690772 MS.gene034066:CDS
CGAAAACGATGTGCCTATTT+TGG 0.157963 4.4:+88689956 MS.gene034066:CDS
AAAGGTGTACTGAATCTTTC+TGG 0.192863 4.4:+88690419 MS.gene034066:CDS
AGTTGCAGAGTTCAGAAATT+TGG 0.201201 4.4:+88690265 MS.gene034066:CDS
TCCCGAAGGGATGGAATTTA+AGG 0.207396 4.4:-88692808 None:intergenic
GTTAAAGCCTCCTTCATAAA+AGG 0.215750 4.4:-88691073 None:intergenic
TGGCCTTCATCGTGAGATTC+AGG 0.229037 4.4:+88691993 MS.gene034066:CDS
TGAAGGAGGCTTTAACTAAA+AGG 0.238499 4.4:+88691080 MS.gene034066:CDS
GGAACCACCATTATTGATAT+TGG 0.259616 4.4:-88690192 None:intergenic
TCAAATGGATGAGTCTAATT+TGG 0.260324 4.4:+88690049 MS.gene034066:CDS
AGAACCACCATTATTGATAT+TGG 0.263303 4.4:-88691047 None:intergenic
TCAAATGGATGAGTCTAATT+TGG 0.265057 4.4:+88689755 None:intergenic
AGAATAGAGCTTAATATAAT+TGG 0.267824 4.4:+88691973 MS.gene034066:CDS
CGTTCAAGCTTCTGATCTTC+TGG 0.271706 4.4:-88692159 None:intergenic
TGCTTTCCTCACTTTATTCC+TGG 0.278411 4.4:-88691755 None:intergenic
ATATCCCCATTATGATTAAA+TGG 0.280457 4.4:-88692645 None:intergenic
GTTGAAGAGCACTTGCATTT+AGG 0.290171 4.4:-88692702 None:intergenic
TTTGGTTAACATAAATTCTA+AGG 0.293596 4.4:+88690283 MS.gene034066:CDS
ACATCGAACGTCTCCAAAAT+AGG 0.294895 4.4:-88689900 None:intergenic
TTGAGTCAGAATCTGGAAAA+AGG 0.298495 4.4:-88692962 None:intergenic
CTTGAACTTGAGTCAGAATC+TGG 0.299589 4.4:-88692969 None:intergenic
TGCAACTAGTATTGTTGCTT+CGG 0.303684 4.4:+88692053 MS.gene034066:CDS
GAGATTCCATTTAATCATAA+TGG 0.305009 4.4:+88692639 MS.gene034066:CDS
AGATTCCATTTAATCATAAT+GGG 0.307894 4.4:+88692640 MS.gene034066:CDS
TGAAGGAGACTTTAACTAAA+AGG 0.308874 4.4:+88690225 MS.gene034066:CDS
GCAACTAGTATTGTTGCTTC+GGG 0.319658 4.4:+88692054 MS.gene034066:CDS
AAAGGATGTAATTGTACTAA+TGG 0.326952 4.4:+88692570 MS.gene034066:CDS
TTAGTACAATTACATCCTTT+TGG 0.326965 4.4:-88692567 None:intergenic
ACGTCGAAAGTCTCCAAAAT+AGG 0.328102 4.4:-88689969 None:intergenic
CATCCTGAGCATAAAGATTA+GGG 0.330663 4.4:-88693073 None:intergenic
TGAAGACTGTACCTTGAATA+AGG 0.338875 4.4:+88690136 MS.gene034066:CDS
GAAAGATGAACCTGCAAAAC+TGG 0.343200 4.4:+88689779 MS.gene034066:CDS
GAGTCATGTTGGCAGGATAT+AGG 0.343797 4.4:+88692300 MS.gene034066:CDS
TCAGGTTAACATAAATTCTA+AGG 0.345206 4.4:+88691333 MS.gene034066:CDS
TGAAGACTGTACCTTGAATA+AGG 0.349122 4.4:+88689842 MS.gene034066:CDS
ATACAATGCCTTTGATATAT+AGG 0.350409 4.4:-88690978 None:intergenic
AATGAAGAGGAGAATATCTT+AGG 0.359509 4.4:+88691910 MS.gene034066:CDS
AATATTTAAAACCAATTCAA+TGG 0.365926 4.4:+88692770 MS.gene034066:CDS
GGGACAAGATTGCAACATTC+AGG 0.367368 4.4:-88692543 None:intergenic
TGAAGACTGTACCTTCAAAA+AGG 0.367420 4.4:+88690727 MS.gene034066:CDS
GAAAGATGAACCTGCAAAAC+TGG 0.377364 4.4:+88690073 MS.gene034066:CDS
CACTTCCTTCAAGGCAAGCT+CGG 0.378048 4.4:-88692376 None:intergenic
GTACACAAGAACATTTCTTA+TGG 0.378677 4.4:-88692602 None:intergenic
TACACCCCATCCCATTGAAT+TGG 0.382244 4.4:-88692781 None:intergenic
TCGTTGTCCAATATCAATAA+TGG 0.382248 4.4:+88690185 MS.gene034066:CDS
TCGTTGTCCAATATCAATAA+TGG 0.382248 4.4:+88691040 MS.gene034066:CDS
TCCTTAAATTCCATCCCTTC+GGG 0.382613 4.4:+88692807 MS.gene034066:CDS
ATCCTTAAATTCCATCCCTT+CGG 0.383185 4.4:+88692806 MS.gene034066:CDS
TGGAGAGGTTCTTGAAGAAA+AGG 0.384765 4.4:+88692851 MS.gene034066:CDS
CGTGGTCTCATCTCATCAAT+TGG 0.387251 4.4:+88690757 MS.gene034066:CDS
ATTTCTTTCTCATTTGACTT+TGG 0.389717 4.4:-88691832 None:intergenic
GACATAGCTGCCTCGCCAAC+TGG 0.392087 4.4:-88691001 None:intergenic
AATATCTTAGGATCTGTTCC+TGG 0.393469 4.4:+88691922 MS.gene034066:CDS
GTGAGGTAAAGAATTCTGTT+AGG 0.394672 4.4:+88692208 MS.gene034066:CDS
CGTGGTCCCATCTCAACAAT+TGG 0.396753 4.4:+88689872 MS.gene034066:CDS
ACATCCTGAGCATAAAGATT+AGG 0.402055 4.4:-88693074 None:intergenic
ACTATCGATGCTGCTCAGTT+TGG 0.403237 4.4:+88693017 MS.gene034066:CDS
TGCACTACTTTCCTGCCTGA+TGG 0.405042 4.4:-88690308 None:intergenic
TGAACCTGCAAAACTGGAAT+TGG 0.405520 4.4:+88690079 MS.gene034066:CDS
TGAACCTGCAAAACTGGAAT+TGG 0.409171 4.4:+88689785 MS.gene034066:CDS
AATATCAATAATGGTGGTTC+TGG 0.410264 4.4:+88691049 MS.gene034066:CDS
TCAACCCGAGCTTGCCTTGA+AGG 0.411478 4.4:+88692371 MS.gene034066:CDS
GAAAGTAGTGCAAGGTTTGA+TGG 0.422929 4.4:+88690319 MS.gene034066:CDS
AGTCATGTTGGCAGGATATA+GGG 0.423970 4.4:+88692301 MS.gene034066:CDS
TGCTGTCTTTATGATCATAA+AGG 0.425476 4.4:-88693097 None:intergenic
AGACATAGCTTCCTTATTCA+AGG 0.427202 4.4:-88690147 None:intergenic
CAGGTTTAGACCTGTCCAGC+TGG 0.427478 4.4:-88691501 None:intergenic
GCACTACTTTCCTGCCTGAT+GGG 0.430606 4.4:-88690307 None:intergenic
CCGTTATGTATTTAAATGTA+GGG 0.433528 4.4:-88692509 None:intergenic
ATTTGACTTTGGCTTTGCTT+CGG 0.434043 4.4:-88691821 None:intergenic
ATTGGCAGGTATGGAAACTT+TGG 0.436006 4.4:+88689803 MS.gene034066:CDS
AGATTTCTTCACTTCCTTCA+AGG 0.438642 4.4:-88692385 None:intergenic
CCACCTTTCAACTTGGTAGC+AGG 0.444695 4.4:-88691520 None:intergenic
CTCCCCTAATCTTTATGCTC+AGG 0.446037 4.4:+88693070 MS.gene034066:CDS
AGAAGATCAGAAGCTTGAAC+GGG 0.449548 4.4:+88692161 MS.gene034066:CDS
ATGGAAAGAAATGAAAAGAA+AGG 0.450666 4.4:+88691456 MS.gene034066:CDS
TAAAACCAATTCAATGGGAT+GGG 0.450835 4.4:+88692776 MS.gene034066:CDS
CATAACAGAGTTAGCCAACT+TGG 0.452523 4.4:+88692729 MS.gene034066:CDS
ACATAATCGTCGTCATCATC+AGG 0.455143 4.4:+88691315 MS.gene034066:CDS
CACGTGATCTTCCTTATTCA+AGG 0.455576 4.4:-88689853 None:intergenic
ATCTGTTCCTGGGGTTGAAG+TGG 0.457823 4.4:+88691933 MS.gene034066:CDS
ACTTCCTTCAAGGCAAGCTC+GGG 0.460393 4.4:-88692375 None:intergenic
AGTAGTTCAAAGGTCTCATC+AGG 0.461146 4.4:+88691397 MS.gene034066:CDS
CCAATCAATTCCACTTCTGC+AGG 0.462490 4.4:-88690674 None:intergenic
