AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034064

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034064.t1 MTR_4g010830 84.471 1011 116 5 1 1001 1 980 0.0 1675
MS.gene034064.t1 MTR_5g013420 73.099 1052 202 12 13 1001 56 1089 0.0 1481
MS.gene034064.t1 MTR_5g013420 73.004 1052 203 12 13 1001 56 1089 0.0 1477
MS.gene034064.t1 MTR_4g010550 85.455 495 36 6 512 1001 1 464 0.0 823
MS.gene034064.t1 MTR_7g445710 42.322 534 220 11 489 1001 77 543 1.50e-121 382
MS.gene034064.t1 MTR_8g042750 40.797 527 282 12 494 998 167 685 4.20e-120 383
MS.gene034064.t1 MTR_3g011440 40.183 545 294 15 480 1000 127 663 1.94e-118 378
MS.gene034064.t1 MTR_7g084090 40.891 516 271 12 516 1001 246 757 9.80e-117 376
MS.gene034064.t1 MTR_7g088370 40.875 526 270 18 493 1000 202 704 2.88e-116 374
MS.gene034064.t1 MTR_6g061270 41.188 522 264 13 516 1001 180 694 5.01e-115 370
MS.gene034064.t1 MTR_7g450730 41.255 526 214 10 483 1001 68 505 4.10e-114 361
MS.gene034064.t1 MTR_8g070070 42.733 461 240 12 530 970 299 755 7.77e-114 369
MS.gene034064.t1 MTR_8g070075 41.649 461 249 9 528 970 290 748 1.15e-112 365
MS.gene034064.t1 MTR_6g061200 41.010 495 248 12 527 1001 195 665 4.92e-108 350
MS.gene034064.t1 MTR_7g445530 41.352 503 207 11 490 971 78 513 2.47e-107 343
MS.gene034064.t1 MTR_8g071030 41.830 459 245 10 531 970 280 735 1.24e-106 349
MS.gene034064.t1 MTR_1g035420 37.522 557 300 14 454 975 106 649 1.59e-106 346
MS.gene034064.t1 MTR_1g048950 40.000 535 263 11 492 1001 32 533 1.90e-103 335
MS.gene034064.t1 MTR_6g044690 38.330 467 251 13 528 970 109 562 1.90e-91 303
MS.gene034064.t1 MTR_0376s0030 35.673 513 280 15 494 970 62 560 2.03e-86 290
MS.gene034064.t1 MTR_1g035400 36.523 512 284 16 494 975 68 568 5.31e-84 283
MS.gene034064.t1 MTR_7g084090 39.896 386 209 10 516 880 246 629 3.32e-76 264
MS.gene034064.t1 MTR_6g043960 35.181 469 238 14 530 970 50 480 2.38e-75 256
MS.gene034064.t1 MTR_7g052480 41.509 318 166 7 698 1001 245 556 8.82e-68 238
MS.gene034064.t1 MTR_2g054460 32.604 503 264 11 494 970 9 462 1.34e-67 234
MS.gene034064.t1 MTR_5g018850 35.494 324 144 10 719 1001 1208 1507 2.68e-44 175
MS.gene034064.t1 MTR_7g445600 51.370 146 34 1 826 971 248 356 4.30e-42 158
MS.gene034064.t1 MTR_7g445600 37.278 169 89 3 490 658 74 225 2.34e-24 106
MS.gene034064.t1 MTR_8g078490 39.815 216 111 4 787 1001 1056 1253 1.29e-41 166
MS.gene034064.t1 MTR_4g132610 39.545 220 104 6 788 1001 851 1047 3.80e-38 155
MS.gene034064.t1 MTR_8g078505 37.963 216 104 6 786 996 343 533 1.97e-35 142
MS.gene034064.t1 MTR_1g069570 29.730 333 158 12 721 996 428 741 6.82e-30 127
MS.gene034064.t1 MTR_1g080340 29.080 337 162 10 721 999 267 584 3.60e-29 124
MS.gene034064.t1 MTR_7g098390 25.872 344 167 9 715 996 380 697 3.91e-25 112
MS.gene034064.t1 MTR_7g445810 36.364 198 97 6 490 679 91 267 4.31e-25 106
MS.gene034064.t1 MTR_1g069570 28.302 265 118 10 721 929 428 676 1.37e-20 97.8
MS.gene034064.t1 MTR_1g098370 32.821 195 93 8 806 997 75 234 5.18e-19 92.0
MS.gene034064.t1 MTR_0071s0100 34.021 194 92 7 807 1000 191 348 5.89e-19 90.5
MS.gene034064.t1 MTR_1g098000 32.308 195 94 8 806 997 72 231 1.30e-18 90.9
MS.gene034064.t1 MTR_3g088625 33.163 196 87 6 811 1000 1307 1464 3.81e-18 90.9
MS.gene034064.t1 MTR_3g088625 33.163 196 87 6 811 1000 1201 1358 3.93e-18 90.9
MS.gene034064.t1 MTR_6g059310 30.303 198 104 6 803 1000 87 250 1.41e-17 85.9
MS.gene034064.t1 MTR_6g059310 30.303 198 104 6 803 1000 87 250 1.77e-17 85.5
MS.gene034064.t1 MTR_5g098680 34.615 156 85 4 556 700 267 416 2.61e-16 84.3
MS.gene034064.t1 MTR_8g102580 33.974 156 86 4 556 700 261 410 1.53e-15 81.6
MS.gene034064.t1 MTR_6g027690 29.317 249 116 9 766 1000 217 419 2.35e-15 80.1
MS.gene034064.t1 MTR_8g027725 33.548 155 65 5 827 975 791 913 1.27e-12 72.8
MS.gene034064.t1 MTR_8g027725 33.548 155 65 5 827 975 806 928 1.29e-12 72.8
MS.gene034064.t1 MTR_1g064770 45.312 64 34 1 800 862 27 90 1.75e-12 64.7
MS.gene034064.t1 MTR_7g117355 33.548 155 65 5 827 975 821 943 2.39e-12 71.6
MS.gene034064.t1 MTR_1g012910 28.070 171 95 5 830 1000 528 670 5.79e-12 70.1
MS.gene034064.t1 MTR_1g012910 28.070 171 95 5 830 1000 365 507 1.13e-11 68.9
MS.gene034064.t1 MTR_6g044000 48.980 49 25 0 922 970 119 167 3.55e-11 63.5
MS.gene034064.t1 MTR_2g036060 25.581 172 80 4 829 993 1058 1188 4.44e-11 67.8
MS.gene034064.t1 MTR_2g036060 25.581 172 80 4 829 993 1033 1163 4.69e-11 67.8
MS.gene034064.t1 MTR_1g008230 32.867 143 58 4 839 975 903 1013 8.05e-11 67.0
MS.gene034064.t1 MTR_1g008230 32.867 143 58 4 839 975 625 735 8.58e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034064.t1 AT2G22740 61.950 523 182 8 494 1001 270 790 0.0 642
MS.gene034064.t1 AT2G22740 61.950 523 182 8 494 1001 270 790 0.0 642
MS.gene034064.t1 AT2G35160 59.496 516 175 5 493 1001 306 794 0.0 633
MS.gene034064.t1 AT2G35160 59.496 516 175 5 493 1001 306 794 0.0 633
MS.gene034064.t1 AT2G35160 59.496 516 175 5 493 1001 306 794 0.0 633
MS.gene034064.t1 AT2G35160 59.496 516 175 5 493 1001 270 758 0.0 633
MS.gene034064.t1 AT2G35160 59.496 516 175 5 493 1001 306 794 0.0 633
MS.gene034064.t1 AT5G04940 41.045 536 286 15 483 1000 146 669 4.11e-120 382
MS.gene034064.t1 AT5G04940 41.045 536 286 15 483 1000 146 669 4.11e-120 382
MS.gene034064.t1 AT5G13960 40.187 535 277 14 496 1001 104 624 2.40e-114 366
MS.gene034064.t1 AT5G13960 42.412 481 245 12 550 1001 13 490 8.39e-113 357
MS.gene034064.t1 AT1G73100 39.777 538 288 14 482 1000 148 668 2.88e-111 359
MS.gene034064.t1 AT4G13460 38.039 510 291 11 486 975 137 641 1.02e-103 338
MS.gene034064.t1 AT4G13460 38.039 510 291 11 486 975 137 641 1.02e-103 338
MS.gene034064.t1 AT2G33290 35.756 509 307 8 479 971 134 638 4.26e-98 323
MS.gene034064.t1 AT2G33290 35.756 509 307 8 479 971 134 638 4.26e-98 323
MS.gene034064.t1 AT2G33290 35.756 509 307 8 479 971 134 638 4.26e-98 323
MS.gene034064.t1 AT2G33290 35.756 509 307 8 479 971 134 638 4.26e-98 323
MS.gene034064.t1 AT2G24740 35.359 543 285 17 482 998 250 752 2.20e-86 294
MS.gene034064.t1 AT1G17770 36.786 473 270 12 551 1000 226 692 2.60e-85 290
MS.gene034064.t1 AT5G47150 46.977 215 111 3 490 702 114 327 8.15e-51 182
