AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene21523

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21523.t1 MTR_5g013420 97.153 1089 31 0 1 1089 1 1089 0.0 2178
MS.gene21523.t1 MTR_5g013420 97.062 1089 32 0 1 1089 1 1089 0.0 2175
MS.gene21523.t1 MTR_4g010830 69.039 1082 218 13 23 1089 1 980 0.0 1394
MS.gene21523.t1 MTR_4g010550 77.218 496 76 6 599 1089 1 464 0.0 756
MS.gene21523.t1 MTR_8g042750 40.172 580 312 13 532 1086 116 685 3.79e-125 399
MS.gene21523.t1 MTR_7g445710 42.804 535 217 10 576 1089 77 543 9.37e-125 393
MS.gene21523.t1 MTR_3g011440 40.926 540 298 13 567 1088 127 663 3.92e-122 390
MS.gene21523.t1 MTR_7g084090 42.553 517 262 13 603 1089 246 757 1.39e-117 380
MS.gene21523.t1 MTR_7g450730 41.935 527 210 10 570 1089 68 505 3.80e-116 369
MS.gene21523.t1 MTR_7g088370 39.771 523 281 16 580 1088 202 704 1.23e-115 374
MS.gene21523.t1 MTR_6g061270 41.618 519 267 12 603 1089 180 694 2.03e-113 367
MS.gene21523.t1 MTR_8g070070 41.612 459 249 7 617 1058 299 755 2.09e-113 370
MS.gene21523.t1 MTR_1g048950 41.187 539 259 11 576 1089 28 533 1.12e-111 358
MS.gene21523.t1 MTR_8g070075 40.781 461 254 7 615 1058 290 748 6.64e-111 363
MS.gene21523.t1 MTR_1g035420 39.321 501 281 11 581 1065 158 651 5.81e-110 357
MS.gene21523.t1 MTR_7g445530 41.584 505 206 10 576 1059 77 513 1.48e-109 351
MS.gene21523.t1 MTR_6g061200 40.964 498 251 10 611 1089 192 665 1.83e-108 353
MS.gene21523.t1 MTR_8g071030 40.611 458 253 7 618 1058 280 735 1.67e-105 348
MS.gene21523.t1 MTR_6g044690 38.889 468 248 12 615 1058 109 562 5.75e-93 308
MS.gene21523.t1 MTR_1g035400 37.984 516 276 18 581 1065 68 570 2.55e-89 299
MS.gene21523.t1 MTR_0376s0030 36.546 498 268 15 585 1058 87 560 9.21e-86 289
MS.gene21523.t1 MTR_7g084090 41.085 387 204 11 603 968 246 629 3.29e-77 268
MS.gene21523.t1 MTR_6g043960 34.510 510 268 14 584 1058 2 480 2.83e-76 260
MS.gene21523.t1 MTR_2g054460 33.135 504 261 13 581 1058 9 462 1.30e-68 238
MS.gene21523.t1 MTR_7g052480 42.814 334 162 10 774 1089 234 556 2.03e-67 237
MS.gene21523.t1 MTR_5g018850 34.848 330 151 10 801 1089 1201 1507 1.16e-43 174
MS.gene21523.t1 MTR_7g445600 52.055 146 33 1 914 1059 248 356 3.05e-42 159
MS.gene21523.t1 MTR_7g445600 40.606 165 81 3 576 740 73 220 3.81e-29 120
MS.gene21523.t1 MTR_8g078490 40.271 221 103 7 875 1089 1056 1253 3.33e-41 166
MS.gene21523.t1 MTR_4g132610 38.182 220 107 5 876 1089 851 1047 4.12e-37 152
MS.gene21523.t1 MTR_8g078505 33.987 306 146 11 811 1084 252 533 1.33e-35 143
MS.gene21523.t1 MTR_1g069570 30.606 330 159 11 809 1084 428 741 1.85e-31 133
MS.gene21523.t1 MTR_7g445810 38.191 199 94 6 576 766 90 267 6.32e-30 120
MS.gene21523.t1 MTR_1g080340 27.920 351 164 10 801 1087 259 584 5.36e-29 124
MS.gene21523.t1 MTR_7g098390 27.108 332 162 9 811 1084 388 697 2.99e-27 119
MS.gene21523.t1 MTR_1g069570 29.389 262 119 9 809 1017 428 676 2.64e-22 103
MS.gene21523.t1 MTR_0071s0100 30.451 266 114 12 832 1088 145 348 3.99e-20 94.4
MS.gene21523.t1 MTR_1g098370 34.359 195 90 9 894 1085 75 234 1.11e-18 91.3
MS.gene21523.t1 MTR_1g098000 33.846 195 91 9 894 1085 72 231 1.99e-18 90.5
MS.gene21523.t1 MTR_6g059310 30.808 198 103 6 891 1088 87 250 3.23e-18 87.8
MS.gene21523.t1 MTR_3g088625 34.694 196 84 7 899 1088 1201 1358 3.32e-18 91.3
MS.gene21523.t1 MTR_3g088625 34.694 196 84 7 899 1088 1307 1464 3.44e-18 91.3
MS.gene21523.t1 MTR_6g059310 30.808 198 103 6 891 1088 87 250 4.46e-18 87.4
MS.gene21523.t1 MTR_6g027690 29.876 241 125 10 854 1088 217 419 9.89e-16 81.3
MS.gene21523.t1 MTR_5g098680 33.333 153 91 3 643 787 267 416 2.17e-14 78.2
MS.gene21523.t1 MTR_8g027725 33.333 156 66 5 915 1064 791 914 1.57e-12 72.4
MS.gene21523.t1 MTR_8g027725 33.333 156 66 5 915 1064 806 929 1.70e-12 72.4
MS.gene21523.t1 MTR_1g064770 43.077 65 36 1 889 952 28 92 5.79e-12 63.2
MS.gene21523.t1 MTR_7g117355 31.410 156 69 4 915 1064 821 944 2.33e-11 68.6
MS.gene21523.t1 MTR_7g055660 31.928 166 74 5 905 1064 570 702 5.19e-11 67.4
MS.gene21523.t1 MTR_6g044000 37.500 104 50 2 584 672 2 105 6.60e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21523.t1 AT2G22740 64.122 524 170 8 581 1089 270 790 0.0 668
MS.gene21523.t1 AT2G22740 64.122 524 170 8 581 1089 270 790 0.0 668
MS.gene21523.t1 AT2G35160 61.122 517 166 6 580 1089 306 794 0.0 652
MS.gene21523.t1 AT2G35160 61.122 517 166 6 580 1089 306 794 0.0 652
MS.gene21523.t1 AT2G35160 61.122 517 166 6 580 1089 306 794 0.0 652
MS.gene21523.t1 AT2G35160 61.122 517 166 6 580 1089 306 794 0.0 652
MS.gene21523.t1 AT2G35160 61.122 517 166 6 580 1089 270 758 0.0 652
MS.gene21523.t1 AT5G04940 41.154 520 289 12 581 1088 155 669 6.03e-120 384
MS.gene21523.t1 AT5G04940 41.154 520 289 12 581 1088 155 669 6.03e-120 384
MS.gene21523.t1 AT5G13960 40.182 550 283 14 570 1089 91 624 1.07e-115 372
MS.gene21523.t1 AT5G13960 42.562 484 245 11 635 1089 11 490 8.82e-115 364
MS.gene21523.t1 AT1G73100 39.439 535 295 13 569 1088 148 668 7.20e-114 368
MS.gene21523.t1 AT4G13460 38.710 527 297 11 555 1063 123 641 3.85e-109 355
MS.gene21523.t1 AT4G13460 38.710 527 297 11 555 1063 123 641 3.85e-109 355
MS.gene21523.t1 AT2G33290 37.673 507 299 7 566 1058 134 637 1.08e-105 345
MS.gene21523.t1 AT2G33290 37.673 507 299 7 566 1058 134 637 1.08e-105 345
MS.gene21523.t1 AT2G33290 37.673 507 299 7 566 1058 134 637 1.08e-105 345
MS.gene21523.t1 AT2G33290 37.673 507 299 7 566 1058 134 637 1.08e-105 345
MS.gene21523.t1 AT1G17770 35.240 542 313 14 569 1088 167 692 4.37e-90 304
MS.gene21523.t1 AT2G24740 37.687 536 287 18 569 1088 250 754 7.98e-88 300
MS.gene21523.t1 AT5G47150 47.685 216 110 3 577 790 114 328 4.32e-52 186
MS.gene21523.t1 AT5G47160 33.118 465 241 16 328 782 3 407 3.83e-51 186
MS.gene21523.t1 AT5G47160 33.118 465 241 16 328 782 3 407 3.83e-51 186
MS.gene21523.t1 AT5G47160 33.118 465 241 16 328 782 3 407 3.83e-51 186
MS.gene21523.t1 AT2G23740 31.915 329 170 11 794 1088 1066 1374 2.60e-35 147
MS.gene21523.t1 AT2G23740 31.915 329 170 11 794 1088 1073 1381 2.68e-35 147
MS.gene21523.t1 AT2G23740 31.915 329 170 11 794 1088 1073 1381 2.68e-35 147
MS.gene21523.t1 AT2G23740 31.915 329 170 11 794 1088 1073 1381 2.68e-35 147
MS.gene21523.t1 AT3G04380 28.035 346 167 11 802 1087 137 460 5.35e-28 119
MS.gene21523.t1 AT3G04380 28.035 346 167 11 802 1087 121 444 5.69e-28 119
MS.gene21523.t1 AT3G04380 28.035 346 167 11 802 1087 110 433 6.20e-28 119
MS.gene21523.t1 AT3G04380 28.035 346 167 11 802 1087 137 460 6.26e-28 119
MS.gene21523.t1 AT3G04380 28.035 346 167 11 802 1087 110 433 7.37e-28 119
MS.gene21523.t1 AT3G04380 28.035 346 167 11 802 1087 94 417 9.40e-28 118
MS.gene21523.t1 AT2G05900 34.483 203 123 6 656 849 1 202 1.41e-27 115
MS.gene21523.t1 AT2G05900 39.286 84 43 2 1005 1088 236 311 4.66e-11 65.9
MS.gene21523.t1 AT2G23740 32.171 258 125 9 794 1017 1073 1314 7.83e-26 116
MS.gene21523.t1 AT2G23740 32.171 258 125 9 794 1017 1073 1314 7.83e-26 116
MS.gene21523.t1 AT1G04050 33.166 199 111 5 892 1087 542 721 1.19e-25 114
MS.gene21523.t1 AT1G04050 33.166 199 111 5 892 1087 542 721 1.19e-25 114