GTTTCACTTGCGAAGAATCC+CGG 0.462680 4.4:+88692347 MS.gene034066:CDS
GCTGCTCAGTTTGGTAATGT+TGG 0.462984 4.4:+88693026 MS.gene034066:CDS
TCCGTTATGTATTTAAATGT+AGG 0.463829 4.4:-88692510 None:intergenic
AGAATTCTGTTAGGGTGATA+CGG 0.471910 4.4:+88692217 MS.gene034066:CDS
ATTGGTGGGTATGGAAACTT+TGG 0.476297 4.4:+88690913 MS.gene034066:CDS
TGTGGTTCTGAGGAATGTAC+TGG 0.476338 4.4:+88693248 MS.gene034066:CDS
ATATTTAAAACCAATTCAAT+GGG 0.476354 4.4:+88692771 MS.gene034066:CDS
AGCAAGATATATGTTTATGA+TGG 0.478148 4.4:+88692264 MS.gene034066:CDS
GAATTCTGTTAGGGTGATAC+GGG 0.478791 4.4:+88692218 MS.gene034066:CDS
TTTATGATCATAAAGACAGC+AGG 0.479224 4.4:+88693099 MS.gene034066:CDS
GTTGAATATTTATGCCAAGT+TGG 0.479273 4.4:-88692743 None:intergenic
ATTGTTCAAGCTGATTCTGC+AGG 0.479884 4.4:+88691271 MS.gene034066:CDS
TGTAGTTGAGTCATGTTGGC+AGG 0.480080 4.4:+88692293 MS.gene034066:CDS
AAGGAAAGTAGTGCGAGGTT+TGG 0.482752 4.4:+88691420 MS.gene034066:CDS
ATTGGCGGGTATGGAAACTT+TGG 0.483554 4.4:+88690097 MS.gene034066:CDS
ACACTCATCCTGACTGAGAT+GGG 0.483590 4.4:-88691167 None:intergenic
AAGGCAAGCTCGGGTTGACC+CGG 0.484808 4.4:-88692366 None:intergenic
TTCAAGGTACAGTCTTCAGT+TGG 0.484891 4.4:-88689837 None:intergenic
AAGGTGTACTGAATCTTTCT+GGG 0.485799 4.4:+88690420 MS.gene034066:CDS
AAAACTGGAATTGGCGGGTA+TGG 0.485919 4.4:+88690088 MS.gene034066:CDS
AAAGATTAGGGGAGCAGCTA+TGG 0.487084 4.4:-88693061 None:intergenic
TGGAAAGAAATGAAAAGAAA+GGG 0.488150 4.4:+88691457 MS.gene034066:CDS
TCAAATGGATGAGTCTACTT+TGG 0.489113 4.4:+88690865 MS.gene034066:CDS
CTGCTCAGTTTGGTAATGTT+GGG 0.490563 4.4:+88693027 MS.gene034066:CDS
TTAAAACCAATTCAATGGGA+TGG 0.490777 4.4:+88692775 MS.gene034066:CDS
AATATCAATAATGGTGGTTC+CGG 0.492322 4.4:+88690194 MS.gene034066:CDS
CAAGTTGGCTAACTCTGTTA+TGG 0.493210 4.4:-88692728 None:intergenic
GTTAAAGTCTCCTTCATACA+AGG 0.494319 4.4:-88690218 None:intergenic
AACTAGTATTGTTGCTTCGG+GGG 0.494402 4.4:+88692056 MS.gene034066:CDS
ACCTGCAAAACTGGAATTGG+CGG 0.497845 4.4:+88690082 MS.gene034066:CDS
AAATTCTAGTTCTGCTGACA+TGG 0.499105 4.4:+88691585 MS.gene034066:CDS
ATAAATTCTAAGGTCCCATC+AGG 0.499842 4.4:+88690293 MS.gene034066:CDS
CAAATGAGAAAGAAATAAAG+AGG 0.500038 4.4:+88691839 MS.gene034066:CDS
GGCCTTCATCGTGAGATTCA+GGG 0.501183 4.4:+88691994 MS.gene034066:CDS
ATATCTTAGGATCTGTTCCT+GGG 0.504595 4.4:+88691923 MS.gene034066:CDS
TGCAATCTTGTCCCTCCAAA+AGG 0.504802 4.4:+88692552 MS.gene034066:CDS
CAGAAGATCAGAAGCTTGAA+CGG 0.504904 4.4:+88692160 MS.gene034066:CDS
GGCACATCCAATTGTTGAGA+TGG 0.505026 4.4:-88689879 None:intergenic
TAACATAAATTCTAAGGCAG+TGG 0.505663 4.4:+88691339 MS.gene034066:CDS
GACACTCATCCTGACTGAGA+TGG 0.506513 4.4:-88691168 None:intergenic
AGTGATTTCATCTCATCAAA+TGG 0.508635 4.4:+88690034 MS.gene034066:CDS
AGTGATTTCATCTCATCAAA+TGG 0.508635 4.4:+88690850 MS.gene034066:CDS
CAATGCTCCCCATCTCAGTC+AGG 0.509818 4.4:+88691159 MS.gene034066:CDS
AAAACTGACATTGGTGGGTA+TGG 0.509846 4.4:+88690904 MS.gene034066:CDS
TAGTAACAGTGGAGAAGAGT+GGG 0.510623 4.4:+88690498 MS.gene034066:CDS
TGTACTGGTAGGTTGTATTG+AGG 0.511536 4.4:+88693263 MS.gene034066:CDS
TATAGGGCCACATGGGAAGC+TGG 0.512230 4.4:+88692317 MS.gene034066:CDS
GTCTTATCTGATCAAGTGGA+TGG 0.513873 4.4:+88690629 MS.gene034066:CDS
ATTCAGTCCACCTTTCAACT+TGG 0.514330 4.4:-88691527 None:intergenic
AAGGAAGCTGAACAAAGAAC+AGG 0.514334 4.4:+88692870 MS.gene034066:CDS
AAAACTGGAATTGGCAGGTA+TGG 0.518070 4.4:+88689794 MS.gene034066:CDS
AACAACAATAATCTTTGGGA+TGG 0.522466 4.4:+88692930 MS.gene034066:CDS
TTGGCTAACTCTGTTATGGC+AGG 0.527905 4.4:-88692724 None:intergenic
ATCGTATGTCAGCTCTTGCA+AGG 0.529691 4.4:-88693162 None:intergenic
CATGCAAAACTGACATTGGT+GGG 0.530124 4.4:+88690899 MS.gene034066:CDS
CTCAAGTTCAAGTGAAGTAG+TGG 0.532681 4.4:+88692980 MS.gene034066:CDS
TTTCACTTGCGAAGAATCCC+GGG 0.534568 4.4:+88692348 MS.gene034066:CDS
TGAGGTAAAGAATTCTGTTA+GGG 0.535310 4.4:+88692209 MS.gene034066:CDS
AAAACTGCTACCAAGTCAAA+AGG 0.538164 4.4:+88690401 MS.gene034066:CDS
CAACTAGTATTGTTGCTTCG+GGG 0.538994 4.4:+88692055 MS.gene034066:CDS
ATGAGAATGACTCAGTGGCC+AGG 0.542434 4.4:+88691737 MS.gene034066:CDS
AGTCTCCTTCATACAAGGAC+CGG 0.543841 4.4:-88690213 None:intergenic
AGGTATGGAAACTTTGGATA+CGG 0.543923 4.4:+88689809 MS.gene034066:CDS
GGGTATGGAAACTTTGGATA+CGG 0.543923 4.4:+88690919 MS.gene034066:CDS
CGTTATGTATTTAAATGTAG+GGG 0.544686 4.4:-88692508 None:intergenic
CCTGCAGAAGTGGAATTGAT+TGG 0.545551 4.4:+88690674 MS.gene034066:CDS
GATACGGGGCTCTGAATCGA+TGG 0.548918 4.4:+88692233 MS.gene034066:CDS
GGGTATGGAAACTTTGGATA+CGG 0.551939 4.4:+88690103 MS.gene034066:CDS
TTTATGTAGTTGAGTCATGT+TGG 0.552455 4.4:+88692289 MS.gene034066:CDS
CACCCTGAATCTCACGATGA+AGG 0.553438 4.4:-88691996 None:intergenic
ATGGTGTTCACAGCACATAT+AGG 0.555840 4.4:-88692471 None:intergenic
AAAACCAATTCAATGGGATG+GGG 0.555969 4.4:+88692777 MS.gene034066:CDS
CTTATCTGATCAAGTGGATG+GGG 0.556245 4.4:+88690631 MS.gene034066:CDS
ATTCTAAGGTCCCATCAGGC+AGG 0.556883 4.4:+88690297 MS.gene034066:CDS
TCTGTTCCTGGGGTTGAAGT+GGG 0.556894 4.4:+88691934 MS.gene034066:CDS
AAGAAGTTCAAAACAAGAGA+AGG 0.557336 4.4:+88692408 MS.gene034066:CDS
AGGGATCTATGTTAATGAAG+AGG 0.557816 4.4:+88691897 MS.gene034066:CDS
GATAAAACTTCCCGAAGGGA+TGG 0.558649 4.4:-88692817 None:intergenic
CATGGTCTTATCTGATCAAG+TGG 0.559351 4.4:+88690625 MS.gene034066:CDS
AAGTGACTGTAGTTTGAAGA+AGG 0.559982 4.4:+88690595 MS.gene034066:CDS
TGTGTCGAAGATATTTCCTA+CGG 0.561049 4.4:+88692435 MS.gene034066:CDS
TGGTTCCGGTCCTTGTATGA+AGG 0.564664 4.4:+88690208 MS.gene034066:CDS
