AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09713

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09713.t1 MTR_5g013420 96.419 1089 38 1 1 1088 1 1089 0.0 2154
MS.gene09713.t1 MTR_5g013420 96.327 1089 39 1 1 1088 1 1089 0.0 2150
MS.gene09713.t1 MTR_4g010830 69.843 1081 210 12 23 1088 1 980 0.0 1406
MS.gene09713.t1 MTR_4g010550 77.374 495 76 6 599 1088 1 464 0.0 754
MS.gene09713.t1 MTR_7g445710 43.446 534 214 11 576 1088 77 543 4.40e-125 394
MS.gene09713.t1 MTR_8g042750 39.761 586 305 14 532 1085 116 685 1.06e-124 397
MS.gene09713.t1 MTR_3g011440 41.111 540 296 14 567 1087 127 663 1.38e-122 391
MS.gene09713.t1 MTR_7g084090 42.553 517 261 13 603 1088 246 757 2.24e-118 383
MS.gene09713.t1 MTR_7g450730 42.015 526 210 10 570 1088 68 505 5.23e-118 374
MS.gene09713.t1 MTR_8g070070 42.174 460 244 8 617 1057 299 755 7.22e-115 374
MS.gene09713.t1 MTR_7g088370 39.962 523 279 17 580 1087 202 704 8.81e-115 372
MS.gene09713.t1 MTR_6g061270 41.811 519 265 12 603 1088 180 694 1.27e-114 371
MS.gene09713.t1 MTR_8g070075 41.342 462 249 8 615 1057 290 748 2.72e-112 367
MS.gene09713.t1 MTR_1g048950 41.373 539 257 11 576 1088 28 533 2.52e-111 358
MS.gene09713.t1 MTR_1g035420 39.000 500 283 9 581 1064 158 651 5.59e-110 357
MS.gene09713.t1 MTR_7g445530 42.262 504 203 11 576 1058 77 513 7.30e-110 352
MS.gene09713.t1 MTR_6g061200 41.165 498 249 10 611 1088 192 665 1.00e-109 357
MS.gene09713.t1 MTR_8g071030 41.048 458 250 7 618 1057 280 735 1.58e-107 353
MS.gene09713.t1 MTR_6g044690 38.889 468 247 12 615 1057 109 562 3.54e-94 311
MS.gene09713.t1 MTR_1g035400 37.791 516 276 17 581 1064 68 570 1.25e-90 302
MS.gene09713.t1 MTR_0376s0030 36.454 502 262 15 585 1057 87 560 1.39e-87 294
MS.gene09713.t1 MTR_6g043960 34.510 510 267 14 584 1057 2 480 1.28e-77 264
MS.gene09713.t1 MTR_7g084090 41.085 387 203 11 603 967 246 629 2.50e-77 268
MS.gene09713.t1 MTR_2g054460 33.202 506 257 13 581 1057 9 462 4.81e-70 242
MS.gene09713.t1 MTR_7g052480 42.042 333 165 9 774 1088 234 556 5.57e-67 236
MS.gene09713.t1 MTR_5g018850 34.954 329 150 10 801 1088 1202 1507 3.31e-44 175
MS.gene09713.t1 MTR_7g445600 52.055 146 33 1 913 1058 248 356 2.96e-42 159
MS.gene09713.t1 MTR_7g445600 40.606 165 81 3 576 740 73 220 3.95e-29 120
MS.gene09713.t1 MTR_8g078490 40.271 221 103 7 874 1088 1056 1253 3.59e-41 165
MS.gene09713.t1 MTR_4g132610 38.182 220 107 5 875 1088 851 1047 4.55e-37 152
MS.gene09713.t1 MTR_8g078505 33.871 310 149 12 806 1083 248 533 4.94e-36 144
MS.gene09713.t1 MTR_1g069570 30.606 330 159 11 808 1083 428 741 1.57e-31 133
MS.gene09713.t1 MTR_1g080340 28.286 350 162 9 801 1086 260 584 3.45e-30 127
MS.gene09713.t1 MTR_7g445810 38.191 199 94 6 576 766 90 267 7.22e-30 120
MS.gene09713.t1 MTR_7g098390 27.108 332 162 9 810 1083 388 697 5.17e-27 119
MS.gene09713.t1 MTR_1g069570 29.389 262 119 9 808 1016 428 676 2.57e-22 103
MS.gene09713.t1 MTR_0071s0100 30.451 266 114 12 831 1087 145 348 3.60e-20 94.4
MS.gene09713.t1 MTR_1g098370 33.333 195 92 8 893 1084 75 234 1.32e-18 90.9
MS.gene09713.t1 MTR_1g098000 32.821 195 93 8 893 1084 72 231 3.04e-18 89.7
MS.gene09713.t1 MTR_6g059310 30.303 198 104 6 890 1087 87 250 4.14e-18 87.4
MS.gene09713.t1 MTR_6g059310 30.303 198 104 6 890 1087 87 250 4.33e-18 87.8
MS.gene09713.t1 MTR_3g088625 34.694 196 84 7 898 1087 1201 1358 7.59e-18 90.1
MS.gene09713.t1 MTR_3g088625 34.694 196 84 7 898 1087 1307 1464 8.01e-18 90.1
MS.gene09713.t1 MTR_6g027690 29.461 241 126 10 853 1087 217 419 5.47e-15 79.0
MS.gene09713.t1 MTR_5g098680 33.333 153 91 3 643 787 267 416 2.53e-14 78.2
MS.gene09713.t1 MTR_8g027725 33.333 156 66 5 914 1063 791 914 1.42e-12 72.8
MS.gene09713.t1 MTR_8g027725 33.333 156 66 5 914 1063 806 929 1.64e-12 72.4
MS.gene09713.t1 MTR_1g064770 43.077 65 36 1 888 951 28 92 5.78e-12 63.2
MS.gene09713.t1 MTR_7g117355 31.410 156 69 4 914 1063 821 944 1.97e-11 68.9
MS.gene09713.t1 MTR_6g044000 37.500 104 50 2 584 672 2 105 6.53e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09713.t1 AT2G22740 64.054 523 171 8 581 1088 270 790 0.0 664
MS.gene09713.t1 AT2G22740 64.054 523 171 8 581 1088 270 790 0.0 664
MS.gene09713.t1 AT2G35160 61.047 516 167 5 580 1088 306 794 0.0 651
MS.gene09713.t1 AT2G35160 61.047 516 167 5 580 1088 306 794 0.0 651
MS.gene09713.t1 AT2G35160 61.047 516 167 5 580 1088 306 794 0.0 651
MS.gene09713.t1 AT2G35160 61.047 516 167 5 580 1088 270 758 0.0 651
MS.gene09713.t1 AT2G35160 61.047 516 167 5 580 1088 306 794 0.0 651
MS.gene09713.t1 AT5G04940 41.459 521 285 14 581 1087 155 669 1.45e-119 383
MS.gene09713.t1 AT5G04940 41.459 521 285 14 581 1087 155 669 1.45e-119 383
MS.gene09713.t1 AT5G13960 40.255 549 283 13 570 1088 91 624 9.10e-117 374
MS.gene09713.t1 AT5G13960 42.650 483 245 10 635 1088 11 490 8.42e-116 367
MS.gene09713.t1 AT1G73100 39.439 535 294 14 569 1087 148 668 1.66e-113 367
MS.gene09713.t1 AT4G13460 38.710 527 296 11 555 1062 123 641 2.58e-109 355
MS.gene09713.t1 AT4G13460 38.710 527 296 11 555 1062 123 641 2.58e-109 355
MS.gene09713.t1 AT2G33290 37.278 507 300 7 566 1057 134 637 2.59e-105 345
MS.gene09713.t1 AT2G33290 37.278 507 300 7 566 1057 134 637 2.59e-105 345
MS.gene09713.t1 AT2G33290 37.278 507 300 7 566 1057 134 637 2.59e-105 345
MS.gene09713.t1 AT2G33290 37.278 507 300 7 566 1057 134 637 2.59e-105 345
MS.gene09713.t1 AT1G17770 35.609 542 310 14 569 1087 167 692 5.22e-92 310
MS.gene09713.t1 AT2G24740 37.873 536 285 18 569 1087 250 754 5.21e-89 303
MS.gene09713.t1 AT5G47150 47.685 216 110 3 577 790 114 328 5.53e-52 186
MS.gene09713.t1 AT5G47160 33.691 466 237 17 328 782 3 407 6.97e-51 186
MS.gene09713.t1 AT5G47160 33.691 466 237 17 328 782 3 407 6.97e-51 186
MS.gene09713.t1 AT5G47160 33.691 466 237 17 328 782 3 407 6.97e-51 186
MS.gene09713.t1 AT2G23740 31.915 329 169 11 794 1087 1066 1374 7.32e-36 148
MS.gene09713.t1 AT2G23740 31.915 329 169 11 794 1087 1073 1381 7.54e-36 148
MS.gene09713.t1 AT2G23740 31.915 329 169 11 794 1087 1073 1381 7.54e-36 148
MS.gene09713.t1 AT2G23740 31.915 329 169 11 794 1087 1073 1381 7.54e-36 148
MS.gene09713.t1 AT3G04380 28.035 346 167 11 801 1086 110 433 1.30e-28 121
MS.gene09713.t1 AT3G04380 28.035 346 167 11 801 1086 121 444 1.48e-28 121
MS.gene09713.t1 AT3G04380 28.035 346 167 11 801 1086 137 460 1.55e-28 121
MS.gene09713.t1 AT3G04380 28.035 346 167 11 801 1086 137 460 1.65e-28 121
MS.gene09713.t1 AT3G04380 28.035 346 167 11 801 1086 94 417 2.19e-28 120
MS.gene09713.t1 AT3G04380 28.035 346 167 11 801 1086 110 433 2.26e-28 120
MS.gene09713.t1 AT2G05900 34.975 203 121 7 656 848 1 202 6.43e-28 115
MS.gene09713.t1 AT2G05900 39.286 84 43 2 1004 1087 236 311 5.05e-11 65.9
MS.gene09713.t1 AT2G23740 32.171 258 124 9 794 1016 1073 1314 2.11e-26 117
MS.gene09713.t1 AT2G23740 32.171 258 124 9 794 1016 1073 1314 2.11e-26 117
MS.gene09713.t1 AT1G04050 27.246 334 169 12 808 1086 407 721 1.08e-25 114
MS.gene09713.t1 AT1G04050 27.246 334 169 12 808 1086 407 721 1.08e-25 114