MS.gene21523.t1 AT1G04050 33.166 199 111 5 892 1087 438 617 1.34e-25 114
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 373 684 1.93e-25 114
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 373 684 1.93e-25 114
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 373 684 1.93e-25 114
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 373 684 1.93e-25 114
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 396 707 2.14e-25 113
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 396 707 2.14e-25 113
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 393 704 2.46e-25 113
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 393 704 2.46e-25 113
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 393 704 2.46e-25 113
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 393 704 2.46e-25 113
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 416 727 2.79e-25 113
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 416 727 2.79e-25 113
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 304 615 4.66e-25 112
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 324 635 4.91e-25 112
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 324 635 4.91e-25 112
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 324 635 4.91e-25 112
MS.gene21523.t1 AT5G43990 27.410 332 168 11 809 1087 324 635 4.91e-25 112
MS.gene21523.t1 AT3G03750 30.800 250 126 8 848 1088 138 349 4.64e-22 99.8
MS.gene21523.t1 AT4G30860 31.047 277 126 11 818 1088 247 464 2.43e-19 93.2
MS.gene21523.t1 AT1G76710 33.333 198 94 7 894 1088 66 228 3.08e-19 92.8
MS.gene21523.t1 AT1G76710 33.333 198 94 7 894 1088 66 228 3.08e-19 92.8
MS.gene21523.t1 AT1G76710 33.333 198 94 7 894 1088 66 228 3.99e-19 92.8
MS.gene21523.t1 AT1G76710 33.333 198 94 7 894 1088 66 228 4.76e-19 92.4
MS.gene21523.t1 AT1G77300 33.158 190 95 7 899 1088 1009 1166 2.00e-17 89.0
MS.gene21523.t1 AT1G77300 33.158 190 95 7 899 1088 1009 1166 3.19e-17 88.2
MS.gene21523.t1 AT3G59960 31.395 172 84 6 917 1088 112 249 4.53e-15 77.4
MS.gene21523.t1 AT3G59960 31.395 172 84 6 917 1088 112 249 4.53e-15 77.4
MS.gene21523.t1 AT3G59960 31.395 172 84 6 917 1088 112 249 4.53e-15 77.4
MS.gene21523.t1 AT1G57820 33.117 154 91 4 643 787 277 427 1.71e-14 78.6
MS.gene21523.t1 AT1G57820 33.117 154 91 4 643 787 277 427 1.71e-14 78.6
MS.gene21523.t1 AT3G03750 27.600 250 118 10 848 1088 138 333 9.77e-14 74.3
MS.gene21523.t1 AT1G57820 32.450 151 93 4 643 787 277 424 9.78e-14 76.3
MS.gene21523.t1 AT3G59960 31.395 172 84 6 917 1088 112 249 1.19e-13 73.9
MS.gene21523.t1 AT2G44150 29.651 172 87 6 917 1088 117 254 1.36e-13 74.3
MS.gene21523.t1 AT3G61740 35.032 157 63 6 915 1064 838 962 3.57e-13 74.7
MS.gene21523.t1 AT3G61740 35.032 157 63 6 915 1064 874 998 4.76e-13 74.3
MS.gene21523.t1 AT4G27910 31.098 164 70 6 927 1084 896 1022 3.46e-11 68.2

Find 266 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGATGTTGGTTTAAATT+TGG 0.118788 5.1:+6370438 None:intergenic
TCAATTGGATGTGCGTATTT+TGG 0.133214 5.1:-6371235 MS.gene21523:CDS
TCAAGTGGATGGGGATATTT+TGG 0.160554 5.1:-6371367 MS.gene21523:CDS
GAACATTCTGAAGAAGAATT+AGG 0.193360 5.1:-6371825 MS.gene21523:CDS
ATGGATGTTGGTTTAAATTT+GGG 0.221824 5.1:+6370439 None:intergenic
ATCTTAGTTATGTATTTAAA+TGG 0.224199 5.1:+6369359 None:intergenic
TTTACATAACCACGTGGTTT+TGG 0.228610 5.1:+6370196 None:intergenic
CGTTCAAGCTTCTGATCTTC+TGG 0.239657 5.1:+6369716 None:intergenic
TTCAAACTACTTTCGAGTTC+TGG 0.240711 5.1:+6370538 None:intergenic
GTTAAGAGTGGTGAAGATTT+AGG 0.245357 5.1:-6371669 MS.gene21523:CDS
TGGCCTTCATCGCCAGATTC+AGG 0.250113 5.1:-6369882 MS.gene21523:CDS
AGAATAGAGCTTAATATAAT+TGG 0.267824 5.1:-6369902 MS.gene21523:CDS
GGTGATCATAAAGGACATTC+TGG 0.295328 5.1:+6368784 None:intergenic
ATAGCTCCATTATGATTAAA+TGG 0.296004 5.1:+6369227 None:intergenic
TCCTTGAATTCCATCCCTTC+TGG 0.302980 5.1:-6369065 MS.gene21523:CDS
TGCAACTAGTATTGTTGCTT+CGG 0.303684 5.1:-6369822 MS.gene21523:CDS
CTTGAACTTAAGTGCGAATC+TGG 0.307961 5.1:+6368903 None:intergenic
GTTGGAGGGCACTTGCATTT+AGG 0.316799 5.1:+6369170 None:intergenic
GATTTAGGTGGTGGTGATTC+GGG 0.318391 5.1:-6371654 MS.gene21523:CDS
GCAACTAGTATTGTTGCTTC+GGG 0.319658 5.1:-6369821 MS.gene21523:CDS
TGAGTCATATTGGCAGGATA+TGG 0.322593 5.1:-6369576 MS.gene21523:CDS
GGAACCACCTATATTGATAT+TGG 0.323145 5.1:+6370921 None:intergenic
AAAGGCTGTAATTGTACTAA+TGG 0.324470 5.1:-6369302 MS.gene21523:CDS
TGAAGACTGTAGCTTGAAAA+AGG 0.324757 5.1:-6371412 MS.gene21523:CDS
GGGCATGGAAGCTGTGGATA+TGG 0.325224 5.1:-6371313 MS.gene21523:CDS
GGGAAGCCAGTGATGGTAAA+TGG 0.328236 5.1:-6371804 MS.gene21523:CDS
TTAGTACAATTACAGCCTTT+TGG 0.332092 5.1:+6369305 None:intergenic
GGAGACTTTGGATGCGGAAT+TGG 0.341628 5.1:-6371175 MS.gene21523:CDS
TGAAGGAGGCTTTAACTAAA+AGG 0.341984 5.1:-6370888 MS.gene21523:CDS
AAAGGTGTACTAAATCATTC+TGG 0.352831 5.1:-6370337 MS.gene21523:CDS
TTTGATTGAAAAGATGAATT+CGG 0.361033 5.1:-6371871 None:intergenic
AATCTATACCACCCTGAATC+TGG 0.365878 5.1:+6369870 None:intergenic
GAGATTCCATTTAATCATAA+TGG 0.367693 5.1:-6369233 MS.gene21523:CDS
AACATTCTGAAGAAGAATTA+GGG 0.368058 5.1:-6371824 MS.gene21523:CDS
TTGGCTGACTCTATTATAAC+AGG 0.368080 5.1:+6369148 None:intergenic
AGATTTAGGTGGTGGTGATT+CGG 0.370179 5.1:-6371655 MS.gene21523:CDS
AAGATCATGGGATCAGTTCC+TGG 0.371251 5.1:-6369953 MS.gene21523:CDS
CGGTATGGAAACTTCAGATA+TGG 0.371541 5.1:-6371049 MS.gene21523:CDS
GACATTCTGGGCATAGAGAT+TGG 0.378566 5.1:+6368797 None:intergenic
TATGGTGTTCACAGCACATA+TGG 0.381418 5.1:+6369400 None:intergenic
CATGGTCTCATCTCATCAAT+TGG 0.383281 5.1:-6371250 MS.gene21523:CDS
AGAATGATTTAGTACACCTT+TGG 0.384346 5.1:+6370339 None:intergenic
CCGGAAGAATGTGGACCGTT+TGG 0.384555 5.1:-6371717 MS.gene21523:CDS
ACATTCTGGGCATAGAGATT+GGG 0.385745 5.1:+6368798 None:intergenic
TTTATGATCACCATGACAAC+AGG 0.387530 5.1:-6368773 MS.gene21523:CDS
TGATGTTCCCTCGACCTTAA+CGG 0.395045 5.1:+6370579 None:intergenic
GATTCTTTCACATTTGACTT+TGG 0.398140 5.1:+6370043 None:intergenic
TCGTTGTCCAATATCAATAT+AGG 0.398722 5.1:-6370928 MS.gene21523:CDS
ACTTTCCGACGCTTAAACTT+AGG 0.400866 5.1:+6371759 None:intergenic
TTCTACAAACAGCTTGGAAC+AGG 0.402055 5.1:+6370092 None:intergenic
TCAAACTACTTTCGAGTTCT+GGG 0.404581 5.1:+6370539 None:intergenic
AAATGACGGACCTGCAGAAC+TGG 0.405443 5.1:-6371079 MS.gene21523:CDS
TGAAGCTTCAAAAGTGGAAT+TGG 0.409850 5.1:-6371337 MS.gene21523:CDS
GTTTCGCTTGCGAAGAAAGC+CGG 0.413635 5.1:-6369528 MS.gene21523:CDS
TCAAATTGATGAGTCTACTT+TGG 0.415306 5.1:-6371103 MS.gene21523:CDS
GAAAGTAGTGCTAGGTTTGA+TGG 0.415526 5.1:-6370500 MS.gene21523:CDS
AAAATCAGCTTCAACAAAGT+TGG 0.420516 5.1:+6370702 None:intergenic
GCGAGGTCAAGAATTCTGTT+AGG 0.421124 5.1:-6369667 MS.gene21523:CDS
TGTGGTTCTGTGGAATGTAC+TGG 0.421622 5.1:-6368624 MS.gene21523:CDS
CACCCTGAATCTGGCGATGA+AGG 0.425090 5.1:+6369879 None:intergenic
ACTATCGATGCCGCTCAGTT+TGG 0.425253 5.1:-6368855 MS.gene21523:CDS
TCCTCATGTCATGTTATTTG+CGG 0.425495 5.1:-6368748 MS.gene21523:CDS
TGTTGTCATGGTGATCATAA+AGG 0.429329 5.1:+6368775 None:intergenic
GCCAATCTCATCTCAGTAGA+TGG 0.429763 5.1:+6370643 None:intergenic