GCTACATCAGAATGGAAAGC+AGG 0.566431 4.4:+88690341 MS.gene034066:CDS
CCTGCAAAACTGGAATTGGC+AGG 0.567029 4.4:+88689789 MS.gene034066:CDS
CGAACATGCAAAACTGACAT+TGG 0.567199 4.4:+88690895 MS.gene034066:CDS
AAATTCTAGTTCTGATGACA+TGG 0.567262 4.4:+88690469 MS.gene034066:CDS
ACATGCAAAACTGACATTGG+TGG 0.572026 4.4:+88690898 MS.gene034066:CDS
ACTAGTATTGTTGCTTCGGG+GGG 0.573200 4.4:+88692057 MS.gene034066:CDS
CCCTACATTTAAATACATAA+CGG 0.574146 4.4:+88692509 MS.gene034066:CDS
TTCTAAGGCAGTGGTTAAAG+CGG 0.575100 4.4:+88691348 MS.gene034066:CDS
GTTTGATGGCTACATCAGAA+TGG 0.576257 4.4:+88690333 MS.gene034066:CDS
CACAGATAAAACTTCCCGAA+GGG 0.578308 4.4:-88692821 None:intergenic
GCACATCCAATTGTTGAGAT+GGG 0.578322 4.4:-88689878 None:intergenic
CCTGCAAAACTGGAATTGGC+GGG 0.580640 4.4:+88690083 MS.gene034066:CDS
CGGGGCTCTGAATCGATGGA+TGG 0.580968 4.4:+88692237 MS.gene034066:CDS
AAAACTCGAAAGTAGTTCAA+AGG 0.583508 4.4:+88691387 MS.gene034066:CDS
AGTAACAGTGGAGAAGAGTG+GGG 0.584099 4.4:+88690499 MS.gene034066:CDS
AGGCAAGCTCGGGTTGACCC+GGG 0.584536 4.4:-88692365 None:intergenic
TAACGATGAACCTGCAGAAG+TGG 0.584913 4.4:+88690664 MS.gene034066:CDS
TCTTATCTGATCAAGTGGAT+GGG 0.585927 4.4:+88690630 MS.gene034066:CDS
TCAAAGGCATTGTATCCAGT+TGG 0.588132 4.4:+88690986 MS.gene034066:CDS
TATGTCAGCTCTTGCAAGGG+AGG 0.595124 4.4:-88693158 None:intergenic
AAAAGTGTCACAAAATCACC+TGG 0.597910 4.4:+88691667 MS.gene034066:CDS
CATGGGTCAATTAGTAACGT+TGG 0.598511 4.4:+88691603 MS.gene034066:CDS
TTGTTCAAGCTGATTCTGCA+GGG 0.600698 4.4:+88691272 MS.gene034066:CDS
TCATCACCCACTTCAACCCC+AGG 0.601478 4.4:-88691940 None:intergenic
GTGTCGAAGATATTTCCTAC+GGG 0.605162 4.4:+88692436 MS.gene034066:CDS
AGGTTTAGACCTGTCCAGCT+GGG 0.606178 4.4:-88691500 None:intergenic
GTTTGGCATCTATATCAGAA+TGG 0.607166 4.4:+88691437 MS.gene034066:CDS
GTTATGTATTTAAATGTAGG+GGG 0.608743 4.4:-88692507 None:intergenic
TGGCAGGATATAGGGCCACA+TGG 0.610955 4.4:+88692309 MS.gene034066:CDS
TATCTGTGAATATATTGGAG+AGG 0.613185 4.4:+88692836 MS.gene034066:CDS
CTCAAATTGCTACGACCAAG+AGG 0.613872 4.4:-88691709 None:intergenic
AAGTTCAAGTGAAGTAGTGG+AGG 0.616618 4.4:+88692983 MS.gene034066:CDS
TTTGAAGAAGGAAGATCCCA+TGG 0.617817 4.4:+88690607 MS.gene034066:CDS
GACGTGGAATTTGAGACTGA+AGG 0.618353 4.4:+88689987 MS.gene034066:CDS
AGATTTATCCTATATATCAA+AGG 0.619809 4.4:+88690970 MS.gene034066:CDS
CATGGGTCAATTAGTAACAG+TGG 0.619825 4.4:+88690487 MS.gene034066:CDS
GGCAGGATATAGGGCCACAT+GGG 0.622711 4.4:+88692310 MS.gene034066:CDS
AAACCTGCTACCAAGTTGAA+AGG 0.622864 4.4:+88691517 MS.gene034066:CDS
AATTGATGAGATGAGACCAC+GGG 0.625486 4.4:-88690755 None:intergenic
GGCATTGTATCCAGTTGGCG+AGG 0.625754 4.4:+88690991 MS.gene034066:CDS
GTTCAAAGGTCTCATCAGGA+AGG 0.627431 4.4:+88691401 MS.gene034066:CDS
GATTCCATTTAATCATAATG+GGG 0.631488 4.4:+88692641 MS.gene034066:CDS
AATTCTAGTTCTGCTGACAT+GGG 0.634337 4.4:+88691586 MS.gene034066:CDS
TCACAGATAAAACTTCCCGA+AGG 0.636421 4.4:-88692822 None:intergenic
CTTGGTCGTAGCAATTTGAG+TGG 0.636928 4.4:+88691712 MS.gene034066:CDS
GGACCACACTCATACACTAG+AGG 0.637486 4.4:-88692681 None:intergenic
CCTGCTACCAAGTTGAAAGG+TGG 0.637857 4.4:+88691520 MS.gene034066:CDS
TTGTCCAATATCAATAATGG+TGG 0.638016 4.4:+88690188 MS.gene034066:CDS
TTGTCCAATATCAATAATGG+TGG 0.638016 4.4:+88691043 MS.gene034066:CDS
ACTTGATCAGATAAGACCAT+GGG 0.641564 4.4:-88690623 None:intergenic
CACTTGATCAGATAAGACCA+TGG 0.643578 4.4:-88690624 None:intergenic
CACTCATCCTGACTGAGATG+GGG 0.644914 4.4:-88691166 None:intergenic
CAATTGATGAGATGAGACCA+CGG 0.645542 4.4:-88690756 None:intergenic
AAAACATTTACACTTGAACC+AGG 0.648167 4.4:-88691685 None:intergenic
TCGTATGTCAGCTCTTGCAA+GGG 0.649908 4.4:-88693161 None:intergenic
TTAGTAACAGTGGAGAAGAG+TGG 0.654568 4.4:+88690497 MS.gene034066:CDS
TATCTTAGGATCTGTTCCTG+GGG 0.656108 4.4:+88691924 MS.gene034066:CDS
TTATGATCATAAAGACAGCA+GGG 0.660006 4.4:+88693100 MS.gene034066:CDS
GATACAGTTCGTGATTCCGA+TGG 0.661038 4.4:+88693200 MS.gene034066:CDS
TGCTTTGAAGAACAGTAGTG+AGG 0.666121 4.4:+88692191 MS.gene034066:CDS
CTTGAATAAGGAAGATCACG+TGG 0.669404 4.4:+88689854 MS.gene034066:CDS
TCAGGCAGGAAAGTAGTGCA+AGG 0.670627 4.4:+88690311 MS.gene034066:CDS
CAGTGGCCAGGAATAAAGTG+AGG 0.677717 4.4:+88691749 MS.gene034066:CDS
AATTCTAGTTCTGATGACAT+GGG 0.681067 4.4:+88690470 MS.gene034066:CDS
GCAGCAAATAACATGATGTG+AGG 0.681849 4.4:-88693125 None:intergenic
TTGATATATACAGGGCAGGG+TGG 0.688777 4.4:+88692111 MS.gene034066:CDS
GAAGATCAGAAGCTTGAACG+GGG 0.691209 4.4:+88692162 MS.gene034066:CDS
AAGCCTCTAGTGTATGAGTG+TGG 0.691565 4.4:+88692678 MS.gene034066:CDS
GTTCTGAGGAATGTACTGGT+AGG 0.692190 4.4:+88693252 MS.gene034066:CDS
ATCCTGAGCATAAAGATTAG+GGG 0.695873 4.4:-88693072 None:intergenic
GCATTGCCTTCACATAAACG+TGG 0.714183 4.4:-88691142 None:intergenic
TCAAAATTATGAGTTGAACG+AGG 0.715366 4.4:+88690541 MS.gene034066:CDS
TCAGGAAGGAAAGTAGTGCG+AGG 0.717043 4.4:+88691415 MS.gene034066:CDS
TTATAAACCAGCTTCCCATG+TGG 0.718258 4.4:-88692324 None:intergenic
CTTCATCGTGAGATTCAGGG+TGG 0.726553 4.4:+88691997 MS.gene034066:CDS
ATTATTGATATTGGACAACG+AGG 0.738565 4.4:-88690183 None:intergenic
ATTATTGATATTGGACAACG+AGG 0.738565 4.4:-88691038 None:intergenic
AATTCTGTTAGGGTGATACG+GGG 0.749765 4.4:+88692219 MS.gene034066:CDS
TGGTCATGAGAATGACTCAG+TGG 0.759725 4.4:+88691732 MS.gene034066:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTAAAACCAATTCAA+TGG + chr4.4:88692770-88692789 MS.gene034066:CDS 15.0%
!!! ATATTTAAAACCAATTCAAT+GGG + chr4.4:88692771-88692790 MS.gene034066:CDS 15.0%
!! AAATCTTTCTATAAAAAGCT+CGG - chr4.4:88691792-88691811 None:intergenic 20.0%
