Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024283.t1 | XP_003624506.2 | 88.8 | 766 | 76 | 4 | 1 | 765 | 1 | 757 | 0.00E+00 | 1151.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024283.t1 | Q8GZB6 | 67.9 | 474 | 147 | 3 | 293 | 765 | 155 | 624 | 3.3e-197 | 689.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024283.t1 | G7KXA0 | 88.8 | 766 | 76 | 4 | 1 | 765 | 1 | 757 | 0.0e+00 | 1151.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene024283.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene034064 | MS.gene024283 | PPI |
MS.gene064936 | MS.gene024283 | PPI |
MS.gene024283 | MS.gene97292 | PPI |
MS.gene21523 | MS.gene024283 | PPI |
MS.gene75370 | MS.gene024283 | PPI |
MS.gene034066 | MS.gene024283 | PPI |
MS.gene60222 | MS.gene024283 | PPI |
MS.gene54619 | MS.gene024283 | PPI |
MS.gene024283 | MS.gene022122 | PPI |
MS.gene056257 | MS.gene024283 | PPI |
MS.gene43161 | MS.gene024283 | PPI |
MS.gene024283 | MS.gene026774 | PPI |
MS.gene75371 | MS.gene024283 | PPI |
MS.gene054186 | MS.gene024283 | PPI |
MS.gene41916 | MS.gene024283 | PPI |
MS.gene059422 | MS.gene024283 | PPI |
MS.gene024283 | MS.gene001986 | PPI |
MS.gene037324 | MS.gene024283 | PPI |
MS.gene073953 | MS.gene024283 | PPI |
MS.gene09713 | MS.gene024283 | PPI |
MS.gene99744 | MS.gene024283 | PPI |
MS.gene026775 | MS.gene024283 | PPI |
MS.gene53578 | MS.gene024283 | PPI |
MS.gene029242 | MS.gene024283 | PPI |
MS.gene024283 | MS.gene23870 | PPI |
MS.gene024283 | MS.gene054186 | PPI |
MS.gene024283 | MS.gene60223 | PPI |
MS.gene034065 | MS.gene024283 | PPI |
MS.gene64242 | MS.gene024283 | PPI |
MS.gene024283 | MS.gene015375 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024283.t1 | MTR_7g084090 | 90.339 | 766 | 64 | 5 | 1 | 765 | 1 | 757 | 0.0 | 1316 |
MS.gene024283.t1 | MTR_6g061270 | 89.888 | 712 | 51 | 3 | 57 | 765 | 1 | 694 | 0.0 | 1162 |
MS.gene024283.t1 | MTR_6g061200 | 87.904 | 711 | 38 | 4 | 57 | 765 | 1 | 665 | 0.0 | 1114 |
MS.gene024283.t1 | MTR_7g084090 | 89.247 | 651 | 60 | 5 | 1 | 650 | 1 | 642 | 0.0 | 1076 |
MS.gene024283.t1 | MTR_7g052480 | 57.270 | 337 | 137 | 3 | 429 | 765 | 227 | 556 | 8.99e-132 | 402 |
MS.gene024283.t1 | MTR_5g013420 | 41.569 | 510 | 263 | 11 | 260 | 765 | 611 | 1089 | 1.23e-117 | 380 |
MS.gene024283.t1 | MTR_5g013420 | 41.373 | 510 | 264 | 11 | 260 | 765 | 611 | 1089 | 1.96e-116 | 377 |
MS.gene024283.t1 | MTR_4g010830 | 39.923 | 521 | 275 | 13 | 250 | 765 | 493 | 980 | 2.01e-111 | 362 |
MS.gene024283.t1 | MTR_4g010550 | 37.984 | 516 | 258 | 11 | 252 | 765 | 9 | 464 | 1.07e-105 | 332 |
MS.gene024283.t1 | MTR_7g088370 | 38.846 | 520 | 278 | 10 | 246 | 761 | 218 | 701 | 1.40e-102 | 331 |
MS.gene024283.t1 | MTR_3g011440 | 37.282 | 515 | 280 | 15 | 263 | 761 | 173 | 660 | 2.21e-96 | 313 |
MS.gene024283.t1 | MTR_8g070075 | 38.604 | 487 | 257 | 17 | 264 | 735 | 290 | 749 | 3.52e-92 | 305 |
MS.gene024283.t1 | MTR_8g070070 | 37.938 | 485 | 263 | 13 | 266 | 737 | 299 | 758 | 1.16e-91 | 304 |
MS.gene024283.t1 | MTR_1g035420 | 38.446 | 489 | 264 | 14 | 264 | 741 | 189 | 651 | 6.52e-91 | 299 |
MS.gene024283.t1 | MTR_8g042750 | 35.547 | 512 | 290 | 14 | 263 | 761 | 200 | 684 | 1.01e-89 | 296 |
MS.gene024283.t1 | MTR_8g071030 | 38.430 | 484 | 256 | 14 | 267 | 735 | 280 | 736 | 3.82e-89 | 296 |
MS.gene024283.t1 | MTR_6g044690 | 34.413 | 494 | 263 | 16 | 264 | 735 | 109 | 563 | 3.97e-82 | 273 |
MS.gene024283.t1 | MTR_0376s0030 | 31.597 | 576 | 339 | 17 | 172 | 735 | 29 | 561 | 7.99e-76 | 256 |
MS.gene024283.t1 | MTR_1g035400 | 34.195 | 503 | 270 | 16 | 264 | 742 | 106 | 571 | 7.29e-75 | 254 |