MS.gene09713.t1 AT1G04050 33.166 199 111 5 891 1086 438 617 2.04e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 396 707 2.52e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 396 707 2.52e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 393 704 2.68e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 393 704 2.68e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 393 704 2.68e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 393 704 2.68e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 373 684 2.90e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 373 684 2.90e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 373 684 2.90e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 373 684 2.90e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 416 727 3.23e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 416 727 3.23e-25 113
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 304 615 5.40e-25 112
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 324 635 5.84e-25 112
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 324 635 5.84e-25 112
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 324 635 5.84e-25 112
MS.gene09713.t1 AT5G43990 27.410 332 168 11 808 1086 324 635 5.84e-25 112
MS.gene09713.t1 AT3G03750 30.800 250 126 8 847 1087 138 349 2.06e-21 97.8
MS.gene09713.t1 AT4G30860 31.047 277 126 11 817 1087 247 464 7.69e-19 91.7
MS.gene09713.t1 AT1G76710 33.838 198 93 7 893 1087 66 228 1.02e-18 91.3
MS.gene09713.t1 AT1G76710 33.838 198 93 7 893 1087 66 228 1.02e-18 91.3
MS.gene09713.t1 AT1G76710 33.838 198 93 7 893 1087 66 228 1.25e-18 91.3
MS.gene09713.t1 AT1G76710 33.838 198 93 7 893 1087 66 228 1.29e-18 91.3
MS.gene09713.t1 AT1G77300 33.158 190 95 7 898 1087 1009 1166 4.73e-17 87.4
MS.gene09713.t1 AT1G77300 33.158 190 95 7 898 1087 1009 1166 6.17e-17 87.4
MS.gene09713.t1 AT3G59960 31.395 172 84 6 916 1087 112 249 4.52e-15 77.4
MS.gene09713.t1 AT3G59960 31.395 172 84 6 916 1087 112 249 4.52e-15 77.4
MS.gene09713.t1 AT3G59960 31.395 172 84 6 916 1087 112 249 4.52e-15 77.4
MS.gene09713.t1 AT1G57820 33.117 154 91 4 643 787 277 427 1.93e-14 78.6
MS.gene09713.t1 AT1G57820 33.117 154 91 4 643 787 277 427 1.93e-14 78.6
MS.gene09713.t1 AT3G59960 31.395 172 84 6 916 1087 112 249 1.10e-13 73.9
MS.gene09713.t1 AT1G57820 32.450 151 93 4 643 787 277 424 1.13e-13 75.9
MS.gene09713.t1 AT2G44150 29.070 172 88 6 916 1087 117 254 2.62e-13 73.2
MS.gene09713.t1 AT3G61740 35.032 157 63 6 914 1063 838 962 3.50e-13 74.7
MS.gene09713.t1 AT3G03750 27.600 250 118 10 847 1087 138 333 3.85e-13 72.4
MS.gene09713.t1 AT3G61740 35.032 157 63 6 914 1063 874 998 4.52e-13 74.3
MS.gene09713.t1 AT4G27910 31.098 164 70 6 926 1083 896 1022 3.43e-11 68.2

Find 265 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGATGTTGGTTTAAATT+TGG 0.118788 5.2:-5401633 None:intergenic
TCAATTGGATGTGCCTATTT+TGG 0.119192 5.2:+5400836 MS.gene09713:CDS
TCAAGTGGATGGTTATATTT+TGG 0.167556 5.2:+5400704 MS.gene09713:CDS
GAACATTCTGAAGAAGAATT+AGG 0.193360 5.2:+5400246 MS.gene09713:CDS
TTCAAACTACTTTCAAGTTC+TGG 0.218462 5.2:-5401533 None:intergenic
ATGGATGTTGGTTTAAATTT+GGG 0.221824 5.2:-5401632 None:intergenic
ATCTTAGTTATGTATTTAAA+TGG 0.224199 5.2:-5402709 None:intergenic
TTTACATAACCACGTGGTTT+TGG 0.228610 5.2:-5401875 None:intergenic
CGTTCAAGCTTCTGATCTTC+TGG 0.239657 5.2:-5402355 None:intergenic
GTTAAGAGTGGTGAAGATTT+AGG 0.245357 5.2:+5400402 MS.gene09713:CDS
TGGCCTTCATCGCCAGATTC+AGG 0.250113 5.2:+5402189 MS.gene09713:CDS
CTTGAACTTGAGTGCGAATC+TGG 0.264717 5.2:-5403165 None:intergenic
AGAATAGAGCTTAATATAAT+TGG 0.267824 5.2:+5402169 MS.gene09713:CDS
CAACTAGTATTGTTGCTTCC+GGG 0.287565 5.2:+5402251 MS.gene09713:CDS
TCTTCGTTATTATCCAAAAT+AGG 0.293857 5.2:-5400849 None:intergenic
GGTGATCATAAAGGACATTC+TGG 0.295328 5.2:-5403284 None:intergenic
ATAGCTCCATTATGATTAAA+TGG 0.296004 5.2:-5402841 None:intergenic
TCCTTGAATTCCATCCCTTC+TGG 0.302980 5.2:+5403003 MS.gene09713:CDS
GATTTAGGTGGTGGTGATTC+GGG 0.318391 5.2:+5400417 MS.gene09713:CDS
TGAGTCATATTGGCAGGATA+TGG 0.322593 5.2:+5402495 MS.gene09713:CDS
GTTGGAGGGCACTTGCATTT+AGG 0.324234 5.2:-5402898 None:intergenic
AAAGGCTGTAATTGTACTAA+TGG 0.324470 5.2:+5402766 MS.gene09713:CDS
TGAAGACTGTAGCTTGAAAA+AGG 0.324757 5.2:+5400659 MS.gene09713:CDS
GGGCATGGAAGCTGTGGATA+TGG 0.325224 5.2:+5400758 MS.gene09713:CDS
GGGAAGCCAGTGATGGTAAA+TGG 0.328236 5.2:+5400267 MS.gene09713:CDS
GCAACTAGTATTGTTGCTTC+CGG 0.330626 5.2:+5402250 MS.gene09713:CDS
TTAGTACAATTACAGCCTTT+TGG 0.332092 5.2:-5402763 None:intergenic
GGAACCACCTATATTGATAT+TGG 0.333643 5.2:-5401150 None:intergenic
GGAGACTTTGGATGCGGAAT+TGG 0.341628 5.2:+5400896 MS.gene09713:CDS
TGAAGGAGGCTTTAACTAAA+AGG 0.341984 5.2:+5401183 MS.gene09713:CDS
AAGATCATGGGATCTGTTCC+TGG 0.350847 5.2:+5402118 MS.gene09713:CDS
AAAGGTGTACTAAATCATTC+TGG 0.352831 5.2:+5401734 MS.gene09713:CDS
CCGGAAGAATGTGGACCATT+TGG 0.354417 5.2:+5400354 MS.gene09713:CDS
TTTGATTGAAAAGATGAATT+CGG 0.361033 5.2:+5400200 None:intergenic
AATCTATACCACCCTGAATC+TGG 0.365878 5.2:-5402201 None:intergenic
GAGATTCCATTTAATCATAA+TGG 0.367693 5.2:+5402835 MS.gene09713:CDS
AACATTCTGAAGAAGAATTA+GGG 0.368058 5.2:+5400247 MS.gene09713:CDS
AGATTTAGGTGGTGGTGATT+CGG 0.370179 5.2:+5400416 MS.gene09713:CDS
CGGTATGGAAACTTCAGATA+TGG 0.371541 5.2:+5401022 MS.gene09713:CDS
TGAACCTGCAAAAGTGAAAT+TGG 0.375933 5.2:+5400602 MS.gene09713:CDS
GACATTCTGGGCATAGAGAT+TGG 0.378566 5.2:-5403271 None:intergenic
TATGGTGTTCACAGCACATA+TGG 0.381418 5.2:-5402668 None:intergenic
CATGGTCTCATCTCATCAAT+TGG 0.383281 5.2:+5400821 MS.gene09713:CDS
AGAATGATTTAGTACACCTT+TGG 0.384346 5.2:-5401732 None:intergenic
ACATTCTGGGCATAGAGATT+GGG 0.385745 5.2:-5403270 None:intergenic
TTTATGATCACCATGACAAC+AGG 0.387530 5.2:+5403295 MS.gene09713:CDS
TCAAACTACTTTCAAGTTCT+GGG 0.387932 5.2:-5401532 None:intergenic
GATTCTTTCACATTTGACTT+TGG 0.398140 5.2:-5402028 None:intergenic
TCATTGTCCAATATCAATAT+AGG 0.398722 5.2:+5401143 MS.gene09713:CDS
ACTTTCCGACGCTTAAACTT+AGG 0.400866 5.2:-5400312 None:intergenic
TTCTACAAACAGCTTGGAAC+AGG 0.402055 5.2:-5401979 None:intergenic
AAATGACGGACCTGCAGAAC+TGG 0.405443 5.2:+5400992 MS.gene09713:CDS
GAAAGTAGTGCTAGGTTTGA+TGG 0.408534 5.2:+5401571 MS.gene09713:CDS
TGAAGCTTCAAAAGTGGAAT+TGG 0.409850 5.2:+5400734 MS.gene09713:CDS
GTTTCGCTTGCGAAGAAAGC+CGG 0.413635 5.2:+5402543 MS.gene09713:CDS
TCAAATTGATGAGTCTACTT+TGG 0.415306 5.2:+5400968 MS.gene09713:CDS
AAAATCAGCTTCAACAAAGT+TGG 0.420516 5.2:-5401369 None:intergenic
GCGAGGTCAAGAATTCTGTT+AGG 0.421124 5.2:+5402404 MS.gene09713:CDS
TGTGGTTCTGTGGAATGTAC+TGG 0.421622 5.2:+5403444 MS.gene09713:CDS
GCCAATCTCATCTCAGTAGA+TGG 0.421747 5.2:-5401428 None:intergenic
CACCCTGAATCTGGCGATGA+AGG 0.425090 5.2:-5402192 None:intergenic
AGAACTTGAAAGTAGTTTGA+AGG 0.428714 5.2:+5401535 MS.gene09713:CDS
TGTTGTCATGGTGATCATAA+AGG 0.429329 5.2:-5403293 None:intergenic
TCTATGAAGTTGAGTCATAT+TGG 0.437887 5.2:+5402485 MS.gene09713:CDS
GACATAGCTACCTCGCCAAC+TGG 0.438153 5.2:-5401104 None:intergenic