!! ACAAAAACAACAATAATCTT+TGG + chr4.4:88692925-88692944 MS.gene034066:CDS 20.0%
!! AGAATAGAGCTTAATATAAT+TGG + chr4.4:88691973-88691992 MS.gene034066:CDS 20.0%
!! AGATTCCATTTAATCATAAT+GGG + chr4.4:88692640-88692659 MS.gene034066:CDS 20.0%
!! AGATTTATCCTATATATCAA+AGG + chr4.4:88690970-88690989 MS.gene034066:CDS 20.0%
!! CAAAAACAACAATAATCTTT+GGG + chr4.4:88692926-88692945 MS.gene034066:CDS 20.0%
!! TTTGGTTAACATAAATTCTA+AGG + chr4.4:88690283-88690302 MS.gene034066:CDS 20.0%
!!! AGTTTTATCTGTGAATATAT+TGG + chr4.4:88692831-88692850 MS.gene034066:CDS 20.0%
!!! TTTTCTCTTTTCTTTTTCAA+CGG - chr4.4:88690452-88690471 None:intergenic 20.0%
!!! TTTTTATAGAAAGATTTTGC+AGG + chr4.4:88691795-88691814 MS.gene034066:CDS 20.0%
! AAAGGATGTAATTGTACTAA+TGG + chr4.4:88692570-88692589 MS.gene034066:CDS 25.0%
! AGCAAGATATATGTTTATGA+TGG + chr4.4:88692264-88692283 MS.gene034066:CDS 25.0%
! ATACAATGCCTTTGATATAT+AGG - chr4.4:88690981-88691000 None:intergenic 25.0%
! ATATCCCCATTATGATTAAA+TGG - chr4.4:88692648-88692667 None:intergenic 25.0%
! ATGGAAAGAAATGAAAAGAA+AGG + chr4.4:88691456-88691475 MS.gene034066:CDS 25.0%
! ATTGATTGGCATAAAAACTA+TGG + chr4.4:88690688-88690707 MS.gene034066:CDS 25.0%
! CAAATGAGAAAGAAATAAAG+AGG + chr4.4:88691839-88691858 MS.gene034066:CDS 25.0%
! CCCTACATTTAAATACATAA+CGG + chr4.4:88692509-88692528 MS.gene034066:CDS 25.0%
! CCGTTATGTATTTAAATGTA+GGG - chr4.4:88692512-88692531 None:intergenic 25.0%
! CGTTATGTATTTAAATGTAG+GGG - chr4.4:88692511-88692530 None:intergenic 25.0%
! GAGATTCCATTTAATCATAA+TGG + chr4.4:88692639-88692658 MS.gene034066:CDS 25.0%
! GATTCCATTTAATCATAATG+GGG + chr4.4:88692641-88692660 MS.gene034066:CDS 25.0%
! GTTATGTATTTAAATGTAGG+GGG - chr4.4:88692510-88692529 None:intergenic 25.0%
! TCAGGTTAACATAAATTCTA+AGG + chr4.4:88691333-88691352 MS.gene034066:CDS 25.0%
! TCCGTTATGTATTTAAATGT+AGG - chr4.4:88692513-88692532 None:intergenic 25.0%
! TGGAAAGAAATGAAAAGAAA+GGG + chr4.4:88691457-88691476 MS.gene034066:CDS 25.0%
!! ATTTCTTTCTCATTTGACTT+TGG - chr4.4:88691835-88691854 None:intergenic 25.0%
!! TTAGTACAATTACATCCTTT+TGG - chr4.4:88692570-88692589 None:intergenic 25.0%
!!! AAGTGTTCGTTATTTTCATT+AGG - chr4.4:88691646-88691665 None:intergenic 25.0%
!!! ACTCATAATTTTGAGGAATT+AGG - chr4.4:88690535-88690554 None:intergenic 25.0%
!!! AGTGTTCGTTATTTTCATTA+GGG - chr4.4:88691645-88691664 None:intergenic 25.0%
!!! CAGATGTTTTGATATATACA+GGG + chr4.4:88692103-88692122 MS.gene034066:CDS 25.0%
!!! TATGTTTTTCAGGAAGTTTA+GGG - chr4.4:88691300-88691319 None:intergenic 25.0%
!!! TCAGATGTTTTGATATATAC+AGG + chr4.4:88692102-88692121 MS.gene034066:CDS 25.0%
!!! TTATGTTTTTCAGGAAGTTT+AGG - chr4.4:88691301-88691320 None:intergenic 25.0%
AAAACATTTACACTTGAACC+AGG - chr4.4:88691688-88691707 None:intergenic 30.0%
AAAACTCGAAAGTAGTTCAA+AGG + chr4.4:88691387-88691406 MS.gene034066:CDS 30.0%
AAGAAGTTCAAAACAAGAGA+AGG + chr4.4:88692408-88692427 MS.gene034066:CDS 30.0%
AATATCAATAATGGTGGTTC+CGG + chr4.4:88690194-88690213 MS.gene034066:CDS 30.0%
AATATCAATAATGGTGGTTC+TGG + chr4.4:88690194-88690213 MS.gene034066:CDS 30.0%
AATGAAGAGGAGAATATCTT+AGG + chr4.4:88691910-88691929 MS.gene034066:CDS 30.0%
AGAACCACCATTATTGATAT+TGG - chr4.4:88691050-88691069 None:intergenic 30.0%
AGTGATTTCATCTCATCAAA+TGG + chr4.4:88690034-88690053 MS.gene034066:CDS 30.0%
ATTATTGATATTGGACAACG+AGG - chr4.4:88690186-88690205 None:intergenic 30.0%
GTACACAAGAACATTTCTTA+TGG - chr4.4:88692605-88692624 None:intergenic 30.0%
GTTGAATATTTATGCCAAGT+TGG - chr4.4:88692746-88692765 None:intergenic 30.0%
TAAAACCAATTCAATGGGAT+GGG + chr4.4:88692776-88692795 MS.gene034066:CDS 30.0%
TATCTGTGAATATATTGGAG+AGG + chr4.4:88692836-88692855 MS.gene034066:CDS 30.0%
TCAAATGGATGAGTCTAATT+TGG + chr4.4:88690049-88690068 MS.gene034066:CDS 30.0%
TCGTTGTCCAATATCAATAA+TGG + chr4.4:88690185-88690204 MS.gene034066:CDS 30.0%
TGAAGGAGACTTTAACTAAA+AGG + chr4.4:88690225-88690244 MS.gene034066:CDS 30.0%
TGAGGTAAAGAATTCTGTTA+GGG + chr4.4:88692209-88692228 MS.gene034066:CDS 30.0%
TGCTGTCTTTATGATCATAA+AGG - chr4.4:88693100-88693119 None:intergenic 30.0%
TGGCATAAAAACTATGGATA+CGG + chr4.4:88690694-88690713 MS.gene034066:CDS 30.0%
TGTTCTTGTGTACTCAAAAA+TGG + chr4.4:88692612-88692631 MS.gene034066:CDS 30.0%
TTAAAACCAATTCAATGGGA+TGG + chr4.4:88692775-88692794 MS.gene034066:CDS 30.0%
TTATGATCATAAAGACAGCA+GGG + chr4.4:88693100-88693119 MS.gene034066:CDS 30.0%
TTGTCCAATATCAATAATGG+TGG + chr4.4:88690188-88690207 MS.gene034066:CDS 30.0%
TTTATGATCATAAAGACAGC+AGG + chr4.4:88693099-88693118 MS.gene034066:CDS 30.0%
TTTATGTAGTTGAGTCATGT+TGG + chr4.4:88692289-88692308 MS.gene034066:CDS 30.0%
! AAATTTTCAACTGAAAGCTG+TGG + chr4.4:88690809-88690828 MS.gene034066:CDS 30.0%
! AACAACAATAATCTTTGGGA+TGG + chr4.4:88692930-88692949 MS.gene034066:CDS 30.0%
! AGTGTAAATGTTTTTCCTCT+TGG + chr4.4:88691694-88691713 MS.gene034066:CDS 30.0%
! CTTCTTTTTGATATTGCCAT+CGG - chr4.4:88693219-88693238 None:intergenic 30.0%
! GATGAGTATCTTTTCGATAT+CGG + chr4.4:88692897-88692916 MS.gene034066:CDS 30.0%
! TACAATTACATCCTTTTGGA+GGG - chr4.4:88692566-88692585 None:intergenic 30.0%
! TCAAAATTATGAGTTGAACG+AGG + chr4.4:88690541-88690560 MS.gene034066:CDS 30.0%
! TCGTTCAACTCATAATTTTG+AGG - chr4.4:88690542-88690561 None:intergenic 30.0%
!! AAATTCTAGTTCTGATGACA+TGG + chr4.4:88690469-88690488 MS.gene034066:CDS 30.0%
!! AATTCTAGTTCTGATGACAT+GGG + chr4.4:88690470-88690489 MS.gene034066:CDS 30.0%
!! TAACATAAATTCTAAGGCAG+TGG + chr4.4:88691339-88691358 MS.gene034066:CDS 30.0%