MS.gene034064.t1 AT5G47160 42.007 269 148 5 430 695 144 407 1.37e-46 173
MS.gene034064.t1 AT5G47160 42.007 269 148 5 430 695 144 407 1.37e-46 173
MS.gene034064.t1 AT5G47160 42.007 269 148 5 430 695 144 407 1.37e-46 173
MS.gene034064.t1 AT2G23740 34.579 321 158 11 711 1000 1075 1374 1.56e-38 157
MS.gene034064.t1 AT2G23740 34.579 321 158 11 711 1000 1082 1381 1.92e-38 156
MS.gene034064.t1 AT2G23740 34.579 321 158 11 711 1000 1082 1381 1.92e-38 156
MS.gene034064.t1 AT2G23740 34.579 321 158 11 711 1000 1082 1381 1.92e-38 156
MS.gene034064.t1 AT3G04380 27.945 365 181 14 692 999 121 460 4.00e-29 123
MS.gene034064.t1 AT3G04380 27.671 365 182 14 692 999 94 433 4.67e-29 122
MS.gene034064.t1 AT3G04380 27.945 365 181 14 692 999 105 444 4.90e-29 122
MS.gene034064.t1 AT3G04380 27.671 365 182 14 692 999 94 433 7.66e-29 121
MS.gene034064.t1 AT3G04380 27.671 365 182 14 692 999 121 460 7.81e-29 122
MS.gene034064.t1 AT3G04380 27.671 365 182 14 692 999 78 417 1.10e-28 121
MS.gene034064.t1 AT2G23740 34.800 250 115 9 711 929 1082 1314 3.48e-28 123
MS.gene034064.t1 AT2G23740 34.800 250 115 9 711 929 1082 1314 3.48e-28 123
MS.gene034064.t1 AT2G05900 36.111 216 122 9 569 772 1 212 1.62e-27 114
MS.gene034064.t1 AT2G05900 41.463 82 40 2 917 998 236 309 2.18e-11 66.6
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 373 684 1.05e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 373 684 1.05e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 373 684 1.05e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 373 684 1.05e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 396 707 1.30e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 396 707 1.30e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 416 727 1.34e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 416 727 1.34e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 393 704 1.45e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 393 704 1.45e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 393 704 1.45e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 393 704 1.45e-25 114
MS.gene034064.t1 AT1G04050 27.083 336 167 11 721 999 407 721 1.80e-25 114
MS.gene034064.t1 AT1G04050 27.083 336 167 11 721 999 407 721 1.80e-25 114
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 304 615 2.34e-25 112
MS.gene034064.t1 AT1G04050 33.166 199 111 5 804 999 438 617 2.89e-25 112
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 324 635 3.15e-25 112
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 324 635 3.15e-25 112
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 324 635 3.15e-25 112
MS.gene034064.t1 AT5G43990 28.144 334 163 13 721 999 324 635 3.15e-25 112
MS.gene034064.t1 AT3G03750 33.816 207 105 6 803 1000 166 349 5.56e-21 96.3
MS.gene034064.t1 AT1G76710 33.333 198 94 7 806 1000 66 228 1.19e-19 94.0
MS.gene034064.t1 AT1G76710 33.333 198 94 7 806 1000 66 228 1.19e-19 94.0
MS.gene034064.t1 AT1G76710 33.333 198 94 7 806 1000 66 228 1.59e-19 94.0
MS.gene034064.t1 AT1G76710 33.333 198 94 7 806 1000 66 228 1.69e-19 93.6
MS.gene034064.t1 AT4G30860 30.034 293 136 13 717 1000 232 464 9.71e-19 91.3
MS.gene034064.t1 AT1G77300 30.526 190 98 7 813 1000 1009 1166 3.27e-17 87.8
MS.gene034064.t1 AT1G77300 30.526 190 98 7 813 1000 1009 1166 4.20e-17 87.8
MS.gene034064.t1 AT1G57820 33.758 157 86 5 556 700 277 427 2.56e-16 84.3
MS.gene034064.t1 AT1G57820 33.758 157 86 5 556 700 277 427 2.56e-16 84.3
MS.gene034064.t1 AT1G57820 33.117 154 88 5 556 700 277 424 1.72e-15 81.6
MS.gene034064.t1 AT3G59960 30.636 173 84 6 829 1000 112 249 3.06e-14 75.1
MS.gene034064.t1 AT3G59960 30.636 173 84 6 829 1000 112 249 3.06e-14 75.1
MS.gene034064.t1 AT3G59960 30.636 173 84 6 829 1000 112 249 3.06e-14 75.1
MS.gene034064.t1 AT3G59960 30.636 173 84 6 829 1000 112 249 8.78e-14 74.3
MS.gene034064.t1 AT4G08590 36.641 131 65 4 556 679 237 356 1.24e-13 75.1
MS.gene034064.t1 AT2G44150 29.651 172 87 6 829 1000 117 254 2.23e-13 73.6
MS.gene034064.t1 AT3G61740 34.615 156 63 6 827 975 838 961 7.17e-13 73.6
MS.gene034064.t1 AT3G61740 34.615 156 63 6 827 975 874 997 9.56e-13 73.2
MS.gene034064.t1 AT4G08590 35.878 131 67 4 556 679 237 357 1.43e-12 71.2
MS.gene034064.t1 AT4G08590 35.878 131 67 4 556 679 237 357 1.65e-12 70.9
MS.gene034064.t1 AT4G08590 35.878 131 67 4 556 679 237 357 1.65e-12 70.9
MS.gene034064.t1 AT4G08590 35.878 131 67 4 556 679 237 357 1.97e-12 70.9
MS.gene034064.t1 AT4G27910 31.707 164 69 6 839 996 896 1022 6.34e-12 70.5
MS.gene034064.t1 AT5G53430 31.707 164 69 6 839 996 912 1038 4.04e-11 67.8
MS.gene034064.t1 AT1G02580 28.125 224 126 6 766 987 485 675 8.08e-11 66.6

Find 216 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGCTCGAACTATGTGATTT+TGG 0.106914 4.4:-88663566 None:intergenic
TCCTGAAGGGATGGAATTTA+AGG 0.160993 4.4:-88664698 None:intergenic
CGAAGACGATGTGCCTATTT+TGG 0.176590 4.4:+88662581 MS.gene034064:CDS
AGAATAGAGCTTAATATAAT+TGG 0.247368 4.4:+88663863 MS.gene034064:CDS
TGGCCTTCATCGCCAGATTC+AGG 0.250113 4.4:+88663883 MS.gene034064:CDS
TCAAGTGGATGGGGATAATT+TGG 0.268751 4.4:+88662380 MS.gene034064:CDS
ATATCCCCATTATGATTAAA+TGG 0.280457 4.4:-88664535 None:intergenic
TTGAGTCAGAATCGGGAAAA+AGG 0.281440 4.4:-88664852 None:intergenic
GTTGAAGGGCACTTGCATTT+AGG 0.290171 4.4:-88664592 None:intergenic
TGCAACTAGTATTGTTTCTT+CGG 0.298661 4.4:+88663943 MS.gene034064:CDS
AAAGGTGTACTGAATCATTC+TGG 0.301672 4.4:+88663425 MS.gene034064:CDS
GAGATTCCATTTAATCATAA+TGG 0.305009 4.4:+88664529 MS.gene034064:CDS
AGATTCCATTTAATCATAAT+GGG 0.307894 4.4:+88664530 MS.gene034064:CDS
CAATTTCTTCACTTCCTTCA+AGG 0.309539 4.4:-88664275 None:intergenic
TGAAGACTGTACCTTGAAAA+AGG 0.316856 4.4:+88662467 MS.gene034064:CDS
CATTCTGAGCATAAAGATTA+GGG 0.320807 4.4:-88664963 None:intergenic
GCAACTAGTATTGTTTCTTC+GGG 0.325203 4.4:+88663944 MS.gene034064:CDS
AAAGGATGTAATTGTACTAA+TGG 0.326952 4.4:+88664460 MS.gene034064:CDS
TTAGTACAATTACATCCTTT+TGG 0.326965 4.4:-88664457 None:intergenic
ACGTCGAAAGTCTCCAAAAT+AGG 0.328102 4.4:-88662594 None:intergenic
GTACACAACAACATTTCTTA+TGG 0.328564 4.4:-88664492 None:intergenic