ATTGGTGGGCATGGAGACTT+TGG 0.440213 5.2:+5400884 MS.gene09713:CDS
TGCAATATTGTCCCTCCAAA+AGG 0.442817 5.2:+5402748 MS.gene09713:CDS
GAGTCATATTGGCAGGATAT+GGG 0.443386 5.2:+5402496 MS.gene09713:CDS
AGAAGATCAGAAGCTTGAAC+GGG 0.449548 5.2:+5402357 MS.gene09713:CDS
GGAAGCTGTGGATATGGAAT+TGG 0.449691 5.2:+5400764 MS.gene09713:CDS
GGCCAAGTCAGAATGTCCTT+GGG 0.450886 5.2:+5401592 MS.gene09713:CDS
TCATCACAAACCAACATTGA+TGG 0.455705 5.2:-5400225 None:intergenic
CGGGTCAACCAGAGCTTGCT+TGG 0.460037 5.2:+5402563 MS.gene09713:CDS
TCTGTTCCTGGGGTTGAAGT+TGG 0.460888 5.2:+5402130 MS.gene09713:CDS
CCAAATGGTCCACATTCTTC+CGG 0.462142 5.2:-5400354 None:intergenic
TAAAACCAAGTCAATGGGAT+GGG 0.462217 5.2:+5402972 MS.gene09713:CDS
TGGCCAAGTCAGAATGTCCT+TGG 0.468262 5.2:+5401591 MS.gene09713:CDS
GGAAAACATGAACATCGTTA+AGG 0.468416 5.2:+5401478 MS.gene09713:CDS
AGTACCTTCCAAGCAAGCTC+TGG 0.469016 5.2:-5402571 None:intergenic
TCCAGAAGGGATGGAATTCA+AGG 0.469469 5.2:-5403004 None:intergenic
TATAATAGAGTCAGCCAACT+TGG 0.470293 5.2:+5402925 MS.gene09713:CDS
GAGTCTCCATTTACCATCAC+TGG 0.471142 5.2:-5400273 None:intergenic
GGCCTTCATCGCCAGATTCA+GGG 0.471401 5.2:+5402190 MS.gene09713:CDS
ACTATCGATGCCGCTCAGTT+CGG 0.474989 5.2:+5403213 MS.gene09713:CDS
GGGACAATATTGCAACAATC+AGG 0.476635 5.2:-5402739 None:intergenic
GAATTCTGTTAGGGTGATAC+GGG 0.481274 5.2:+5402414 MS.gene09713:CDS
GGCACTGGATAATCATCATC+AGG 0.481375 5.2:+5401448 MS.gene09713:CDS
CAGAAGATCAGAAGCTTGAA+CGG 0.482485 5.2:+5402356 MS.gene09713:CDS
TATGGGGCCACATGGGAAGC+TGG 0.483438 5.2:+5402513 MS.gene09713:CDS
ACACTCATCCTGGCTGAGAC+GGG 0.486717 5.2:-5401270 None:intergenic
AGAATTCTGTTAGGGTGATA+CGG 0.488400 5.2:+5402413 MS.gene09713:CDS
ATCTTATATATCAGAGGCAC+CGG 0.488681 5.2:+5401079 MS.gene09713:CDS
ATTTAGTACACCTTTGGACT+TGG 0.490483 5.2:-5401726 None:intergenic
GTTGAATATTTATGCCAAGT+TGG 0.491644 5.2:-5402939 None:intergenic
GATATGGAATTTACAACAGA+AGG 0.491786 5.2:+5401038 MS.gene09713:CDS
CCGACCAATGCCAGTTCTGC+AGG 0.494283 5.2:-5401002 None:intergenic
AACTAGTATTGTTGCTTCCG+GGG 0.494402 5.2:+5402252 MS.gene09713:CDS
CTTATCTGATCAAGTGGATG+TGG 0.494648 5.2:+5400563 MS.gene09713:CDS
AGGGAATGCGGTCAAGAAGC+TGG 0.495760 5.2:+5401394 MS.gene09713:CDS
GTTATGTATTTAAATGGAGG+GGG 0.500203 5.2:-5402703 None:intergenic
CTTGGTCGTAGTAATTTAAG+TGG 0.500245 5.2:+5401908 MS.gene09713:CDS
TAATGAAGGGGAGAAGATCA+TGG 0.501403 5.2:+5402105 MS.gene09713:CDS
TACTGAGATGAGATTGGCAC+TGG 0.503247 5.2:+5401433 MS.gene09713:CDS
TGGCAGGATATGGGGCCACA+TGG 0.503771 5.2:+5402505 MS.gene09713:CDS
CTGACTCTATTATAACAAGT+TGG 0.504283 5.2:-5402916 None:intergenic
CGCGTTGAAGATATTTCCTA+CGG 0.505475 5.2:+5402631 MS.gene09713:CDS
AAAACTGACATTGGTGGGCA+TGG 0.507583 5.2:+5400875 MS.gene09713:CDS
TTTCGCTTGCGAAGAAAGCC+GGG 0.508175 5.2:+5402544 MS.gene09713:CDS
GCCGCTCAGTTCGGTAATGT+AGG 0.508262 5.2:+5403222 MS.gene09713:CDS
TAATCATCATCAGGTTAAAG+TGG 0.509315 5.2:+5401457 MS.gene09713:CDS
ATTGGTGGGCGTAGAAGCTA+TGG 0.509409 5.2:+5400620 MS.gene09713:CDS
AAAGGGAGCTATGTTAATGA+AGG 0.510173 5.2:+5402091 MS.gene09713:CDS
TGTACTGGTAGGTTGTATTG+AGG 0.511536 5.2:+5403459 MS.gene09713:CDS
AAGGTGTACTAAATCATTCT+GGG 0.513245 5.2:+5401735 MS.gene09713:CDS
AAATTTAAACCAACATCCAT+TGG 0.513515 5.2:+5401635 MS.gene09713:CDS
GGACCATTTGGTTCTGCTGA+TGG 0.515692 5.2:+5400366 MS.gene09713:CDS
TGATAGTCCCAACGACGAAA+AGG 0.515728 5.2:+5400446 MS.gene09713:CDS
GCTACCTCGCCAACTGGAGC+CGG 0.515868 5.2:-5401098 None:intergenic
ACCATCTACTGAGATGAGAT+TGG 0.516227 5.2:+5401427 MS.gene09713:CDS
TTGAGTGCGAATCTGGCAAA+AGG 0.518542 5.2:-5403158 None:intergenic
AATATCAATATAGGTGGTTC+CGG 0.518966 5.2:+5401152 MS.gene09713:CDS
GTGATCATAAAGGACATTCT+GGG 0.521375 5.2:-5403283 None:intergenic
TACACCCCATCCCATTGACT+TGG 0.523806 5.2:-5402977 None:intergenic
TGAAGACTGTAGCTTGAGAA+AGG 0.523979 5.2:+5400791 MS.gene09713:CDS
CGAGGTCAAGAATTCTGTTA+GGG 0.527113 5.2:+5402405 MS.gene09713:CDS
TGAAGTTGAGTCATATTGGC+AGG 0.528849 5.2:+5402489 MS.gene09713:CDS
CAATGCTCCCCGTCTCAGCC+AGG 0.529270 5.2:+5401262 MS.gene09713:CDS
AAGGAAGCTGAACAAAGAAC+TGG 0.530093 5.2:+5403066 MS.gene09713:CDS
AGCTTCAAAAGTGGAATTGG+TGG 0.531376 5.2:+5400737 MS.gene09713:CDS
AGATCATGGGATCTGTTCCT+GGG 0.531698 5.2:+5402119 MS.gene09713:CDS
ATCGTAAGTCAGCTCTTGCA+AGG 0.532130 5.2:-5403358 None:intergenic
TCAACCAGAGCTTGCTTGGA+AGG 0.533430 5.2:+5402567 MS.gene09713:CDS
TAGTTATGTATTTAAATGGA+GGG 0.533607 5.2:-5402705 None:intergenic
ACTCTATTATAACAAGTTGG+AGG 0.533970 5.2:-5402913 None:intergenic
AAGGGAGCTATGTTAATGAA+GGG 0.535402 5.2:+5402092 MS.gene09713:CDS
CCTAGCACTACTTTCCTGCC+TGG 0.535459 5.2:-5401563 None:intergenic
GCTCCTTTAGACACTCATCC+TGG 0.536997 5.2:-5401280 None:intergenic
AAAAGTGGAATTGGTGGGCA+TGG 0.537948 5.2:+5400743 MS.gene09713:CDS
CATTCTGGGCATAGAGATTG+GGG 0.538907 5.2:-5403269 None:intergenic
TAACGATGAAGCTTCAAAAG+TGG 0.544439 5.2:+5400728 MS.gene09713:CDS
GATACAAAACTGACATTGGT+GGG 0.544785 5.2:+5400870 MS.gene09713:CDS
AAAGCTTTCTACAAACAGCT+TGG 0.545465 5.2:-5401985 None:intergenic
TGGATGTTGGTTTAAATTTG+GGG 0.545850 5.2:-5401631 None:intergenic
AGTTATGTATTTAAATGGAG+GGG 0.547903 5.2:-5402704 None:intergenic
GATAAAACTTCCAGAAGGGA+TGG 0.548978 5.2:-5403013 None:intergenic
TTAGTTATGTATTTAAATGG+AGG 0.549426 5.2:-5402706 None:intergenic
TTAAAACCAAGTCAATGGGA+TGG 0.552622 5.2:+5402971 MS.gene09713:CDS
CGAAGATACAAAACTGACAT+TGG 0.553321 5.2:+5400866 MS.gene09713:CDS
AGCCTCCTTCATACAAGCAC+CGG 0.554334 5.2:-5401171 None:intergenic
GTTTGAAGGTCTCACCAGGC+AGG 0.555243 5.2:+5401549 MS.gene09713:CDS
TTTAAACCAACATCCATTGG+TGG 0.555528 5.2:+5401638 MS.gene09713:CDS
TGGTTCCGGTGCTTGTATGA+AGG 0.555754 5.2:+5401166 MS.gene09713:CDS
CATGAACATCGTTAAGGTCG+AGG 0.556379 5.2:+5401484 MS.gene09713:CDS
CCGCTCAGTTCGGTAATGTA+GGG 0.558292 5.2:+5403223 MS.gene09713:CDS
AACAACAGTAATCTTTGGGA+TGG 0.558592 5.2:+5403126 MS.gene09713:CDS
GAATTCGGAGCCATCAATGT+TGG 0.558730 5.2:+5400215 MS.gene09713:CDS
TCTGTACCACCAATGGATGT+TGG 0.560078 5.2:-5401644 None:intergenic
TATATTGATATTGGACAATG+AGG 0.560906 5.2:-5401141 None:intergenic
CAGCCAGGATGAGTGTCTAA+AGG 0.561581 5.2:+5401277 MS.gene09713:CDS
AGAACTGGCATTGGTCGGTA+TGG 0.564148 5.2:+5401007 MS.gene09713:CDS
AAATTCTAGTTCTGATGACA+TGG 0.567262 5.2:+5401784 MS.gene09713:CDS
ATGAGAGTGACTCAGTGGCC+CGG 0.569197 5.2:+5401933 MS.gene09713:CDS
CAAGCAAGCTCTGGTTGACC+CGG 0.569213 5.2:-5402562 None:intergenic
CCTGTCATCTGTACCACCAA+TGG 0.569944 5.2:-5401651 None:intergenic
GACACTCATCCTGGCTGAGA+CGG 0.572210 5.2:-5401271 None:intergenic
CCATTGGTGGTACAGATGAC+AGG 0.575959 5.2:+5401651 MS.gene09713:CDS
GTCTCATCTCATCAAGTGGA+TGG 0.576397 5.2:+5400693 MS.gene09713:CDS
AAAACCAAGTCAATGGGATG+GGG 0.578324 5.2:+5402973 MS.gene09713:CDS
ACTAGTATTGTTGCTTCCGG+GGG 0.578670 5.2:+5402253 MS.gene09713:CDS
AAGCCTCTAGTCTATGAGTG+TGG 0.578730 5.2:+5402874 MS.gene09713:CDS
AAGTGGCTGTAGTTTGAAGA+AGG 0.580199 5.2:+5400527 MS.gene09713:CDS
TGGAGAGGTTCTTGAGGACA+AGG 0.580571 5.2:+5403047 MS.gene09713:CDS
AGGGAGCTATGTTAATGAAG+GGG 0.580705 5.2:+5402093 MS.gene09713:CDS
ATTGGTGGGCATGGAAGCTG+TGG 0.583994 5.2:+5400752 MS.gene09713:CDS