!!! AAAAAGAAGTACTGCTTTTG+TGG + chr4.4:88693230-88693249 MS.gene034066:CDS 30.0%
AAAACCAATTCAATGGGATG+GGG + chr4.4:88692777-88692796 MS.gene034066:CDS 35.0%
AAAACTGCTACCAAGTCAAA+AGG + chr4.4:88690401-88690420 MS.gene034066:CDS 35.0%
AAGGTGTACTGAATCTTTCT+GGG + chr4.4:88690420-88690439 MS.gene034066:CDS 35.0%
AAGTGACTGTAGTTTGAAGA+AGG + chr4.4:88690595-88690614 MS.gene034066:CDS 35.0%
AATATCTTAGGATCTGTTCC+TGG + chr4.4:88691922-88691941 MS.gene034066:CDS 35.0%
ACATCCTGAGCATAAAGATT+AGG - chr4.4:88693077-88693096 None:intergenic 35.0%
ACTTGATCAGATAAGACCAT+GGG - chr4.4:88690626-88690645 None:intergenic 35.0%
AGAATTCTGTTAGGGTGATA+CGG + chr4.4:88692217-88692236 MS.gene034066:CDS 35.0%
AGACATAGCTTCCTTATTCA+AGG - chr4.4:88690150-88690169 None:intergenic 35.0%
AGATTTCTTCACTTCCTTCA+AGG - chr4.4:88692388-88692407 None:intergenic 35.0%
AGGGATCTATGTTAATGAAG+AGG + chr4.4:88691897-88691916 MS.gene034066:CDS 35.0%
AGGTATGGAAACTTTGGATA+CGG + chr4.4:88689809-88689828 MS.gene034066:CDS 35.0%
AGTTGCAGAGTTCAGAAATT+TGG + chr4.4:88690265-88690284 MS.gene034066:CDS 35.0%
ATATCTTAGGATCTGTTCCT+GGG + chr4.4:88691923-88691942 MS.gene034066:CDS 35.0%
ATCCTGAGCATAAAGATTAG+GGG - chr4.4:88693075-88693094 None:intergenic 35.0%
ATCCTTAAATTCCATCCCTT+CGG + chr4.4:88692806-88692825 MS.gene034066:CDS 35.0%
CATCCTGAGCATAAAGATTA+GGG - chr4.4:88693076-88693095 None:intergenic 35.0%
CTTGTGTACTCAAAAATGGA+GGG + chr4.4:88692616-88692635 MS.gene034066:CDS 35.0%
GGAACCACCATTATTGATAT+TGG - chr4.4:88690195-88690214 None:intergenic 35.0%
GTGAGGTAAAGAATTCTGTT+AGG + chr4.4:88692208-88692227 MS.gene034066:CDS 35.0%
GTTAAAGCCTCCTTCATAAA+AGG - chr4.4:88691076-88691095 None:intergenic 35.0%
GTTAAAGTCTCCTTCATACA+AGG - chr4.4:88690221-88690240 None:intergenic 35.0%
GTTTGGCATCTATATCAGAA+TGG + chr4.4:88691437-88691456 MS.gene034066:CDS 35.0%
TCAAATGGATGAGTCTACTT+TGG + chr4.4:88690865-88690884 MS.gene034066:CDS 35.0%
TCTTATCTGATCAAGTGGAT+GGG + chr4.4:88690630-88690649 MS.gene034066:CDS 35.0%
TCTTGTGTACTCAAAAATGG+AGG + chr4.4:88692615-88692634 MS.gene034066:CDS 35.0%
TGAAGACTGTACCTTCAAAA+AGG + chr4.4:88690727-88690746 MS.gene034066:CDS 35.0%
TGAAGACTGTACCTTGAATA+AGG + chr4.4:88689842-88689861 MS.gene034066:CDS 35.0%
TGTGTCGAAGATATTTCCTA+CGG + chr4.4:88692435-88692454 MS.gene034066:CDS 35.0%
TTGAGTCAGAATCTGGAAAA+AGG - chr4.4:88692965-88692984 None:intergenic 35.0%
TTGTGTACTCAAAAATGGAG+GGG + chr4.4:88692617-88692636 MS.gene034066:CDS 35.0%
! AAAGGTGTACTGAATCTTTC+TGG + chr4.4:88690419-88690438 MS.gene034066:CDS 35.0%
! ACAATTGGATGTGCCTATTT+TGG + chr4.4:88689887-88689906 MS.gene034066:CDS 35.0%
! GATTTTCCACGTTTATGTGA+AGG + chr4.4:88691136-88691155 MS.gene034066:CDS 35.0%
! GTACAATTACATCCTTTTGG+AGG - chr4.4:88692567-88692586 None:intergenic 35.0%
! TCAATTGGATGTGCGTATTT+TGG + chr4.4:88690772-88690791 MS.gene034066:CDS 35.0%
! TGAAGGAGGCTTTAACTAAA+AGG + chr4.4:88691080-88691099 MS.gene034066:CDS 35.0%
! TGACGACGATTATGTTTTTC+AGG - chr4.4:88691310-88691329 None:intergenic 35.0%
! TGCAACTAGTATTGTTGCTT+CGG + chr4.4:88692053-88692072 MS.gene034066:CDS 35.0%
!! AAAAGTGTCACAAAATCACC+TGG + chr4.4:88691667-88691686 MS.gene034066:CDS 35.0%
!! AAATTCTAGTTCTGCTGACA+TGG + chr4.4:88691585-88691604 MS.gene034066:CDS 35.0%
!! AATTCTAGTTCTGCTGACAT+GGG + chr4.4:88691586-88691605 MS.gene034066:CDS 35.0%
!! ATAAATTCTAAGGTCCCATC+AGG + chr4.4:88690293-88690312 MS.gene034066:CDS 35.0%
!! ATTCAGTACACCTTTTGACT+TGG - chr4.4:88690414-88690433 None:intergenic 35.0%
!! ATTTGACTTTGGCTTTGCTT+CGG - chr4.4:88691824-88691843 None:intergenic 35.0%
!! GTTTTGATATATACAGGGCA+GGG + chr4.4:88692108-88692127 MS.gene034066:CDS 35.0%
!!! TGTTTTGATATATACAGGGC+AGG + chr4.4:88692107-88692126 MS.gene034066:CDS 35.0%
AAAACTGGAATTGGCAGGTA+TGG + chr4.4:88689794-88689813 MS.gene034066:CDS 40.0%
AAGGAAGCTGAACAAAGAAC+AGG + chr4.4:88692870-88692889 MS.gene034066:CDS 40.0%
AAGTTCAAGTGAAGTAGTGG+AGG + chr4.4:88692983-88693002 MS.gene034066:CDS 40.0%
AATTCTGTTAGGGTGATACG+GGG + chr4.4:88692219-88692238 MS.gene034066:CDS 40.0%
AATTGATGAGATGAGACCAC+GGG - chr4.4:88690758-88690777 None:intergenic 40.0%
ACAAGATGCGAAAAAGCTCA+AGG + chr4.4:88691870-88691889 MS.gene034066:CDS 40.0%
ACATAATCGTCGTCATCATC+AGG + chr4.4:88691315-88691334 MS.gene034066:CDS 40.0%
ACATCGAACGTCTCCAAAAT+AGG - chr4.4:88689903-88689922 None:intergenic 40.0%
ACATGCAAAACTGACATTGG+TGG + chr4.4:88690898-88690917 MS.gene034066:CDS 40.0%
ACGTCGAAAGTCTCCAAAAT+AGG - chr4.4:88689972-88689991 None:intergenic 40.0%
AGAAGATCAGAAGCTTGAAC+GGG + chr4.4:88692161-88692180 MS.gene034066:CDS 40.0%
AGTAGTTCAAAGGTCTCATC+AGG + chr4.4:88691397-88691416 MS.gene034066:CDS 40.0%
AGTCATGTTGGCAGGATATA+GGG + chr4.4:88692301-88692320 MS.gene034066:CDS 40.0%
ATGGTGTTCACAGCACATAT+AGG - chr4.4:88692474-88692493 None:intergenic 40.0%
ATTCAGTCCACCTTTCAACT+TGG - chr4.4:88691530-88691549 None:intergenic 40.0%
ATTGGCAGGTATGGAAACTT+TGG + chr4.4:88689803-88689822 MS.gene034066:CDS 40.0%
CAATTGATGAGATGAGACCA+CGG - chr4.4:88690759-88690778 None:intergenic 40.0%
CACAGATAAAACTTCCCGAA+GGG - chr4.4:88692824-88692843 None:intergenic 40.0%
CACGTGATCTTCCTTATTCA+AGG - chr4.4:88689856-88689875 None:intergenic 40.0%
CACTTGATCAGATAAGACCA+TGG - chr4.4:88690627-88690646 None:intergenic 40.0%
CAGAAGATCAGAAGCTTGAA+CGG + chr4.4:88692160-88692179 MS.gene034066:CDS 40.0%
CATAACAGAGTTAGCCAACT+TGG + chr4.4:88692729-88692748 MS.gene034066:CDS 40.0%
CATGCAAAACTGACATTGGT+GGG + chr4.4:88690899-88690918 MS.gene034066:CDS 40.0%
CATGGGTCAATTAGTAACAG+TGG + chr4.4:88690487-88690506 MS.gene034066:CDS 40.0%