GATAAGAGTGGCAAAGATTC+AGG 0.330173 4.4:+88662228 MS.gene034064:CDS
GGAACCACCAATATTGATAT+TGG 0.341978 4.4:-88662856 None:intergenic
TGAAGGAGGCTTTAACTAAA+AGG 0.341984 4.4:+88662889 MS.gene034064:CDS
AAACGATGAACCTGCAAAAC+TGG 0.342001 4.4:+88662698 MS.gene034064:CDS
GAGTCATGTTGGCAGGATAT+AGG 0.343797 4.4:+88664190 MS.gene034064:CDS
TGAGGTTAACATAAATTCTA+AGG 0.349922 4.4:+88663142 MS.gene034064:CDS
AATATCTTGGGATCTGTTCC+AGG 0.356395 4.4:+88663812 MS.gene034064:CDS
TCCTTAAATTCCATCCCTTC+AGG 0.359885 4.4:+88664697 MS.gene034064:CDS
ATACGATGCCTTTGATATAT+AGG 0.362188 4.4:-88662787 None:intergenic
AATCTATACCACCCTGAATC+TGG 0.363176 4.4:-88663895 None:intergenic
GGGACAAGATTGCAACATTC+AGG 0.367368 4.4:-88664433 None:intergenic
AAAGATTAGGGGAGCAACTA+TGG 0.371994 4.4:-88664951 None:intergenic
TACACCCCATCCCATTGAAT+TGG 0.382244 4.4:-88664671 None:intergenic
TCGTTGTCCAATATCAATAT+TGG 0.394388 4.4:+88662849 MS.gene034064:CDS
TTCTATGAAAAGCTTGGAAC+AGG 0.395291 4.4:-88663673 None:intergenic
ATTGGTTGGCATGGAAACTA+TGG 0.396042 4.4:+88662428 MS.gene034064:CDS
ACATTCTGAGCATAAAGATT+AGG 0.401083 4.4:-88664964 None:intergenic
GGACCACACTCATAGACTAT+AGG 0.406516 4.4:-88664571 None:intergenic
TTGGTTTGGAAGATGGAAAA+GGG 0.407566 4.4:+88662156 None:intergenic
TCAACCAGAGCTTGCCTTGA+AGG 0.411478 4.4:+88664261 MS.gene034064:CDS
ACTTCTTTCATATTTGACTT+TGG 0.416957 4.4:-88663722 None:intergenic
ACTTCCTTCAAGGCAAGCTC+TGG 0.417747 4.4:-88664265 None:intergenic
ACTATCGATGCAGCTCAGTT+TGG 0.420693 4.4:+88664907 MS.gene034064:CDS
TCGGTTATGTATTTAAATGT+AGG 0.420707 4.4:-88664400 None:intergenic
TGTGGTTCTGTGGAATGTAC+TGG 0.421622 4.4:+88665138 MS.gene034064:CDS
AGTCATGTTGGCAGGATATA+GGG 0.423970 4.4:+88664191 MS.gene034064:CDS
CGGTTATGTATTTAAATGTA+GGG 0.424018 4.4:-88664399 None:intergenic
CACCCTGAATCTGGCGATGA+AGG 0.425090 4.4:-88663886 None:intergenic
ACTTGAACTTGAGTCAGAAT+CGG 0.427711 4.4:-88664860 None:intergenic
TGGTGAGGTTCTTGAAGAAA+AGG 0.432808 4.4:+88664741 MS.gene034064:CDS
TAATGAAGGGGAGAATATCT+TGG 0.437477 4.4:+88663799 MS.gene034064:CDS
TAAAACCAATTCAATGGGAT+GGG 0.437648 4.4:+88664666 MS.gene034064:CDS
GAAAGTAGTTCAAGGTTTGA+TGG 0.438952 4.4:+88663232 MS.gene034064:CDS
TCAAAGAAGAAAGCTCCTTT+CGG 0.441008 4.4:-88662998 None:intergenic
AAATCTTTCTATGAAAAGCT+TGG 0.441334 4.4:-88663679 None:intergenic
GAAAAGATACTCATCATTAC+CGG 0.451653 4.4:-88664779 None:intergenic
GACATAGCTGCCTCGCCAGC+TGG 0.452005 4.4:-88662810 None:intergenic
CATAACAGAGTTAGCCAACT+TGG 0.452523 4.4:+88664619 MS.gene034064:CDS
TTGATAATGTCCAGCTGGAC+AGG 0.452841 4.4:+88663381 MS.gene034064:CDS
CTTGAACTTGAGTCAGAATC+GGG 0.454697 4.4:-88664859 None:intergenic
ACGGAACGAAAAGGAAAGAA+AGG 0.455459 4.4:+88663349 MS.gene034064:CDS
CAGAAGATCAAAAGCTTGAA+AGG 0.461492 4.4:+88664050 MS.gene034064:CDS
GTTTAGCTTGCGAAGAATCC+CGG 0.462680 4.4:+88664237 MS.gene034064:CDS
TTTGGTTTGGAAGATGGAAA+AGG 0.463760 4.4:+88662155 None:intergenic
TGAACCTGCAAAAGTGGAAT+TGG 0.464663 4.4:+88662410 MS.gene034064:CDS
GTAGGTTTGATGTCTAAATC+AGG 0.465650 4.4:+88663326 MS.gene034064:CDS
GCACTCATCCTGACTGAGAC+GGG 0.469960 4.4:-88662976 None:intergenic
GGCCTTCATCGCCAGATTCA+GGG 0.471401 4.4:+88663884 MS.gene034064:CDS
TAACATAAATTCTAAGGAAG+TGG 0.472992 4.4:+88663148 MS.gene034064:CDS
CTCTGTTATGGCAGGTTGAA+GGG 0.475588 4.4:-88664606 None:intergenic
TTAAAACCAATTCAATGGGA+TGG 0.477591 4.4:+88664665 MS.gene034064:CDS
CAAATATGAAAGAAGTAAAG+AGG 0.479183 4.4:+88663729 MS.gene034064:CDS
GTTGAATATTTATGCCAAGT+TGG 0.479273 4.4:-88664633 None:intergenic
AGAAAGATATATGTTTATGA+TGG 0.479440 4.4:+88664154 MS.gene034064:CDS
TGTAGTTGAGTCATGTTGGC+AGG 0.480080 4.4:+88664183 MS.gene034064:CDS
GAATTCTGTTAGAGTGATAC+GGG 0.480221 4.4:+88664108 MS.gene034064:CDS
GTTGCATCCGTTTCTGCTGA+TGG 0.482158 4.4:+88662192 MS.gene034064:CDS
ACTCTGTTATGGCAGGTTGA+AGG 0.482983 4.4:-88664607 None:intergenic
AGTAGTTCCAAGGTCTCATC+AGG 0.483311 4.4:+88663206 MS.gene034064:CDS
TATAGGGCCACGTGGGAAGC+TGG 0.486372 4.4:+88664207 MS.gene034064:CDS
TTTATGATCATCAAGACAGC+AGG 0.487008 4.4:+88664989 MS.gene034064:CDS
AACAAGTGACTGTACTTTGA+AGG 0.487630 4.4:+88662335 MS.gene034064:CDS
AATATCAATATTGGTGGTTC+CGG 0.489476 4.4:+88662858 MS.gene034064:CDS
TCAAATGGATGAGTCTACTT+TGG 0.490675 4.4:+88662674 MS.gene034064:CDS
AGAATTCTGTTAGAGTGATA+CGG 0.492353 4.4:+88664107 MS.gene034064:CDS
CAATGCTCCCCGTCTCAGTC+AGG 0.493023 4.4:+88662968 MS.gene034064:CDS
CAAGTTGGCTAACTCTGTTA+TGG 0.493210 4.4:-88664618 None:intergenic
TGCAGCTCAGTTTGGTAATG+TGG 0.495854 4.4:+88664915 MS.gene034064:CDS
AGAAGATCAAAAGCTTGAAA+GGG 0.499298 4.4:+88664051 MS.gene034064:CDS
AATGAAGGGGAGAATATCTT+GGG 0.502787 4.4:+88663800 MS.gene034064:CDS
AGTTCAAGGTTTGATGGCAG+TGG 0.503325 4.4:+88663238 MS.gene034064:CDS
TCTGTTCCAGGGGTTGAAGT+TGG 0.503371 4.4:+88663824 MS.gene034064:CDS
TGCAATCTTGTCCCTCCAAA+AGG 0.504802 4.4:+88664442 MS.gene034064:CDS
AAGGGAGCTGTGTTAATGAA+GGG 0.505095 4.4:+88663786 MS.gene034064:CDS
GAAAATTGATAATGTCCAGC+TGG 0.508457 4.4:+88663376 MS.gene034064:CDS
AGTGATTTCATCTCATCAAA+TGG 0.508635 4.4:+88662659 MS.gene034064:CDS
ACTCGTACCATCAGCAGAAA+CGG 0.511526 4.4:-88662199 None:intergenic
TGTACTGGTAGGTTGTATTG+AGG 0.511536 4.4:+88665153 MS.gene034064:CDS
ACCTGCAAAACTGGCATTGG+CGG 0.513521 4.4:+88662707 MS.gene034064:CDS
AGTAGTTCCAAGGTCTCATC+GGG 0.515055 4.4:+88663296 MS.gene034064:CDS
AAGGTGTACTGAATCATTCT+GGG 0.515488 4.4:+88663426 MS.gene034064:CDS
GCAGCTCAGTTTGGTAATGT+GGG 0.517933 4.4:+88664916 MS.gene034064:CDS
TTTCCTGCCCGATGAGACCT+TGG 0.518275 4.4:-88663303 None:intergenic
TGGTTCCGGTGCTTGTATGA+AGG 0.518765 4.4:+88662872 MS.gene034064:CDS
AAGGCAAGCTCTGGTTGACC+CGG 0.519854 4.4:-88664256 None:intergenic
AACAACAATAATCTTTGTGA+TGG 0.520060 4.4:+88664820 MS.gene034064:CDS
GTCTTATCTGATCAAGTGGA+TGG 0.522802 4.4:+88662369 MS.gene034064:CDS
GCATTGCCTCCACATAAACT+TGG 0.526839 4.4:-88662951 None:intergenic
AAAACCAATTCAATGGGATG+GGG 0.526952 4.4:+88664667 MS.gene034064:CDS
TTGGCTAACTCTGTTATGGC+AGG 0.527905 4.4:-88664614 None:intergenic
ATCGTATGTCAGCTCTTGCA+AGG 0.529691 4.4:-88665052 None:intergenic
TTGTCCAATATCAATATTGG+TGG 0.531639 4.4:+88662852 MS.gene034064:CDS
CTCAAGTTCAAGTGAAGTAG+TGG 0.532681 4.4:+88664870 MS.gene034064:CDS