MS.gene024283.t1 | MTR_1g048950 | 32.188 | 553 | 277 | 17 | 244 | 765 | 48 | 533 | 1.00e-64 | 226 |
MS.gene024283.t1 | MTR_7g445710 | 32.530 | 498 | 238 | 13 | 284 | 765 | 128 | 543 | 1.03e-60 | 214 |
MS.gene024283.t1 | MTR_7g450730 | 29.668 | 482 | 238 | 9 | 284 | 765 | 125 | 505 | 5.12e-58 | 206 |
MS.gene024283.t1 | MTR_2g054460 | 31.524 | 479 | 248 | 15 | 264 | 735 | 58 | 463 | 7.60e-58 | 204 |
MS.gene024283.t1 | MTR_6g043960 | 29.918 | 488 | 268 | 16 | 266 | 735 | 50 | 481 | 4.30e-57 | 202 |
MS.gene024283.t1 | MTR_7g445530 | 31.263 | 467 | 223 | 13 | 284 | 734 | 128 | 512 | 4.28e-48 | 178 |
MS.gene024283.t1 | MTR_1g080340 | 28.324 | 346 | 166 | 12 | 471 | 763 | 268 | 584 | 5.45e-28 | 120 |
MS.gene024283.t1 | MTR_1g069570 | 30.294 | 340 | 160 | 13 | 472 | 761 | 430 | 742 | 1.21e-27 | 119 |
MS.gene024283.t1 | MTR_5g018850 | 28.485 | 330 | 175 | 10 | 468 | 765 | 1207 | 1507 | 2.16e-27 | 120 |
MS.gene024283.t1 | MTR_8g078490 | 33.772 | 228 | 112 | 7 | 545 | 765 | 1058 | 1253 | 1.04e-26 | 117 |
MS.gene024283.t1 | MTR_4g132610 | 33.766 | 231 | 108 | 7 | 545 | 765 | 852 | 1047 | 7.84e-25 | 111 |
MS.gene024283.t1 | MTR_7g445600 | 36.424 | 151 | 53 | 1 | 584 | 734 | 248 | 355 | 7.26e-24 | 104 |
MS.gene024283.t1 | MTR_8g078505 | 29.866 | 298 | 152 | 10 | 468 | 736 | 248 | 517 | 7.59e-23 | 103 |
MS.gene024283.t1 | MTR_7g098390 | 29.032 | 341 | 161 | 15 | 472 | 761 | 388 | 698 | 1.58e-21 | 100 |
MS.gene024283.t1 | MTR_5g098680 | 34.737 | 190 | 106 | 6 | 291 | 474 | 267 | 444 | 1.33e-20 | 97.4 |
MS.gene024283.t1 | MTR_8g102580 | 33.684 | 190 | 108 | 6 | 291 | 474 | 261 | 438 | 4.94e-19 | 92.4 |
MS.gene024283.t1 | MTR_1g069570 | 29.520 | 271 | 118 | 11 | 472 | 693 | 430 | 676 | 3.40e-18 | 89.7 |
MS.gene024283.t1 | MTR_3g114910 | 33.577 | 137 | 83 | 3 | 335 | 469 | 221 | 351 | 6.07e-14 | 75.1 |
MS.gene024283.t1 | MTR_1g098370 | 27.491 | 291 | 143 | 13 | 475 | 764 | 14 | 237 | 6.75e-12 | 68.9 |
MS.gene024283.t1 | MTR_1g012910 | 29.775 | 178 | 89 | 7 | 588 | 764 | 528 | 670 | 1.27e-11 | 68.6 |
MS.gene024283.t1 | MTR_6g027690 | 27.863 | 262 | 142 | 10 | 505 | 764 | 203 | 419 | 2.81e-11 | 66.6 |
MS.gene024283.t1 | MTR_1g012910 | 29.775 | 178 | 89 | 7 | 588 | 764 | 365 | 507 | 2.89e-11 | 67.0 |
MS.gene024283.t1 | MTR_1g098000 | 29.208 | 202 | 103 | 8 | 564 | 764 | 72 | 234 | 3.97e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024283.t1 | AT5G13960 | 67.396 | 503 | 159 | 3 | 264 | 765 | 126 | 624 | 0.0 | 738 |
MS.gene024283.t1 | AT5G13960 | 67.409 | 494 | 156 | 3 | 273 | 765 | 1 | 490 | 0.0 | 716 |
MS.gene024283.t1 | AT2G22740 | 38.619 | 536 | 278 | 14 | 247 | 765 | 289 | 790 | 2.64e-106 | 343 |
MS.gene024283.t1 | AT2G22740 | 38.619 | 536 | 278 | 14 | 247 | 765 | 289 | 790 | 2.64e-106 | 343 |
MS.gene024283.t1 | AT2G35160 | 39.095 | 486 | 235 | 11 | 286 | 765 | 328 | 758 | 6.08e-104 | 336 |
MS.gene024283.t1 | AT2G35160 | 39.095 | 486 | 235 | 11 | 286 | 765 | 364 | 794 | 1.62e-103 | 336 |
MS.gene024283.t1 | AT2G35160 | 39.095 | 486 | 235 | 11 | 286 | 765 | 364 | 794 | 1.62e-103 | 336 |
MS.gene024283.t1 | AT2G35160 | 39.095 | 486 | 235 | 11 | 286 | 765 | 364 | 794 | 1.62e-103 | 336 |
MS.gene024283.t1 | AT2G35160 | 39.095 | 486 | 235 | 11 | 286 | 765 | 364 | 794 | 1.62e-103 | 336 |
MS.gene024283.t1 | AT1G73100 | 37.500 | 504 | 278 | 11 | 268 | 761 | 189 | 665 | 6.85e-97 | 315 |
MS.gene024283.t1 | AT5G04940 | 35.838 | 519 | 308 | 12 | 246 | 761 | 170 | 666 | 4.51e-92 | 302 |
MS.gene024283.t1 | AT5G04940 | 35.838 | 519 | 308 | 12 | 246 | 761 | 170 | 666 | 4.51e-92 | 302 |