CATGGGTCAATTAGTAACGT+TGG + chr4.4:88691603-88691622 MS.gene034066:CDS 40.0%
CGAACATGCAAAACTGACAT+TGG + chr4.4:88690895-88690914 MS.gene034066:CDS 40.0%
CTCAAGTTCAAGTGAAGTAG+TGG + chr4.4:88692980-88692999 MS.gene034066:CDS 40.0%
CTTATCTGATCAAGTGGATG+GGG + chr4.4:88690631-88690650 MS.gene034066:CDS 40.0%
CTTGAACTTGAGTCAGAATC+TGG - chr4.4:88692972-88692991 None:intergenic 40.0%
CTTGAATAAGGAAGATCACG+TGG + chr4.4:88689854-88689873 MS.gene034066:CDS 40.0%
GAAAGATGAACCTGCAAAAC+TGG + chr4.4:88689779-88689798 MS.gene034066:CDS 40.0%
GAAAGTAGTGCAAGGTTTGA+TGG + chr4.4:88690319-88690338 MS.gene034066:CDS 40.0%
GAATTCTGTTAGGGTGATAC+GGG + chr4.4:88692218-88692237 MS.gene034066:CDS 40.0%
GCACATCCAATTGTTGAGAT+GGG - chr4.4:88689881-88689900 None:intergenic 40.0%
GCAGCAAATAACATGATGTG+AGG - chr4.4:88693128-88693147 None:intergenic 40.0%
GGGTATGGAAACTTTGGATA+CGG + chr4.4:88690103-88690122 MS.gene034066:CDS 40.0%
GTCTTATCTGATCAAGTGGA+TGG + chr4.4:88690629-88690648 MS.gene034066:CDS 40.0%
GTGTCGAAGATATTTCCTAC+GGG + chr4.4:88692436-88692455 MS.gene034066:CDS 40.0%
TAGTAACAGTGGAGAAGAGT+GGG + chr4.4:88690498-88690517 MS.gene034066:CDS 40.0%
TATCTTAGGATCTGTTCCTG+GGG + chr4.4:88691924-88691943 MS.gene034066:CDS 40.0%
TCACAGATAAAACTTCCCGA+AGG - chr4.4:88692825-88692844 None:intergenic 40.0%
TCCTTAAATTCCATCCCTTC+GGG + chr4.4:88692807-88692826 MS.gene034066:CDS 40.0%
TGAACCTGCAAAACTGGAAT+TGG + chr4.4:88689785-88689804 MS.gene034066:CDS 40.0%
TGCTTTCCTCACTTTATTCC+TGG - chr4.4:88691758-88691777 None:intergenic 40.0%
TGGAGAGGTTCTTGAAGAAA+AGG + chr4.4:88692851-88692870 MS.gene034066:CDS 40.0%
TTAGTAACAGTGGAGAAGAG+TGG + chr4.4:88690497-88690516 MS.gene034066:CDS 40.0%
TTATAAACCAGCTTCCCATG+TGG - chr4.4:88692327-88692346 None:intergenic 40.0%
TTCAAGGTACAGTCTTCAGT+TGG - chr4.4:88689840-88689859 None:intergenic 40.0%
TTTGAAGAAGGAAGATCCCA+TGG + chr4.4:88690607-88690626 MS.gene034066:CDS 40.0%
! AAAACTGACATTGGTGGGTA+TGG + chr4.4:88690904-88690923 MS.gene034066:CDS 40.0%
! AAACCTGCTACCAAGTTGAA+AGG + chr4.4:88691517-88691536 MS.gene034066:CDS 40.0%
! AACTAGTATTGTTGCTTCGG+GGG + chr4.4:88692056-88692075 MS.gene034066:CDS 40.0%
! AGGAATTTTCTCTTTCCCGT+AGG - chr4.4:88692454-88692473 None:intergenic 40.0%
! AGTAGATTTTATTGCCCAGC+TGG + chr4.4:88691486-88691505 MS.gene034066:CDS 40.0%
! ATTGGTGGGTATGGAAACTT+TGG + chr4.4:88690913-88690932 MS.gene034066:CDS 40.0%
! ATTGTTCAAGCTGATTCTGC+AGG + chr4.4:88691271-88691290 MS.gene034066:CDS 40.0%
! CAACTAGTATTGTTGCTTCG+GGG + chr4.4:88692055-88692074 MS.gene034066:CDS 40.0%
! CAAGTTGGCTAACTCTGTTA+TGG - chr4.4:88692731-88692750 None:intergenic 40.0%
! CGAAAACGATGTGCCTATTT+TGG + chr4.4:88689956-88689975 MS.gene034066:CDS 40.0%
! GCAACTAGTATTGTTGCTTC+GGG + chr4.4:88692054-88692073 MS.gene034066:CDS 40.0%
! GTTTGATGGCTACATCAGAA+TGG + chr4.4:88690333-88690352 MS.gene034066:CDS 40.0%
! TTCTGGTCCTTTTATGAAGG+AGG + chr4.4:88691066-88691085 MS.gene034066:CDS 40.0%
! TTGTTCAAGCTGATTCTGCA+GGG + chr4.4:88691272-88691291 MS.gene034066:CDS 40.0%
!! AGTTGATTTTTATGCCCAGC+TGG + chr4.4:88690370-88690389 MS.gene034066:CDS 40.0%
!! CATGGTCTTATCTGATCAAG+TGG + chr4.4:88690625-88690644 MS.gene034066:CDS 40.0%
!! CTGCTCAGTTTGGTAATGTT+GGG + chr4.4:88693027-88693046 MS.gene034066:CDS 40.0%
!! GTTGAAGAGCACTTGCATTT+AGG - chr4.4:88692705-88692724 None:intergenic 40.0%
!! TATTTTGGAGACGTTCGATG+TGG + chr4.4:88689902-88689921 MS.gene034066:CDS 40.0%
!! TATTTTGGAGACTTTCGACG+TGG + chr4.4:88689971-88689990 MS.gene034066:CDS 40.0%
!! TCAAAGGCATTGTATCCAGT+TGG + chr4.4:88690986-88691005 MS.gene034066:CDS 40.0%
!! TGCTTTGAAGAACAGTAGTG+AGG + chr4.4:88692191-88692210 MS.gene034066:CDS 40.0%
!! TTCTAAGGCAGTGGTTAAAG+CGG + chr4.4:88691348-88691367 MS.gene034066:CDS 40.0%
!!! AGTTTTAGACTTGTCCAGCT+GGG - chr4.4:88690387-88690406 None:intergenic 40.0%
!!! CTCTTTTCTTTTTCAACGGC+TGG - chr4.4:88690448-88690467 None:intergenic 40.0%
!!! TGGTTCTGGTCCTTTTATGA+AGG + chr4.4:88691063-88691082 MS.gene034066:CDS 40.0%
AAAGATTAGGGGAGCAGCTA+TGG - chr4.4:88693064-88693083 None:intergenic 45.0%
AAGCCTCTAGTGTATGAGTG+TGG + chr4.4:88692678-88692697 MS.gene034066:CDS 45.0%
AAGGAAAGTAGTGCGAGGTT+TGG + chr4.4:88691420-88691439 MS.gene034066:CDS 45.0%
ACACTCATCCTGACTGAGAT+GGG - chr4.4:88691170-88691189 None:intergenic 45.0%
ACCTGCAAAACTGGAATTGG+CGG + chr4.4:88689788-88689807 MS.gene034066:CDS 45.0%
ACTATCGATGCTGCTCAGTT+TGG + chr4.4:88693017-88693036 MS.gene034066:CDS 45.0%
AGATGCGAAAAAGCTCAAGG+AGG + chr4.4:88691873-88691892 MS.gene034066:CDS 45.0%
AGGGGGTTTCTCGTTATCTA+TGG - chr4.4:88692493-88692512 None:intergenic 45.0%
AGTAACAGTGGAGAAGAGTG+GGG + chr4.4:88690499-88690518 MS.gene034066:CDS 45.0%
AGTCTCCTTCATACAAGGAC+CGG - chr4.4:88690216-88690235 None:intergenic 45.0%
ATCGTATGTCAGCTCTTGCA+AGG - chr4.4:88693165-88693184 None:intergenic 45.0%
CCAATCAATTCCACTTCTGC+AGG - chr4.4:88690677-88690696 None:intergenic 45.0%
CCTGCAGAAGTGGAATTGAT+TGG + chr4.4:88690674-88690693 MS.gene034066:CDS 45.0%
CGAAAAAGCTCAAGGAGGAA+GGG + chr4.4:88691878-88691897 MS.gene034066:CDS 45.0%
CGTGGTCTCATCTCATCAAT+TGG + chr4.4:88690757-88690776 MS.gene034066:CDS 45.0%
CGTTCAAGCTTCTGATCTTC+TGG - chr4.4:88692162-88692181 None:intergenic 45.0%
CTCAAATTGCTACGACCAAG+AGG - chr4.4:88691712-88691731 None:intergenic 45.0%
CTCCCCTAATCTTTATGCTC+AGG + chr4.4:88693070-88693089 MS.gene034066:CDS 45.0%
CTTCAAAAAGGAAGATCCCG+TGG + chr4.4:88690739-88690758 MS.gene034066:CDS 45.0%
CTTGGTCGTAGCAATTTGAG+TGG + chr4.4:88691712-88691731 MS.gene034066:CDS 45.0%