GTACCATCAGCAGAACCAAA+TGG 0.585802 5.2:-5400369 None:intergenic
TGCGGTCTTATCTGATCAAG+TGG 0.586629 5.2:+5400557 MS.gene09713:CDS
GGGCATGGAGACTTTGGATG+CGG 0.586754 5.2:+5400890 MS.gene09713:CDS
TGTGGTCTCATCTCATCAAG+TGG 0.587074 5.2:+5400689 MS.gene09713:CDS
CGGACCTGCAGAACTGGCAT+TGG 0.588611 5.2:+5400998 MS.gene09713:CDS
TGCTGATGGTACGAGTGTTG+AGG 0.588615 5.2:+5400380 MS.gene09713:CDS
CACAGATAAAACTTCCAGAA+GGG 0.588807 5.2:-5403017 None:intergenic
GGCAGGATATGGGGCCACAT+GGG 0.589278 5.2:+5402506 MS.gene09713:CDS
AGATACAAAACTGACATTGG+TGG 0.589399 5.2:+5400869 MS.gene09713:CDS
ATGGTGTTCACAGCACATAT+GGG 0.589870 5.2:-5402667 None:intergenic
AGCCTCTAGTCTATGAGTGT+GGG 0.592603 5.2:+5402875 MS.gene09713:CDS
TCACAGATAAAACTTCCAGA+AGG 0.593451 5.2:-5403018 None:intergenic
TCCCCAAGGACATTCTGACT+TGG 0.593577 5.2:-5401594 None:intergenic
GAGTCTACTTTGGCAAATGA+CGG 0.594825 5.2:+5400978 MS.gene09713:CDS
TAAGTCAGCTCTTGCAAGGG+AGG 0.595124 5.2:-5403354 None:intergenic
CAATTGATGAGATGAGACCA+TGG 0.596287 5.2:-5400820 None:intergenic
CATGAGGAACCCTGTTGTCA+TGG 0.598124 5.2:-5403305 None:intergenic
AAGCAACAATACTAGTTGCA+AGG 0.598665 5.2:-5402246 None:intergenic
AGTAGTTTGAAGGTCTCACC+AGG 0.598759 5.2:+5401545 MS.gene09713:CDS
TCAGAGGCACCGGCTCCAGT+TGG 0.598975 5.2:+5401089 MS.gene09713:CDS
GGATGTTGGTTTAAATTTGG+GGG 0.601362 5.2:-5401630 None:intergenic
AGTCATATTGGCAGGATATG+GGG 0.602342 5.2:+5402497 MS.gene09713:CDS
CCAGGCAGGAAAGTAGTGCT+AGG 0.602466 5.2:+5401563 MS.gene09713:CDS
CTCTATTATAACAAGTTGGA+GGG 0.603275 5.2:-5402912 None:intergenic
AATGAAGGGGAGAAGATCAT+GGG 0.604075 5.2:+5402106 MS.gene09713:CDS
TCATCACCAACTTCAACCCC+AGG 0.604148 5.2:-5402136 None:intergenic
TTATGTATTTAAATGGAGGG+GGG 0.605614 5.2:-5402702 None:intergenic
AGTGGTGAAGATTTAGGTGG+TGG 0.605730 5.2:+5400408 MS.gene09713:CDS
TTCCGACGCTTAAACTTAGG+CGG 0.605896 5.2:-5400309 None:intergenic
AGATTTATCTTATATATCAG+AGG 0.608018 5.2:+5401073 MS.gene09713:CDS
TTCCGGTGCTTGTATGAAGG+AGG 0.609421 5.2:+5401169 MS.gene09713:CDS
CGGGGATCTGAATCAGCGGA+TGG 0.611571 5.2:+5402433 MS.gene09713:CDS
TATCTGTGAATATATTGGAG+AGG 0.613185 5.2:+5403032 MS.gene09713:CDS
GCTTCAAAAGTGGAATTGGT+GGG 0.613307 5.2:+5400738 MS.gene09713:CDS
TGGTGGTACAGATGACAGGA+AGG 0.614455 5.2:+5401655 MS.gene09713:CDS
AGAATTAGGGAAGCCAGTGA+TGG 0.615410 5.2:+5400260 MS.gene09713:CDS
AATTGATGAGATGAGACCAT+GGG 0.617974 5.2:-5400819 None:intergenic
AGTGAAGTAGTGAATGATGT+TGG 0.618250 5.2:+5403186 MS.gene09713:CDS
AGCAAGATATATGTTTACGA+TGG 0.618907 5.2:+5402460 MS.gene09713:CDS
GGCACCGGCTCCAGTTGGCG+AGG 0.619867 5.2:+5401094 MS.gene09713:CDS
CTTGAGAAAGGAAGATCCCA+TGG 0.621289 5.2:+5400803 MS.gene09713:CDS
ATCCGCCTAAGTTTAAGCGT+CGG 0.622802 5.2:+5400307 MS.gene09713:CDS
ATGAACATCGTTAAGGTCGA+GGG 0.623227 5.2:+5401485 MS.gene09713:CDS
CACTCATCCTGGCTGAGACG+GGG 0.624068 5.2:-5401269 None:intergenic
TTATCTGATCAAGTGGATGT+GGG 0.624073 5.2:+5400564 MS.gene09713:CDS
GCGTTGAAGATATTTCCTAC+GGG 0.625923 5.2:+5402632 MS.gene09713:CDS
GGCCCACACTCATAGACTAG+AGG 0.626323 5.2:-5402877 None:intergenic
CAAATGTGAAAGAATCAAAG+AGG 0.632909 5.2:+5402035 MS.gene09713:CDS
ACTTGATCAGATAAGACCGC+AGG 0.635516 5.2:-5400555 None:intergenic
TTGTCCAATATCAATATAGG+TGG 0.635936 5.2:+5401146 MS.gene09713:CDS
TGCTTTGAAGAATAGTAGCG+AGG 0.636465 5.2:+5402387 MS.gene09713:CDS
CCTGCAGAACTGGCATTGGT+CGG 0.637297 5.2:+5401002 MS.gene09713:CDS
TAAGTCATCAGCATAGCCCC+CGG 0.637423 5.2:-5402269 None:intergenic
ACTTGATGAGATGAGACCAC+AGG 0.643420 5.2:-5400687 None:intergenic
AAAACTGCGACCAAGTCCAA+AGG 0.643866 5.2:+5401716 MS.gene09713:CDS
CATGGGTCAATTAGTAACAC+GGG 0.644532 5.2:+5401802 MS.gene09713:CDS
TCGTAAGTCAGCTCTTGCAA+GGG 0.649908 5.2:-5403357 None:intergenic
AAATGTGAAAGAATCAAAGA+GGG 0.651541 5.2:+5402036 MS.gene09713:CDS
ACGAGTGTTGAGGTTAAGAG+TGG 0.652765 5.2:+5400390 MS.gene09713:CDS
GATCAAGTTCGTGATTCCGA+TGG 0.655471 5.2:+5403396 MS.gene09713:CDS
ATATATTGGAGAGGTTCTTG+AGG 0.657084 5.2:+5403041 MS.gene09713:CDS
GACACTGTTGAACAAACAAG+TGG 0.662787 5.2:+5400510 MS.gene09713:CDS
CCTGCAAAAGTGAAATTGGT+GGG 0.664824 5.2:+5400606 MS.gene09713:CDS
GATCATGGGATCTGTTCCTG+GGG 0.665855 5.2:+5402120 MS.gene09713:CDS
ACCTGCAAAAGTGAAATTGG+TGG 0.666568 5.2:+5400605 MS.gene09713:CDS
GCCAAGTCAGAATGTCCTTG+GGG 0.668770 5.2:+5401593 MS.gene09713:CDS
ACATGGGTCAATTAGTAACA+CGG 0.669242 5.2:+5401801 MS.gene09713:CDS
AAGAGTGGTGAAGATTTAGG+TGG 0.670342 5.2:+5400405 MS.gene09713:CDS
CTTAAATTACTACGACCAAG+AGG 0.670569 5.2:-5401905 None:intergenic
TTTGAAGAAGGAGGATCCTG+CGG 0.671937 5.2:+5400539 MS.gene09713:CDS
CAGTGGCCCGGAATAAAGTG+AGG 0.675048 5.2:+5401945 MS.gene09713:CDS
GTTCTGTGGAATGTACTGGT+AGG 0.675695 5.2:+5403448 MS.gene09713:CDS
AATTCTAGTTCTGATGACAT+GGG 0.681067 5.2:+5401785 MS.gene09713:CDS
GGTGGTACAGATGACAGGAA+GGG 0.684498 5.2:+5401656 MS.gene09713:CDS
GCAGCAAATAACATGACATG+AGG 0.684985 5.2:-5403321 None:intergenic
TTGATATATACAGGGCAGGG+TGG 0.688777 5.2:+5402307 MS.gene09713:CDS
TTATGATCACCATGACAACA+GGG 0.689712 5.2:+5403296 MS.gene09713:CDS
TGGCTGTAGTTTGAAGAAGG+AGG 0.691363 5.2:+5400530 MS.gene09713:CDS
GATACGGGGATCTGAATCAG+CGG 0.692287 5.2:+5402429 MS.gene09713:CDS
TGGTCATGAGAGTGACTCAG+TGG 0.696808 5.2:+5401928 MS.gene09713:CDS
GAAGATCAGAAGCTTGAACG+GGG 0.698030 5.2:+5402358 MS.gene09713:CDS
AAAAGTGTCCCAAAACCACG+TGG 0.710733 5.2:+5401866 MS.gene09713:CDS
CCCTACATTACCGAACTGAG+CGG 0.715373 5.2:-5403223 None:intergenic
GCATTGCGTCCACATAAACG+TGG 0.716479 5.2:-5401245 None:intergenic
TTATAAACCAGCTTCCCATG+TGG 0.718258 5.2:-5402520 None:intergenic
GAACAAATATCAGATCCCCA+AGG 0.723725 5.2:-5401608 None:intergenic
GTACACAAGAACATTTCTCG+TGG 0.725371 5.2:-5402798 None:intergenic
CTTCATCGCCAGATTCAGGG+TGG 0.729437 5.2:+5402193 MS.gene09713:CDS
AAAACATTTACATAACCACG+TGG 0.753070 5.2:-5401881 None:intergenic
AATTCTGTTAGGGTGATACG+GGG 0.761052 5.2:+5402415 MS.gene09713:CDS
ATTCTGGGCATAGAGATTGG+GGG 0.768685 5.2:-5403268 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTTAGTTATGTATTTAAA+TGG - chr5.2:5402712-5402731 None:intergenic 15.0%
!!! ATAAGATAAATCTTGTTTTA+CGG - chr5.2:5401066-5401085 None:intergenic 15.0%
!! AAAAAGTTCAAAAAAAGAGA+AGG + chr5.2:5402604-5402623 MS.gene09713:CDS 20.0%
!! AGAATAGAGCTTAATATAAT+TGG + chr5.2:5402169-5402188 MS.gene09713:CDS 20.0%
!! AGATTTATCTTATATATCAG+AGG + chr5.2:5401073-5401092 MS.gene09713:CDS 20.0%
!! TAGTTATGTATTTAAATGGA+GGG - chr5.2:5402708-5402727 None:intergenic 20.0%
!! TTAGTTATGTATTTAAATGG+AGG - chr5.2:5402709-5402728 None:intergenic 20.0%
!! TTATATGAAGCAAAAAAACA+AGG + chr5.2:5402222-5402241 MS.gene09713:CDS 20.0%
!!! AAGTGTTTGTTATTTTCATT+AGG - chr5.2:5401845-5401864 None:intergenic 20.0%
!!! AATTTTTAAAACCAAGTCAA+TGG + chr5.2:5402966-5402985 MS.gene09713:CDS 20.0%
!!! AGTTTTATCTGTGAATATAT+TGG + chr5.2:5403027-5403046 MS.gene09713:CDS 20.0%
!!! ATTTTTAAAACCAAGTCAAT+GGG + chr5.2:5402967-5402986 MS.gene09713:CDS 20.0%
!!! TTTTCTCTTTTCTTTTTCAA+CGG - chr5.2:5401767-5401786 None:intergenic 20.0%
! AAATGTGAAAGAATCAAAGA+GGG + chr5.2:5402036-5402055 MS.gene09713:CDS 25.0%