TCTATGAAGTTGAGTCATAT+TGG 0.437887 5.1:-6369586 MS.gene21523:CDS
GACATAGCTACCTCGCCAAC+TGG 0.438153 5.1:+6370967 None:intergenic
ATTGGTGGGCATGGAGACTT+TGG 0.440213 5.1:-6371187 MS.gene21523:CDS
TGCAATATTGTCCCTCCAAA+AGG 0.442817 5.1:-6369320 MS.gene21523:CDS
GAGTCATATTGGCAGGATAT+GGG 0.443386 5.1:-6369575 MS.gene21523:CDS
GGCGAAGTCAGAATGTCCTT+GGG 0.446249 5.1:-6370479 MS.gene21523:CDS
AGAAGATCAGAAGCTTGAAC+GGG 0.449548 5.1:-6369714 MS.gene21523:CDS
GGAAGCTGTGGATATGGAAT+TGG 0.449691 5.1:-6371307 MS.gene21523:CDS
TCATCACAAACCAACATTGA+TGG 0.455705 5.1:+6371846 None:intergenic
AGTTCCTTCCAAGCAAGCTC+TGG 0.459645 5.1:+6369500 None:intergenic
CGGGTCAACCAGAGCTTGCT+TGG 0.460037 5.1:-6369508 MS.gene21523:CDS
TAAAACCAAGTCAATGGGAT+GGG 0.462217 5.1:-6369096 MS.gene21523:CDS
GCCGCTCAGTTTGGTAATGT+GGG 0.462843 5.1:-6368846 MS.gene21523:CDS
TGGCGAAGTCAGAATGTCCT+TGG 0.463625 5.1:-6370480 MS.gene21523:CDS
TGAACCTGCAAAAGTGGAAT+TGG 0.464663 5.1:-6371469 MS.gene21523:CDS
TGCCGCTCAGTTTGGTAATG+TGG 0.469315 5.1:-6368847 MS.gene21523:CDS
TCCAGAAGGGATGGAATTCA+AGG 0.469469 5.1:+6369064 None:intergenic
GAGTCTCCATTTACCATCAC+TGG 0.471142 5.1:+6371798 None:intergenic
GGCCTTCATCGCCAGATTCA+GGG 0.471401 5.1:-6369881 MS.gene21523:CDS
GGGACAATATTGCAACAATC+AGG 0.476635 5.1:+6369329 None:intergenic
GAATTCTGTTAGGGTGATAC+GGG 0.478791 5.1:-6369657 MS.gene21523:CDS
TCAGTTCCTGGGGTTGAAGT+TGG 0.481794 5.1:-6369941 MS.gene21523:CDS
CAGAAGATCAGAAGCTTGAA+CGG 0.482485 5.1:-6369715 MS.gene21523:CDS
TATGGGGCCACATGGGAAGC+TGG 0.483438 5.1:-6369558 MS.gene21523:CDS
TATAATAGAGTCAGCCAACT+TGG 0.485663 5.1:-6369143 MS.gene21523:CDS
ACACTCATCCTGGCTGAGAC+GGG 0.486717 5.1:+6370801 None:intergenic
AGAATTCTGTTAGGGTGATA+CGG 0.488400 5.1:-6369658 MS.gene21523:CDS
ATCTTATATATCAGAGGCAC+GGG 0.488681 5.1:-6370992 MS.gene21523:CDS
AGAACTCGAAAGTAGTTTGA+AGG 0.490279 5.1:-6370536 MS.gene21523:CDS
ATTTAGTACACCTTTGGACT+TGG 0.490483 5.1:+6370345 None:intergenic
GTCTCATCTCATCAAGTGGA+TGG 0.491155 5.1:-6371378 MS.gene21523:CDS
GTTGAATATTTATGCCAAGT+TGG 0.491644 5.1:+6369129 None:intergenic
CCAAACGGTCCACATTCTTC+CGG 0.491712 5.1:+6371717 None:intergenic
GATATGGAATTTACAACAGA+AGG 0.491786 5.1:-6371033 MS.gene21523:CDS
GGCGCTGGATAATCATCATC+AGG 0.492955 5.1:-6370623 MS.gene21523:CDS
CCGACCAATGCCAGTTCTGC+AGG 0.494283 5.1:+6371069 None:intergenic
AACTAGTATTGTTGCTTCGG+GGG 0.496574 5.1:-6369819 MS.gene21523:CDS
GTTATGTATTTAAATGGAGG+GGG 0.500203 5.1:+6369365 None:intergenic
CTTGGTCGTAGTAATTTAAG+TGG 0.500245 5.1:-6370163 MS.gene21523:CDS
TAATGAAGGGGAGAAGATCA+TGG 0.501403 5.1:-6369966 MS.gene21523:CDS
GGAAAACATGAACACCGTTA+AGG 0.501741 5.1:-6370593 MS.gene21523:CDS
TGGCAGGATATGGGGCCACA+TGG 0.503771 5.1:-6369566 MS.gene21523:CDS
TACTGAGATGAGATTGGCGC+TGG 0.504551 5.1:-6370638 MS.gene21523:CDS
AGCCTCCTTCATACAAGCAC+TGG 0.507216 5.1:+6370900 None:intergenic
AAAACTGACATTGGTGGGCA+TGG 0.507583 5.1:-6371196 MS.gene21523:CDS
TTTCGCTTGCGAAGAAAGCC+GGG 0.508175 5.1:-6369527 MS.gene21523:CDS
CAACGATGAACCTGCAAAAG+TGG 0.509691 5.1:-6371475 MS.gene21523:CDS
AAAGGGAGCTATGTTAATGA+AGG 0.510173 5.1:-6369980 MS.gene21523:CDS
TGTACTGGTAGGTTGTATTG+AGG 0.511536 5.1:-6368609 None:intergenic
AAGGTGTACTAAATCATTCT+GGG 0.513245 5.1:-6370336 MS.gene21523:CDS
AAATTTAAACCAACATCCAT+TGG 0.513515 5.1:-6370436 MS.gene21523:CDS
TGATAGTCCCAACGACGAAA+AGG 0.515728 5.1:-6371625 MS.gene21523:CDS
ATTGGTGGGCGTAGAAGCTA+TGG 0.516134 5.1:-6371451 MS.gene21523:CDS
ACCATCTACTGAGATGAGAT+TGG 0.516179 5.1:-6370644 MS.gene21523:CDS
TCAACCAGAGCTTGCTTGGA+AGG 0.518082 5.1:-6369504 MS.gene21523:CDS
AGGGAATGCAGTCAAGAAGT+TGG 0.520693 5.1:-6370677 MS.gene21523:CDS
GTGATCATAAAGGACATTCT+GGG 0.521375 5.1:+6368785 None:intergenic
CTTATCTGATCAAGTGGATG+TGG 0.522415 5.1:-6371508 MS.gene21523:CDS
TACACCCCATCCCATTGACT+TGG 0.523806 5.1:+6369091 None:intergenic
TGAAGACTGTAGCTTGAGAA+AGG 0.523979 5.1:-6371280 MS.gene21523:CDS
CGAGGTCAAGAATTCTGTTA+GGG 0.527113 5.1:-6369666 MS.gene21523:CDS
CTGACTCTATTATAACAGGT+TGG 0.528312 5.1:+6369152 None:intergenic
TGAAGTTGAGTCATATTGGC+AGG 0.528849 5.1:-6369582 MS.gene21523:CDS
CAATGCTCCCCGTCTCAGCC+AGG 0.529270 5.1:-6370809 MS.gene21523:CDS
AAGGAAGCTGAACAAAGAAC+TGG 0.530093 5.1:-6369002 MS.gene21523:CDS
AGCTTCAAAAGTGGAATTGG+TGG 0.531376 5.1:-6371334 MS.gene21523:CDS
TTAAGTGCGAATCTGGCAAA+AGG 0.531752 5.1:+6368910 None:intergenic
ATCGTAAGTCAGCTCTTGCA+AGG 0.532130 5.1:+6368710 None:intergenic
GGACCGTTTGGTTCTGCTGA+TGG 0.532995 5.1:-6371705 MS.gene21523:CDS
TAGTTATGTATTTAAATGGA+GGG 0.533607 5.1:+6369363 None:intergenic
AAGGGAGCTATGTTAATGAA+GGG 0.535402 5.1:-6369979 MS.gene21523:CDS
CCTAGCACTACTTTCCTGCC+TGG 0.535459 5.1:+6370508 None:intergenic
GCTCCTTTAGACACTCATCC+TGG 0.536997 5.1:+6370791 None:intergenic
AAAAGTGGAATTGGTGGGCA+TGG 0.537948 5.1:-6371328 MS.gene21523:CDS
CATTCTGGGCATAGAGATTG+GGG 0.538907 5.1:+6368799 None:intergenic
CAACTAGTATTGTTGCTTCG+GGG 0.538994 5.1:-6369820 MS.gene21523:CDS
TGGTTCCAGTGCTTGTATGA+AGG 0.543235 5.1:-6370905 MS.gene21523:CDS
AGATCATGGGATCAGTTCCT+GGG 0.544056 5.1:-6369952 MS.gene21523:CDS
TAACGATGAAGCTTCAAAAG+TGG 0.544439 5.1:-6371343 MS.gene21523:CDS
GATACAAAACTGACATTGGT+GGG 0.544785 5.1:-6371201 MS.gene21523:CDS
CTCTATTATAACAGGTTGGA+GGG 0.544859 5.1:+6369156 None:intergenic
AAAGCTTTCTACAAACAGCT+TGG 0.545465 5.1:+6370086 None:intergenic
TGGATGTTGGTTTAAATTTG+GGG 0.545850 5.1:+6370440 None:intergenic
CTCATCTCATCAAGTGGATG+GGG 0.546998 5.1:-6371376 MS.gene21523:CDS
AGTTATGTATTTAAATGGAG+GGG 0.547903 5.1:+6369364 None:intergenic
GATAAAACTTCCAGAAGGGA+TGG 0.548978 5.1:+6369055 None:intergenic
TTAGTTATGTATTTAAATGG+AGG 0.549426 5.1:+6369362 None:intergenic
TTAAAACCAAGTCAATGGGA+TGG 0.552622 5.1:-6369097 MS.gene21523:CDS
CGAAGATACAAAACTGACAT+TGG 0.553321 5.1:-6371205 MS.gene21523:CDS
TCTCATCTCATCAAGTGGAT+GGG 0.553872 5.1:-6371377 MS.gene21523:CDS
ACTCTATTATAACAGGTTGG+AGG 0.554328 5.1:+6369155 None:intergenic
GTTTGAAGGTCTCACCAGGC+AGG 0.555243 5.1:-6370522 MS.gene21523:CDS
TATCTTATATATCAGAGGCA+CGG 0.555399 5.1:-6370993 MS.gene21523:CDS
TTTAAACCAACATCCATTGG+TGG 0.555528 5.1:-6370433 MS.gene21523:CDS
AACAACAGTAATCTTTGGGA+TGG 0.558592 5.1:-6368942 MS.gene21523:CDS
GAATTCGGAGCCATCAATGT+TGG 0.558730 5.1:-6371856 MS.gene21523:CDS
CATGAACACCGTTAAGGTCG+AGG 0.559561 5.1:-6370587 MS.gene21523:CDS
AAGTGACTGTAGTTTGAAGA+AGG 0.559982 5.1:-6371544 MS.gene21523:CDS
TCTGTACCACCAATGGATGT+TGG 0.560078 5.1:+6370427 None:intergenic
CAGCCAGGATGAGTGTCTAA+AGG 0.561581 5.1:-6370794 MS.gene21523:CDS
AGAACTGGCATTGGTCGGTA+TGG 0.564148 5.1:-6371064 MS.gene21523:CDS
TTCCAGTGCTTGTATGAAGG+AGG 0.566944 5.1:-6370902 MS.gene21523:CDS
AAATTCTAGTTCTGATGACA+TGG 0.567262 5.1:-6370287 MS.gene21523:CDS
ATGAGAGTGACTCAGTGGCC+CGG 0.569197 5.1:-6370138 MS.gene21523:CDS
CAAGCAAGCTCTGGTTGACC+CGG 0.569213 5.1:+6369509 None:intergenic
CCTGTCATCTGTACCACCAA+TGG 0.569944 5.1:+6370420 None:intergenic
GACACTCATCCTGGCTGAGA+CGG 0.572210 5.1:+6370800 None:intergenic
CCATTGGTGGTACAGATGAC+AGG 0.575959 5.1:-6370420 MS.gene21523:CDS
AAAACCAAGTCAATGGGATG+GGG 0.578324 5.1:-6369095 MS.gene21523:CDS