MS.gene024283.t1 | AT2G33290 | 37.037 | 486 | 268 | 11 | 263 | 737 | 182 | 640 | 2.76e-88 | 291 |
MS.gene024283.t1 | AT2G33290 | 37.037 | 486 | 268 | 11 | 263 | 737 | 182 | 640 | 2.76e-88 | 291 |
MS.gene024283.t1 | AT2G33290 | 37.037 | 486 | 268 | 11 | 263 | 737 | 182 | 640 | 2.76e-88 | 291 |
MS.gene024283.t1 | AT2G33290 | 37.037 | 486 | 268 | 11 | 263 | 737 | 182 | 640 | 2.76e-88 | 291 |
MS.gene024283.t1 | AT4G13460 | 37.609 | 460 | 259 | 11 | 286 | 739 | 204 | 641 | 3.76e-88 | 291 |
MS.gene024283.t1 | AT4G13460 | 37.609 | 460 | 259 | 11 | 286 | 739 | 204 | 641 | 3.76e-88 | 291 |
MS.gene024283.t1 | AT1G17770 | 33.401 | 494 | 285 | 13 | 284 | 761 | 224 | 689 | 6.28e-69 | 240 |
MS.gene024283.t1 | AT2G24740 | 34.216 | 491 | 264 | 16 | 284 | 761 | 307 | 751 | 1.17e-62 | 224 |
MS.gene024283.t1 | AT5G47150 | 41.935 | 186 | 96 | 5 | 264 | 447 | 153 | 328 | 3.11e-30 | 122 |
MS.gene024283.t1 | AT5G47160 | 38.764 | 178 | 98 | 4 | 264 | 439 | 239 | 407 | 2.64e-27 | 115 |
MS.gene024283.t1 | AT5G47160 | 38.764 | 178 | 98 | 4 | 264 | 439 | 239 | 407 | 2.64e-27 | 115 |
MS.gene024283.t1 | AT5G47160 | 38.764 | 178 | 98 | 4 | 264 | 439 | 239 | 407 | 2.64e-27 | 115 |
MS.gene024283.t1 | AT2G23740 | 29.141 | 326 | 171 | 11 | 467 | 764 | 1081 | 1374 | 2.08e-26 | 117 |
MS.gene024283.t1 | AT2G23740 | 29.141 | 326 | 171 | 11 | 467 | 764 | 1088 | 1381 | 2.35e-26 | 116 |
MS.gene024283.t1 | AT2G23740 | 29.141 | 326 | 171 | 11 | 467 | 764 | 1088 | 1381 | 2.35e-26 | 116 |
MS.gene024283.t1 | AT2G23740 | 29.141 | 326 | 171 | 11 | 467 | 764 | 1088 | 1381 | 2.35e-26 | 116 |
MS.gene024283.t1 | AT3G04380 | 27.457 | 346 | 166 | 13 | 472 | 763 | 130 | 444 | 1.37e-25 | 111 |
MS.gene024283.t1 | AT3G04380 | 27.457 | 346 | 166 | 13 | 472 | 763 | 119 | 433 | 1.50e-25 | 111 |
MS.gene024283.t1 | AT3G04380 | 27.457 | 346 | 166 | 13 | 472 | 763 | 146 | 460 | 1.59e-25 | 111 |
MS.gene024283.t1 | AT3G04380 | 27.457 | 346 | 166 | 13 | 472 | 763 | 146 | 460 | 2.14e-25 | 111 |
MS.gene024283.t1 | AT3G04380 | 27.457 | 346 | 166 | 13 | 472 | 763 | 103 | 417 | 2.32e-25 | 110 |
MS.gene024283.t1 | AT3G04380 | 27.457 | 346 | 166 | 13 | 472 | 763 | 119 | 433 | 2.65e-25 | 110 |
MS.gene024283.t1 | AT3G03750 | 29.297 | 256 | 126 | 8 | 518 | 764 | 140 | 349 | 9.03e-22 | 98.2 |
MS.gene024283.t1 | AT1G57820 | 35.294 | 187 | 95 | 7 | 279 | 449 | 256 | 432 | 1.78e-20 | 97.1 |
MS.gene024283.t1 | AT1G57820 | 35.294 | 187 | 95 | 7 | 279 | 449 | 256 | 432 | 1.78e-20 | 97.1 |
MS.gene024283.t1 | AT5G39550 | 31.551 | 187 | 102 | 6 | 279 | 449 | 241 | 417 | 8.32e-18 | 88.2 |
MS.gene024283.t1 | AT2G05900 | 28.700 | 223 | 146 | 6 | 304 | 525 | 1 | 211 | 1.83e-17 | 84.7 |
MS.gene024283.t1 | AT2G23740 | 28.235 | 255 | 127 | 9 | 467 | 693 | 1088 | 1314 | 1.90e-17 | 87.8 |
MS.gene024283.t1 | AT2G23740 | 28.235 | 255 | 127 | 9 | 467 | 693 | 1088 | 1314 | 1.90e-17 | 87.8 |
MS.gene024283.t1 | AT1G57820 | 34.225 | 187 | 94 | 8 | 279 | 449 | 256 | 429 | 1.94e-17 | 87.4 |
MS.gene024283.t1 | AT1G66040 | 30.481 | 187 | 104 | 6 | 279 | 449 | 241 | 417 | 1.70e-16 | 84.3 |
MS.gene024283.t1 | AT1G66050 | 30.481 | 187 | 104 | 6 | 279 | 449 | 241 | 417 | 1.91e-16 | 84.0 |
MS.gene024283.t1 | AT1G57800 | 32.275 | 189 | 99 | 8 | 279 | 449 | 268 | 445 | 7.65e-15 | 79.0 |
MS.gene024283.t1 | AT1G57800 | 31.915 | 188 | 97 | 8 | 279 | 449 | 268 | 441 | 1.39e-14 | 78.2 |
MS.gene024283.t1 | AT4G08590 | 30.337 | 178 | 97 | 8 | 279 | 444 | 216 | 378 | 1.91e-11 | 67.4 |
Find 200 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGTGGCCATTGTTATTTC+AGG | 0.244382 | 7.1:+21018645 | MS.gene024283:CDS |