TTTAGCTTGCGAAGAATCCC+GGG 0.534568 4.4:+88664238 MS.gene034064:CDS
TTTCCTGCCTGATGAGACCT+TGG 0.536083 4.4:-88663213 None:intergenic
AAGTAGTTCCAAGGTCTCAT+CGG 0.536913 4.4:+88663295 MS.gene034064:CDS
GAAGGGAGCTGTGTTAATGA+AGG 0.538115 4.4:+88663785 MS.gene034064:CDS
GGGTGTGGTAACTTTGGATA+CGG 0.539320 4.4:+88662728 MS.gene034064:CDS
TGAACCTGCAAAACTGGCAT+TGG 0.539713 4.4:+88662704 MS.gene034064:CDS
TCAGGCAGGAAAGTAGTTCA+AGG 0.539738 4.4:+88663224 MS.gene034064:CDS
GATAAAACTTCCTGAAGGGA+TGG 0.541390 4.4:-88664707 None:intergenic
ATGAGAATGACTCAGTGGCC+AGG 0.542434 4.4:+88663627 MS.gene034064:CDS
CGGAACGAAAAGGAAAGAAA+GGG 0.542783 4.4:+88663350 MS.gene034064:CDS
CAACGATGAACCTGCAAAAG+TGG 0.543120 4.4:+88662404 MS.gene034064:CDS
GTCTCATCGGGCAGGAAAGT+AGG 0.544739 4.4:+88663308 MS.gene034064:CDS
TGGCATGGAAACTATGGATA+CGG 0.546219 4.4:+88662434 MS.gene034064:CDS
GACGTGGAATTTGCAACTGA+AGG 0.548281 4.4:+88662612 MS.gene034064:CDS
GATACGGGGCTATGAATCAA+TGG 0.551635 4.4:+88664123 MS.gene034064:CDS
TTTATGTAGTTGAGTCATGT+TGG 0.552455 4.4:+88664179 MS.gene034064:CDS
TACTTTGAAGGAGGATCCGA+TGG 0.552856 4.4:+88662347 MS.gene034064:CDS
GGCACTCATCCTGACTGAGA+CGG 0.553076 4.4:-88662977 None:intergenic
TCATCACCAACTTCAACCCC+TGG 0.553210 4.4:-88663830 None:intergenic
ATTGGCGGGTGTGGTAACTT+TGG 0.553345 4.4:+88662722 MS.gene034064:CDS
AGCCTCCTTCATACAAGCAC+CGG 0.554334 4.4:-88662877 None:intergenic
TAAATCAGGACGGAACGAAA+AGG 0.554578 4.4:+88663340 MS.gene034064:CDS
ATTCAGTACACCTTTCGACT+TGG 0.555108 4.4:-88663417 None:intergenic
CTTATCTGATCAAGTGGATG+GGG 0.556245 4.4:+88662371 MS.gene034064:CDS
CAACTAGTATTGTTTCTTCG+GGG 0.557635 4.4:+88663945 MS.gene034064:CDS
AAAACTGGCATTGGCGGGTG+TGG 0.558834 4.4:+88662713 MS.gene034064:CDS
AGGGAGCTGTGTTAATGAAG+GGG 0.559797 4.4:+88663787 MS.gene034064:CDS
TTCTAAGGAAGTGGTTAAAG+CGG 0.560454 4.4:+88663157 MS.gene034064:CDS
TGCGTCGAAGATATTTCCTA+CGG 0.563479 4.4:+88664325 MS.gene034064:CDS
AACTAGTATTGTTTCTTCGG+GGG 0.564319 4.4:+88663946 MS.gene034064:CDS
GTTCCAAGGTCTCATCGGGC+AGG 0.565288 4.4:+88663300 MS.gene034064:CDS
CACAGATAAAACTTCCTGAA+GGG 0.565553 4.4:-88664711 None:intergenic
ATGGTGTTCACAGCACATAT+CGG 0.565881 4.4:-88664361 None:intergenic
GATACGGAATTTGCGACAGA+AGG 0.568390 4.4:+88662744 MS.gene034064:CDS
GGTTATGTATTTAAATGTAG+GGG 0.572990 4.4:-88664398 None:intergenic
AAGAAACAATACTAGTTGCA+AGG 0.576224 4.4:-88663940 None:intergenic
TCACAGATAAAACTTCCTGA+AGG 0.579555 4.4:-88664712 None:intergenic
GGTTTGGAAGATGGAAAAGG+GGG 0.583823 4.4:+88662158 None:intergenic
GTTCCAAGGTCTCATCAGGC+AGG 0.585792 4.4:+88663210 MS.gene034064:CDS
ATATCTTGGGATCTGTTCCA+GGG 0.585881 4.4:+88663813 MS.gene034064:CDS
TCTTATCTGATCAAGTGGAT+GGG 0.585927 4.4:+88662370 MS.gene034064:CDS
AAATTGTAGTTCTGATGACA+TGG 0.587546 4.4:+88663475 MS.gene034064:CDS
TCAAAGGCATCGTATCCAGC+TGG 0.588086 4.4:+88662795 MS.gene034064:CDS
AACTGAAGGCTGTAGTCTGA+AGG 0.588098 4.4:+88662626 MS.gene034064:CDS
CCTGCAAAACTGGCATTGGC+GGG 0.589355 4.4:+88662708 MS.gene034064:CDS
AGGCAAGCTCTGGTTGACCC+GGG 0.589790 4.4:-88664255 None:intergenic
GATGGTCTTATCTGATCAAG+TGG 0.591897 4.4:+88662365 MS.gene034064:CDS
ACTAGTATTGTTTCTTCGGG+GGG 0.593022 4.4:+88663947 MS.gene034064:CDS
TATGTCAGCTCTTGCAAGGG+AGG 0.595124 4.4:-88665048 None:intergenic
TGGTTTGGAAGATGGAAAAG+GGG 0.596359 4.4:+88662157 None:intergenic
AAAACTTGAAAGTAGTTCCA+AGG 0.596538 4.4:+88663196 MS.gene034064:CDS
ACTGTTCAAGATGATTCTGA+AGG 0.600204 4.4:+88663080 MS.gene034064:CDS
GTTATGTATTTAAATGTAGG+GGG 0.600728 4.4:-88664397 None:intergenic
TATCTGTGAATATATTGGTG+AGG 0.602098 4.4:+88664726 MS.gene034064:CDS
CGGGGCTATGAATCAATGGA+TGG 0.606352 4.4:+88664127 MS.gene034064:CDS
TTCCGGTGCTTGTATGAAGG+AGG 0.609421 4.4:+88662875 MS.gene034064:CDS
TGCTGATGGTACGAGTGTTG+AGG 0.609913 4.4:+88662206 MS.gene034064:CDS
CACTCATCCTGACTGAGACG+GGG 0.610274 4.4:-88662975 None:intergenic
AAAACTCGAAAGTAGTTCCA+AGG 0.612216 4.4:+88663286 MS.gene034064:CDS
GCGTCGAAGATATTTCCTAC+GGG 0.615003 4.4:+88664326 MS.gene034064:CDS
AGATTTATCCTATATATCAA+AGG 0.619809 4.4:+88662779 MS.gene034064:CDS
AAAAGTGGAATTGGTTGGCA+TGG 0.620927 4.4:+88662419 MS.gene034064:CDS
AAGTTCAAGTGAAGTAGTGG+AGG 0.627990 4.4:+88664873 MS.gene034064:CDS
GGCATCGTATCCAGCTGGCG+AGG 0.630693 4.4:+88662800 MS.gene034064:CDS
GATTCCATTTAATCATAATG+GGG 0.631488 4.4:+88664531 MS.gene034064:CDS
TGAGGTTCTTGAAGAAAAGG+AGG 0.634437 4.4:+88664744 MS.gene034064:CDS
CTTGGTCGTAGTAATTTGAG+TGG 0.634936 4.4:+88663602 MS.gene034064:CDS
CTGTTCAAGATGATTCTGAA+GGG 0.636210 4.4:+88663081 MS.gene034064:CDS
GAAGATCAAAAGCTTGAAAG+GGG 0.636952 4.4:+88664052 MS.gene034064:CDS
TTATGATCATCAAGACAGCA+GGG 0.640185 4.4:+88664990 MS.gene034064:CDS
CAGTCAGGATGAGTGCCGAA+AGG 0.642494 4.4:+88662983 MS.gene034064:CDS
TTTGATGGCAGTGGTTAAAG+CGG 0.642688 4.4:+88663247 MS.gene034064:CDS
ACATAATCATCATCATCATG+AGG 0.642724 4.4:+88663124 MS.gene034064:CDS
CCTGCAAAAGTGGAATTGGT+TGG 0.646230 4.4:+88662414 MS.gene034064:CDS
ACTTGATCAGATAAGACCAT+CGG 0.647896 4.4:-88662363 None:intergenic
TCGTATGTCAGCTCTTGCAA+GGG 0.649908 4.4:-88665051 None:intergenic
AAGTGACTGTACTTTGAAGG+AGG 0.650182 4.4:+88662338 MS.gene034064:CDS
CAGCTCAGTTTGGTAATGTG+GGG 0.652311 4.4:+88664917 MS.gene034064:CDS
ACATTCAGGATATATCATCT+CGG 0.654068 4.4:-88664419 None:intergenic
AAAACTGCTACCAAGTCGAA+AGG 0.659857 4.4:+88663407 MS.gene034064:CDS
GATACAGTTCGTGATTCCGA+TGG 0.661038 4.4:+88665090 MS.gene034064:CDS
CTCAAATTACTACGACCAAG+AGG 0.664835 4.4:-88663599 None:intergenic
ACGAGTGTTGAGGATAAGAG+TGG 0.665431 4.4:+88662216 MS.gene034064:CDS
TGCTTTGAAGAACAGTAGTG+AGG 0.666121 4.4:+88664081 MS.gene034064:CDS
TATCTTGGGATCTGTTCCAG+GGG 0.671761 4.4:+88663814 MS.gene034064:CDS
TTTGTTTGTTACAAACACTG+TGG 0.672214 4.4:+88662308 MS.gene034064:CDS
AAGCCTATAGTCTATGAGTG+TGG 0.672949 4.4:+88664568 MS.gene034064:CDS
GTTCTGTGGAATGTACTGGT+AGG 0.675695 4.4:+88665142 MS.gene034064:CDS
CAGTGGCCAGGAATAAAGTG+AGG 0.677717 4.4:+88663639 MS.gene034064:CDS
GCAGCAAATAACATGATGTG+AGG 0.681849 4.4:-88665015 None:intergenic
GGCAGGATATAGGGCCACGT+GGG 0.686351 4.4:+88664200 MS.gene034064:CDS
TTGATATATACAGGGCAGGG+TGG 0.688777 4.4:+88664001 MS.gene034064:CDS