AAGCCTCTAGTCTATGAGTG+TGG 0.578730 5.1:-6369194 MS.gene21523:CDS
TGGAGAGGTTCTTGAGGACA+AGG 0.580571 5.1:-6369021 MS.gene21523:CDS
AGGGAGCTATGTTAATGAAG+GGG 0.580705 5.1:-6369978 MS.gene21523:CDS
ATTGGTGGGCATGGAAGCTG+TGG 0.583994 5.1:-6371319 MS.gene21523:CDS
GGGCATGGAGACTTTGGATG+CGG 0.586754 5.1:-6371181 MS.gene21523:CDS
TGTGGTCTCATCTCATCAAG+TGG 0.587074 5.1:-6371382 MS.gene21523:CDS
ACTAGTATTGTTGCTTCGGG+GGG 0.588563 5.1:-6369818 MS.gene21523:CDS
CGGACCTGCAGAACTGGCAT+TGG 0.588611 5.1:-6371073 MS.gene21523:CDS
TGCTGATGGTACGAGTGTTG+AGG 0.588615 5.1:-6371691 MS.gene21523:CDS
CACAGATAAAACTTCCAGAA+GGG 0.588807 5.1:+6369051 None:intergenic
GGCAGGATATGGGGCCACAT+GGG 0.589278 5.1:-6369565 MS.gene21523:CDS
AGATACAAAACTGACATTGG+TGG 0.589399 5.1:-6371202 MS.gene21523:CDS
ATGGTGTTCACAGCACATAT+GGG 0.589870 5.1:+6369401 None:intergenic
AGCCTCTAGTCTATGAGTGT+GGG 0.592603 5.1:-6369193 MS.gene21523:CDS
TCACAGATAAAACTTCCAGA+AGG 0.593451 5.1:+6369050 None:intergenic
GGCACGGGCTCCAGTTGGCG+AGG 0.594211 5.1:-6370977 MS.gene21523:CDS
GAGTCTACTTTGGCAAATGA+CGG 0.594825 5.1:-6371093 MS.gene21523:CDS
TAAGTCAGCTCTTGCAAGGG+AGG 0.595124 5.1:+6368714 None:intergenic
CAATTGATGAGATGAGACCA+TGG 0.596287 5.1:+6371251 None:intergenic
CATGAGGAACCCTGTTGTCA+TGG 0.598124 5.1:+6368763 None:intergenic
AAGCAACAATACTAGTTGCA+AGG 0.598665 5.1:+6369825 None:intergenic
AGTAGTTTGAAGGTCTCACC+AGG 0.598759 5.1:-6370526 MS.gene21523:CDS
TCAGAGGCACGGGCTCCAGT+TGG 0.598975 5.1:-6370982 MS.gene21523:CDS
GGATGTTGGTTTAAATTTGG+GGG 0.601362 5.1:+6370441 None:intergenic
AGTCATATTGGCAGGATATG+GGG 0.602342 5.1:-6369574 MS.gene21523:CDS
CCAGGCAGGAAAGTAGTGCT+AGG 0.602466 5.1:-6370508 MS.gene21523:CDS
AATGAAGGGGAGAAGATCAT+GGG 0.604075 5.1:-6369965 MS.gene21523:CDS
TCATCACCAACTTCAACCCC+AGG 0.604148 5.1:+6369935 None:intergenic
TTATGTATTTAAATGGAGGG+GGG 0.605614 5.1:+6369366 None:intergenic
AGTGGTGAAGATTTAGGTGG+TGG 0.605730 5.1:-6371663 MS.gene21523:CDS
TTCCGACGCTTAAACTTAGG+CGG 0.605896 5.1:+6371762 None:intergenic
AGATTTATCTTATATATCAG+AGG 0.608018 5.1:-6370998 MS.gene21523:CDS
CGGGGCTCTGAATCAGCGGA+TGG 0.609088 5.1:-6369638 MS.gene21523:CDS
TGTGGTCTTATCTGATCAAG+TGG 0.612824 5.1:-6371514 MS.gene21523:CDS
TATCTGTGAATATATTGGAG+AGG 0.613185 5.1:-6369036 MS.gene21523:CDS
GCTTCAAAAGTGGAATTGGT+GGG 0.613307 5.1:-6371333 MS.gene21523:CDS
ACCTGCAAAAGTGGAATTGG+TGG 0.613722 5.1:-6371466 MS.gene21523:CDS
TGGTGGTACAGATGACAGGA+AGG 0.614455 5.1:-6370416 MS.gene21523:CDS
AGAATTAGGGAAGCCAGTGA+TGG 0.615410 5.1:-6371811 MS.gene21523:CDS
AATTGATGAGATGAGACCAT+GGG 0.617974 5.1:+6371252 None:intergenic
AGTGAAGTAGTGAATGATGT+TGG 0.618250 5.1:-6368882 MS.gene21523:CDS
AGCAAGATATATGTTTACGA+TGG 0.618907 5.1:-6369611 MS.gene21523:CDS
CTTGAGAAAGGAAGATCCCA+TGG 0.621289 5.1:-6371268 MS.gene21523:CDS
ATCCGCCTAAGTTTAAGCGT+CGG 0.622802 5.1:-6371764 MS.gene21523:CDS
ATGAACACCGTTAAGGTCGA+GGG 0.623227 5.1:-6370586 MS.gene21523:CDS
GTACCATCAGCAGAACCAAA+CGG 0.623497 5.1:+6371702 None:intergenic
TAATCATCATCAGGTTAAAG+CGG 0.623645 5.1:-6370614 MS.gene21523:CDS
CACTCATCCTGGCTGAGACG+GGG 0.624068 5.1:+6370802 None:intergenic
TTATCTGATCAAGTGGATGT+GGG 0.624073 5.1:-6371507 MS.gene21523:CDS
GGCCCACACTCATAGACTAG+AGG 0.626323 5.1:+6369191 None:intergenic
CAAATGTGAAAGAATCAAAG+AGG 0.632909 5.1:-6370036 MS.gene21523:CDS
TTGTCCAATATCAATATAGG+TGG 0.635936 5.1:-6370925 MS.gene21523:CDS
TGCTTTGAAGAATAGTAGCG+AGG 0.636465 5.1:-6369684 MS.gene21523:CDS
GATACGGGGCTCTGAATCAG+CGG 0.636898 5.1:-6369642 MS.gene21523:CDS
CCTGCAGAACTGGCATTGGT+CGG 0.637297 5.1:-6371069 MS.gene21523:CDS
ACTTGATCAGATAAGACCAC+AGG 0.642209 5.1:+6371516 None:intergenic
ACTTGATGAGATGAGACCAC+AGG 0.643420 5.1:+6371384 None:intergenic
AAAACTGCGACCAAGTCCAA+AGG 0.643866 5.1:-6370355 MS.gene21523:CDS
CATGGGTCAATTAGTAACAC+GGG 0.644532 5.1:-6370269 MS.gene21523:CDS
TTTGAAGAAGGAGGATCCTG+TGG 0.645117 5.1:-6371532 MS.gene21523:CDS
TCGTAAGTCAGCTCTTGCAA+GGG 0.649908 5.1:+6368711 None:intergenic
CCGCTCAGTTTGGTAATGTG+GGG 0.650291 5.1:-6368845 MS.gene21523:CDS
AAATGTGAAAGAATCAAAGA+GGG 0.651541 5.1:-6370035 MS.gene21523:CDS
ACGAGTGTTGAGGTTAAGAG+TGG 0.652765 5.1:-6371681 MS.gene21523:CDS
GATCAAGTTCGTGATTCCGA+TGG 0.655471 5.1:-6368672 MS.gene21523:CDS
ATATATTGGAGAGGTTCTTG+AGG 0.657084 5.1:-6369027 MS.gene21523:CDS
ACATGGGTCAATTAGTAACA+CGG 0.669242 5.1:-6370270 MS.gene21523:CDS
AAGAGTGGTGAAGATTTAGG+TGG 0.670342 5.1:-6371666 MS.gene21523:CDS
CTTAAATTACTACGACCAAG+AGG 0.670569 5.1:+6370166 None:intergenic
GCCGCAAATAACATGACATG+AGG 0.673823 5.1:+6368747 None:intergenic
CAGTGGCCCGGAATAAAGTG+AGG 0.675048 5.1:-6370126 MS.gene21523:CDS
GTTCTGTGGAATGTACTGGT+AGG 0.675695 5.1:-6368620 MS.gene21523:CDS
GATCATGGGATCAGTTCCTG+GGG 0.678571 5.1:-6369951 MS.gene21523:CDS
AATTCTAGTTCTGATGACAT+GGG 0.681067 5.1:-6370286 MS.gene21523:CDS
GGTGGTACAGATGACAGGAA+GGG 0.684498 5.1:-6370415 MS.gene21523:CDS
TTGATATATACAGGGCAGGG+TGG 0.688777 5.1:-6369764 MS.gene21523:CDS
TTATGATCACCATGACAACA+GGG 0.689712 5.1:-6368772 MS.gene21523:CDS
TGACTGTAGTTTGAAGAAGG+AGG 0.692610 5.1:-6371541 MS.gene21523:CDS
TGGTCATGAGAGTGACTCAG+TGG 0.696808 5.1:-6370143 MS.gene21523:CDS
GAAGATCAGAAGCTTGAACG+GGG 0.698030 5.1:-6369713 MS.gene21523:CDS
GCGAAGTCAGAATGTCCTTG+GGG 0.700207 5.1:-6370478 MS.gene21523:CDS
CCTGCAAAAGTGGAATTGGT+GGG 0.702732 5.1:-6371465 MS.gene21523:CDS
AAAAGTGTCCCAAAACCACG+TGG 0.710733 5.1:-6370205 MS.gene21523:CDS
GCATTGCGTCCACATAAACG+TGG 0.716479 5.1:+6370826 None:intergenic
TTATAAACCAGCTTCCCATG+TGG 0.718258 5.1:+6369551 None:intergenic
GAACAAATATCAGATCCCCA+AGG 0.723725 5.1:+6370463 None:intergenic
CCCCACATTACCAAACTGAG+CGG 0.724747 5.1:+6368845 None:intergenic
GTACACAAGAACATTTCTCG+TGG 0.725371 5.1:+6369270 None:intergenic
CTTCATCGCCAGATTCAGGG+TGG 0.729437 5.1:-6369878 MS.gene21523:CDS
AATTCTGTTAGGGTGATACG+GGG 0.749765 5.1:-6369656 MS.gene21523:CDS
AAAACATTTACATAACCACG+TGG 0.753070 5.1:+6370190 None:intergenic
TATATTGATATTGGACAACG+AGG 0.767583 5.1:+6370930 None:intergenic
ATTCTGGGCATAGAGATTGG+GGG 0.768685 5.1:+6368800 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTTAGTTATGTATTTAAA+TGG + chr5.1:6371113-6371132 None:intergenic 15.0%
!!! ATAAGATAAATCTTGTTTTA+CGG + chr5.1:6369464-6369483 None:intergenic 15.0%
!! AGAATAGAGCTTAATATAAT+TGG - chr5.1:6370567-6370586 MS.gene21523:CDS 20.0%
!! AGATTTATCTTATATATCAG+AGG - chr5.1:6369471-6369490 MS.gene21523:CDS 20.0%
!! TAGTTATGTATTTAAATGGA+GGG + chr5.1:6371109-6371128 None:intergenic 20.0%
!! TTAGTTATGTATTTAAATGG+AGG + chr5.1:6371110-6371129 None:intergenic 20.0%
!! TTATATGAAGCAAAAAAACA+AGG - chr5.1:6370620-6370639 MS.gene21523:CDS 20.0%
!!! AAGTGTTTGTTATTTTCATT+AGG + chr5.1:6370243-6370262 None:intergenic 20.0%
!!! AATTTTTAAAACCAAGTCAA+TGG - chr5.1:6371367-6371386 MS.gene21523:CDS 20.0%
!!! AGTTTTATCTGTGAATATAT+TGG - chr5.1:6371428-6371447 MS.gene21523:CDS 20.0%
!!! ATTTTTAAAACCAAGTCAAT+GGG - chr5.1:6371368-6371387 MS.gene21523:CDS 20.0%
!!! TTTTCTCTTTTCTTTTTCAA+CGG + chr5.1:6370165-6370184 None:intergenic 20.0%
! AAATGTGAAAGAATCAAAGA+GGG - chr5.1:6370434-6370453 MS.gene21523:CDS 25.0%