! AAATTTAAACCAACATCCAT+TGG + chr5.2:5401635-5401654 MS.gene09713:CDS 25.0%
! ACAAAAACAACAGTAATCTT+TGG + chr5.2:5403121-5403140 MS.gene09713:CDS 25.0%
! ACAAGCTTCAAAAATACTTA+AGG + chr5.2:5402066-5402085 MS.gene09713:CDS 25.0%
! AGTTATGTATTTAAATGGAG+GGG - chr5.2:5402707-5402726 None:intergenic 25.0%
! ATAGCTCCATTATGATTAAA+TGG - chr5.2:5402844-5402863 None:intergenic 25.0%
! CAAAAACAACAGTAATCTTT+GGG + chr5.2:5403122-5403141 MS.gene09713:CDS 25.0%
! CAAAAATACTTAAGGAGAAA+GGG + chr5.2:5402074-5402093 MS.gene09713:CDS 25.0%
! GAGATTCCATTTAATCATAA+TGG + chr5.2:5402835-5402854 MS.gene09713:CDS 25.0%
! TATATTGATATTGGACAATG+AGG - chr5.2:5401144-5401163 None:intergenic 25.0%
! TCAAAAATACTTAAGGAGAA+AGG + chr5.2:5402073-5402092 MS.gene09713:CDS 25.0%
! TCATTGTCCAATATCAATAT+AGG + chr5.2:5401143-5401162 MS.gene09713:CDS 25.0%
! TCTTCGTTATTATCCAAAAT+AGG - chr5.2:5400852-5400871 None:intergenic 25.0%
!! AACATTCTGAAGAAGAATTA+GGG + chr5.2:5400247-5400266 MS.gene09713:CDS 25.0%
!! GATGAGTATCTTTTTGATAT+TGG + chr5.2:5403093-5403112 MS.gene09713:CDS 25.0%
!! TATGTAAATGTTTTTCCTCT+TGG + chr5.2:5401890-5401909 MS.gene09713:CDS 25.0%
!! TCATTGAACTCAAAATTTTG+AGG - chr5.2:5400474-5400493 None:intergenic 25.0%
!! TTTCTTTTTGATATTGCCAT+CGG - chr5.2:5403415-5403434 None:intergenic 25.0%
!!! AAAAAGAAATACTGCTTTTG+TGG + chr5.2:5403426-5403445 MS.gene09713:CDS 25.0%
!!! AATGGATGTTGGTTTAAATT+TGG - chr5.2:5401636-5401655 None:intergenic 25.0%
!!! ATGGATGTTGGTTTAAATTT+GGG - chr5.2:5401635-5401654 None:intergenic 25.0%
!!! CAGATGTTTTGATATATACA+GGG + chr5.2:5402299-5402318 MS.gene09713:CDS 25.0%
AAAACATTTACATAACCACG+TGG - chr5.2:5401884-5401903 None:intergenic 30.0%
AAAATCAGCTTCAACAAAGT+TGG - chr5.2:5401372-5401391 None:intergenic 30.0%
AAAGGCTGTAATTGTACTAA+TGG + chr5.2:5402766-5402785 MS.gene09713:CDS 30.0%
AAGGTGTACTAAATCATTCT+GGG + chr5.2:5401735-5401754 MS.gene09713:CDS 30.0%
AATATCAATATAGGTGGTTC+CGG + chr5.2:5401152-5401171 MS.gene09713:CDS 30.0%
AGAACTTGAAAGTAGTTTGA+AGG + chr5.2:5401535-5401554 MS.gene09713:CDS 30.0%
AGAATGATTTAGTACACCTT+TGG - chr5.2:5401735-5401754 None:intergenic 30.0%
AGCAAGATATATGTTTACGA+TGG + chr5.2:5402460-5402479 MS.gene09713:CDS 30.0%
CAAATGTGAAAGAATCAAAG+AGG + chr5.2:5402035-5402054 MS.gene09713:CDS 30.0%
CTGACTCTATTATAACAAGT+TGG - chr5.2:5402919-5402938 None:intergenic 30.0%
GATATGGAATTTACAACAGA+AGG + chr5.2:5401038-5401057 MS.gene09713:CDS 30.0%
GTTATGTATTTAAATGGAGG+GGG - chr5.2:5402706-5402725 None:intergenic 30.0%
GTTCTTGTGTACTCAAAAAT+GGG + chr5.2:5402809-5402828 MS.gene09713:CDS 30.0%
GTTGAATATTTATGCCAAGT+TGG - chr5.2:5402942-5402961 None:intergenic 30.0%
TAATCATCATCAGGTTAAAG+TGG + chr5.2:5401457-5401476 MS.gene09713:CDS 30.0%
TATCTGTGAATATATTGGAG+AGG + chr5.2:5403032-5403051 MS.gene09713:CDS 30.0%
TCAAATTGATGAGTCTACTT+TGG + chr5.2:5400968-5400987 MS.gene09713:CDS 30.0%
TCTATGAAGTTGAGTCATAT+TGG + chr5.2:5402485-5402504 MS.gene09713:CDS 30.0%
TGTTCTTGTGTACTCAAAAA+TGG + chr5.2:5402808-5402827 MS.gene09713:CDS 30.0%
TTATGTATTTAAATGGAGGG+GGG - chr5.2:5402705-5402724 None:intergenic 30.0%
TTCTTGTGTACTCAAAAATG+GGG + chr5.2:5402810-5402829 MS.gene09713:CDS 30.0%
TTGTCCAATATCAATATAGG+TGG + chr5.2:5401146-5401165 MS.gene09713:CDS 30.0%
! AAAGGTGTACTAAATCATTC+TGG + chr5.2:5401734-5401753 MS.gene09713:CDS 30.0%
! ACTCTATTATAACAAGTTGG+AGG - chr5.2:5402916-5402935 None:intergenic 30.0%
! ATGTTTTCCTCACTTTATTC+CGG - chr5.2:5401955-5401974 None:intergenic 30.0%
! CTCTATTATAACAAGTTGGA+GGG - chr5.2:5402915-5402934 None:intergenic 30.0%
! GAACATTCTGAAGAAGAATT+AGG + chr5.2:5400246-5400265 MS.gene09713:CDS 30.0%
! GATTCTTTCACATTTGACTT+TGG - chr5.2:5402031-5402050 None:intergenic 30.0%
! TCAAGTGGATGGTTATATTT+TGG + chr5.2:5400704-5400723 MS.gene09713:CDS 30.0%
! TTAGTACAATTACAGCCTTT+TGG - chr5.2:5402766-5402785 None:intergenic 30.0%
!! AAATTCTAGTTCTGATGACA+TGG + chr5.2:5401784-5401803 MS.gene09713:CDS 30.0%
!! AATTCTAGTTCTGATGACAT+GGG + chr5.2:5401785-5401804 MS.gene09713:CDS 30.0%
!! TCAAACTACTTTCAAGTTCT+GGG - chr5.2:5401535-5401554 None:intergenic 30.0%
!! TGGATGTTGGTTTAAATTTG+GGG - chr5.2:5401634-5401653 None:intergenic 30.0%
!! TTCAAACTACTTTCAAGTTC+TGG - chr5.2:5401536-5401555 None:intergenic 30.0%
!! TTGTTGAAGCTGATTTTGAA+GGG + chr5.2:5401375-5401394 MS.gene09713:CDS 30.0%
!! TTTGTTGAAGCTGATTTTGA+AGG + chr5.2:5401374-5401393 MS.gene09713:CDS 30.0%
!!! GCAGATGTTTTGATATATAC+AGG + chr5.2:5402298-5402317 MS.gene09713:CDS 30.0%
!!! TGTTATTTTCTGCTTCTTGT+AGG - chr5.2:5401337-5401356 None:intergenic 30.0%
AAAGCTTTCTACAAACAGCT+TGG - chr5.2:5401988-5402007 None:intergenic 35.0%
AAAGGGAGCTATGTTAATGA+AGG + chr5.2:5402091-5402110 MS.gene09713:CDS 35.0%
AAGCAACAATACTAGTTGCA+AGG - chr5.2:5402249-5402268 None:intergenic 35.0%
AAGGGAGCTATGTTAATGAA+GGG + chr5.2:5402092-5402111 MS.gene09713:CDS 35.0%
AATTGATGAGATGAGACCAT+GGG - chr5.2:5400822-5400841 None:intergenic 35.0%
ACATGGGTCAATTAGTAACA+CGG + chr5.2:5401801-5401820 MS.gene09713:CDS 35.0%
AGAATTCTGTTAGGGTGATA+CGG + chr5.2:5402413-5402432 MS.gene09713:CDS 35.0%
AGATACAAAACTGACATTGG+TGG + chr5.2:5400869-5400888 MS.gene09713:CDS 35.0%
AGTGAAGTAGTGAATGATGT+TGG + chr5.2:5403186-5403205 MS.gene09713:CDS 35.0%
ATATATTGGAGAGGTTCTTG+AGG + chr5.2:5403041-5403060 MS.gene09713:CDS 35.0%
ATTTAGTACACCTTTGGACT+TGG - chr5.2:5401729-5401748 None:intergenic 35.0%
CACAGATAAAACTTCCAGAA+GGG - chr5.2:5403020-5403039 None:intergenic 35.0%
CGAAGATACAAAACTGACAT+TGG + chr5.2:5400866-5400885 MS.gene09713:CDS 35.0%
CTTAAATTACTACGACCAAG+AGG - chr5.2:5401908-5401927 None:intergenic 35.0%
CTTGGTCGTAGTAATTTAAG+TGG + chr5.2:5401908-5401927 MS.gene09713:CDS 35.0%
GATACAAAACTGACATTGGT+GGG + chr5.2:5400870-5400889 MS.gene09713:CDS 35.0%
GGAAAACATGAACATCGTTA+AGG + chr5.2:5401478-5401497 MS.gene09713:CDS 35.0%
GGAACCACCTATATTGATAT+TGG - chr5.2:5401153-5401172 None:intergenic 35.0%
GTGATCATAAAGGACATTCT+GGG - chr5.2:5403286-5403305 None:intergenic 35.0%
GTTAAGAGTGGTGAAGATTT+AGG + chr5.2:5400402-5400421 MS.gene09713:CDS 35.0%
TAAAACCAAGTCAATGGGAT+GGG + chr5.2:5402972-5402991 MS.gene09713:CDS 35.0%
TAACGATGAAGCTTCAAAAG+TGG + chr5.2:5400728-5400747 MS.gene09713:CDS 35.0%
TATAATAGAGTCAGCCAACT+TGG + chr5.2:5402925-5402944 MS.gene09713:CDS 35.0%
TCACAGATAAAACTTCCAGA+AGG - chr5.2:5403021-5403040 None:intergenic 35.0%
TCATCACAAACCAACATTGA+TGG - chr5.2:5400228-5400247 None:intergenic 35.0%
TCTTGTGTACTCAAAAATGG+GGG + chr5.2:5402811-5402830 MS.gene09713:CDS 35.0%
TGAACCTGCAAAAGTGAAAT+TGG + chr5.2:5400602-5400621 MS.gene09713:CDS 35.0%
TGAAGACTGTAGCTTGAAAA+AGG + chr5.2:5400659-5400678 MS.gene09713:CDS 35.0%
TGAAGCTTCAAAAGTGGAAT+TGG + chr5.2:5400734-5400753 MS.gene09713:CDS 35.0%
TGTTGTCATGGTGATCATAA+AGG - chr5.2:5403296-5403315 None:intergenic 35.0%
TTAAAACCAAGTCAATGGGA+TGG + chr5.2:5402971-5402990 MS.gene09713:CDS 35.0%
TTATCTGATCAAGTGGATGT+GGG + chr5.2:5400564-5400583 MS.gene09713:CDS 35.0%
TTATGATCACCATGACAACA+GGG + chr5.2:5403296-5403315 MS.gene09713:CDS 35.0%