GAAGATCAGAAGCTTGAACG+GGG + chr4.4:88692162-88692181 MS.gene034066:CDS 45.0%
GAGTCATGTTGGCAGGATAT+AGG + chr4.4:88692300-88692319 MS.gene034066:CDS 45.0%
GATAAAACTTCCCGAAGGGA+TGG - chr4.4:88692820-88692839 None:intergenic 45.0%
GATACAGTTCGTGATTCCGA+TGG + chr4.4:88693200-88693219 MS.gene034066:CDS 45.0%
GCATTGCCTTCACATAAACG+TGG - chr4.4:88691145-88691164 None:intergenic 45.0%
GCTACATCAGAATGGAAAGC+AGG + chr4.4:88690341-88690360 MS.gene034066:CDS 45.0%
GGCACATCCAATTGTTGAGA+TGG - chr4.4:88689882-88689901 None:intergenic 45.0%
GGGACAAGATTGCAACATTC+AGG - chr4.4:88692546-88692565 None:intergenic 45.0%
GTTCAAAGGTCTCATCAGGA+AGG + chr4.4:88691401-88691420 MS.gene034066:CDS 45.0%
GTTTCACTTGCGAAGAATCC+CGG + chr4.4:88692347-88692366 MS.gene034066:CDS 45.0%
TAACGATGAACCTGCAGAAG+TGG + chr4.4:88690664-88690683 MS.gene034066:CDS 45.0%
TACACCCCATCCCATTGAAT+TGG - chr4.4:88692784-88692803 None:intergenic 45.0%
TCCCGAAGGGATGGAATTTA+AGG - chr4.4:88692811-88692830 None:intergenic 45.0%
TCGTATGTCAGCTCTTGCAA+GGG - chr4.4:88693164-88693183 None:intergenic 45.0%
TGCAATCTTGTCCCTCCAAA+AGG + chr4.4:88692552-88692571 MS.gene034066:CDS 45.0%
TGGTCATGAGAATGACTCAG+TGG + chr4.4:88691732-88691751 MS.gene034066:CDS 45.0%
TGTAGTTGAGTCATGTTGGC+AGG + chr4.4:88692293-88692312 MS.gene034066:CDS 45.0%
TTGATATATACAGGGCAGGG+TGG + chr4.4:88692111-88692130 MS.gene034066:CDS 45.0%
TTGGCTAACTCTGTTATGGC+AGG - chr4.4:88692727-88692746 None:intergenic 45.0%
TTTCACTTGCGAAGAATCCC+GGG + chr4.4:88692348-88692367 MS.gene034066:CDS 45.0%
! AAAACTGGAATTGGCGGGTA+TGG + chr4.4:88690088-88690107 MS.gene034066:CDS 45.0%
! ACTAGTATTGTTGCTTCGGG+GGG + chr4.4:88692057-88692076 MS.gene034066:CDS 45.0%
! ATTGGCGGGTATGGAAACTT+TGG + chr4.4:88690097-88690116 MS.gene034066:CDS 45.0%
! ATTTTATTGCCCAGCTGGAC+AGG + chr4.4:88691491-88691510 MS.gene034066:CDS 45.0%
! CACGGGATCTTCCTTTTTGA+AGG - chr4.4:88690741-88690760 None:intergenic 45.0%
! GACGTGGAATTTGAGACTGA+AGG + chr4.4:88689987-88690006 MS.gene034066:CDS 45.0%
!! GCTGCTCAGTTTGGTAATGT+TGG + chr4.4:88693026-88693045 MS.gene034066:CDS 45.0%
!! GTACTGCTTTTGTGGTTCTG+AGG + chr4.4:88693238-88693257 MS.gene034066:CDS 45.0%
!! GTTCTGAGGAATGTACTGGT+AGG + chr4.4:88693252-88693271 MS.gene034066:CDS 45.0%
!! TGTGGTTCTGAGGAATGTAC+TGG + chr4.4:88693248-88693267 MS.gene034066:CDS 45.0%
!!! CAGTTTTAGACTTGTCCAGC+TGG - chr4.4:88690388-88690407 None:intergenic 45.0%
ACTTCCTTCAAGGCAAGCTC+GGG - chr4.4:88692378-88692397 None:intergenic 50.0%
AGGTTTAGACCTGTCCAGCT+GGG - chr4.4:88691503-88691522 None:intergenic 50.0%
ATCTGTTCCTGGGGTTGAAG+TGG + chr4.4:88691933-88691952 MS.gene034066:CDS 50.0%
ATGAGAATGACTCAGTGGCC+AGG + chr4.4:88691737-88691756 MS.gene034066:CDS 50.0%
CACCCTGAATCTCACGATGA+AGG - chr4.4:88691999-88692018 None:intergenic 50.0%
CACTCATCCTGACTGAGATG+GGG - chr4.4:88691169-88691188 None:intergenic 50.0%
CACTTCCTTCAAGGCAAGCT+CGG - chr4.4:88692379-88692398 None:intergenic 50.0%
CAGTGGCCAGGAATAAAGTG+AGG + chr4.4:88691749-88691768 MS.gene034066:CDS 50.0%
CCTGCAAAACTGGAATTGGC+AGG + chr4.4:88689789-88689808 MS.gene034066:CDS 50.0%
CCTGCAAAACTGGAATTGGC+GGG + chr4.4:88689789-88689808 MS.gene034066:CDS 50.0%
CGTGGTCCCATCTCAACAAT+TGG + chr4.4:88689872-88689891 MS.gene034066:CDS 50.0%
CTTCATCGTGAGATTCAGGG+TGG + chr4.4:88691997-88692016 MS.gene034066:CDS 50.0%
GACACTCATCCTGACTGAGA+TGG - chr4.4:88691171-88691190 None:intergenic 50.0%
GCACTACTTTCCTGCCTGAT+GGG - chr4.4:88690310-88690329 None:intergenic 50.0%
GCGAAAAAGCTCAAGGAGGA+AGG + chr4.4:88691877-88691896 MS.gene034066:CDS 50.0%
GGACCACACTCATACACTAG+AGG - chr4.4:88692684-88692703 None:intergenic 50.0%
GGCCTTCATCGTGAGATTCA+GGG + chr4.4:88691994-88692013 MS.gene034066:CDS 50.0%
TATGTCAGCTCTTGCAAGGG+AGG - chr4.4:88693161-88693180 None:intergenic 50.0%
TCAGGAAGGAAAGTAGTGCG+AGG + chr4.4:88691415-88691434 MS.gene034066:CDS 50.0%
TCAGGCAGGAAAGTAGTGCA+AGG + chr4.4:88690311-88690330 MS.gene034066:CDS 50.0%
TCTGTTCCTGGGGTTGAAGT+GGG + chr4.4:88691934-88691953 MS.gene034066:CDS 50.0%
TGCACTACTTTCCTGCCTGA+TGG - chr4.4:88690311-88690330 None:intergenic 50.0%
TGGCCTTCATCGTGAGATTC+AGG + chr4.4:88691993-88692012 MS.gene034066:CDS 50.0%
TGGTTCCGGTCCTTGTATGA+AGG + chr4.4:88690208-88690227 MS.gene034066:CDS 50.0%
! CCACCTTTCAACTTGGTAGC+AGG - chr4.4:88691523-88691542 None:intergenic 50.0%
! CCTGCCAATTCCAGTTTTGC+AGG - chr4.4:88689792-88689811 None:intergenic 50.0%
! CCTGCTACCAAGTTGAAAGG+TGG + chr4.4:88691520-88691539 MS.gene034066:CDS 50.0%
!! ATTCTAAGGTCCCATCAGGC+AGG + chr4.4:88690297-88690316 MS.gene034066:CDS 50.0%
CAATGCTCCCCATCTCAGTC+AGG + chr4.4:88691159-88691178 MS.gene034066:CDS 55.0%
CAGGTTTAGACCTGTCCAGC+TGG - chr4.4:88691504-88691523 None:intergenic 55.0%
GGCAGGATATAGGGCCACAT+GGG + chr4.4:88692310-88692329 MS.gene034066:CDS 55.0%
GGCATTGTATCCAGTTGGCG+AGG + chr4.4:88690991-88691010 MS.gene034066:CDS 55.0%
TATAGGGCCACATGGGAAGC+TGG + chr4.4:88692317-88692336 MS.gene034066:CDS 55.0%
TCAACCCGAGCTTGCCTTGA+AGG + chr4.4:88692371-88692390 MS.gene034066:CDS 55.0%
TCATCACCCACTTCAACCCC+AGG - chr4.4:88691943-88691962 None:intergenic 55.0%
TGGCAGGATATAGGGCCACA+TGG + chr4.4:88692309-88692328 MS.gene034066:CDS 55.0%
! CCCGCCAATTCCAGTTTTGC+AGG - chr4.4:88690086-88690105 None:intergenic 55.0%
!! GATACGGGGCTCTGAATCGA+TGG + chr4.4:88692233-88692252 MS.gene034066:CDS 55.0%
GACATAGCTGCCTCGCCAAC+TGG - chr4.4:88691004-88691023 None:intergenic 60.0%
!! AAGGCAAGCTCGGGTTGACC+CGG - chr4.4:88692369-88692388 None:intergenic 60.0%