! AAATTTAAACCAACATCCAT+TGG - chr5.1:6370033-6370052 MS.gene21523:CDS 25.0%
! AAGTTCAACAAAAAAAGAGA+AGG - chr5.1:6371005-6371024 MS.gene21523:CDS 25.0%
! ACAAAAACAACAGTAATCTT+TGG - chr5.1:6371522-6371541 MS.gene21523:CDS 25.0%
! ACAAGCTTCAAAAATACTTA+AGG - chr5.1:6370464-6370483 MS.gene21523:CDS 25.0%
! AGTTATGTATTTAAATGGAG+GGG + chr5.1:6371108-6371127 None:intergenic 25.0%
! ATAGCTCCATTATGATTAAA+TGG + chr5.1:6371245-6371264 None:intergenic 25.0%
! CAAAAACAACAGTAATCTTT+GGG - chr5.1:6371523-6371542 MS.gene21523:CDS 25.0%
! CAAAAATACTTAAGGAGAAA+GGG - chr5.1:6370472-6370491 MS.gene21523:CDS 25.0%
! GAGATTCCATTTAATCATAA+TGG - chr5.1:6371236-6371255 MS.gene21523:CDS 25.0%
! TCAAAAATACTTAAGGAGAA+AGG - chr5.1:6370471-6370490 MS.gene21523:CDS 25.0%
!! AACATTCTGAAGAAGAATTA+GGG - chr5.1:6368645-6368664 MS.gene21523:CDS 25.0%
!! GATGAGTATCTTTTTGATAT+TGG - chr5.1:6371494-6371513 MS.gene21523:CDS 25.0%
!! TATGTAAATGTTTTTCCTCT+TGG - chr5.1:6370288-6370307 MS.gene21523:CDS 25.0%
!! TCATTGAACTCAAAATTTTG+AGG + chr5.1:6368872-6368891 None:intergenic 25.0%
!! TTTCTTTTTGATATTGCCAT+CGG + chr5.1:6371816-6371835 None:intergenic 25.0%
!!! AAAAAGAAATACTGCTTTTG+TGG - chr5.1:6371827-6371846 MS.gene21523:CDS 25.0%
!!! AATGGATGTTGGTTTAAATT+TGG + chr5.1:6370034-6370053 None:intergenic 25.0%
!!! ATGGATGTTGGTTTAAATTT+GGG + chr5.1:6370033-6370052 None:intergenic 25.0%
!!! CAGATGTTTTGATATATACA+GGG - chr5.1:6370697-6370716 MS.gene21523:CDS 25.0%
AAAACATTTACATAACCACG+TGG + chr5.1:6370282-6370301 None:intergenic 30.0%
AAAATCAGCTTCAACAAAGT+TGG + chr5.1:6369770-6369789 None:intergenic 30.0%
AAAGGCTGTAATTGTACTAA+TGG - chr5.1:6371167-6371186 MS.gene21523:CDS 30.0%
AAGGTGTACTAAATCATTCT+GGG - chr5.1:6370133-6370152 MS.gene21523:CDS 30.0%
AGAATGATTTAGTACACCTT+TGG + chr5.1:6370133-6370152 None:intergenic 30.0%
AGCAAGATATATGTTTACGA+TGG - chr5.1:6370858-6370877 MS.gene21523:CDS 30.0%
CAAATGTGAAAGAATCAAAG+AGG - chr5.1:6370433-6370452 MS.gene21523:CDS 30.0%
GATATGGAATTTACAACAGA+AGG - chr5.1:6369436-6369455 MS.gene21523:CDS 30.0%
GTTATGTATTTAAATGGAGG+GGG + chr5.1:6371107-6371126 None:intergenic 30.0%
GTTCTTGTGTACTCAAAAAT+GGG - chr5.1:6371210-6371229 MS.gene21523:CDS 30.0%
GTTGAATATTTATGCCAAGT+TGG + chr5.1:6371343-6371362 None:intergenic 30.0%
TAATCATCATCAGGTTAAAG+CGG - chr5.1:6369855-6369874 MS.gene21523:CDS 30.0%
TATATTGATATTGGACAACG+AGG + chr5.1:6369542-6369561 None:intergenic 30.0%
TATCTGTGAATATATTGGAG+AGG - chr5.1:6371433-6371452 MS.gene21523:CDS 30.0%
TATCTTATATATCAGAGGCA+CGG - chr5.1:6369476-6369495 MS.gene21523:CDS 30.0%
TCAAATTGATGAGTCTACTT+TGG - chr5.1:6369366-6369385 MS.gene21523:CDS 30.0%
TCGTTGTCCAATATCAATAT+AGG - chr5.1:6369541-6369560 MS.gene21523:CDS 30.0%
TCTATGAAGTTGAGTCATAT+TGG - chr5.1:6370883-6370902 MS.gene21523:CDS 30.0%
TGTTCTTGTGTACTCAAAAA+TGG - chr5.1:6371209-6371228 MS.gene21523:CDS 30.0%
TTATGTATTTAAATGGAGGG+GGG + chr5.1:6371106-6371125 None:intergenic 30.0%
TTCTTGTGTACTCAAAAATG+GGG - chr5.1:6371211-6371230 MS.gene21523:CDS 30.0%
TTGTCCAATATCAATATAGG+TGG - chr5.1:6369544-6369563 MS.gene21523:CDS 30.0%
! AAAGGTGTACTAAATCATTC+TGG - chr5.1:6370132-6370151 MS.gene21523:CDS 30.0%
! ATGTTTTCCTCACTTTATTC+CGG + chr5.1:6370353-6370372 None:intergenic 30.0%
! GAACATTCTGAAGAAGAATT+AGG - chr5.1:6368644-6368663 MS.gene21523:CDS 30.0%
! GATTCTTTCACATTTGACTT+TGG + chr5.1:6370429-6370448 None:intergenic 30.0%
! TTAGTACAATTACAGCCTTT+TGG + chr5.1:6371167-6371186 None:intergenic 30.0%
!! AAATTCTAGTTCTGATGACA+TGG - chr5.1:6370182-6370201 MS.gene21523:CDS 30.0%
!! AATTCTAGTTCTGATGACAT+GGG - chr5.1:6370183-6370202 MS.gene21523:CDS 30.0%
!! TGGATGTTGGTTTAAATTTG+GGG + chr5.1:6370032-6370051 None:intergenic 30.0%
!! TTGTTGAAGCTGATTTTGAA+GGG - chr5.1:6369773-6369792 MS.gene21523:CDS 30.0%
!! TTTGTTGAAGCTGATTTTGA+AGG - chr5.1:6369772-6369791 MS.gene21523:CDS 30.0%
!!! GCAGATGTTTTGATATATAC+AGG - chr5.1:6370696-6370715 MS.gene21523:CDS 30.0%
!!! TGTTATTTTCTGCTTCTTGT+AGG + chr5.1:6369735-6369754 None:intergenic 30.0%
AAAGCTTTCTACAAACAGCT+TGG + chr5.1:6370386-6370405 None:intergenic 35.0%
AAAGGGAGCTATGTTAATGA+AGG - chr5.1:6370489-6370508 MS.gene21523:CDS 35.0%
AAGCAACAATACTAGTTGCA+AGG + chr5.1:6370647-6370666 None:intergenic 35.0%
AAGGGAGCTATGTTAATGAA+GGG - chr5.1:6370490-6370509 MS.gene21523:CDS 35.0%
AAGTGACTGTAGTTTGAAGA+AGG - chr5.1:6368925-6368944 MS.gene21523:CDS 35.0%
AATTGATGAGATGAGACCAT+GGG + chr5.1:6369220-6369239 None:intergenic 35.0%
ACATGGGTCAATTAGTAACA+CGG - chr5.1:6370199-6370218 MS.gene21523:CDS 35.0%
AGAACTCGAAAGTAGTTTGA+AGG - chr5.1:6369933-6369952 MS.gene21523:CDS 35.0%
AGAATTCTGTTAGGGTGATA+CGG - chr5.1:6370811-6370830 MS.gene21523:CDS 35.0%
AGATACAAAACTGACATTGG+TGG - chr5.1:6369267-6369286 MS.gene21523:CDS 35.0%
AGTGAAGTAGTGAATGATGT+TGG - chr5.1:6371587-6371606 MS.gene21523:CDS 35.0%
ATATATTGGAGAGGTTCTTG+AGG - chr5.1:6371442-6371461 MS.gene21523:CDS 35.0%
ATTTAGTACACCTTTGGACT+TGG + chr5.1:6370127-6370146 None:intergenic 35.0%
CACAGATAAAACTTCCAGAA+GGG + chr5.1:6371421-6371440 None:intergenic 35.0%
CGAAGATACAAAACTGACAT+TGG - chr5.1:6369264-6369283 MS.gene21523:CDS 35.0%
CTGACTCTATTATAACAGGT+TGG + chr5.1:6371320-6371339 None:intergenic 35.0%
CTTAAATTACTACGACCAAG+AGG + chr5.1:6370306-6370325 None:intergenic 35.0%
CTTGGTCGTAGTAATTTAAG+TGG - chr5.1:6370306-6370325 MS.gene21523:CDS 35.0%
GATACAAAACTGACATTGGT+GGG - chr5.1:6369268-6369287 MS.gene21523:CDS 35.0%
GGAACCACCTATATTGATAT+TGG + chr5.1:6369551-6369570 None:intergenic 35.0%
GTGATCATAAAGGACATTCT+GGG + chr5.1:6371687-6371706 None:intergenic 35.0%
GTTAAGAGTGGTGAAGATTT+AGG - chr5.1:6368800-6368819 MS.gene21523:CDS 35.0%
TAAAACCAAGTCAATGGGAT+GGG - chr5.1:6371373-6371392 MS.gene21523:CDS 35.0%
TAACGATGAAGCTTCAAAAG+TGG - chr5.1:6369126-6369145 MS.gene21523:CDS 35.0%
TATAATAGAGTCAGCCAACT+TGG - chr5.1:6371326-6371345 MS.gene21523:CDS 35.0%
TCACAGATAAAACTTCCAGA+AGG + chr5.1:6371422-6371441 None:intergenic 35.0%
TCATCACAAACCAACATTGA+TGG + chr5.1:6368626-6368645 None:intergenic 35.0%
TCTTGTGTACTCAAAAATGG+GGG - chr5.1:6371212-6371231 MS.gene21523:CDS 35.0%
TGAAGACTGTAGCTTGAAAA+AGG - chr5.1:6369057-6369076 MS.gene21523:CDS 35.0%
TGAAGCTTCAAAAGTGGAAT+TGG - chr5.1:6369132-6369151 MS.gene21523:CDS 35.0%
TGTTGTCATGGTGATCATAA+AGG + chr5.1:6371697-6371716 None:intergenic 35.0%
TTAAAACCAAGTCAATGGGA+TGG - chr5.1:6371372-6371391 MS.gene21523:CDS 35.0%
TTATCTGATCAAGTGGATGT+GGG - chr5.1:6368962-6368981 MS.gene21523:CDS 35.0%
TTATGATCACCATGACAACA+GGG - chr5.1:6371697-6371716 MS.gene21523:CDS 35.0%
TTTAAACCAACATCCATTGG+TGG - chr5.1:6370036-6370055 MS.gene21523:CDS 35.0%
TTTATGATCACCATGACAAC+AGG - chr5.1:6371696-6371715 MS.gene21523:CDS 35.0%
! AACAACAGTAATCTTTGGGA+TGG - chr5.1:6371527-6371546 MS.gene21523:CDS 35.0%
! ACTCTATTATAACAGGTTGG+AGG + chr5.1:6371317-6371336 None:intergenic 35.0%
! AGAGATTTTCCACGTTTATG+TGG - chr5.1:6369634-6369653 MS.gene21523:CDS 35.0%
! ATCTTATATATCAGAGGCAC+GGG - chr5.1:6369477-6369496 MS.gene21523:CDS 35.0%
! CGCGTTTTTGATATTTCCTA+CGG - chr5.1:6371032-6371051 MS.gene21523:CDS 35.0%
! CTCTATTATAACAGGTTGGA+GGG + chr5.1:6371316-6371335 None:intergenic 35.0%