ACACATTGTACAAACAAATT+AGG | 0.303501 | 7.1:-21022607 | None:intergenic |
TGCAGAGTGCTTTACCTTAT+GGG | 0.312172 | 7.1:-21017143 | None:intergenic |
ATAACAATGGCCACAGCAAC+TGG | 0.313591 | 7.1:-21018639 | None:intergenic |
ACTTCTCTTCACACGCTTCC+TGG | 0.317730 | 7.1:-21016340 | None:intergenic |
CTGGCGCACTTTCAGAATCT+TGG | 0.333099 | 7.1:-21022522 | None:intergenic |
GCCGATTTCTTCTTCTTTGT+CGG | 0.333203 | 7.1:-21016450 | None:intergenic |
AGCATATGCTTCAAGTTTGC+TGG | 0.340531 | 7.1:+21022486 | MS.gene024283:CDS |
CAAAATGGGTTACCTGTAAA+GGG | 0.353521 | 7.1:-21022693 | None:intergenic |
GCCCATTCCAGCGACAAATT+TGG | 0.353838 | 7.1:+21021084 | MS.gene024283:CDS |
TGGGCAGAGAAGGGATTATC+TGG | 0.354450 | 7.1:+21020361 | MS.gene024283:CDS |
TGACCTCGAATCACCCTTAC+TGG | 0.360367 | 7.1:-21019862 | None:intergenic |
GAATCCTAAGGTGAAGATTA+AGG | 0.360464 | 7.1:+21016113 | MS.gene024283:CDS |
ACCTTATGGGACTTCTTCCC+TGG | 0.363058 | 7.1:-21017130 | None:intergenic |
GCACTATCTTCATTTGGTTC+AGG | 0.363070 | 7.1:+21016605 | MS.gene024283:CDS |
TAACAAGCACTATCTTCATT+TGG | 0.367159 | 7.1:+21016599 | MS.gene024283:CDS |
TGCATTGATGCAGGGTCTAC+TGG | 0.368143 | 7.1:+21022550 | MS.gene024283:CDS |
AGGAAGTTGAATTACCGTTT+TGG | 0.369207 | 7.1:-21018492 | None:intergenic |
AAAAGAATTGGCAACATTCC+AGG | 0.377376 | 7.1:+21018182 | MS.gene024283:CDS |
TTGGTTATGGCTTTCAGATC+AGG | 0.378299 | 7.1:-21017632 | None:intergenic |
ACCAAATTTGTCGCTGGAAT+GGG | 0.382281 | 7.1:-21021085 | None:intergenic |
TTCGCACATTCACAGGTGTT+TGG | 0.383655 | 7.1:-21021846 | None:intergenic |
TAGTAGGGAGAGTGTGGTTA+AGG | 0.385552 | 7.1:+21016365 | MS.gene024283:CDS |
GTTCTATTCTCGTGCTGAAA+TGG | 0.396061 | 7.1:+21018409 | MS.gene024283:CDS |
ATTGAAACCTTCAAAAGCTT+CGG | 0.400201 | 7.1:-21016090 | None:intergenic |
GCCTACATTAACAACAAATC+AGG | 0.403074 | 7.1:+21020426 | MS.gene024283:CDS |
AAGCTTCCTGTGAGTGCCTC+TGG | 0.403935 | 7.1:+21021795 | MS.gene024283:CDS |
CTCAGGGCCACAGCCACAAT+TGG | 0.407383 | 7.1:-21022023 | None:intergenic |
GGAGGTTTGGAATGAGAAAA+TGG | 0.407704 | 7.1:+21016497 | MS.gene024283:CDS |
CGCTTGGCAGGTCGCTTGGA+AGG | 0.409156 | 7.1:-21017608 | None:intergenic |
TTTGCAGGTTGACCGCTATT+GGG | 0.418506 | 7.1:+21020342 | MS.gene024283:intron |
TTTCTTCTCAAGAGGGTTGA+AGG | 0.419212 | 7.1:+21020400 | MS.gene024283:CDS |
CTGTACCCTCACAAAAGAAT+TGG | 0.424940 | 7.1:+21018170 | MS.gene024283:CDS |
TTTCATAGCCACTGGTTGAA+TGG | 0.427271 | 7.1:+21018443 | MS.gene024283:CDS |
AACGTGAGCTGATGGAGGTT+TGG | 0.428185 | 7.1:+21016484 | MS.gene024283:CDS |
TTCAGATCAGGTCGCTTGGC+AGG | 0.440891 | 7.1:-21017620 | None:intergenic |
AAGGATGGGCTGTTAGATCC+TGG | 0.443096 | 7.1:+21022202 | MS.gene024283:CDS |
ACTCACAAACTCAACTTGCC+TGG | 0.445426 | 7.1:-21021133 | None:intergenic |
TTACAGGTTTATTTCACAAT+GGG | 0.447606 | 7.1:+21020909 | MS.gene024283:intron |
CAGGAGCTGACATATGACTA+TGG | 0.448312 | 7.1:+21023110 | MS.gene024283:intron |
ACAAAATGGGTTACCTGTAA+AGG | 0.456412 | 7.1:-21022694 | None:intergenic |
AGGCATGTATGAGGATGATC+TGG | 0.456593 | 7.1:+21018665 | MS.gene024283:CDS |
TTCACCTTAATCTTCACCTT+AGG | 0.458201 | 7.1:-21016117 | None:intergenic |
CTCACAAACTCAACTTGCCT+GGG | 0.462979 | 7.1:-21021132 | None:intergenic |
TACCAAATTTGTCGCTGGAA+TGG | 0.464473 | 7.1:-21021086 | None:intergenic |
TCAAATTAATGATCAAAAGT+TGG | 0.464564 | 7.1:+21018749 | MS.gene024283:CDS |
TTAACCACACTCTCCCTACT+AGG | 0.465703 | 7.1:-21016363 | None:intergenic |
TGTGGTTAAGGAGGTTGTTG+AGG | 0.466253 | 7.1:+21016377 | MS.gene024283:CDS |
TGTGAGTACACAGGAATACT+TGG | 0.466484 | 7.1:+21022252 | MS.gene024283:CDS |
ATTCCTGTGTACTCACAAAC+TGG | 0.467217 | 7.1:-21022246 | None:intergenic |