GTTTGATGTCTAAATCAGGA+CGG 0.690095 4.4:+88663330 MS.gene034064:CDS
AATTGTAGTTCTGATGACAT+GGG 0.693133 4.4:+88663476 MS.gene034064:CDS
ATTCTGAGCATAAAGATTAG+GGG 0.694210 4.4:-88664962 None:intergenic
TGGCAGGATATAGGGCCACG+TGG 0.698447 4.4:+88664199 MS.gene034064:CDS
CTTCATCGCCAGATTCAGGG+TGG 0.729437 4.4:+88663887 MS.gene034064:CDS
TTATAAACCAGCTTCCCACG+TGG 0.745113 4.4:-88664214 None:intergenic
AAATTGATGAGATGAGACCA+CGG 0.746618 4.4:-88662496 None:intergenic
TGGTCATGAGAATGACTCAG+TGG 0.759725 4.4:+88663622 MS.gene034064:CDS
AATATTGATATTGGACAACG+AGG 0.767583 4.4:-88662847 None:intergenic
AATTCTGTTAGAGTGATACG+GGG 0.776687 4.4:+88664109 MS.gene034064:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTAAAACCAATTCAA+TGG + chr4.4:88664660-88664679 MS.gene034064:CDS 15.0%
!!! ATTTTTAAAACCAATTCAAT+GGG + chr4.4:88664661-88664680 MS.gene034064:CDS 15.0%
!! AGAAAGATATATGTTTATGA+TGG + chr4.4:88664154-88664173 MS.gene034064:CDS 20.0%
!! AGAATAGAGCTTAATATAAT+TGG + chr4.4:88663863-88663882 MS.gene034064:CDS 20.0%
!! AGATTCCATTTAATCATAAT+GGG + chr4.4:88664530-88664549 MS.gene034064:CDS 20.0%
!! AGATTTATCCTATATATCAA+AGG + chr4.4:88662779-88662798 MS.gene034064:CDS 20.0%
!!! AGTTTTATCTGTGAATATAT+TGG + chr4.4:88664721-88664740 MS.gene034064:CDS 20.0%
!!! ATAGGATAAATCTTGTTTTA+CGG - chr4.4:88662772-88662791 None:intergenic 20.0%
!!! TTTTCTCTTTTCTTTTTCAA+CGG - chr4.4:88663458-88663477 None:intergenic 20.0%
! AAAAAGTTCAAAACAAGAGA+AGG + chr4.4:88664298-88664317 MS.gene034064:CDS 25.0%
! AAAGGATGTAATTGTACTAA+TGG + chr4.4:88664460-88664479 MS.gene034064:CDS 25.0%
! AAATCTTTCTATGAAAAGCT+TGG - chr4.4:88663682-88663701 None:intergenic 25.0%
! AACAACAATAATCTTTGTGA+TGG + chr4.4:88664820-88664839 MS.gene034064:CDS 25.0%
! ATATCCCCATTATGATTAAA+TGG - chr4.4:88664538-88664557 None:intergenic 25.0%
! CAAATATGAAAGAAGTAAAG+AGG + chr4.4:88663729-88663748 MS.gene034064:CDS 25.0%
! CGGTTATGTATTTAAATGTA+GGG - chr4.4:88664402-88664421 None:intergenic 25.0%
! GAGATTCCATTTAATCATAA+TGG + chr4.4:88664529-88664548 MS.gene034064:CDS 25.0%
! GATTCCATTTAATCATAATG+GGG + chr4.4:88664531-88664550 MS.gene034064:CDS 25.0%
! GGTTATGTATTTAAATGTAG+GGG - chr4.4:88664401-88664420 None:intergenic 25.0%
! GTTATGTATTTAAATGTAGG+GGG - chr4.4:88664400-88664419 None:intergenic 25.0%
! TCGGTTATGTATTTAAATGT+AGG - chr4.4:88664403-88664422 None:intergenic 25.0%
! TGAGGTTAACATAAATTCTA+AGG + chr4.4:88663142-88663161 MS.gene034064:CDS 25.0%
!! ACTTCTTTCATATTTGACTT+TGG - chr4.4:88663725-88663744 None:intergenic 25.0%
!! TAACATAAATTCTAAGGAAG+TGG + chr4.4:88663148-88663167 MS.gene034064:CDS 25.0%
!! TTAGTACAATTACATCCTTT+TGG - chr4.4:88664460-88664479 None:intergenic 25.0%
!! TTTTCATAGAAAGATTTTGC+AGG + chr4.4:88663685-88663704 MS.gene034064:CDS 25.0%
!!! AAGTGTTGGTTATTTTCATT+AGG - chr4.4:88663536-88663555 None:intergenic 25.0%
!!! AGTGTTGGTTATTTTCATTA+GGG - chr4.4:88663535-88663554 None:intergenic 25.0%
!!! CAGATGTTTTGATATATACA+GGG + chr4.4:88663993-88664012 MS.gene034064:CDS 25.0%
!!! TCAGATGTTTTGATATATAC+AGG + chr4.4:88663992-88664011 MS.gene034064:CDS 25.0%
!!! TGATGATGATTATGTTTTTC+AGG - chr4.4:88663119-88663138 None:intergenic 25.0%
AAAACTTGAAAGTAGTTCCA+AGG + chr4.4:88663196-88663215 MS.gene034064:CDS 30.0%
AAGAAACAATACTAGTTGCA+AGG - chr4.4:88663943-88663962 None:intergenic 30.0%
AATATTGATATTGGACAACG+AGG - chr4.4:88662850-88662869 None:intergenic 30.0%
ACATAATCATCATCATCATG+AGG + chr4.4:88663124-88663143 MS.gene034064:CDS 30.0%
ACATTCAGGATATATCATCT+CGG - chr4.4:88664422-88664441 None:intergenic 30.0%
ACATTCTGAGCATAAAGATT+AGG - chr4.4:88664967-88664986 None:intergenic 30.0%
AGAAGATCAAAAGCTTGAAA+GGG + chr4.4:88664051-88664070 MS.gene034064:CDS 30.0%
AGAATTCTGTTAGAGTGATA+CGG + chr4.4:88664107-88664126 MS.gene034064:CDS 30.0%
AGTGATTTCATCTCATCAAA+TGG + chr4.4:88662659-88662678 MS.gene034064:CDS 30.0%
ATACGATGCCTTTGATATAT+AGG - chr4.4:88662790-88662809 None:intergenic 30.0%
ATTCTGAGCATAAAGATTAG+GGG - chr4.4:88664965-88664984 None:intergenic 30.0%
CATTCTGAGCATAAAGATTA+GGG - chr4.4:88664966-88664985 None:intergenic 30.0%
GAAAAGATACTCATCATTAC+CGG - chr4.4:88664782-88664801 None:intergenic 30.0%
GTACACAACAACATTTCTTA+TGG - chr4.4:88664495-88664514 None:intergenic 30.0%
GTTGAATATTTATGCCAAGT+TGG - chr4.4:88664636-88664655 None:intergenic 30.0%
TAAAACCAATTCAATGGGAT+GGG + chr4.4:88664666-88664685 MS.gene034064:CDS 30.0%
TATCTGTGAATATATTGGTG+AGG + chr4.4:88664726-88664745 MS.gene034064:CDS 30.0%
TCGTTGTCCAATATCAATAT+TGG + chr4.4:88662849-88662868 MS.gene034064:CDS 30.0%
TGTTGTTGTGTACTCAAAAA+TGG + chr4.4:88664502-88664521 MS.gene034064:CDS 30.0%
TTAAAACCAATTCAATGGGA+TGG + chr4.4:88664665-88664684 MS.gene034064:CDS 30.0%
TTGTCCAATATCAATATTGG+TGG + chr4.4:88662852-88662871 MS.gene034064:CDS 30.0%
TTTATGTAGTTGAGTCATGT+TGG + chr4.4:88664179-88664198 MS.gene034064:CDS 30.0%
! AATATCAATATTGGTGGTTC+CGG + chr4.4:88662858-88662877 MS.gene034064:CDS 30.0%
! AGAGATTTTCCAAGTTTATG+TGG + chr4.4:88662942-88662961 MS.gene034064:CDS 30.0%
! CTTCTTTTTGATATTGCCAT+CGG - chr4.4:88665109-88665128 None:intergenic 30.0%
! GATGAGTATCTTTTCGATAT+CGG + chr4.4:88664787-88664806 MS.gene034064:CDS 30.0%
! TACAATTACATCCTTTTGGA+GGG - chr4.4:88664456-88664475 None:intergenic 30.0%
! TCGTTCAACTCAAAATTTTG+AGG - chr4.4:88662285-88662304 None:intergenic 30.0%
! TGCAACTAGTATTGTTTCTT+CGG + chr4.4:88663943-88663962 MS.gene034064:CDS 30.0%
! TTTGTTTGTTACAAACACTG+TGG + chr4.4:88662308-88662327 MS.gene034064:CDS 30.0%
!! AAATTGTAGTTCTGATGACA+TGG + chr4.4:88663475-88663494 MS.gene034064:CDS 30.0%
!! AATTGTAGTTCTGATGACAT+GGG + chr4.4:88663476-88663495 MS.gene034064:CDS 30.0%
!! TATTTTAGAGACTTTCGATG+TGG + chr4.4:88662527-88662546 MS.gene034064:CDS 30.0%
!!! AAAAAGAAGTACTGCTTTTG+TGG + chr4.4:88665120-88665139 MS.gene034064:CDS 30.0%
!!! TCAAAATTTTGAGTTGAACG+AGG + chr4.4:88662284-88662303 MS.gene034064:CDS 30.0%
AAAACCAATTCAATGGGATG+GGG + chr4.4:88664667-88664686 MS.gene034064:CDS 35.0%
AAAACTCGAAAGTAGTTCCA+AGG + chr4.4:88663286-88663305 MS.gene034064:CDS 35.0%
AAATTGATGAGATGAGACCA+CGG - chr4.4:88662499-88662518 None:intergenic 35.0%