TTTAAACCAACATCCATTGG+TGG + chr5.2:5401638-5401657 MS.gene09713:CDS 35.0%
TTTATGATCACCATGACAAC+AGG + chr5.2:5403295-5403314 MS.gene09713:CDS 35.0%
! AACAACAGTAATCTTTGGGA+TGG + chr5.2:5403126-5403145 MS.gene09713:CDS 35.0%
! AGAGATTTTCCACGTTTATG+TGG + chr5.2:5401236-5401255 MS.gene09713:CDS 35.0%
! ATCTTATATATCAGAGGCAC+CGG + chr5.2:5401079-5401098 MS.gene09713:CDS 35.0%
! TACAATTACAGCCTTTTGGA+GGG - chr5.2:5402762-5402781 None:intergenic 35.0%
! TCAATTGGATGTGCCTATTT+TGG + chr5.2:5400836-5400855 MS.gene09713:CDS 35.0%
! TGAAGGAGGCTTTAACTAAA+AGG + chr5.2:5401183-5401202 MS.gene09713:CDS 35.0%
! TGTTTGTAGAAAGCTTTTGC+AGG + chr5.2:5401991-5402010 MS.gene09713:CDS 35.0%
! TGTTTTCCTCACTTTATTCC+GGG - chr5.2:5401954-5401973 None:intergenic 35.0%
! TTACATAACCACGTGGTTTT+GGG - chr5.2:5401877-5401896 None:intergenic 35.0%
! TTTACATAACCACGTGGTTT+TGG - chr5.2:5401878-5401897 None:intergenic 35.0%
!! GGATGTTGGTTTAAATTTGG+GGG - chr5.2:5401633-5401652 None:intergenic 35.0%
!! GTTTTGATATATACAGGGCA+GGG + chr5.2:5402304-5402323 MS.gene09713:CDS 35.0%
!!! TGTTTTGATATATACAGGGC+AGG + chr5.2:5402303-5402322 MS.gene09713:CDS 35.0%
AAAACCAAGTCAATGGGATG+GGG + chr5.2:5402973-5402992 MS.gene09713:CDS 40.0%
AAGAGTGGTGAAGATTTAGG+TGG + chr5.2:5400405-5400424 MS.gene09713:CDS 40.0%
AAGGAAGCTGAACAAAGAAC+TGG + chr5.2:5403066-5403085 MS.gene09713:CDS 40.0%
AAGTGGCTGTAGTTTGAAGA+AGG + chr5.2:5400527-5400546 MS.gene09713:CDS 40.0%
AATCTATACCACCCTGAATC+TGG - chr5.2:5402204-5402223 None:intergenic 40.0%
AATGAAGGGGAGAAGATCAT+GGG + chr5.2:5402106-5402125 MS.gene09713:CDS 40.0%
AATTCTGTTAGGGTGATACG+GGG + chr5.2:5402415-5402434 MS.gene09713:CDS 40.0%
ACATTCTGGGCATAGAGATT+GGG - chr5.2:5403273-5403292 None:intergenic 40.0%
ACCATCTACTGAGATGAGAT+TGG + chr5.2:5401427-5401446 MS.gene09713:CDS 40.0%
ACCTGCAAAAGTGAAATTGG+TGG + chr5.2:5400605-5400624 MS.gene09713:CDS 40.0%
ACTTTCCGACGCTTAAACTT+AGG - chr5.2:5400315-5400334 None:intergenic 40.0%
AGAAGATCAGAAGCTTGAAC+GGG + chr5.2:5402357-5402376 MS.gene09713:CDS 40.0%
AGCTTCAAAAGTGGAATTGG+TGG + chr5.2:5400737-5400756 MS.gene09713:CDS 40.0%
AGGGAGCTATGTTAATGAAG+GGG + chr5.2:5402093-5402112 MS.gene09713:CDS 40.0%
AGTCATATTGGCAGGATATG+GGG + chr5.2:5402497-5402516 MS.gene09713:CDS 40.0%
ATGAACATCGTTAAGGTCGA+GGG + chr5.2:5401485-5401504 MS.gene09713:CDS 40.0%
ATGGTGTTCACAGCACATAT+GGG - chr5.2:5402670-5402689 None:intergenic 40.0%
CAATTGATGAGATGAGACCA+TGG - chr5.2:5400823-5400842 None:intergenic 40.0%
CAGAAGATCAGAAGCTTGAA+CGG + chr5.2:5402356-5402375 MS.gene09713:CDS 40.0%
CATGGGTCAATTAGTAACAC+GGG + chr5.2:5401802-5401821 MS.gene09713:CDS 40.0%
CATGGTCTCATCTCATCAAT+TGG + chr5.2:5400821-5400840 MS.gene09713:CDS 40.0%
CCTGCAAAAGTGAAATTGGT+GGG + chr5.2:5400606-5400625 MS.gene09713:CDS 40.0%
CGAGGTCAAGAATTCTGTTA+GGG + chr5.2:5402405-5402424 MS.gene09713:CDS 40.0%
CGCGTTGAAGATATTTCCTA+CGG + chr5.2:5402631-5402650 MS.gene09713:CDS 40.0%
CGGTATGGAAACTTCAGATA+TGG + chr5.2:5401022-5401041 MS.gene09713:CDS 40.0%
CTTATCTGATCAAGTGGATG+TGG + chr5.2:5400563-5400582 MS.gene09713:CDS 40.0%
CTTGAAAAAGGAAGATCCTG+TGG + chr5.2:5400671-5400690 MS.gene09713:CDS 40.0%
CTTGTGTACTCAAAAATGGG+GGG + chr5.2:5402812-5402831 MS.gene09713:CDS 40.0%
GAAAGTAGTGCTAGGTTTGA+TGG + chr5.2:5401571-5401590 MS.gene09713:CDS 40.0%
GAACAAATATCAGATCCCCA+AGG - chr5.2:5401611-5401630 None:intergenic 40.0%
GAATTCTGTTAGGGTGATAC+GGG + chr5.2:5402414-5402433 MS.gene09713:CDS 40.0%
GACACTGTTGAACAAACAAG+TGG + chr5.2:5400510-5400529 MS.gene09713:CDS 40.0%
GAGTCATATTGGCAGGATAT+GGG + chr5.2:5402496-5402515 MS.gene09713:CDS 40.0%
GAGTCTACTTTGGCAAATGA+CGG + chr5.2:5400978-5400997 MS.gene09713:CDS 40.0%
GATAAAACTTCCAGAAGGGA+TGG - chr5.2:5403016-5403035 None:intergenic 40.0%
GCAGCAAATAACATGACATG+AGG - chr5.2:5403324-5403343 None:intergenic 40.0%
GCGTTGAAGATATTTCCTAC+GGG + chr5.2:5402632-5402651 MS.gene09713:CDS 40.0%
GCTTCAAAAGTGGAATTGGT+GGG + chr5.2:5400738-5400757 MS.gene09713:CDS 40.0%
GGGACAATATTGCAACAATC+AGG - chr5.2:5402742-5402761 None:intergenic 40.0%
GGTGATCATAAAGGACATTC+TGG - chr5.2:5403287-5403306 None:intergenic 40.0%
GTACACAAGAACATTTCTCG+TGG - chr5.2:5402801-5402820 None:intergenic 40.0%
TAATGAAGGGGAGAAGATCA+TGG + chr5.2:5402105-5402124 MS.gene09713:CDS 40.0%
TATGGTGTTCACAGCACATA+TGG - chr5.2:5402671-5402690 None:intergenic 40.0%
TGAAGACTGTAGCTTGAGAA+AGG + chr5.2:5400791-5400810 MS.gene09713:CDS 40.0%
TGAAGTTGAGTCATATTGGC+AGG + chr5.2:5402489-5402508 MS.gene09713:CDS 40.0%
TGAGTCATATTGGCAGGATA+TGG + chr5.2:5402495-5402514 MS.gene09713:CDS 40.0%
TGCAATATTGTCCCTCCAAA+AGG + chr5.2:5402748-5402767 MS.gene09713:CDS 40.0%
TTATAAACCAGCTTCCCATG+TGG - chr5.2:5402523-5402542 None:intergenic 40.0%
TTCTACAAACAGCTTGGAAC+AGG - chr5.2:5401982-5402001 None:intergenic 40.0%
TTGTGTACTCAAAAATGGGG+GGG + chr5.2:5402813-5402832 MS.gene09713:CDS 40.0%
! AACTAGTATTGTTGCTTCCG+GGG + chr5.2:5402252-5402271 MS.gene09713:CDS 40.0%
! AGATTTAGGTGGTGGTGATT+CGG + chr5.2:5400416-5400435 MS.gene09713:CDS 40.0%
! CAACTAGTATTGTTGCTTCC+GGG + chr5.2:5402251-5402270 MS.gene09713:CDS 40.0%
! GCAACTAGTATTGTTGCTTC+CGG + chr5.2:5402250-5402269 MS.gene09713:CDS 40.0%
! GTACAATTACAGCCTTTTGG+AGG - chr5.2:5402763-5402782 None:intergenic 40.0%
! TAGAAAGCTTTTGCAGGAAG+CGG + chr5.2:5401997-5402016 MS.gene09713:CDS 40.0%
! TTCTGCTGTTCGTGATTTTC+CGG + chr5.2:5400335-5400354 MS.gene09713:CDS 40.0%
!! AGCTGATTTTGAAGGGAATG+CGG + chr5.2:5401382-5401401 MS.gene09713:CDS 40.0%
!! AGTTGATTTTTATGCCCACC+TGG + chr5.2:5401685-5401704 MS.gene09713:CDS 40.0%
!! ATACTGCTTTTGTGGTTCTG+TGG + chr5.2:5403434-5403453 MS.gene09713:CDS 40.0%
!! TGCTTTGAAGAATAGTAGCG+AGG + chr5.2:5402387-5402406 MS.gene09713:CDS 40.0%
!!! AACGCTGCAACTTTTTTACG+AGG - chr5.2:5401215-5401234 None:intergenic 40.0%
!!! CTCTTTTCTTTTTCAACGGC+TGG - chr5.2:5401763-5401782 None:intergenic 40.0%
AAAACTGCGACCAAGTCCAA+AGG + chr5.2:5401716-5401735 MS.gene09713:CDS 45.0%
AAGATCATGGGATCTGTTCC+TGG + chr5.2:5402118-5402137 MS.gene09713:CDS 45.0%
AAGCCTCTAGTCTATGAGTG+TGG + chr5.2:5402874-5402893 MS.gene09713:CDS 45.0%
ACTTGATCAGATAAGACCGC+AGG - chr5.2:5400558-5400577 None:intergenic 45.0%
ACTTGATGAGATGAGACCAC+AGG - chr5.2:5400690-5400709 None:intergenic 45.0%
AGAATTAGGGAAGCCAGTGA+TGG + chr5.2:5400260-5400279 MS.gene09713:CDS 45.0%
AGATCATGGGATCTGTTCCT+GGG + chr5.2:5402119-5402138 MS.gene09713:CDS 45.0%
AGCCTCTAGTCTATGAGTGT+GGG + chr5.2:5402875-5402894 MS.gene09713:CDS 45.0%
AGTAGTTTGAAGGTCTCACC+AGG + chr5.2:5401545-5401564 MS.gene09713:CDS 45.0%
AGTGGTGAAGATTTAGGTGG+TGG + chr5.2:5400408-5400427 MS.gene09713:CDS 45.0%
ATCCGCCTAAGTTTAAGCGT+CGG + chr5.2:5400307-5400326 MS.gene09713:CDS 45.0%
ATCGTAAGTCAGCTCTTGCA+AGG - chr5.2:5403361-5403380 None:intergenic 45.0%
ATTCTGGGCATAGAGATTGG+GGG - chr5.2:5403271-5403290 None:intergenic 45.0%
CATGAACATCGTTAAGGTCG+AGG + chr5.2:5401484-5401503 MS.gene09713:CDS 45.0%
CATTCTGGGCATAGAGATTG+GGG - chr5.2:5403272-5403291 None:intergenic 45.0%
CCAAATGGTCCACATTCTTC+CGG - chr5.2:5400357-5400376 None:intergenic 45.0%