GTGTGAAGAGAAGTCCTAGT+AGG | 0.468290 | 7.1:+21016349 | MS.gene024283:CDS |
AAGAGGACTTAAATATCGTC+TGG | 0.469483 | 7.1:+21022066 | MS.gene024283:CDS |
GAAGGAAGAGGTTGTTGTCG+AGG | 0.469554 | 7.1:+21016422 | MS.gene024283:CDS |
TTGCAAACAATCAAGGGGCT+TGG | 0.470337 | 7.1:+21022333 | MS.gene024283:CDS |
CAATCAAGGGGCTTGGTGGA+AGG | 0.471334 | 7.1:+21022340 | MS.gene024283:CDS |
AAGGAAGAGGTTGTTGTCGA+GGG | 0.474727 | 7.1:+21016423 | MS.gene024283:CDS |
AAGCAATTGGCGTGCTATTG+TGG | 0.474880 | 7.1:+21023173 | MS.gene024283:CDS |
CGGCCAATCTTATTCCAAAA+CGG | 0.477129 | 7.1:+21018478 | MS.gene024283:CDS |
TGATGGGAAGATAAAGCAAT+TGG | 0.478575 | 7.1:+21023160 | MS.gene024283:CDS |
TGTTATTTCAGGCATGTATG+AGG | 0.478696 | 7.1:+21018656 | MS.gene024283:CDS |
CCCATCCTTTCTTTGCAGTA+CGG | 0.480931 | 7.1:-21022188 | None:intergenic |
AGGTCGCTTGGCAGGTCGCT+TGG | 0.482166 | 7.1:-21017612 | None:intergenic |
AGAAGACGTGGACAGTGTAT+TGG | 0.482919 | 7.1:+21022281 | MS.gene024283:CDS |
ATTGCGCTTCGCACATTCAC+AGG | 0.484361 | 7.1:-21021853 | None:intergenic |
AGGTTTCGCCGGTGAAGTCC+AGG | 0.486360 | 7.1:+21016322 | MS.gene024283:CDS |
GAAGGTTTCAATGAATCCTA+AGG | 0.487492 | 7.1:+21016101 | MS.gene024283:CDS |
AGATTGCTTGCAAACAATCA+AGG | 0.487602 | 7.1:+21022326 | MS.gene024283:CDS |
GCGTGCTATTGTGGAGCTAC+AGG | 0.488774 | 7.1:+21023182 | MS.gene024283:CDS |
TTGATTGAAGGCATAGAGGT+TGG | 0.491854 | 7.1:+21018380 | MS.gene024283:intron |
GTGGCCCTGAGTGTGTGAAT+AGG | 0.492031 | 7.1:+21022035 | MS.gene024283:CDS |
CAAACAATCAAGGGGCTTGG+TGG | 0.493442 | 7.1:+21022336 | MS.gene024283:CDS |
AGAGAAATCCGACGAGGTTG+AGG | 0.493999 | 7.1:+21016302 | MS.gene024283:CDS |
AATCAAGGGGCTTGGTGGAA+GGG | 0.497000 | 7.1:+21022341 | MS.gene024283:CDS |
CTATGCACTTGATAGTGTCT+TGG | 0.499400 | 7.1:+21023133 | MS.gene024283:CDS |
TGTACAGGAAGAAGAGGAGA+GGG | 0.501305 | 7.1:+21016997 | MS.gene024283:intron |
GGTAAAGTCTACACATATGA+TGG | 0.505484 | 7.1:+21019907 | MS.gene024283:CDS |
CAAATATTTGAAGTCTCTGA+AGG | 0.505529 | 7.1:+21021758 | MS.gene024283:CDS |
GTGAAGATTAAGGTGAAATA+CGG | 0.506723 | 7.1:+21016123 | MS.gene024283:CDS |
TTGAAGAGATTCAGCTTCGC+CGG | 0.509201 | 7.1:+21016256 | MS.gene024283:CDS |
TAGGGAGAGTGTGGTTAAGG+AGG | 0.509837 | 7.1:+21016368 | MS.gene024283:CDS |
TCAGGGCCACAGCCACAATT+GGG | 0.510052 | 7.1:-21022022 | None:intergenic |
ACCTGATTTGTTGTTAATGT+AGG | 0.511942 | 7.1:-21020427 | None:intergenic |
TCCGTACTGCAAAGAAAGGA+TGG | 0.513656 | 7.1:+21022187 | MS.gene024283:CDS |
AGAAACAACGGAGAAGAAGA+AGG | 0.513745 | 7.1:+21016404 | MS.gene024283:CDS |
GCGTTCAAAATGTGCCAGTA+AGG | 0.516205 | 7.1:+21019848 | MS.gene024283:CDS |
GCTTGGCAGGTCGCTTGGAA+GGG | 0.517670 | 7.1:-21017607 | None:intergenic |
CGTGCTGAAATGGTTGCAGT+TGG | 0.517795 | 7.1:+21018419 | MS.gene024283:CDS |
TGTGGTCCCAATTGTGGCTG+TGG | 0.518256 | 7.1:+21022016 | MS.gene024283:CDS |
TGACCGCTATTGGGCAGAGA+AGG | 0.518441 | 7.1:+21020351 | MS.gene024283:CDS |
CACATATGATGGCTTGTACA+AGG | 0.520190 | 7.1:+21019918 | MS.gene024283:CDS |
GATAGTGTCTTGGATTCTGA+TGG | 0.520727 | 7.1:+21023143 | MS.gene024283:CDS |
GCCATTGCATTTGCATCCAG+AGG | 0.521579 | 7.1:-21021811 | None:intergenic |
TTTGAATGTGGTCCCAATTG+TGG | 0.523304 | 7.1:+21022010 | MS.gene024283:CDS |
ACCGACAAAGAAGAAGAAAT+CGG | 0.525585 | 7.1:+21016449 | MS.gene024283:CDS |
CTCGAGCCAATCGCAAATCA+TGG | 0.526517 | 7.1:-21022642 | None:intergenic |
TGAGGATATCACTAACGGTC+AGG | 0.527473 | 7.1:+21021054 | MS.gene024283:CDS |
TATACAAGTTTCTTCTCAAG+AGG | 0.530168 | 7.1:+21020392 | MS.gene024283:CDS |
ATTGTGGAGCTACAGGCTGC+AGG | 0.531984 | 7.1:+21023189 | MS.gene024283:CDS |