AACAAGTGACTGTACTTTGA+AGG + chr4.4:88662335-88662354 MS.gene034064:CDS 35.0%
AAGGTGTACTGAATCATTCT+GGG + chr4.4:88663426-88663445 MS.gene034064:CDS 35.0%
AATGAAGGGGAGAATATCTT+GGG + chr4.4:88663800-88663819 MS.gene034064:CDS 35.0%
AATTCTGTTAGAGTGATACG+GGG + chr4.4:88664109-88664128 MS.gene034064:CDS 35.0%
ACTGTTCAAGATGATTCTGA+AGG + chr4.4:88663080-88663099 MS.gene034064:CDS 35.0%
ACTTGAACTTGAGTCAGAAT+CGG - chr4.4:88664863-88664882 None:intergenic 35.0%
ACTTGATCAGATAAGACCAT+CGG - chr4.4:88662366-88662385 None:intergenic 35.0%
CAATTTCTTCACTTCCTTCA+AGG - chr4.4:88664278-88664297 None:intergenic 35.0%
CACAGATAAAACTTCCTGAA+GGG - chr4.4:88664714-88664733 None:intergenic 35.0%
CAGAAGATCAAAAGCTTGAA+AGG + chr4.4:88664050-88664069 MS.gene034064:CDS 35.0%
CTGTTCAAGATGATTCTGAA+GGG + chr4.4:88663081-88663100 MS.gene034064:CDS 35.0%
GAAAGTAGTTCAAGGTTTGA+TGG + chr4.4:88663232-88663251 MS.gene034064:CDS 35.0%
GAAGATCAAAAGCTTGAAAG+GGG + chr4.4:88664052-88664071 MS.gene034064:CDS 35.0%
GAATTCTGTTAGAGTGATAC+GGG + chr4.4:88664108-88664127 MS.gene034064:CDS 35.0%
GGAACCACCAATATTGATAT+TGG - chr4.4:88662859-88662878 None:intergenic 35.0%
GTAGGTTTGATGTCTAAATC+AGG + chr4.4:88663326-88663345 MS.gene034064:CDS 35.0%
GTTGTGTACTCAAAAATGGA+GGG + chr4.4:88664506-88664525 MS.gene034064:CDS 35.0%
GTTTGATGTCTAAATCAGGA+CGG + chr4.4:88663330-88663349 MS.gene034064:CDS 35.0%
TAATGAAGGGGAGAATATCT+TGG + chr4.4:88663799-88663818 MS.gene034064:CDS 35.0%
TCAAAGAAGAAAGCTCCTTT+CGG - chr4.4:88663001-88663020 None:intergenic 35.0%
TCAAATGGATGAGTCTACTT+TGG + chr4.4:88662674-88662693 MS.gene034064:CDS 35.0%
TCACAGATAAAACTTCCTGA+AGG - chr4.4:88664715-88664734 None:intergenic 35.0%
TCTTATCTGATCAAGTGGAT+GGG + chr4.4:88662370-88662389 MS.gene034064:CDS 35.0%
TGAAGACTGTACCTTGAAAA+AGG + chr4.4:88662467-88662486 MS.gene034064:CDS 35.0%
TGTTGTGTACTCAAAAATGG+AGG + chr4.4:88664505-88664524 MS.gene034064:CDS 35.0%
TTATGATCATCAAGACAGCA+GGG + chr4.4:88664990-88665009 MS.gene034064:CDS 35.0%
TTCTATGAAAAGCTTGGAAC+AGG - chr4.4:88663676-88663695 None:intergenic 35.0%
TTGTGTACTCAAAAATGGAG+GGG + chr4.4:88664507-88664526 MS.gene034064:CDS 35.0%
TTTATGATCATCAAGACAGC+AGG + chr4.4:88664989-88665008 MS.gene034064:CDS 35.0%
! AAAGGTGTACTGAATCATTC+TGG + chr4.4:88663425-88663444 MS.gene034064:CDS 35.0%
! AACTAGTATTGTTTCTTCGG+GGG + chr4.4:88663946-88663965 MS.gene034064:CDS 35.0%
! AGCGTAAATGTTTTTCCTCT+TGG + chr4.4:88663584-88663603 MS.gene034064:CDS 35.0%
! CAACTAGTATTGTTTCTTCG+GGG + chr4.4:88663945-88663964 MS.gene034064:CDS 35.0%
! CTTTCAAGCTTTTGATCTTC+TGG - chr4.4:88664052-88664071 None:intergenic 35.0%
! GATTTTCCAAGTTTATGTGG+AGG + chr4.4:88662945-88662964 MS.gene034064:CDS 35.0%
! GCAACTAGTATTGTTTCTTC+GGG + chr4.4:88663944-88663963 MS.gene034064:CDS 35.0%
! GTACAATTACATCCTTTTGG+AGG - chr4.4:88664457-88664476 None:intergenic 35.0%
! TGAAGGAGGCTTTAACTAAA+AGG + chr4.4:88662889-88662908 MS.gene034064:CDS 35.0%
! TGAGGATACTTTTCTTCGTT+GGG - chr4.4:88662267-88662286 None:intergenic 35.0%
! TGTTTTCCTCACTTTATTCC+TGG - chr4.4:88663648-88663667 None:intergenic 35.0%
! TTCTAAGGAAGTGGTTAAAG+CGG + chr4.4:88663157-88663176 MS.gene034064:CDS 35.0%
! TTGAGGATACTTTTCTTCGT+TGG - chr4.4:88662268-88662287 None:intergenic 35.0%
!! GAAAATTGATAATGTCCAGC+TGG + chr4.4:88663376-88663395 MS.gene034064:CDS 35.0%
!! GTTTTGATATATACAGGGCA+GGG + chr4.4:88663998-88664017 MS.gene034064:CDS 35.0%
!!! AACACTGCAACTTTTTTACG+AGG - chr4.4:88662921-88662940 None:intergenic 35.0%
!!! TGTTTTGATATATACAGGGC+AGG + chr4.4:88663997-88664016 MS.gene034064:CDS 35.0%
!!! TTGGGACACTTTTAAAGTGT+TGG - chr4.4:88663550-88663569 None:intergenic 35.0%
AAAACTGCTACCAAGTCGAA+AGG + chr4.4:88663407-88663426 MS.gene034064:CDS 40.0%
AAAAGTGGAATTGGTTGGCA+TGG + chr4.4:88662419-88662438 MS.gene034064:CDS 40.0%
AAACGATGAACCTGCAAAAC+TGG + chr4.4:88662698-88662717 MS.gene034064:CDS 40.0%
AAAGATTAGGGGAGCAACTA+TGG - chr4.4:88664954-88664973 None:intergenic 40.0%
AAGCCTATAGTCTATGAGTG+TGG + chr4.4:88664568-88664587 MS.gene034064:CDS 40.0%
AAGGAGGCTGAAAAAAGAAC+CGG + chr4.4:88664760-88664779 MS.gene034064:CDS 40.0%
AAGGGAGCTGTGTTAATGAA+GGG + chr4.4:88663786-88663805 MS.gene034064:CDS 40.0%
AAGTAGTTCCAAGGTCTCAT+CGG + chr4.4:88663205-88663224 MS.gene034064:CDS 40.0%
AAGTTCAAGTGAAGTAGTGG+AGG + chr4.4:88664873-88664892 MS.gene034064:CDS 40.0%
AATATCTTGGGATCTGTTCC+AGG + chr4.4:88663812-88663831 MS.gene034064:CDS 40.0%
AATCTATACCACCCTGAATC+TGG - chr4.4:88663898-88663917 None:intergenic 40.0%
ACAAGCTGCGAAAAAGCTTA+AGG + chr4.4:88663760-88663779 MS.gene034064:CDS 40.0%
ACGGAACGAAAAGGAAAGAA+AGG + chr4.4:88663349-88663368 MS.gene034064:CDS 40.0%
ACGTCGAAAGTCTCCAAAAT+AGG - chr4.4:88662597-88662616 None:intergenic 40.0%
AGTCATGTTGGCAGGATATA+GGG + chr4.4:88664191-88664210 MS.gene034064:CDS 40.0%
ATATCTTGGGATCTGTTCCA+GGG + chr4.4:88663813-88663832 MS.gene034064:CDS 40.0%
ATGGTGTTCACAGCACATAT+CGG - chr4.4:88664364-88664383 None:intergenic 40.0%
ATTCAGTACACCTTTCGACT+TGG - chr4.4:88663420-88663439 None:intergenic 40.0%
ATTGGTTGGCATGGAAACTA+TGG + chr4.4:88662428-88662447 MS.gene034064:CDS 40.0%
CATAACAGAGTTAGCCAACT+TGG + chr4.4:88664619-88664638 MS.gene034064:CDS 40.0%
CGAAAAAGCTTAAGGAGGAA+GGG + chr4.4:88663768-88663787 MS.gene034064:CDS 40.0%
CGGAACGAAAAGGAAAGAAA+GGG + chr4.4:88663350-88663369 MS.gene034064:CDS 40.0%
CTCAAATTACTACGACCAAG+AGG - chr4.4:88663602-88663621 None:intergenic 40.0%
CTCAAGTTCAAGTGAAGTAG+TGG + chr4.4:88664870-88664889 MS.gene034064:CDS 40.0%
CTTATCTGATCAAGTGGATG+GGG + chr4.4:88662371-88662390 MS.gene034064:CDS 40.0%
CTTGAAAAAGGAAGATACCG+TGG + chr4.4:88662479-88662498 MS.gene034064:CDS 40.0%
CTTGAACTTGAGTCAGAATC+GGG - chr4.4:88664862-88664881 None:intergenic 40.0%
CTTGGTCGTAGTAATTTGAG+TGG + chr4.4:88663602-88663621 MS.gene034064:CDS 40.0%
GATAAAACTTCCTGAAGGGA+TGG - chr4.4:88664710-88664729 None:intergenic 40.0%
GATAAGAGTGGCAAAGATTC+AGG + chr4.4:88662228-88662247 MS.gene034064:CDS 40.0%
GCAGCAAATAACATGATGTG+AGG - chr4.4:88665018-88665037 None:intergenic 40.0%
GTCTTATCTGATCAAGTGGA+TGG + chr4.4:88662369-88662388 MS.gene034064:CDS 40.0%
TAAATCAGGACGGAACGAAA+AGG + chr4.4:88663340-88663359 MS.gene034064:CDS 40.0%