! GCGTTTTTGATATTTCCTAC+GGG - chr5.1:6371033-6371052 MS.gene21523:CDS 35.0%
! TACAATTACAGCCTTTTGGA+GGG + chr5.1:6371163-6371182 None:intergenic 35.0%
! TCAATTGGATGTGCGTATTT+TGG - chr5.1:6369234-6369253 MS.gene21523:CDS 35.0%
! TCCTCATGTCATGTTATTTG+CGG - chr5.1:6371721-6371740 MS.gene21523:CDS 35.0%
! TGAAGGAGGCTTTAACTAAA+AGG - chr5.1:6369581-6369600 MS.gene21523:CDS 35.0%
! TGCAACTAGTATTGTTGCTT+CGG - chr5.1:6370647-6370666 MS.gene21523:CDS 35.0%
! TGTTTGTAGAAAGCTTTTGC+AGG - chr5.1:6370389-6370408 MS.gene21523:CDS 35.0%
! TGTTTTCCTCACTTTATTCC+GGG + chr5.1:6370352-6370371 None:intergenic 35.0%
! TTACATAACCACGTGGTTTT+GGG + chr5.1:6370275-6370294 None:intergenic 35.0%
! TTGGCTGACTCTATTATAAC+AGG + chr5.1:6371324-6371343 None:intergenic 35.0%
! TTTACATAACCACGTGGTTT+TGG + chr5.1:6370276-6370295 None:intergenic 35.0%
!! GGATGTTGGTTTAAATTTGG+GGG + chr5.1:6370031-6370050 None:intergenic 35.0%
!! GTTTTGATATATACAGGGCA+GGG - chr5.1:6370702-6370721 MS.gene21523:CDS 35.0%
!! TCAAACTACTTTCGAGTTCT+GGG + chr5.1:6369933-6369952 None:intergenic 35.0%
!! TTCAAACTACTTTCGAGTTC+TGG + chr5.1:6369934-6369953 None:intergenic 35.0%
!!! TGTTTTGATATATACAGGGC+AGG - chr5.1:6370701-6370720 MS.gene21523:CDS 35.0%
AAAACCAAGTCAATGGGATG+GGG - chr5.1:6371374-6371393 MS.gene21523:CDS 40.0%
AAGAGTGGTGAAGATTTAGG+TGG - chr5.1:6368803-6368822 MS.gene21523:CDS 40.0%
AAGGAAGCTGAACAAAGAAC+TGG - chr5.1:6371467-6371486 MS.gene21523:CDS 40.0%
AATCTATACCACCCTGAATC+TGG + chr5.1:6370602-6370621 None:intergenic 40.0%
AATGAAGGGGAGAAGATCAT+GGG - chr5.1:6370504-6370523 MS.gene21523:CDS 40.0%
AATTCTGTTAGGGTGATACG+GGG - chr5.1:6370813-6370832 MS.gene21523:CDS 40.0%
ACATTCTGGGCATAGAGATT+GGG + chr5.1:6371674-6371693 None:intergenic 40.0%
ACCATCTACTGAGATGAGAT+TGG - chr5.1:6369825-6369844 MS.gene21523:CDS 40.0%
ACTTGATCAGATAAGACCAC+AGG + chr5.1:6368956-6368975 None:intergenic 40.0%
ACTTTCCGACGCTTAAACTT+AGG + chr5.1:6368713-6368732 None:intergenic 40.0%
AGAAGATCAGAAGCTTGAAC+GGG - chr5.1:6370755-6370774 MS.gene21523:CDS 40.0%
AGCTTCAAAAGTGGAATTGG+TGG - chr5.1:6369135-6369154 MS.gene21523:CDS 40.0%
AGGGAGCTATGTTAATGAAG+GGG - chr5.1:6370491-6370510 MS.gene21523:CDS 40.0%
AGTCATATTGGCAGGATATG+GGG - chr5.1:6370895-6370914 MS.gene21523:CDS 40.0%
ATGGTGTTCACAGCACATAT+GGG + chr5.1:6371071-6371090 None:intergenic 40.0%
CAATTGATGAGATGAGACCA+TGG + chr5.1:6369221-6369240 None:intergenic 40.0%
CAGAAGATCAGAAGCTTGAA+CGG - chr5.1:6370754-6370773 MS.gene21523:CDS 40.0%
CATGGGTCAATTAGTAACAC+GGG - chr5.1:6370200-6370219 MS.gene21523:CDS 40.0%
CATGGTCTCATCTCATCAAT+TGG - chr5.1:6369219-6369238 MS.gene21523:CDS 40.0%
CGAGGTCAAGAATTCTGTTA+GGG - chr5.1:6370803-6370822 MS.gene21523:CDS 40.0%
CGGTATGGAAACTTCAGATA+TGG - chr5.1:6369420-6369439 MS.gene21523:CDS 40.0%
CTTATCTGATCAAGTGGATG+TGG - chr5.1:6368961-6368980 MS.gene21523:CDS 40.0%
CTTGAAAAAGGAAGATCCTG+TGG - chr5.1:6369069-6369088 MS.gene21523:CDS 40.0%
CTTGAACTTAAGTGCGAATC+TGG + chr5.1:6371569-6371588 None:intergenic 40.0%
CTTGTGTACTCAAAAATGGG+GGG - chr5.1:6371213-6371232 MS.gene21523:CDS 40.0%
GAAAGTAGTGCTAGGTTTGA+TGG - chr5.1:6369969-6369988 MS.gene21523:CDS 40.0%
GAACAAATATCAGATCCCCA+AGG + chr5.1:6370009-6370028 None:intergenic 40.0%
GAATTCTGTTAGGGTGATAC+GGG - chr5.1:6370812-6370831 MS.gene21523:CDS 40.0%
GAGTCATATTGGCAGGATAT+GGG - chr5.1:6370894-6370913 MS.gene21523:CDS 40.0%
GAGTCTACTTTGGCAAATGA+CGG - chr5.1:6369376-6369395 MS.gene21523:CDS 40.0%
GATAAAACTTCCAGAAGGGA+TGG + chr5.1:6371417-6371436 None:intergenic 40.0%
GCTTCAAAAGTGGAATTGGT+GGG - chr5.1:6369136-6369155 MS.gene21523:CDS 40.0%
GGAAAACATGAACACCGTTA+AGG - chr5.1:6369876-6369895 MS.gene21523:CDS 40.0%
GGGACAATATTGCAACAATC+AGG + chr5.1:6371143-6371162 None:intergenic 40.0%
GGTGATCATAAAGGACATTC+TGG + chr5.1:6371688-6371707 None:intergenic 40.0%
GTACACAAGAACATTTCTCG+TGG + chr5.1:6371202-6371221 None:intergenic 40.0%
TAATGAAGGGGAGAAGATCA+TGG - chr5.1:6370503-6370522 MS.gene21523:CDS 40.0%
TATGGTGTTCACAGCACATA+TGG + chr5.1:6371072-6371091 None:intergenic 40.0%
TCTCATCTCATCAAGTGGAT+GGG - chr5.1:6369092-6369111 MS.gene21523:CDS 40.0%
TGAACCTGCAAAAGTGGAAT+TGG - chr5.1:6369000-6369019 MS.gene21523:CDS 40.0%
TGAAGACTGTAGCTTGAGAA+AGG - chr5.1:6369189-6369208 MS.gene21523:CDS 40.0%
TGAAGTTGAGTCATATTGGC+AGG - chr5.1:6370887-6370906 MS.gene21523:CDS 40.0%
TGACTGTAGTTTGAAGAAGG+AGG - chr5.1:6368928-6368947 MS.gene21523:CDS 40.0%
TGAGTCATATTGGCAGGATA+TGG - chr5.1:6370893-6370912 MS.gene21523:CDS 40.0%
TGCAATATTGTCCCTCCAAA+AGG - chr5.1:6371149-6371168 MS.gene21523:CDS 40.0%
TTAAGTGCGAATCTGGCAAA+AGG + chr5.1:6371562-6371581 None:intergenic 40.0%
TTATAAACCAGCTTCCCATG+TGG + chr5.1:6370921-6370940 None:intergenic 40.0%
TTCTACAAACAGCTTGGAAC+AGG + chr5.1:6370380-6370399 None:intergenic 40.0%
TTGTGTACTCAAAAATGGGG+GGG - chr5.1:6371214-6371233 MS.gene21523:CDS 40.0%
! AACTAGTATTGTTGCTTCGG+GGG - chr5.1:6370650-6370669 MS.gene21523:CDS 40.0%
! AGATTTAGGTGGTGGTGATT+CGG - chr5.1:6368814-6368833 MS.gene21523:CDS 40.0%
! CAACTAGTATTGTTGCTTCG+GGG - chr5.1:6370649-6370668 MS.gene21523:CDS 40.0%
! GCAACTAGTATTGTTGCTTC+GGG - chr5.1:6370648-6370667 MS.gene21523:CDS 40.0%
! GTACAATTACAGCCTTTTGG+AGG + chr5.1:6371164-6371183 None:intergenic 40.0%
! TAGAAAGCTTTTGCAGGAAG+CGG - chr5.1:6370395-6370414 MS.gene21523:CDS 40.0%
! TCAAGTGGATGGGGATATTT+TGG - chr5.1:6369102-6369121 MS.gene21523:CDS 40.0%
! TTCTGCTGTTCGTGATTTTC+CGG - chr5.1:6368733-6368752 MS.gene21523:CDS 40.0%
!! AGTTGATTTTTATGCCCACC+TGG - chr5.1:6370083-6370102 MS.gene21523:CDS 40.0%
!! ATACTGCTTTTGTGGTTCTG+TGG - chr5.1:6371835-6371854 MS.gene21523:CDS 40.0%
!! TGCTTTGAAGAATAGTAGCG+AGG - chr5.1:6370785-6370804 MS.gene21523:CDS 40.0%
!! TGTGGTCTTATCTGATCAAG+TGG - chr5.1:6368955-6368974 MS.gene21523:CDS 40.0%
!!! AACGCTGCAACTTTTTTACG+AGG + chr5.1:6369613-6369632 None:intergenic 40.0%
!!! CTCTTTTCTTTTTCAACGGC+TGG + chr5.1:6370161-6370180 None:intergenic 40.0%
AAAACTGCGACCAAGTCCAA+AGG - chr5.1:6370114-6370133 MS.gene21523:CDS 45.0%
AAGATCATGGGATCAGTTCC+TGG - chr5.1:6370516-6370535 MS.gene21523:CDS 45.0%
AAGCCTCTAGTCTATGAGTG+TGG - chr5.1:6371275-6371294 MS.gene21523:CDS 45.0%
ACCTGCAAAAGTGGAATTGG+TGG - chr5.1:6369003-6369022 MS.gene21523:CDS 45.0%
ACTTGATGAGATGAGACCAC+AGG + chr5.1:6369088-6369107 None:intergenic 45.0%
AGAATTAGGGAAGCCAGTGA+TGG - chr5.1:6368658-6368677 MS.gene21523:CDS 45.0%
AGATCATGGGATCAGTTCCT+GGG - chr5.1:6370517-6370536 MS.gene21523:CDS 45.0%
AGCCTCTAGTCTATGAGTGT+GGG - chr5.1:6371276-6371295 MS.gene21523:CDS 45.0%
AGGGAATGCAGTCAAGAAGT+TGG - chr5.1:6369792-6369811 MS.gene21523:CDS 45.0%
AGTAGTTTGAAGGTCTCACC+AGG - chr5.1:6369943-6369962 MS.gene21523:CDS 45.0%
AGTGGTGAAGATTTAGGTGG+TGG - chr5.1:6368806-6368825 MS.gene21523:CDS 45.0%
ATCCGCCTAAGTTTAAGCGT+CGG - chr5.1:6368705-6368724 MS.gene21523:CDS 45.0%
ATCGTAAGTCAGCTCTTGCA+AGG + chr5.1:6371762-6371781 None:intergenic 45.0%
ATGAACACCGTTAAGGTCGA+GGG - chr5.1:6369883-6369902 MS.gene21523:CDS 45.0%
ATTCTGGGCATAGAGATTGG+GGG + chr5.1:6371672-6371691 None:intergenic 45.0%