GGCTTTCAGATCAGGTCGCT+TGG | 0.533756 | 7.1:-21017624 | None:intergenic |
GAGGGGTAATTTAGCACTCA+AGG | 0.533774 | 7.1:+21018773 | MS.gene024283:CDS |
TCCAGGGAAGAAGTCCCATA+AGG | 0.534829 | 7.1:+21017129 | MS.gene024283:CDS |
TCAGATGGTTGCGCAATCGT+TGG | 0.536360 | 7.1:+21016032 | None:intergenic |
CCTGCATCAATGCAAAACTC+TGG | 0.537698 | 7.1:-21022541 | None:intergenic |
TCTCTTGATTGAAGGCATAG+AGG | 0.537748 | 7.1:+21018376 | MS.gene024283:intron |
ACACGCTTCCTGGACTTCAC+CGG | 0.540558 | 7.1:-21016330 | None:intergenic |
ACAAATTAGGCTCACAGCAA+TGG | 0.544483 | 7.1:-21022594 | None:intergenic |
GGTCTACTGGAAATGTTGCT+AGG | 0.545278 | 7.1:+21022563 | MS.gene024283:CDS |
CACACACCATGATTTGCGAT+TGG | 0.545362 | 7.1:+21022636 | MS.gene024283:CDS |
CAGCTTCGCCGGAAAGCTGA+GGG | 0.548569 | 7.1:+21016267 | MS.gene024283:CDS |
AGGATGGGCTGTTAGATCCT+GGG | 0.549307 | 7.1:+21022203 | MS.gene024283:CDS |
CGCAGAGGAGATCGAGTTCG+AGG | 0.550863 | 7.1:+21016211 | MS.gene024283:CDS |
GATTGCTTGCAAACAATCAA+GGG | 0.551561 | 7.1:+21022327 | MS.gene024283:CDS |
TCATCTACCAAATTTGTCGC+TGG | 0.552559 | 7.1:-21021091 | None:intergenic |
TAATGATCAAAAGTTGGAGA+GGG | 0.554324 | 7.1:+21018755 | MS.gene024283:CDS |
TGATAAGAGCTCAACGGCGA+AGG | 0.555781 | 7.1:+21016554 | MS.gene024283:CDS |
TGATGAGAAACGTGAGCTGA+TGG | 0.558405 | 7.1:+21016476 | MS.gene024283:CDS |
GAAGTCCTATTCACACACTC+AGG | 0.559130 | 7.1:-21022040 | None:intergenic |
TGTGAAGAGAAGTCCTAGTA+GGG | 0.559219 | 7.1:+21016350 | MS.gene024283:CDS |
CAAGGTGGGCATAATCTGAC+TGG | 0.563101 | 7.1:+21018717 | MS.gene024283:CDS |
GAAGCTGAAAGATGAATCGA+AGG | 0.565258 | 7.1:+21016152 | MS.gene024283:CDS |
GCCACCATCTTTAGACACAT+AGG | 0.568695 | 7.1:-21021889 | None:intergenic |
ATTACAGGTTTATTTCACAA+TGG | 0.571455 | 7.1:+21020908 | MS.gene024283:intron |
GACCGCTATTGGGCAGAGAA+GGG | 0.572214 | 7.1:+21020352 | MS.gene024283:CDS |
CCACCATCTTTAGACACATA+GGG | 0.572431 | 7.1:-21021888 | None:intergenic |
ATGTACAGGAAGAAGAGGAG+AGG | 0.573665 | 7.1:+21016996 | MS.gene024283:intron |
CGACGAGGTTGAGGTTTCGC+CGG | 0.575414 | 7.1:+21016311 | MS.gene024283:CDS |
ACCGGAAGGTATAAAATCCC+AGG | 0.577194 | 7.1:-21022220 | None:intergenic |
ATGTGTCTAAAGATGGTGGC+AGG | 0.577214 | 7.1:+21021892 | MS.gene024283:CDS |
GATCTCCTCTGCGACGACAT+TGG | 0.578970 | 7.1:-21016201 | None:intergenic |
GCTTGATCTCCCAGTTGCTG+TGG | 0.579618 | 7.1:+21018629 | MS.gene024283:CDS |
CCGTACTGCAAAGAAAGGAT+GGG | 0.585335 | 7.1:+21022188 | MS.gene024283:CDS |
TTGGGATGTACAGGAAGAAG+AGG | 0.585512 | 7.1:+21016991 | MS.gene024283:intron |
ATACAAGTTTCTTCTCAAGA+GGG | 0.586458 | 7.1:+21020393 | MS.gene024283:CDS |
GTACTCACAAACTGGTGCAC+CGG | 0.586682 | 7.1:-21022238 | None:intergenic |
TTGCATCCAGAGGCACTCAC+AGG | 0.588608 | 7.1:-21021801 | None:intergenic |
GATTCAAGCTAAGCAGAAAG+AGG | 0.589427 | 7.1:+21016233 | MS.gene024283:CDS |
TTTCCCTATGTGTCTAAAGA+TGG | 0.591809 | 7.1:+21021885 | MS.gene024283:CDS |
CGTTCAAAATGTGCCAGTAA+GGG | 0.592551 | 7.1:+21019849 | MS.gene024283:CDS |
TCAGCTTCGCCGGAAAGCTG+AGG | 0.594733 | 7.1:+21016266 | MS.gene024283:CDS |
CAAGGGGCTTGGTGGAAGGG+AGG | 0.596017 | 7.1:+21022344 | MS.gene024283:CDS |
GCTGCGGAAACTGAAAATGC+TGG | 0.597698 | 7.1:+21016519 | MS.gene024283:CDS |
AACGGAGAAGAAGAAGGAAG+AGG | 0.598778 | 7.1:+21016410 | MS.gene024283:CDS |
TTAATGATCAAAAGTTGGAG+AGG | 0.598977 | 7.1:+21018754 | MS.gene024283:CDS |
AAGTCCTAGTAGGGAGAGTG+TGG | 0.599191 | 7.1:+21016359 | MS.gene024283:CDS |
GAATTTGAGAAGACAAGTGG+CGG | 0.600346 | 7.1:+21017037 | MS.gene024283:CDS |
TGATTTGCGATTGGCTCGAG+TGG | 0.602506 | 7.1:+21022645 | MS.gene024283:CDS |
ATCTGTGAGGATATCACTAA+CGG | 0.604455 | 7.1:+21021049 | MS.gene024283:CDS |