CGTTCAAGCTTCTGATCTTC+TGG - chr5.2:5402358-5402377 None:intergenic 45.0%
CTTGAACTTGAGTGCGAATC+TGG - chr5.2:5403168-5403187 None:intergenic 45.0%
CTTGAGAAAGGAAGATCCCA+TGG + chr5.2:5400803-5400822 MS.gene09713:CDS 45.0%
GAAGATCAGAAGCTTGAACG+GGG + chr5.2:5402358-5402377 MS.gene09713:CDS 45.0%
GAATTCGGAGCCATCAATGT+TGG + chr5.2:5400215-5400234 MS.gene09713:CDS 45.0%
GACATTCTGGGCATAGAGAT+TGG - chr5.2:5403274-5403293 None:intergenic 45.0%
GAGTCTCCATTTACCATCAC+TGG - chr5.2:5400276-5400295 None:intergenic 45.0%
GATCAAGTTCGTGATTCCGA+TGG + chr5.2:5403396-5403415 MS.gene09713:CDS 45.0%
GCCAATCTCATCTCAGTAGA+TGG - chr5.2:5401431-5401450 None:intergenic 45.0%
GCGAGGTCAAGAATTCTGTT+AGG + chr5.2:5402404-5402423 MS.gene09713:CDS 45.0%
GGAAGCTGTGGATATGGAAT+TGG + chr5.2:5400764-5400783 MS.gene09713:CDS 45.0%
GTACCATCAGCAGAACCAAA+TGG - chr5.2:5400372-5400391 None:intergenic 45.0%
GTCTCATCTCATCAAGTGGA+TGG + chr5.2:5400693-5400712 MS.gene09713:CDS 45.0%
TACTGAGATGAGATTGGCAC+TGG + chr5.2:5401433-5401452 MS.gene09713:CDS 45.0%
TCCAGAAGGGATGGAATTCA+AGG - chr5.2:5403007-5403026 None:intergenic 45.0%
TCCTTGAATTCCATCCCTTC+TGG + chr5.2:5403003-5403022 MS.gene09713:CDS 45.0%
TCGTAAGTCAGCTCTTGCAA+GGG - chr5.2:5403360-5403379 None:intergenic 45.0%
TCTGTACCACCAATGGATGT+TGG - chr5.2:5401647-5401666 None:intergenic 45.0%
TGATAGTCCCAACGACGAAA+AGG + chr5.2:5400446-5400465 MS.gene09713:CDS 45.0%
TGGCTGTAGTTTGAAGAAGG+AGG + chr5.2:5400530-5400549 MS.gene09713:CDS 45.0%
TGTGGTCTCATCTCATCAAG+TGG + chr5.2:5400689-5400708 MS.gene09713:CDS 45.0%
TTCCGACGCTTAAACTTAGG+CGG - chr5.2:5400312-5400331 None:intergenic 45.0%
TTGAGTGCGAATCTGGCAAA+AGG - chr5.2:5403161-5403180 None:intergenic 45.0%
TTGATATATACAGGGCAGGG+TGG + chr5.2:5402307-5402326 MS.gene09713:CDS 45.0%
TTTGAAGAAGGAGGATCCTG+CGG + chr5.2:5400539-5400558 MS.gene09713:CDS 45.0%
! AAAACTGACATTGGTGGGCA+TGG + chr5.2:5400875-5400894 MS.gene09713:CDS 45.0%
! AAAAGTGGAATTGGTGGGCA+TGG + chr5.2:5400743-5400762 MS.gene09713:CDS 45.0%
! ACTAGTATTGTTGCTTCCGG+GGG + chr5.2:5402253-5402272 MS.gene09713:CDS 45.0%
! ATTTTTATGCCCACCTGGAC+AGG + chr5.2:5401690-5401709 MS.gene09713:CDS 45.0%
! CACTTTTGCAGGTTCATCGT+TGG - chr5.2:5400598-5400617 None:intergenic 45.0%
! CGTGATTTTCCGGAAGAATG+TGG + chr5.2:5400345-5400364 MS.gene09713:CDS 45.0%
! GATTTAGGTGGTGGTGATTC+GGG + chr5.2:5400417-5400436 MS.gene09713:CDS 45.0%
! GGCACTGGATAATCATCATC+AGG + chr5.2:5401448-5401467 MS.gene09713:CDS 45.0%
! GGGAATTTTCTCTTTCCCGT+AGG - chr5.2:5402650-5402669 None:intergenic 45.0%
! GTTCTGTGGAATGTACTGGT+AGG + chr5.2:5403448-5403467 MS.gene09713:CDS 45.0%
! TGAGGATCCTTTTCGTCGTT+GGG - chr5.2:5400456-5400475 None:intergenic 45.0%
! TGCGGTCTTATCTGATCAAG+TGG + chr5.2:5400557-5400576 MS.gene09713:CDS 45.0%
! TGTGGTTCTGTGGAATGTAC+TGG + chr5.2:5403444-5403463 MS.gene09713:CDS 45.0%
! TTGAGGATCCTTTTCGTCGT+TGG - chr5.2:5400457-5400476 None:intergenic 45.0%
!! AAAAGTGTCCCAAAACCACG+TGG + chr5.2:5401866-5401885 MS.gene09713:CDS 45.0%
!! ACGAGTGTTGAGGTTAAGAG+TGG + chr5.2:5400390-5400409 MS.gene09713:CDS 45.0%
!! CCCACCAATTTCACTTTTGC+AGG - chr5.2:5400609-5400628 None:intergenic 45.0%
!!! AGTTTTAGACCTGTCCAGGT+GGG - chr5.2:5401702-5401721 None:intergenic 45.0%
!!! GCTGCAACTTTTTTACGAGG+AGG - chr5.2:5401212-5401231 None:intergenic 45.0%
ACTATCGATGCCGCTCAGTT+CGG + chr5.2:5403213-5403232 MS.gene09713:CDS 50.0%
AGAGATTGGGGGAGCAACTA+TGG - chr5.2:5403260-5403279 None:intergenic 50.0%
AGCCTCCTTCATACAAGCAC+CGG - chr5.2:5401174-5401193 None:intergenic 50.0%
AGGGGGGTTCTCTTCATCTA+TGG - chr5.2:5402689-5402708 None:intergenic 50.0%
AGTACCTTCCAAGCAAGCTC+TGG - chr5.2:5402574-5402593 None:intergenic 50.0%
CAGCCAGGATGAGTGTCTAA+AGG + chr5.2:5401277-5401296 MS.gene09713:CDS 50.0%
CATGAGGAACCCTGTTGTCA+TGG - chr5.2:5403308-5403327 None:intergenic 50.0%
CCCTACATTACCGAACTGAG+CGG - chr5.2:5403226-5403245 None:intergenic 50.0%
CCGCTCAGTTCGGTAATGTA+GGG + chr5.2:5403223-5403242 MS.gene09713:CDS 50.0%
CCGGAAGAATGTGGACCATT+TGG + chr5.2:5400354-5400373 MS.gene09713:CDS 50.0%
CCTGTCATCTGTACCACCAA+TGG - chr5.2:5401654-5401673 None:intergenic 50.0%
GATACGGGGATCTGAATCAG+CGG + chr5.2:5402429-5402448 MS.gene09713:CDS 50.0%
GATCATGGGATCTGTTCCTG+GGG + chr5.2:5402120-5402139 MS.gene09713:CDS 50.0%
GCATTGCGTCCACATAAACG+TGG - chr5.2:5401248-5401267 None:intergenic 50.0%
GCCAAGTCAGAATGTCCTTG+GGG + chr5.2:5401593-5401612 MS.gene09713:CDS 50.0%
GCTCCTTTAGACACTCATCC+TGG - chr5.2:5401283-5401302 None:intergenic 50.0%
GGAGACTTTGGATGCGGAAT+TGG + chr5.2:5400896-5400915 MS.gene09713:CDS 50.0%
GGCCAAGTCAGAATGTCCTT+GGG + chr5.2:5401592-5401611 MS.gene09713:CDS 50.0%
GGGAAGCCAGTGATGGTAAA+TGG + chr5.2:5400267-5400286 MS.gene09713:CDS 50.0%
GGTGGTACAGATGACAGGAA+GGG + chr5.2:5401656-5401675 MS.gene09713:CDS 50.0%
GTTTCGCTTGCGAAGAAAGC+CGG + chr5.2:5402543-5402562 MS.gene09713:CDS 50.0%
TAAGTCAGCTCTTGCAAGGG+AGG - chr5.2:5403357-5403376 None:intergenic 50.0%
TAAGTCATCAGCATAGCCCC+CGG - chr5.2:5402272-5402291 None:intergenic 50.0%
TCATCACCAACTTCAACCCC+AGG - chr5.2:5402139-5402158 None:intergenic 50.0%
TCCCCAAGGACATTCTGACT+TGG - chr5.2:5401597-5401616 None:intergenic 50.0%
TCTGTTCCTGGGGTTGAAGT+TGG + chr5.2:5402130-5402149 MS.gene09713:CDS 50.0%
TGGAGAGGTTCTTGAGGACA+AGG + chr5.2:5403047-5403066 MS.gene09713:CDS 50.0%
TGGCCAAGTCAGAATGTCCT+TGG + chr5.2:5401591-5401610 MS.gene09713:CDS 50.0%
TGGTCATGAGAGTGACTCAG+TGG + chr5.2:5401928-5401947 MS.gene09713:CDS 50.0%
TGGTGGTACAGATGACAGGA+AGG + chr5.2:5401655-5401674 MS.gene09713:CDS 50.0%
TGGTTCCGGTGCTTGTATGA+AGG + chr5.2:5401166-5401185 MS.gene09713:CDS 50.0%
TTCCGGTGCTTGTATGAAGG+AGG + chr5.2:5401169-5401188 MS.gene09713:CDS 50.0%
TTTCGCTTGCGAAGAAAGCC+GGG + chr5.2:5402544-5402563 MS.gene09713:CDS 50.0%
! ATTGGTGGGCATGGAGACTT+TGG + chr5.2:5400884-5400903 MS.gene09713:CDS 50.0%
! ATTGGTGGGCGTAGAAGCTA+TGG + chr5.2:5400620-5400639 MS.gene09713:CDS 50.0%
! CCATTGGTGGTACAGATGAC+AGG + chr5.2:5401651-5401670 MS.gene09713:CDS 50.0%
! TACACCCCATCCCATTGACT+TGG - chr5.2:5402980-5402999 None:intergenic 50.0%
! TCAACCAGAGCTTGCTTGGA+AGG + chr5.2:5402567-5402586 MS.gene09713:CDS 50.0%
! TGCTGATGGTACGAGTGTTG+AGG + chr5.2:5400380-5400399 MS.gene09713:CDS 50.0%
!! AAATGACGGACCTGCAGAAC+TGG + chr5.2:5400992-5401011 MS.gene09713:CDS 50.0%
!! AGAACTGGCATTGGTCGGTA+TGG + chr5.2:5401007-5401026 MS.gene09713:CDS 50.0%
!! GGACCATTTGGTTCTGCTGA+TGG + chr5.2:5400366-5400385 MS.gene09713:CDS 50.0%
!! GTTGGAGGGCACTTGCATTT+AGG - chr5.2:5402901-5402920 None:intergenic 50.0%
!!! CAGTTTTAGACCTGTCCAGG+TGG - chr5.2:5401703-5401722 None:intergenic 50.0%
!!! TCGCAGTTTTAGACCTGTCC+AGG - chr5.2:5401706-5401725 None:intergenic 50.0%
ACACTCATCCTGGCTGAGAC+GGG - chr5.2:5401273-5401292 None:intergenic 55.0%
AGGGAATGCGGTCAAGAAGC+TGG + chr5.2:5401394-5401413 MS.gene09713:CDS 55.0%
ATGAGAGTGACTCAGTGGCC+CGG + chr5.2:5401933-5401952 MS.gene09713:CDS 55.0%
CACCCTGAATCTGGCGATGA+AGG - chr5.2:5402195-5402214 None:intergenic 55.0%
CAGTGGCCCGGAATAAAGTG+AGG + chr5.2:5401945-5401964 MS.gene09713:CDS 55.0%