CAACGATGAACCTGCAAAAG+TGG - chr5.1:6368994-6369013 MS.gene21523:CDS 45.0%
CATTCTGGGCATAGAGATTG+GGG + chr5.1:6371673-6371692 None:intergenic 45.0%
CCTGCAAAAGTGGAATTGGT+GGG - chr5.1:6369004-6369023 MS.gene21523:CDS 45.0%
CGTTCAAGCTTCTGATCTTC+TGG + chr5.1:6370756-6370775 None:intergenic 45.0%
CTCATCTCATCAAGTGGATG+GGG - chr5.1:6369093-6369112 MS.gene21523:CDS 45.0%
CTTGAGAAAGGAAGATCCCA+TGG - chr5.1:6369201-6369220 MS.gene21523:CDS 45.0%
GAAGATCAGAAGCTTGAACG+GGG - chr5.1:6370756-6370775 MS.gene21523:CDS 45.0%
GAATTCGGAGCCATCAATGT+TGG - chr5.1:6368613-6368632 MS.gene21523:CDS 45.0%
GACATTCTGGGCATAGAGAT+TGG + chr5.1:6371675-6371694 None:intergenic 45.0%
GAGTCTCCATTTACCATCAC+TGG + chr5.1:6368674-6368693 None:intergenic 45.0%
GATCAAGTTCGTGATTCCGA+TGG - chr5.1:6371797-6371816 MS.gene21523:CDS 45.0%
GCCAATCTCATCTCAGTAGA+TGG + chr5.1:6369829-6369848 None:intergenic 45.0%
GCCGCAAATAACATGACATG+AGG + chr5.1:6371725-6371744 None:intergenic 45.0%
GCGAGGTCAAGAATTCTGTT+AGG - chr5.1:6370802-6370821 MS.gene21523:CDS 45.0%
GGAAGCTGTGGATATGGAAT+TGG - chr5.1:6369162-6369181 MS.gene21523:CDS 45.0%
GTACCATCAGCAGAACCAAA+CGG + chr5.1:6368770-6368789 None:intergenic 45.0%
GTCTCATCTCATCAAGTGGA+TGG - chr5.1:6369091-6369110 MS.gene21523:CDS 45.0%
TCCAGAAGGGATGGAATTCA+AGG + chr5.1:6371408-6371427 None:intergenic 45.0%
TCCTTGAATTCCATCCCTTC+TGG - chr5.1:6371404-6371423 MS.gene21523:CDS 45.0%
TCGTAAGTCAGCTCTTGCAA+GGG + chr5.1:6371761-6371780 None:intergenic 45.0%
TCTGTACCACCAATGGATGT+TGG + chr5.1:6370045-6370064 None:intergenic 45.0%
TGATAGTCCCAACGACGAAA+AGG - chr5.1:6368844-6368863 MS.gene21523:CDS 45.0%
TGATGTTCCCTCGACCTTAA+CGG + chr5.1:6369893-6369912 None:intergenic 45.0%
TGGTTCCAGTGCTTGTATGA+AGG - chr5.1:6369564-6369583 MS.gene21523:CDS 45.0%
TGTGGTCTCATCTCATCAAG+TGG - chr5.1:6369087-6369106 MS.gene21523:CDS 45.0%
TTCCAGTGCTTGTATGAAGG+AGG - chr5.1:6369567-6369586 MS.gene21523:CDS 45.0%
TTCCGACGCTTAAACTTAGG+CGG + chr5.1:6368710-6368729 None:intergenic 45.0%
TTGATATATACAGGGCAGGG+TGG - chr5.1:6370705-6370724 MS.gene21523:CDS 45.0%
TTTGAAGAAGGAGGATCCTG+TGG - chr5.1:6368937-6368956 MS.gene21523:CDS 45.0%
! AAAACTGACATTGGTGGGCA+TGG - chr5.1:6369273-6369292 MS.gene21523:CDS 45.0%
! AAAAGTGGAATTGGTGGGCA+TGG - chr5.1:6369141-6369160 MS.gene21523:CDS 45.0%
! ACTAGTATTGTTGCTTCGGG+GGG - chr5.1:6370651-6370670 MS.gene21523:CDS 45.0%
! ATTTTTATGCCCACCTGGAC+AGG - chr5.1:6370088-6370107 MS.gene21523:CDS 45.0%
! CACTTTTGCAGGTTCATCGT+TGG + chr5.1:6368996-6369015 None:intergenic 45.0%
! CGTGATTTTCCGGAAGAATG+TGG - chr5.1:6368743-6368762 MS.gene21523:CDS 45.0%
! GATTTAGGTGGTGGTGATTC+GGG - chr5.1:6368815-6368834 MS.gene21523:CDS 45.0%
! GGGAATTTTCTCTTTCCCGT+AGG + chr5.1:6371051-6371070 None:intergenic 45.0%
! GTTCTGTGGAATGTACTGGT+AGG - chr5.1:6371849-6371868 MS.gene21523:CDS 45.0%
! TGAGGATCCTTTTCGTCGTT+GGG + chr5.1:6368854-6368873 None:intergenic 45.0%
! TGTGGTTCTGTGGAATGTAC+TGG - chr5.1:6371845-6371864 MS.gene21523:CDS 45.0%
! TTGAGGATCCTTTTCGTCGT+TGG + chr5.1:6368855-6368874 None:intergenic 45.0%
!! AAAAGTGTCCCAAAACCACG+TGG - chr5.1:6370264-6370283 MS.gene21523:CDS 45.0%
!! ACGAGTGTTGAGGTTAAGAG+TGG - chr5.1:6368788-6368807 MS.gene21523:CDS 45.0%
!!! AGTTTTAGACCTGTCCAGGT+GGG + chr5.1:6370100-6370119 None:intergenic 45.0%
!!! GCTGCAACTTTTTTACGAGG+AGG + chr5.1:6369610-6369629 None:intergenic 45.0%
ACTATCGATGCCGCTCAGTT+TGG - chr5.1:6371614-6371633 MS.gene21523:CDS 50.0%
AGAGATTGGGGGAGCAACTA+TGG + chr5.1:6371661-6371680 None:intergenic 50.0%
AGCCTCCTTCATACAAGCAC+TGG + chr5.1:6369572-6369591 None:intergenic 50.0%
AGGGGGGTTCTCTTCATCTA+TGG + chr5.1:6371090-6371109 None:intergenic 50.0%
AGTTCCTTCCAAGCAAGCTC+TGG + chr5.1:6370972-6370991 None:intergenic 50.0%
CAGCCAGGATGAGTGTCTAA+AGG - chr5.1:6369675-6369694 MS.gene21523:CDS 50.0%
CATGAACACCGTTAAGGTCG+AGG - chr5.1:6369882-6369901 MS.gene21523:CDS 50.0%
CATGAGGAACCCTGTTGTCA+TGG + chr5.1:6371709-6371728 None:intergenic 50.0%
CCAAACGGTCCACATTCTTC+CGG + chr5.1:6368755-6368774 None:intergenic 50.0%
CCCCACATTACCAAACTGAG+CGG + chr5.1:6371627-6371646 None:intergenic 50.0%
CCTGTCATCTGTACCACCAA+TGG + chr5.1:6370052-6370071 None:intergenic 50.0%
GATCATGGGATCAGTTCCTG+GGG - chr5.1:6370518-6370537 MS.gene21523:CDS 50.0%
GCATTGCGTCCACATAAACG+TGG + chr5.1:6369646-6369665 None:intergenic 50.0%
GCGAAGTCAGAATGTCCTTG+GGG - chr5.1:6369991-6370010 MS.gene21523:CDS 50.0%
GCTCCTTTAGACACTCATCC+TGG + chr5.1:6369681-6369700 None:intergenic 50.0%
GGAGACTTTGGATGCGGAAT+TGG - chr5.1:6369294-6369313 MS.gene21523:CDS 50.0%
GGCGAAGTCAGAATGTCCTT+GGG - chr5.1:6369990-6370009 MS.gene21523:CDS 50.0%
GGGAAGCCAGTGATGGTAAA+TGG - chr5.1:6368665-6368684 MS.gene21523:CDS 50.0%
GGTGGTACAGATGACAGGAA+GGG - chr5.1:6370054-6370073 MS.gene21523:CDS 50.0%
GTTTCGCTTGCGAAGAAAGC+CGG - chr5.1:6370941-6370960 MS.gene21523:CDS 50.0%
TAAGTCAGCTCTTGCAAGGG+AGG + chr5.1:6371758-6371777 None:intergenic 50.0%
TACTGAGATGAGATTGGCGC+TGG - chr5.1:6369831-6369850 MS.gene21523:CDS 50.0%
TCAGTTCCTGGGGTTGAAGT+TGG - chr5.1:6370528-6370547 MS.gene21523:CDS 50.0%
TCATCACCAACTTCAACCCC+AGG + chr5.1:6370537-6370556 None:intergenic 50.0%
TGGAGAGGTTCTTGAGGACA+AGG - chr5.1:6371448-6371467 MS.gene21523:CDS 50.0%
TGGCGAAGTCAGAATGTCCT+TGG - chr5.1:6369989-6370008 MS.gene21523:CDS 50.0%
TGGTCATGAGAGTGACTCAG+TGG - chr5.1:6370326-6370345 MS.gene21523:CDS 50.0%
TGGTGGTACAGATGACAGGA+AGG - chr5.1:6370053-6370072 MS.gene21523:CDS 50.0%
TTTCGCTTGCGAAGAAAGCC+GGG - chr5.1:6370942-6370961 MS.gene21523:CDS 50.0%
! ATTGGTGGGCATGGAGACTT+TGG - chr5.1:6369282-6369301 MS.gene21523:CDS 50.0%
! ATTGGTGGGCGTAGAAGCTA+TGG - chr5.1:6369018-6369037 MS.gene21523:CDS 50.0%
! CCATTGGTGGTACAGATGAC+AGG - chr5.1:6370049-6370068 MS.gene21523:CDS 50.0%
! GGCGCTGGATAATCATCATC+AGG - chr5.1:6369846-6369865 MS.gene21523:CDS 50.0%
! TACACCCCATCCCATTGACT+TGG + chr5.1:6371381-6371400 None:intergenic 50.0%
! TCAACCAGAGCTTGCTTGGA+AGG - chr5.1:6370965-6370984 MS.gene21523:CDS 50.0%
! TGCTGATGGTACGAGTGTTG+AGG - chr5.1:6368778-6368797 MS.gene21523:CDS 50.0%
!! AAATGACGGACCTGCAGAAC+TGG - chr5.1:6369390-6369409 MS.gene21523:CDS 50.0%
!! AGAACTGGCATTGGTCGGTA+TGG - chr5.1:6369405-6369424 MS.gene21523:CDS 50.0%
!! CCCACCAATTCCACTTTTGC+AGG + chr5.1:6369007-6369026 None:intergenic 50.0%
!! CCGCTCAGTTTGGTAATGTG+GGG - chr5.1:6371624-6371643 MS.gene21523:CDS 50.0%
!! GCCGCTCAGTTTGGTAATGT+GGG - chr5.1:6371623-6371642 MS.gene21523:CDS 50.0%
!! GTTGGAGGGCACTTGCATTT+AGG + chr5.1:6371302-6371321 None:intergenic 50.0%
!! TGCCGCTCAGTTTGGTAATG+TGG - chr5.1:6371622-6371641 MS.gene21523:CDS 50.0%
!!! CAGTTTTAGACCTGTCCAGG+TGG + chr5.1:6370101-6370120 None:intergenic 50.0%
!!! TCGCAGTTTTAGACCTGTCC+AGG + chr5.1:6370104-6370123 None:intergenic 50.0%
ACACTCATCCTGGCTGAGAC+GGG + chr5.1:6369671-6369690 None:intergenic 55.0%
ATGAGAGTGACTCAGTGGCC+CGG - chr5.1:6370331-6370350 MS.gene21523:CDS 55.0%
CACCCTGAATCTGGCGATGA+AGG + chr5.1:6370593-6370612 None:intergenic 55.0%
CAGTGGCCCGGAATAAAGTG+AGG - chr5.1:6370343-6370362 MS.gene21523:CDS 55.0%
CCAGGCAGGAAAGTAGTGCT+AGG - chr5.1:6369961-6369980 MS.gene21523:CDS 55.0%