TCAAGTGGATGGGGATAATT+TGG + chr4.4:88662380-88662399 MS.gene034064:CDS 40.0%
TCCTGAAGGGATGGAATTTA+AGG - chr4.4:88664701-88664720 None:intergenic 40.0%
TCCTTAAATTCCATCCCTTC+AGG + chr4.4:88664697-88664716 MS.gene034064:CDS 40.0%
TGAACCTGCAAAAGTGGAAT+TGG + chr4.4:88662410-88662429 MS.gene034064:CDS 40.0%
TGAGGTTCTTGAAGAAAAGG+AGG + chr4.4:88664744-88664763 MS.gene034064:CDS 40.0%
TGCGTCGAAGATATTTCCTA+CGG + chr4.4:88664325-88664344 MS.gene034064:CDS 40.0%
TGGCATGGAAACTATGGATA+CGG + chr4.4:88662434-88662453 MS.gene034064:CDS 40.0%
TGGTGAGGTTCTTGAAGAAA+AGG + chr4.4:88664741-88664760 MS.gene034064:CDS 40.0%
TTGAGTCAGAATCGGGAAAA+AGG - chr4.4:88664855-88664874 None:intergenic 40.0%
! AAGTGACTGTACTTTGAAGG+AGG + chr4.4:88662338-88662357 MS.gene034064:CDS 40.0%
! ACGCTCGAACTATGTGATTT+TGG - chr4.4:88663569-88663588 None:intergenic 40.0%
! ACTAGTATTGTTTCTTCGGG+GGG + chr4.4:88663947-88663966 MS.gene034064:CDS 40.0%
! CAAGTTGGCTAACTCTGTTA+TGG - chr4.4:88664621-88664640 None:intergenic 40.0%
! CGCTCGAACTATGTGATTTT+GGG - chr4.4:88663568-88663587 None:intergenic 40.0%
! TTCTGCTTCTTTTACGTCAG+TGG - chr4.4:88663036-88663055 None:intergenic 40.0%
! TTTGATGGCAGTGGTTAAAG+CGG + chr4.4:88663247-88663266 MS.gene034064:CDS 40.0%
!! CACGGTATCTTCCTTTTTCA+AGG - chr4.4:88662481-88662500 None:intergenic 40.0%
!! GATGGTCTTATCTGATCAAG+TGG + chr4.4:88662365-88662384 MS.gene034064:CDS 40.0%
!! TATTTTGGAGACTTTCGACG+TGG + chr4.4:88662596-88662615 MS.gene034064:CDS 40.0%
!! TGCTTTGAAGAACAGTAGTG+AGG + chr4.4:88664081-88664100 MS.gene034064:CDS 40.0%
AACTGAAGGCTGTAGTCTGA+AGG + chr4.4:88662626-88662645 MS.gene034064:CDS 45.0%
ACTATCGATGCAGCTCAGTT+TGG + chr4.4:88664907-88664926 MS.gene034064:CDS 45.0%
ACTCGTACCATCAGCAGAAA+CGG - chr4.4:88662202-88662221 None:intergenic 45.0%
AGCTGCGAAAAAGCTTAAGG+AGG + chr4.4:88663763-88663782 MS.gene034064:CDS 45.0%
AGGGAGCTGTGTTAATGAAG+GGG + chr4.4:88663787-88663806 MS.gene034064:CDS 45.0%
AGGGGGTTTCTCGTTATCTA+TGG - chr4.4:88664383-88664402 None:intergenic 45.0%
AGTAGTTCCAAGGTCTCATC+AGG + chr4.4:88663206-88663225 MS.gene034064:CDS 45.0%
AGTAGTTCCAAGGTCTCATC+GGG + chr4.4:88663206-88663225 MS.gene034064:CDS 45.0%
ATCGTATGTCAGCTCTTGCA+AGG - chr4.4:88665055-88665074 None:intergenic 45.0%
CAACGATGAACCTGCAAAAG+TGG + chr4.4:88662404-88662423 MS.gene034064:CDS 45.0%
CCTGCAAAAGTGGAATTGGT+TGG + chr4.4:88662414-88662433 MS.gene034064:CDS 45.0%
GAAGGGAGCTGTGTTAATGA+AGG + chr4.4:88663785-88663804 MS.gene034064:CDS 45.0%
GACGTGGAATTTGCAACTGA+AGG + chr4.4:88662612-88662631 MS.gene034064:CDS 45.0%
GAGTCATGTTGGCAGGATAT+AGG + chr4.4:88664190-88664209 MS.gene034064:CDS 45.0%
GATACAGTTCGTGATTCCGA+TGG + chr4.4:88665090-88665109 MS.gene034064:CDS 45.0%
GATACGGAATTTGCGACAGA+AGG + chr4.4:88662744-88662763 MS.gene034064:CDS 45.0%
GATACGGGGCTATGAATCAA+TGG + chr4.4:88664123-88664142 MS.gene034064:CDS 45.0%
GCATTGCCTCCACATAAACT+TGG - chr4.4:88662954-88662973 None:intergenic 45.0%
GCGAAAAAGCTTAAGGAGGA+AGG + chr4.4:88663767-88663786 MS.gene034064:CDS 45.0%
GCGTCGAAGATATTTCCTAC+GGG + chr4.4:88664326-88664345 MS.gene034064:CDS 45.0%
GGACCACACTCATAGACTAT+AGG - chr4.4:88664574-88664593 None:intergenic 45.0%
GGGACAAGATTGCAACATTC+AGG - chr4.4:88664436-88664455 None:intergenic 45.0%
GGGTGTGGTAACTTTGGATA+CGG + chr4.4:88662728-88662747 MS.gene034064:CDS 45.0%
TACACCCCATCCCATTGAAT+TGG - chr4.4:88664674-88664693 None:intergenic 45.0%
TATCTTGGGATCTGTTCCAG+GGG + chr4.4:88663814-88663833 MS.gene034064:CDS 45.0%
TCAGGCAGGAAAGTAGTTCA+AGG + chr4.4:88663224-88663243 MS.gene034064:CDS 45.0%
TCGTATGTCAGCTCTTGCAA+GGG - chr4.4:88665054-88665073 None:intergenic 45.0%
TGAACCTGCAAAACTGGCAT+TGG + chr4.4:88662704-88662723 MS.gene034064:CDS 45.0%
TGCAATCTTGTCCCTCCAAA+AGG + chr4.4:88664442-88664461 MS.gene034064:CDS 45.0%
TGGTCATGAGAATGACTCAG+TGG + chr4.4:88663622-88663641 MS.gene034064:CDS 45.0%
TGTAGTTGAGTCATGTTGGC+AGG + chr4.4:88664183-88664202 MS.gene034064:CDS 45.0%
TTATAAACCAGCTTCCCACG+TGG - chr4.4:88664217-88664236 None:intergenic 45.0%
TTGATATATACAGGGCAGGG+TGG + chr4.4:88664001-88664020 MS.gene034064:CDS 45.0%
TTGGCTAACTCTGTTATGGC+AGG - chr4.4:88664617-88664636 None:intergenic 45.0%
! ACTCTGTTATGGCAGGTTGA+AGG - chr4.4:88664610-88664629 None:intergenic 45.0%
! AGTTCAAGGTTTGATGGCAG+TGG + chr4.4:88663238-88663257 MS.gene034064:CDS 45.0%
! CACTTTTGCAGGTTCATCGT+TGG - chr4.4:88662406-88662425 None:intergenic 45.0%
! CGAAGACGATGTGCCTATTT+TGG + chr4.4:88662581-88662600 MS.gene034064:CDS 45.0%
! CGGAATTTTCTCTTTCCCGT+AGG - chr4.4:88664344-88664363 None:intergenic 45.0%
! CTCTGTTATGGCAGGTTGAA+GGG - chr4.4:88664609-88664628 None:intergenic 45.0%
! GTTCTGTGGAATGTACTGGT+AGG + chr4.4:88665142-88665161 MS.gene034064:CDS 45.0%
! TACTTTGAAGGAGGATCCGA+TGG + chr4.4:88662347-88662366 MS.gene034064:CDS 45.0%
! TGTGGTTCTGTGGAATGTAC+TGG + chr4.4:88665138-88665157 MS.gene034064:CDS 45.0%
!! ACGAGTGTTGAGGATAAGAG+TGG + chr4.4:88662216-88662235 MS.gene034064:CDS 45.0%
!! CAGCTCAGTTTGGTAATGTG+GGG + chr4.4:88664917-88664936 MS.gene034064:CDS 45.0%
!! CCAACCAATTCCACTTTTGC+AGG - chr4.4:88662417-88662436 None:intergenic 45.0%
!! GCAGCTCAGTTTGGTAATGT+GGG + chr4.4:88664916-88664935 MS.gene034064:CDS 45.0%
!! GTACTGCTTTTGTGGTTCTG+TGG + chr4.4:88665128-88665147 MS.gene034064:CDS 45.0%
!! GTTGAAGGGCACTTGCATTT+AGG - chr4.4:88664595-88664614 None:intergenic 45.0%
!! GTTTAGCTTGCGAAGAATCC+CGG + chr4.4:88664237-88664256 MS.gene034064:CDS 45.0%
!! TGCAGCTCAGTTTGGTAATG+TGG + chr4.4:88664915-88664934 MS.gene034064:CDS 45.0%
!! TTGATAATGTCCAGCTGGAC+AGG + chr4.4:88663381-88663400 MS.gene034064:CDS 45.0%
!! TTTAGCTTGCGAAGAATCCC+GGG + chr4.4:88664238-88664257 MS.gene034064:CDS 45.0%
ACTTCCTTCAAGGCAAGCTC+TGG - chr4.4:88664268-88664287 None:intergenic 50.0%
AGCCTCCTTCATACAAGCAC+CGG - chr4.4:88662880-88662899 None:intergenic 50.0%
ATGAGAATGACTCAGTGGCC+AGG + chr4.4:88663627-88663646 MS.gene034064:CDS 50.0%
CAGTGGCCAGGAATAAAGTG+AGG + chr4.4:88663639-88663658 MS.gene034064:CDS 50.0%
CGGGGCTATGAATCAATGGA+TGG + chr4.4:88664127-88664146 MS.gene034064:CDS 50.0%
GTTGCATCCGTTTCTGCTGA+TGG + chr4.4:88662192-88662211 MS.gene034064:CDS 50.0%