CCCTATGTGTCTAAAGATGG+TGG | 0.604829 | 7.1:+21021888 | MS.gene024283:CDS |
AGGAAGAGGTTGTTGTCGAG+GGG | 0.606375 | 7.1:+21016424 | MS.gene024283:CDS |
ATAGTGTCTTGGATTCTGAT+GGG | 0.606639 | 7.1:+21023144 | MS.gene024283:CDS |
GATATCACTAACGGTCAGGA+AGG | 0.610777 | 7.1:+21021058 | MS.gene024283:CDS |
CGTATTTCTGCTGTAGACTG+AGG | 0.611269 | 7.1:-21020939 | None:intergenic |
AAGATTAAGGTGAAATACGG+TGG | 0.617774 | 7.1:+21016126 | MS.gene024283:CDS |
GTGCCAGTAAGGGTGATTCG+AGG | 0.619482 | 7.1:+21019859 | MS.gene024283:CDS |
AGATGAATCGAAGGATGCGA+CGG | 0.619609 | 7.1:+21016161 | MS.gene024283:CDS |
GCTTCGCCGGAAAGCTGAGG+GGG | 0.621254 | 7.1:+21016269 | MS.gene024283:CDS |
AGTACACAGGAATACTTGGT+AGG | 0.625398 | 7.1:+21022256 | MS.gene024283:CDS |
GCCTCTGGATGCAAATGCAA+TGG | 0.625557 | 7.1:+21021810 | MS.gene024283:CDS |
AAAATGGGTTACCTGTAAAG+GGG | 0.627551 | 7.1:-21022692 | None:intergenic |
AATGATCAAAAGTTGGAGAG+GGG | 0.628799 | 7.1:+21018756 | MS.gene024283:CDS |
ATCCCTTCTCTGCCCAATAG+CGG | 0.629617 | 7.1:-21020354 | None:intergenic |
TCACAAACTCAACTTGCCTG+GGG | 0.631220 | 7.1:-21021131 | None:intergenic |
TTGGAATGAGAAAATGGCTG+CGG | 0.631243 | 7.1:+21016503 | MS.gene024283:CDS |
AATCAATGCCATTCAACCAG+TGG | 0.631469 | 7.1:-21018451 | None:intergenic |
TAACAATGGCCACAGCAACT+GGG | 0.636805 | 7.1:-21018638 | None:intergenic |
ATACATGCCTGAAATAACAA+TGG | 0.637494 | 7.1:-21018652 | None:intergenic |
AATTTGAGAAGACAAGTGGC+GGG | 0.645870 | 7.1:+21017038 | MS.gene024283:CDS |
AACGCAAGTAGCAGTTACAC+TGG | 0.648305 | 7.1:+21019886 | MS.gene024283:CDS |
CGGCGAAACCTCAACCTCGT+CGG | 0.649190 | 7.1:-21016310 | None:intergenic |
TTTGCTTAGGTTGATCTGTG+AGG | 0.649764 | 7.1:+21021036 | MS.gene024283:intron |
GATGTTGTGTACACTGGTCA+AGG | 0.651903 | 7.1:+21018699 | MS.gene024283:CDS |
TCACAAACTGGTGCACCGGA+AGG | 0.652054 | 7.1:-21022234 | None:intergenic |
GAAGGATGCGACGGTGACGA+CGG | 0.653424 | 7.1:+21016170 | MS.gene024283:CDS |
CACAAACTCAACTTGCCTGG+GGG | 0.654263 | 7.1:-21021130 | None:intergenic |
ATTGCTTGCAAACAATCAAG+GGG | 0.655499 | 7.1:+21022328 | MS.gene024283:CDS |
AACAACACAATCATTCGCAA+CGG | 0.656487 | 7.1:-21016067 | None:intergenic |
CAGTCTACAGCAGAAATACG+AGG | 0.656834 | 7.1:+21020942 | MS.gene024283:CDS |
TGTGAATGTGCGAAGCGCAA+TGG | 0.657566 | 7.1:+21021855 | MS.gene024283:CDS |
GCTGAGGATGTTGTGTACAC+TGG | 0.657676 | 7.1:+21018693 | MS.gene024283:CDS |
TTGTGTACACTGGTCAAGGT+GGG | 0.660354 | 7.1:+21018703 | MS.gene024283:CDS |
AAGTCCTATTCACACACTCA+GGG | 0.661425 | 7.1:-21022039 | None:intergenic |
GTTGTGTACACTGGTCAAGG+TGG | 0.663096 | 7.1:+21018702 | MS.gene024283:CDS |
GGATGCGACGGTGACGACGG+AGG | 0.664620 | 7.1:+21016173 | MS.gene024283:CDS |
GCTGAATTTGAGAAGACAAG+TGG | 0.671018 | 7.1:+21017034 | MS.gene024283:CDS |
ACTTGGTAGGACAGAAGACG+TGG | 0.672988 | 7.1:+21022269 | MS.gene024283:CDS |
AAATGGGTTACCTGTAAAGG+GGG | 0.674129 | 7.1:-21022691 | None:intergenic |
AAAGACGTTGTGTTTGAATG+TGG | 0.675624 | 7.1:+21021998 | MS.gene024283:CDS |
AGGACTTAAATATCGTCTGG+AGG | 0.676016 | 7.1:+21022069 | MS.gene024283:CDS |
TGACACCAATGTCGTCGCAG+AGG | 0.677701 | 7.1:+21016196 | MS.gene024283:CDS |
GCGGAAACTGAAAATGCTGG+TGG | 0.695941 | 7.1:+21016522 | MS.gene024283:CDS |
ATTGAGTGATAAGAGCTCAA+CGG | 0.696173 | 7.1:+21016548 | MS.gene024283:CDS |
GCACCAGTTTGTGAGTACAC+AGG | 0.696684 | 7.1:+21022243 | MS.gene024283:CDS |
GTGAATAGGACTTCTCAAAG+AGG | 0.697957 | 7.1:+21022049 | MS.gene024283:CDS |
TGATCTGAAAGCCATAACCA+AGG | 0.704164 | 7.1:+21017634 | MS.gene024283:CDS |
GGATGATCTGGATAATGCTG+AGG | 0.704820 | 7.1:+21018677 | MS.gene024283:CDS |