!! CGGGGCTCTGAATCGATGGA+TGG + chr4.4:88692237-88692256 MS.gene034066:CDS 60.0%
GTTGCTTCGGGGGGCTATGC+TGG + chr4.4:88692066-88692085 MS.gene034066:CDS 65.0%
!! AGGCAAGCTCGGGTTGACCC+GGG - chr4.4:88692368-88692387 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 88689759 88693283 88689759 ID=MS.gene034066
chr4.4 mRNA 88689759 88693283 88689759 ID=MS.gene034066.t1;Parent=MS.gene034066
chr4.4 exon 88689759 88693283 88689759 ID=MS.gene034066.t1.exon1;Parent=MS.gene034066.t1
chr4.4 CDS 88689759 88693283 88689759 ID=cds.MS.gene034066.t1;Parent=MS.gene034066.t1
Gene Sequence

>MS.gene034066

ATGGATGAGTCTAATTTGGTGAAAGATGAACCTGCAAAACTGGAATTGGCAGGTATGGAAACTTTGGATACGGAATTTCCAACTGAAGACTGTACCTTGAATAAGGAAGATCACGTGGTCCCATCTCAACAATTGGATGTGCCTATTTTGGAGACGTTCGATGTGGAATTTGCAACTGAAAGCTGTAGTTTGAAGAACGAAAACGATGTGCCTATTTTGGAGACTTTCGACGTGGAATTTGAGACTGAAGGCTGTAGTTTGAAGAACGAAAATGCAGTGATTTCATCTCATCAAATGGATGAGTCTAATTTGGCGAAAGATGAACCTGCAAAACTGGAATTGGCGGGTATGGAAACTTTGGATACGGAATTTGCAATTGAAGACTGTACCTTGAATAAGGAAGCTATGTCTGACGACTCAAAATCCTCGTTGTCCAATATCAATAATGGTGGTTCCGGTCCTTGTATGAAGGAGACTTTAACTAAAAGGTATGCTCTTCGTAAAAAAGTTGCAGAGTTCAGAAATTTGGTTAACATAAATTCTAAGGTCCCATCAGGCAGGAAAGTAGTGCAAGGTTTGATGGCTACATCAGAATGGAAAGCAGGAAAGAAAGTTGATTTTTATGCCCAGCTGGACAAGTCTAAAACTGCTACCAAGTCAAAAGGTGTACTGAATCTTTCTGGGCACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGATGACATGGGTCAATTAGTAACAGTGGAGAAGAGTGGGGAAGATTTAGACCTAATTCCTCAAAATTATGAGTTGAACGAGGATTTGTTTGTTACAAACACTGTTGAACAAACAAGTGACTGTAGTTTGAAGAAGGAAGATCCCATGGTCTTATCTGATCAAGTGGATGGGGATAGTTTTGCTAACGATGAACCTGCAGAAGTGGAATTGATTGGCATAAAAACTATGGATACGGAATTTGCAACTGAAGACTGTACCTTCAAAAAGGAAGATCCCGTGGTCTCATCTCATCAATTGGATGTGCGTATTTTGGAGACTTTCGATGTGAAATTTTCAACTGAAAGCTGTGGTTTGAAGAACGAAAATGCAGTGATTTCATCTCATCAAATGGATGAGTCTACTTTGGCAAACGACGAACATGCAAAACTGACATTGGTGGGTATGGAAACTTTGGATACGGAATTTGTCACAGAATGCTTCGTAAAACAAGATTTATCCTATATATCAAAGGCATTGTATCCAGTTGGCGAGGCAGCTATGTCTGATGACTCAAAATCCTCGTTGTCCAATATCAATAATGGTGGTTCTGGTCCTTTTATGAAGGAGGCTTTAACTAAAAGGTATGCTCTTCGTAAAAAAGTTTCAGAGTTCAGAGATTTTCCACGTTTATGTGAAGGCAATGCTCCCCATCTCAGTCAGGATGAGTGTCAAAACGAGCTTTCTTCTTTGAAAGAAGTTGCAGTCACTGACGTAAGAGAAGCAGATAATAACAAGAGAAAGTTTGATAACATTGTTCAAGCTGATTCTGCAGGGAACCCTAAACTTCCTGAAAAACATAATCGTCGTCATCATCAGGTTAACATAAATTCTAAGGCAGTGGTTAAAGCGGAAAACATAAACACTGTAAAACTCGAAAGTAGTTCAAAGGTCTCATCAGGAAGGAAAGTAGTGCGAGGTTTGGCATCTATATCAGAATGGAAAGAAATGAAAAGAAAGGGAAAGAAAGTAGATTTTATTGCCCAGCTGGACAGGTCTAAACCTGCTACCAAGTTGAAAGGTGGACTGAATCATTCTGAGAACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGCTGACATGGGTCAATTAGTAACGTTGGAGAAGAATTCTCTAGACCCTAATGAAAATAACGAACACTTTAAAAGTGTCACAAAATCACCTGGTTCAAGTGTAAATGTTTTTCCTCTTGGTCGTAGCAATTTGAGTGGTCATGAGAATGACTCAGTGGCCAGGAATAAAGTGAGGAAAGCATTGCGACTGTTCCGAGCTTTTTATAGAAAGATTTTGCAGGAAGCCGAAGCAAAGCCAAAGTCAAATGAGAAAGAAATAAAGAGGTTTGATTTACAAGATGCGAAAAAGCTCAAGGAGGAAGGGATCTATGTTAATGAAGAGGAGAATATCTTAGGATCTGTTCCTGGGGTTGAAGTGGGTGATGAATTTCAATACAGAATAGAGCTTAATATAATTGGCCTTCATCGTGAGATTCAGGGTGGTATAGATTATGTGAAGCAAAAAGATAAGATTCTTGCAACTAGTATTGTTGCTTCGGGGGGCTATGCTGGCGACTTAGATAACTCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGACGAGCAGTGATAAAGAGCCAGAAGATCAGAAGCTTGAACGGGGAAATCTTGCTTTGAAGAACAGTAGTGAGGTAAAGAATTCTGTTAGGGTGATACGGGGCTCTGAATCGATGGATGGAAAAAGCAAGATATATGTTTATGATGGACTTTATGTAGTTGAGTCATGTTGGCAGGATATAGGGCCACATGGGAAGCTGGTTTATAAGTTTCACTTGCGAAGAATCCCGGGTCAACCCGAGCTTGCCTTGAAGGAAGTGAAGAAATCTAAGAAGTTCAAAACAAGAGAAGGTCTATGTGTCGAAGATATTTCCTACGGGAAAGAGAAAATTCCTATATGTGCTGTGAACACCATAGATAACGAGAAACCCCCTACATTTAAATACATAACGGAGATGATATATCCTGAATGTTGCAATCTTGTCCCTCCAAAAGGATGTAATTGTACTAATGGATGCTCTGACCATAAGAAATGTTCTTGTGTACTCAAAAATGGAGGGGAGATTCCATTTAATCATAATGGGGATATTATAGAAGTAAAGCCTCTAGTGTATGAGTGTGGTCCTAAATGCAAGTGCTCTTCAACCTGCCATAACAGAGTTAGCCAACTTGGCATAAATATTCAACTCGAAATATTTAAAACCAATTCAATGGGATGGGGTGTAAGATCCTTAAATTCCATCCCTTCGGGAAGTTTTATCTGTGAATATATTGGAGAGGTTCTTGAAGAAAAGGAAGCTGAACAAAGAACAGGTAATGATGAGTATCTTTTCGATATCGGAAATAACAAAAACAACAATAATCTTTGGGATGGACTTTCAAACCTTTTTCCAGATTCTGACTCAAGTTCAAGTGAAGTAGTGGAGGTTTCTGACTTCACTATCGATGCTGCTCAGTTTGGTAATGTTGGGAGATTTATTAACCATAGCTGCTCCCCTAATCTTTATGCTCAGGATGTCCTTTATGATCATAAAGACAGCAGGGTTCCTCACATCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGACATACGATTACAATTACATGATAGATACAGTTCGTGATTCCGATGGCAATATCAAAAAGAAGTACTGCTTTTGTGGTTCTGAGGAATGTACTGGTAGGTTGTATTGA
Protein sequence

>MS.gene034066.t1

MDESNLVKDEPAKLELAGMETLDTEFPTEDCTLNKEDHVVPSQQLDVPILETFDVEFATESCSLKNENDVPILETFDVEFETEGCSLKNENAVISSHQMDESNLAKDEPAKLELAGMETLDTEFAIEDCTLNKEAMSDDSKSSLSNINNGGSGPCMKETLTKRYALRKKVAEFRNLVNINSKVPSGRKVVQGLMATSEWKAGKKVDFYAQLDKSKTATKSKGVLNLSGHQPLKKKRENSSSDDMGQLVTVEKSGEDLDLIPQNYELNEDLFVTNTVEQTSDCSLKKEDPMVLSDQVDGDSFANDEPAEVELIGIKTMDTEFATEDCTFKKEDPVVSSHQLDVRILETFDVKFSTESCGLKNENAVISSHQMDESTLANDEHAKLTLVGMETLDTEFVTECFVKQDLSYISKALYPVGEAAMSDDSKSSLSNINNGGSGPFMKEALTKRYALRKKVSEFRDFPRLCEGNAPHLSQDECQNELSSLKEVAVTDVREADNNKRKFDNIVQADSAGNPKLPEKHNRRHHQVNINSKAVVKAENINTVKLESSSKVSSGRKVVRGLASISEWKEMKRKGKKVDFIAQLDRSKPATKLKGGLNHSENQPLKKKRENSSSADMGQLVTLEKNSLDPNENNEHFKSVTKSPGSSVNVFPLGRSNLSGHENDSVARNKVRKALRLFRAFYRKILQEAEAKPKSNEKEIKRFDLQDAKKLKEEGIYVNEEENILGSVPGVEVGDEFQYRIELNIIGLHREIQGGIDYVKQKDKILATSIVASGGYAGDLDNSDVLIYTGQGGNVTSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGSESMDGKSKIYVYDGLYVVESCWQDIGPHGKLVYKFHLRRIPGQPELALKEVKKSKKFKTREGLCVEDISYGKEKIPICAVNTIDNEKPPTFKYITEMIYPECCNLVPPKGCNCTNGCSDHKKCSCVLKNGGEIPFNHNGDIIEVKPLVYECGPKCKCSSTCHNRVSQLGINIQLEIFKTNSMGWGVRSLNSIPSGSFICEYIGEVLEEKEAEQRTGNDEYLFDIGNNKNNNNLWDGLSNLFPDSDSSSSEVVEVSDFTIDAAQFGNVGRFINHSCSPNLYAQDVLYDHKDSRVPHIMLFAAENIPPLQELTYDYNYMIDTVRDSDGNIKKKYCFCGSEECTGRLY