CCGGAAGAATGTGGACCGTT+TGG - chr5.1:6368752-6368771 MS.gene21523:CDS 55.0%
CCTAGCACTACTTTCCTGCC+TGG + chr5.1:6369964-6369983 None:intergenic 55.0%
CTTCATCGCCAGATTCAGGG+TGG - chr5.1:6370591-6370610 MS.gene21523:CDS 55.0%
GACACTCATCCTGGCTGAGA+CGG + chr5.1:6369672-6369691 None:intergenic 55.0%
GACATAGCTACCTCGCCAAC+TGG + chr5.1:6369505-6369524 None:intergenic 55.0%
GGCCCACACTCATAGACTAG+AGG + chr5.1:6371281-6371300 None:intergenic 55.0%
GGCCTTCATCGCCAGATTCA+GGG - chr5.1:6370588-6370607 MS.gene21523:CDS 55.0%
GGGCATGGAAGCTGTGGATA+TGG - chr5.1:6369156-6369175 MS.gene21523:CDS 55.0%
GGGCATGGAGACTTTGGATG+CGG - chr5.1:6369288-6369307 MS.gene21523:CDS 55.0%
GTTTGAAGGTCTCACCAGGC+AGG - chr5.1:6369947-6369966 MS.gene21523:CDS 55.0%
TGGCCTTCATCGCCAGATTC+AGG - chr5.1:6370587-6370606 MS.gene21523:CDS 55.0%
! ATTGGTGGGCATGGAAGCTG+TGG - chr5.1:6369150-6369169 MS.gene21523:CDS 55.0%
! CAAGCAAGCTCTGGTTGACC+CGG + chr5.1:6370963-6370982 None:intergenic 55.0%
!! CCTGCAGAACTGGCATTGGT+CGG - chr5.1:6369400-6369419 MS.gene21523:CDS 55.0%
!! GATACGGGGCTCTGAATCAG+CGG - chr5.1:6370827-6370846 MS.gene21523:CDS 55.0%
!! GGACCGTTTGGTTCTGCTGA+TGG - chr5.1:6368764-6368783 MS.gene21523:CDS 55.0%
CACTCATCCTGGCTGAGACG+GGG + chr5.1:6369670-6369689 None:intergenic 60.0%
CCGACCAATGCCAGTTCTGC+AGG + chr5.1:6369403-6369422 None:intergenic 60.0%
CGGACCTGCAGAACTGGCAT+TGG - chr5.1:6369396-6369415 MS.gene21523:CDS 60.0%
GGCAGGATATGGGGCCACAT+GGG - chr5.1:6370904-6370923 MS.gene21523:CDS 60.0%
TATGGGGCCACATGGGAAGC+TGG - chr5.1:6370911-6370930 MS.gene21523:CDS 60.0%
TGGCAGGATATGGGGCCACA+TGG - chr5.1:6370903-6370922 MS.gene21523:CDS 60.0%
! CGGGTCAACCAGAGCTTGCT+TGG - chr5.1:6370961-6370980 MS.gene21523:CDS 60.0%
CAATGCTCCCCGTCTCAGCC+AGG - chr5.1:6369660-6369679 MS.gene21523:CDS 65.0%
! TCAGAGGCACGGGCTCCAGT+TGG - chr5.1:6369487-6369506 MS.gene21523:CDS 65.0%
!! CGGGGCTCTGAATCAGCGGA+TGG - chr5.1:6370831-6370850 MS.gene21523:CDS 65.0%
GGCACGGGCTCCAGTTGGCG+AGG - chr5.1:6369492-6369511 MS.gene21523:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 6368611 6371880 6368611 ID=MS.gene21523
chr5.1 mRNA 6368611 6371880 6368611 ID=MS.gene21523.t1;Parent=MS.gene21523
chr5.1 exon 6368611 6371880 6368611 ID=MS.gene21523.t1.exon1;Parent=MS.gene21523.t1
chr5.1 CDS 6368611 6371880 6368611 ID=cds.MS.gene21523.t1;Parent=MS.gene21523.t1
Gene Sequence

>MS.gene21523

ATGAATTCGGAGCCATCAATGTTGGTTTGTGATGAACATTCTGAAGAAGAATTAGGGAAGCCAGTGATGGTAAATGGAGACTCAACTATTGTTGATCCGCCTAAGTTTAAGCGTCGGAAAGTTTCTGCTGTTCGTGATTTTCCGGAAGAATGTGGACCGTTTGGTTCTGCTGATGGTACGAGTGTTGAGGTTAAGAGTGGTGAAGATTTAGGTGGTGGTGATTCGGGTGAAGCTGATAGTCCCAACGACGAAAAGGATCCTCAAAATTTTGAGTTCAATGAAGATTTGTTTGTTGCAGACACTGTTGAACAAACAAGTGACTGTAGTTTGAAGAAGGAGGATCCTGTGGTCTTATCTGATCAAGTGGATGTGGGTAGTTTTGCCAACGATGAACCTGCAAAAGTGGAATTGGTGGGCGTAGAAGCTATGGATATTAGTTTTGAAACTGAAGACTGTAGCTTGAAAAAGGAAGATCCTGTGGTCTCATCTCATCAAGTGGATGGGGATATTTTGGTTAACGATGAAGCTTCAAAAGTGGAATTGGTGGGCATGGAAGCTGTGGATATGGAATTGGAAACTGAAGACTGTAGCTTGAGAAAGGAAGATCCCATGGTCTCATCTCATCAATTGGATGTGCGTATTTTGGATAATAACGAAGATACAAAACTGACATTGGTGGGCATGGAGACTTTGGATGCGGAATTGGCAACTGAAAGCTGTAGTTTGAAGAACGAAAATGCAGCGATCTTATCTTATCAAATTGATGAGTCTACTTTGGCAAATGACGGACCTGCAGAACTGGCATTGGTCGGTATGGAAACTTCAGATATGGAATTTACAACAGAAGGCTCCGTAAAACAAGATTTATCTTATATATCAGAGGCACGGGCTCCAGTTGGCGAGGTAGCTATGTCTGATAACTCAAAATCCTCGTTGTCCAATATCAATATAGGTGGTTCCAGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATCCTCCTCGTAAAAAAGTTGCAGCGTTAAGAGATTTTCCACGTTTATGTGGACGCAATGCTCCCCGTCTCAGCCAGGATGAGTGTCTAAAGGAGCTCGCTTCTTTGAAAGAAGTTGCAGCTACTGACCTACAAGAAGCAGAAAATAACAAAAGAAAGTTTGCCAACTTTGTTGAAGCTGATTTTGAAGGGAATGCAGTCAAGAAGTTGGATGTAGCTGAACCATCTACTGAGATGAGATTGGCGCTGGATAATCATCATCAGGTTAAAGCGGAAAACATGAACACCGTTAAGGTCGAGGGAACATCAGAGCTAGATATTGATTACCCAGAACTCGAAAGTAGTTTGAAGGTCTCACCAGGCAGGAAAGTAGTGCTAGGTTTGATGGCGAAGTCAGAATGTCCTTGGGGATCTGATATTTGTTCCCCCAAATTTAAACCAACATCCATTGGTGGTACAGATGACAGGAAGGGAAAGAAAGTTGATTTTTATGCCCACCTGGACAGGTCTAAAACTGCGACCAAGTCCAAAGGTGTACTAAATCATTCTGGGCACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGATGACATGGGTCAATTAGTAACACGGGAGAAGAATTCTCTAGATCCTAATGAAAATAACAAACACTTTAAAAGTGTCCCAAAACCACGTGGTTATGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTAAGTGGTCATGAGAGTGACTCAGTGGCCCGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCAAGCTGTTTGTAGAAAGCTTTTGCAGGAAGCGGAAGCAAAACCAAAGTCAAATGTGAAAGAATCAAAGAGGGTTGATTTACAAGCTTCAAAAATACTTAAGGAGAAAGGGAGCTATGTTAATGAAGGGGAGAAGATCATGGGATCAGTTCCTGGGGTTGAAGTTGGTGATGAATTTCAATACAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATATGAAGCAAAAAAACAAGGTCCTTGCAACTAGTATTGTTGCTTCGGGGGGATATGCTGATGACTTAGATAATGCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAGAAGCTTGAACGGGGCAATCTTGCTTTGAAGAATAGTAGCGAGGTCAAGAATTCTGTTAGGGTGATACGGGGCTCTGAATCAGCGGATGGAAAAAGCAAGATATATGTTTACGATGGACTCTATGAAGTTGAGTCATATTGGCAGGATATGGGGCCACATGGGAAGCTGGTTTATAAGTTTCGCTTGCGAAGAAAGCCGGGTCAACCAGAGCTTGCTTGGAAGGAACTTAAGAAATCTAAAAAGTTCAACAAAAAAAGAGAAGGTGTACGCGTTTTTGATATTTCCTACGGGAAAGAGAAAATTCCCATATGTGCTGTGAACACCATAGATGAAGAGAACCCCCCTCCATTTAAATACATAACTAAGATGATGTATCCTGATTGTTGCAATATTGTCCCTCCAAAAGGCTGTAATTGTACTAATGGATGCTCTGACCACGAGAAATGTTCTTGTGTACTCAAAAATGGGGGGGAGATTCCATTTAATCATAATGGAGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGGCCTAAATGCAAGTGCCCTCCAACCTGTTATAATAGAGTCAGCCAACTTGGCATAAATATTCAACTCGAAATTTTTAAAACCAAGTCAATGGGATGGGGTGTAAGATCCTTGAATTCCATCCCTTCTGGAAGTTTTATCTGTGAATATATTGGAGAGGTTCTTGAGGACAAGGAAGCTGAACAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACAAAAACAACAGTAATCTTTGGGATGGACTTTCGAACCTTTTGCCAGATTCGCACTTAAGTTCAAGTGAAGTAGTGAATGATGTTGGCTTCACTATCGATGCCGCTCAGTTTGGTAATGTGGGGAGATTTATTAACCATAGTTGCTCCCCCAATCTCTATGCCCAGAATGTCCTTTATGATCACCATGACAACAGGGTTCCTCATGTCATGTTATTTGCGGCTGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGATTACAATTACACGATAGATCAAGTTCGTGATTCCGATGGCAATATCAAAAAGAAATACTGCTTTTGTGGTTCTGTGGAATGTACTGGTAGGTTGTATTGA
Protein sequence

>MS.gene21523.t1

MNSEPSMLVCDEHSEEELGKPVMVNGDSTIVDPPKFKRRKVSAVRDFPEECGPFGSADGTSVEVKSGEDLGGGDSGEADSPNDEKDPQNFEFNEDLFVADTVEQTSDCSLKKEDPVVLSDQVDVGSFANDEPAKVELVGVEAMDISFETEDCSLKKEDPVVSSHQVDGDILVNDEASKVELVGMEAVDMELETEDCSLRKEDPMVSSHQLDVRILDNNEDTKLTLVGMETLDAELATESCSLKNENAAILSYQIDESTLANDGPAELALVGMETSDMEFTTEGSVKQDLSYISEARAPVGEVAMSDNSKSSLSNINIGGSSACMKEALTKRYPPRKKVAALRDFPRLCGRNAPRLSQDECLKELASLKEVAATDLQEAENNKRKFANFVEADFEGNAVKKLDVAEPSTEMRLALDNHHQVKAENMNTVKVEGTSELDIDYPELESSLKVSPGRKVVLGLMAKSECPWGSDICSPKFKPTSIGGTDDRKGKKVDFYAHLDRSKTATKSKGVLNHSGHQPLKKKRENSSSDDMGQLVTREKNSLDPNENNKHFKSVPKPRGYVNVFPLGRSNLSGHESDSVARNKVRKTLRLFQAVCRKLLQEAEAKPKSNVKESKRVDLQASKILKEKGSYVNEGEKIMGSVPGVEVGDEFQYRIELNIIGLHRQIQGGIDYMKQKNKVLATSIVASGGYADDLDNADVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGSESADGKSKIYVYDGLYEVESYWQDMGPHGKLVYKFRLRRKPGQPELAWKELKKSKKFNKKREGVRVFDISYGKEKIPICAVNTIDEENPPPFKYITKMMYPDCCNIVPPKGCNCTNGCSDHEKCSCVLKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPPTCYNRVSQLGINIQLEIFKTKSMGWGVRSLNSIPSGSFICEYIGEVLEDKEAEQRTGNDEYLFDIGNNKNNSNLWDGLSNLLPDSHLSSSEVVNDVGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHHDNRVPHVMLFAAENIPPLQELTYDYNYTIDQVRDSDGNIKKKYCFCGSVECTGRLY