AGCTTCGCCGGAAAGCTGAG+GGG | 0.705302 | 7.1:+21016268 | MS.gene024283:CDS |
TGTTGAGGAGAAAGAAACAA+CGG | 0.711458 | 7.1:+21016392 | MS.gene024283:CDS |
AGTCTACAGCAGAAATACGA+GGG | 0.715033 | 7.1:+21020943 | MS.gene024283:CDS |
TGAGAAACGTGAGCTGATGG+AGG | 0.729307 | 7.1:+21016479 | MS.gene024283:CDS |
AGCTGAAGAGAAATCCGACG+AGG | 0.742452 | 7.1:+21016296 | MS.gene024283:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 21016036 | 21023226 | 21016036 | ID=MS.gene024283 |
chr7.1 | mRNA | 21016036 | 21023226 | 21016036 | ID=MS.gene024283.t1;Parent=MS.gene024283 |
chr7.1 | exon | 21016036 | 21016626 | 21016036 | ID=MS.gene024283.t1.exon1;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21016036 | 21016626 | 21016036 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21017004 | 21017150 | 21017004 | ID=MS.gene024283.t1.exon2;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21017004 | 21017150 | 21017004 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21017578 | 21017655 | 21017578 | ID=MS.gene024283.t1.exon3;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21017578 | 21017655 | 21017578 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21018149 | 21018203 | 21018149 | ID=MS.gene024283.t1.exon4;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21018149 | 21018203 | 21018149 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21018390 | 21018499 | 21018390 | ID=MS.gene024283.t1.exon5;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21018390 | 21018499 | 21018390 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21018624 | 21018794 | 21018624 | ID=MS.gene024283.t1.exon6;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21018624 | 21018794 | 21018624 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21019841 | 21019939 | 21019841 | ID=MS.gene024283.t1.exon7;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21019841 | 21019939 | 21019841 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21020349 | 21020447 | 21020349 | ID=MS.gene024283.t1.exon8;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21020349 | 21020447 | 21020349 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21020915 | 21020964 | 21020915 | ID=MS.gene024283.t1.exon9;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21020915 | 21020964 | 21020915 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21021045 | 21021145 | 21021045 | ID=MS.gene024283.t1.exon10;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21021045 | 21021145 | 21021045 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21021754 | 21021913 | 21021754 | ID=MS.gene024283.t1.exon11;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21021754 | 21021913 | 21021754 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21021985 | 21022090 | 21021985 | ID=MS.gene024283.t1.exon12;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21021985 | 21022090 | 21021985 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21022183 | 21022365 | 21022183 | ID=MS.gene024283.t1.exon13;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21022183 | 21022365 | 21022183 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21022469 | 21022702 | 21022469 | ID=MS.gene024283.t1.exon14;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21022469 | 21022702 | 21022469 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
chr7.1 | exon | 21023113 | 21023226 | 21023113 | ID=MS.gene024283.t1.exon15;Parent=MS.gene024283.t1 |
chr7.1 | CDS | 21023113 | 21023226 | 21023113 | ID=cds.MS.gene024283.t1;Parent=MS.gene024283.t1 |
Gene Sequence |
Protein sequence |