CCAGGCAGGAAAGTAGTGCT+AGG + chr5.2:5401563-5401582 MS.gene09713:CDS 55.0%
CCTAGCACTACTTTCCTGCC+TGG - chr5.2:5401566-5401585 None:intergenic 55.0%
CTTCATCGCCAGATTCAGGG+TGG + chr5.2:5402193-5402212 MS.gene09713:CDS 55.0%
GACACTCATCCTGGCTGAGA+CGG - chr5.2:5401274-5401293 None:intergenic 55.0%
GACATAGCTACCTCGCCAAC+TGG - chr5.2:5401107-5401126 None:intergenic 55.0%
GCCGCTCAGTTCGGTAATGT+AGG + chr5.2:5403222-5403241 MS.gene09713:CDS 55.0%
GGCCCACACTCATAGACTAG+AGG - chr5.2:5402880-5402899 None:intergenic 55.0%
GGCCTTCATCGCCAGATTCA+GGG + chr5.2:5402190-5402209 MS.gene09713:CDS 55.0%
GGGCATGGAAGCTGTGGATA+TGG + chr5.2:5400758-5400777 MS.gene09713:CDS 55.0%
GGGCATGGAGACTTTGGATG+CGG + chr5.2:5400890-5400909 MS.gene09713:CDS 55.0%
GTTTGAAGGTCTCACCAGGC+AGG + chr5.2:5401549-5401568 MS.gene09713:CDS 55.0%
TGGCCTTCATCGCCAGATTC+AGG + chr5.2:5402189-5402208 MS.gene09713:CDS 55.0%
! ATTGGTGGGCATGGAAGCTG+TGG + chr5.2:5400752-5400771 MS.gene09713:CDS 55.0%
! CAAGCAAGCTCTGGTTGACC+CGG - chr5.2:5402565-5402584 None:intergenic 55.0%
!! CCTGCAGAACTGGCATTGGT+CGG + chr5.2:5401002-5401021 MS.gene09713:CDS 55.0%
CACTCATCCTGGCTGAGACG+GGG - chr5.2:5401272-5401291 None:intergenic 60.0%
CCGACCAATGCCAGTTCTGC+AGG - chr5.2:5401005-5401024 None:intergenic 60.0%
CGGACCTGCAGAACTGGCAT+TGG + chr5.2:5400998-5401017 MS.gene09713:CDS 60.0%
CGGGGATCTGAATCAGCGGA+TGG + chr5.2:5402433-5402452 MS.gene09713:CDS 60.0%
GGCAGGATATGGGGCCACAT+GGG + chr5.2:5402506-5402525 MS.gene09713:CDS 60.0%
TATGGGGCCACATGGGAAGC+TGG + chr5.2:5402513-5402532 MS.gene09713:CDS 60.0%
TGGCAGGATATGGGGCCACA+TGG + chr5.2:5402505-5402524 MS.gene09713:CDS 60.0%
! CGGGTCAACCAGAGCTTGCT+TGG + chr5.2:5402563-5402582 MS.gene09713:CDS 60.0%
CAATGCTCCCCGTCTCAGCC+AGG + chr5.2:5401262-5401281 MS.gene09713:CDS 65.0%
GCTACCTCGCCAACTGGAGC+CGG - chr5.2:5401101-5401120 None:intergenic 65.0%
!! TCAGAGGCACCGGCTCCAGT+TGG + chr5.2:5401089-5401108 MS.gene09713:CDS 65.0%
!! GGCACCGGCTCCAGTTGGCG+AGG + chr5.2:5401094-5401113 MS.gene09713:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 5400213 5403479 5400213 ID=MS.gene09713
chr5.2 mRNA 5400213 5403479 5400213 ID=MS.gene09713.t1;Parent=MS.gene09713
chr5.2 exon 5400213 5403479 5400213 ID=MS.gene09713.t1.exon1;Parent=MS.gene09713.t1
chr5.2 CDS 5400213 5403479 5400213 ID=cds.MS.gene09713.t1;Parent=MS.gene09713.t1
Gene Sequence

>MS.gene09713

ATGAATTCGGAGCCATCAATGTTGGTTTGTGATGAACATTCTGAAGAAGAATTAGGGAAGCCAGTGATGGTAAATGGAGACTCAACTATTGTTGATCCGCCTAAGTTTAAGCGTCGGAAAGTTTCTGCTGTTCGTGATTTTCCGGAAGAATGTGGACCATTTGGTTCTGCTGATGGTACGAGTGTTGAGGTTAAGAGTGGTGAAGATTTAGGTGGTGGTGATTCGGGTGAAGCTGATAGTCCCAACGACGAAAAGGATCCTCAAAATTTTGAGTTCAATGAAGATTTGTTTGTTGCAGACACTGTTGAACAAACAAGTGGCTGTAGTTTGAAGAAGGAGGATCCTGCGGTCTTATCTGATCAAGTGGATGTGGGTAGTTTTGCCAACGATGAACCTGCAAAAGTGAAATTGGTGGGCGTAGAAGCTATGGATATTAGTTTTGAAACTGAAGACTGTAGCTTGAAAAAGGAAGATCCTGTGGTCTCATCTCATCAAGTGGATGGTTATATTTTGGTTAACGATGAAGCTTCAAAAGTGGAATTGGTGGGCATGGAAGCTGTGGATATGGAATTGGAAACTGAAGACTGTAGCTTGAGAAAGGAAGATCCCATGGTCTCATCTCATCAATTGGATGTGCCTATTTTGGATAATAACGAAGATACAAAACTGACATTGGTGGGCATGGAGACTTTGGATGCGGAATTGGCAACTGAAAGCTGTAGTTTGAAGAACGAAAATGCAGCGATCTTATCTTATCAAATTGATGAGTCTACTTTGGCAAATGACGGACCTGCAGAACTGGCATTGGTCGGTATGGAAACTTCAGATATGGAATTTACAACAGAAGGCTCCGTAAAACAAGATTTATCTTATATATCAGAGGCACCGGCTCCAGTTGGCGAGGTAGCTATGTCTGATAACTCAAAATCCTCATTGTCCAATATCAATATAGGTGGTTCCGGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATCCTCCTCGTAAAAAAGTTGCAGCGTTAAGAGATTTTCCACGTTTATGTGGACGCAATGCTCCCCGTCTCAGCCAGGATGAGTGTCTAAAGGAGCTCGCTTCTTTGAAAGAAGTTGCAGCTACTGACCTACAAGAAGCAGAAAATAACAAAAGAAAGTTTGCCAACTTTGTTGAAGCTGATTTTGAAGGGAATGCGGTCAAGAAGCTGGATGTAGCTGAACCATCTACTGAGATGAGATTGGCACTGGATAATCATCATCAGGTTAAAGTGGAAAACATGAACATCGTTAAGGTCGAGGGAACATCAGAGCTAGATATTGATTACCCAGAACTTGAAAGTAGTTTGAAGGTCTCACCAGGCAGGAAAGTAGTGCTAGGTTTGATGGCCAAGTCAGAATGTCCTTGGGGATCTGATATTTGTTCCCCCAAATTTAAACCAACATCCATTGGTGGTACAGATGACAGGAAGGGAAAGAAAGTTGATTTTTATGCCCACCTGGACAGGTCTAAAACTGCGACCAAGTCCAAAGGTGTACTAAATCATTCTGGGCACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGATGACATGGGTCAATTAGTAACACGGGAGAAGAATTCTCTAGATCCTAATGAAAATAACAAACACTTTAAAAGTGTCCCAAAACCACGTGGTTATGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTAAGTGGTCATGAGAGTGACTCAGTGGCCCGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCAAGCTGTTTGTAGAAAGCTTTTGCAGGAAGCGGAAGCAAAACCAAAGTCAAATGTGAAAGAATCAAAGAGGGTTGATTTACAAGCTTCAAAAATACTTAAGGAGAAAGGGAGCTATGTTAATGAAGGGGAGAAGATCATGGGATCTGTTCCTGGGGTTGAAGTTGGTGATGAATTTCAATACAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATATGAAGCAAAAAAACAAGGTCCTTGCAACTAGTATTGTTGCTTCCGGGGGCTATGCTGATGACTTAGATAATGCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAGAAGCTTGAACGGGGCAATCTTGCTTTGAAGAATAGTAGCGAGGTCAAGAATTCTGTTAGGGTGATACGGGGATCTGAATCAGCGGATGGAAAAAGCAAGATATATGTTTACGATGGACTCTATGAAGTTGAGTCATATTGGCAGGATATGGGGCCACATGGGAAGCTGGTTTATAAGTTTCGCTTGCGAAGAAAGCCGGGTCAACCAGAGCTTGCTTGGAAGGTACTGAAGAAATCTAAAAAGTTCAAAAAAAGAGAAGGTGTACGCGTTGAAGATATTTCCTACGGGAAAGAGAAAATTCCCATATGTGCTGTGAACACCATAGATGAAGAGAACCCCCCTCCATTTAAATACATAACTAAGATGATGTATCCTGATTGTTGCAATATTGTCCCTCCAAAAGGCTGTAATTGTACTAATGGATGCTCTGACCACGAGAAATGTTCTTGTGTACTCAAAAATGGGGGGGAGATTCCATTTAATCATAATGGAGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGGCCTAAATGCAAGTGCCCTCCAACTTGTTATAATAGAGTCAGCCAACTTGGCATAAATATTCAACTCGAAATTTTTAAAACCAAGTCAATGGGATGGGGTGTAAGATCCTTGAATTCCATCCCTTCTGGAAGTTTTATCTGTGAATATATTGGAGAGGTTCTTGAGGACAAGGAAGCTGAACAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACAAAAACAACAGTAATCTTTGGGATGGACTTTCGAACCTTTTGCCAGATTCGCACTCAAGTTCAAGTGAAGTAGTGAATGATGTTGGCTTCACTATCGATGCCGCTCAGTTCGGTAATGTAGGGAGATTCATTAACCATAGTTGCTCCCCCAATCTCTATGCCCAGAATGTCCTTTATGATCACCATGACAACAGGGTTCCTCATGTCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGATTACAATTACACGATAGATCAAGTTCGTGATTCCGATGGCAATATCAAAAAGAAATACTGCTTTTGTGGTTCTGTGGAATGTACTGGTAGGTTGTATTGA
Protein sequence

>MS.gene09713.t1

MNSEPSMLVCDEHSEEELGKPVMVNGDSTIVDPPKFKRRKVSAVRDFPEECGPFGSADGTSVEVKSGEDLGGGDSGEADSPNDEKDPQNFEFNEDLFVADTVEQTSGCSLKKEDPAVLSDQVDVGSFANDEPAKVKLVGVEAMDISFETEDCSLKKEDPVVSSHQVDGYILVNDEASKVELVGMEAVDMELETEDCSLRKEDPMVSSHQLDVPILDNNEDTKLTLVGMETLDAELATESCSLKNENAAILSYQIDESTLANDGPAELALVGMETSDMEFTTEGSVKQDLSYISEAPAPVGEVAMSDNSKSSLSNINIGGSGACMKEALTKRYPPRKKVAALRDFPRLCGRNAPRLSQDECLKELASLKEVAATDLQEAENNKRKFANFVEADFEGNAVKKLDVAEPSTEMRLALDNHHQVKVENMNIVKVEGTSELDIDYPELESSLKVSPGRKVVLGLMAKSECPWGSDICSPKFKPTSIGGTDDRKGKKVDFYAHLDRSKTATKSKGVLNHSGHQPLKKKRENSSSDDMGQLVTREKNSLDPNENNKHFKSVPKPRGYVNVFPLGRSNLSGHESDSVARNKVRKTLRLFQAVCRKLLQEAEAKPKSNVKESKRVDLQASKILKEKGSYVNEGEKIMGSVPGVEVGDEFQYRIELNIIGLHRQIQGGIDYMKQKNKVLATSIVASGGYADDLDNADVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGSESADGKSKIYVYDGLYEVESYWQDMGPHGKLVYKFRLRRKPGQPELAWKVLKKSKKFKKREGVRVEDISYGKEKIPICAVNTIDEENPPPFKYITKMMYPDCCNIVPPKGCNCTNGCSDHEKCSCVLKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPPTCYNRVSQLGINIQLEIFKTKSMGWGVRSLNSIPSGSFICEYIGEVLEDKEAEQRTGNDEYLFDIGNNKNNSNLWDGLSNLLPDSHSSSSEVVNDVGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHHDNRVPHVMLFAAENIPPLQELTYDYNYTIDQVRDSDGNIKKKYCFCGSVECTGRLY