TATGTCAGCTCTTGCAAGGG+AGG - chr4.4:88665051-88665070 None:intergenic 50.0%
TCAACCAGAGCTTGCCTTGA+AGG + chr4.4:88664261-88664280 MS.gene034064:CDS 50.0%
TCATCACCAACTTCAACCCC+TGG - chr4.4:88663833-88663852 None:intergenic 50.0%
TCTGTTCCAGGGGTTGAAGT+TGG + chr4.4:88663824-88663843 MS.gene034064:CDS 50.0%
TGGTTCCGGTGCTTGTATGA+AGG + chr4.4:88662872-88662891 MS.gene034064:CDS 50.0%
TTCCGGTGCTTGTATGAAGG+AGG + chr4.4:88662875-88662894 MS.gene034064:CDS 50.0%
TTTCCTGCCTGATGAGACCT+TGG - chr4.4:88663216-88663235 None:intergenic 50.0%
! ACCTGCAAAACTGGCATTGG+CGG + chr4.4:88662707-88662726 MS.gene034064:CDS 50.0%
! ATTGGCGGGTGTGGTAACTT+TGG + chr4.4:88662722-88662741 MS.gene034064:CDS 50.0%
! TGCTGATGGTACGAGTGTTG+AGG + chr4.4:88662206-88662225 MS.gene034064:CDS 50.0%
!! TCAAAGGCATCGTATCCAGC+TGG + chr4.4:88662795-88662814 MS.gene034064:CDS 50.0%
!!! CAGTTTTAGACCTGTCCAGC+TGG - chr4.4:88663394-88663413 None:intergenic 50.0%
CACCCTGAATCTGGCGATGA+AGG - chr4.4:88663889-88663908 None:intergenic 55.0%
CACTCATCCTGACTGAGACG+GGG - chr4.4:88662978-88662997 None:intergenic 55.0%
CTTCATCGCCAGATTCAGGG+TGG + chr4.4:88663887-88663906 MS.gene034064:CDS 55.0%
GCACTCATCCTGACTGAGAC+GGG - chr4.4:88662979-88662998 None:intergenic 55.0%
GGCACTCATCCTGACTGAGA+CGG - chr4.4:88662980-88662999 None:intergenic 55.0%
GGCCTTCATCGCCAGATTCA+GGG + chr4.4:88663884-88663903 MS.gene034064:CDS 55.0%
GTCTCATCGGGCAGGAAAGT+AGG + chr4.4:88663308-88663327 MS.gene034064:CDS 55.0%
GTTCCAAGGTCTCATCAGGC+AGG + chr4.4:88663210-88663229 MS.gene034064:CDS 55.0%
TGGCCTTCATCGCCAGATTC+AGG + chr4.4:88663883-88663902 MS.gene034064:CDS 55.0%
TTTCCTGCCCGATGAGACCT+TGG - chr4.4:88663306-88663325 None:intergenic 55.0%
! AAGGCAAGCTCTGGTTGACC+CGG - chr4.4:88664259-88664278 None:intergenic 55.0%
!! AAAACTGGCATTGGCGGGTG+TGG + chr4.4:88662713-88662732 MS.gene034064:CDS 55.0%
!! CAGTCAGGATGAGTGCCGAA+AGG + chr4.4:88662983-88663002 MS.gene034064:CDS 55.0%
!! CCTGCAAAACTGGCATTGGC+GGG + chr4.4:88662708-88662727 MS.gene034064:CDS 55.0%
CAATGCTCCCCGTCTCAGTC+AGG + chr4.4:88662968-88662987 MS.gene034064:CDS 60.0%
GGCAGGATATAGGGCCACGT+GGG + chr4.4:88664200-88664219 MS.gene034064:CDS 60.0%
GTTCCAAGGTCTCATCGGGC+AGG + chr4.4:88663300-88663319 MS.gene034064:CDS 60.0%
TATAGGGCCACGTGGGAAGC+TGG + chr4.4:88664207-88664226 MS.gene034064:CDS 60.0%
TGGCAGGATATAGGGCCACG+TGG + chr4.4:88664199-88664218 MS.gene034064:CDS 60.0%
! AGGCAAGCTCTGGTTGACCC+GGG - chr4.4:88664258-88664277 None:intergenic 60.0%
! CCCGCCAATGCCAGTTTTGC+AGG - chr4.4:88662711-88662730 None:intergenic 60.0%
GACATAGCTGCCTCGCCAGC+TGG - chr4.4:88662813-88662832 None:intergenic 65.0%
GGCATCGTATCCAGCTGGCG+AGG + chr4.4:88662800-88662819 MS.gene034064:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 88662168 88665173 88662168 ID=MS.gene034064
chr4.4 mRNA 88662168 88665173 88662168 ID=MS.gene034064.t1;Parent=MS.gene034064
chr4.4 exon 88662168 88665173 88662168 ID=MS.gene034064.t1.exon1;Parent=MS.gene034064.t1
chr4.4 CDS 88662168 88665173 88662168 ID=cds.MS.gene034064.t1;Parent=MS.gene034064.t1
Gene Sequence

>MS.gene034064

ATGGAAAAGGGGGACTCAACTATTGTTGCATCCGTTTCTGCTGATGGTACGAGTGTTGAGGATAAGAGTGGCAAAGATTCAGGTGAAGCTGATAGTCCCAACGAAGAAAAGTATCCTCAAAATTTTGAGTTGAACGAGGATTTGTTTGTTACAAACACTGTGGAACAAACAAGTGACTGTACTTTGAAGGAGGATCCGATGGTCTTATCTGATCAAGTGGATGGGGATAATTTGGCCAACGATGAACCTGCAAAAGTGGAATTGGTTGGCATGGAAACTATGGATACGGAATTCGCAACTGAAGACTGTACCTTGAAAAAGGAAGATACCGTGGTCTCATCTCATCAATTTGATGTGATTATTTTAGAGACTTTCGATGTGGAATTTGCAACTGAAAGCTGTAGTTTGAAGAACGAAGACGATGTGCCTATTTTGGAGACTTTCGACGTGGAATTTGCAACTGAAGGCTGTAGTCTGAAGGACGAAAATGCAGTGATTTCATCTCATCAAATGGATGAGTCTACTTTGGTAAACGATGAACCTGCAAAACTGGCATTGGCGGGTGTGGTAACTTTGGATACGGAATTTGCGACAGAAGGCTCCGTAAAACAAGATTTATCCTATATATCAAAGGCATCGTATCCAGCTGGCGAGGCAGCTATGTCTGATGACTCAAAATCCTCGTTGTCCAATATCAATATTGGTGGTTCCGGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATGCTCCTCGTAAAAAAGTTGCAGTGTTCAGAGATTTTCCAAGTTTATGTGGAGGCAATGCTCCCCGTCTCAGTCAGGATGAGTGCCGAAAGGAGCTTTCTTCTTTGAAAAAAGTTGCAGCCACTGACGTAAAAGAAGCAGAAAATAACAAGAGAAAGTTTGATAACACTGTTCAAGATGATTCTGAAGGGAACACTAAACTTCCTGAAAAACATAATCATCATCATCATGAGGTTAACATAAATTCTAAGGAAGTGGTTAAAGCGGAAAACATGAACACTGTAAAACTTGAAAGTAGTTCCAAGGTCTCATCAGGCAGGAAAGTAGTTCAAGGTTTGATGGCAGTGGTTAAAGCGGAAAACATGAACACTGTAAAACTCGAAAGTAGTTCCAAGGTCTCATCGGGCAGGAAAGTAGGTTTGATGTCTAAATCAGGACGGAACGAAAAGGAAAGAAAGGGAAAGAAAATTGATAATGTCCAGCTGGACAGGTCTAAAACTGCTACCAAGTCGAAAGGTGTACTGAATCATTCTGGGCAGCAGCCGTTGAAAAAGAAAAGAGAAAATTGTAGTTCTGATGACATGGGTCAATTAGTAATGTTAGAGAAGAGTTCTCAAGACCCTAATGAAAATAACCAACACTTTAAAAGTGTCCCAAAATCACATAGTTCGAGCGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTGAGTGGTCATGAGAATGACTCAGTGGCCAGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCAAGCTTTTCATAGAAAGATTTTGCAGGAAGCTGAAGCAAAACCAAAGTCAAATATGAAAGAAGTAAAGAGGTTTGATTTACAAGCTGCGAAAAAGCTTAAGGAGGAAGGGAGCTGTGTTAATGAAGGGGAGAATATCTTGGGATCTGTTCCAGGGGTTGAAGTTGGTGATGAATTTCAGTTCAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATGTGAAACAAAAAGACAAGATCCTTGCAACTAGTATTGTTTCTTCGGGGGGCTATGCTGATGACTTAGATAACTCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAAAAGCTTGAAAGGGGAAATCTTGCTTTGAAGAACAGTAGTGAGGTAAAGAATTCTGTTAGAGTGATACGGGGCTATGAATCAATGGATGGTAAAAGAAAGATATATGTTTATGATGGACTTTATGTAGTTGAGTCATGTTGGCAGGATATAGGGCCACGTGGGAAGCTGGTTTATAAGTTTAGCTTGCGAAGAATCCCGGGTCAACCAGAGCTTGCCTTGAAGGAAGTGAAGAAATTGAAAAAGTTCAAAACAAGAGAAGGTCTATGCGTCGAAGATATTTCCTACGGGAAAGAGAAAATTCCGATATGTGCTGTGAACACCATAGATAACGAGAAACCCCCTACATTTAAATACATAACCGAGATGATATATCCTGAATGTTGCAATCTTGTCCCTCCAAAAGGATGTAATTGTACTAATGGATGCTCTGACCATAAGAAATGTTGTTGTGTACTCAAAAATGGAGGGGAGATTCCATTTAATCATAATGGGGATATTGTAGAAGTAAAGCCTATAGTCTATGAGTGTGGTCCTAAATGCAAGTGCCCTTCAACCTGCCATAACAGAGTTAGCCAACTTGGCATAAATATTCAACTCGAAATTTTTAAAACCAATTCAATGGGATGGGGTGTAAGATCCTTAAATTCCATCCCTTCAGGAAGTTTTATCTGTGAATATATTGGTGAGGTTCTTGAAGAAAAGGAGGCTGAAAAAAGAACCGGTAATGATGAGTATCTTTTCGATATCGGAAATAACAAAAACAACAATAATCTTTGTGATGGACTTTCAAACCTTTTTCCCGATTCTGACTCAAGTTCAAGTGAAGTAGTGGAGGATTCTGACTTCACTATCGATGCAGCTCAGTTTGGTAATGTGGGGAGATTTGTTAACCATAGTTGCTCCCCTAATCTTTATGCTCAGAATGTACTTTATGATCATCAAGACAGCAGGGTTCCTCACATCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGACATACGATTACAATTACACGATAGATACAGTTCGTGATTCCGATGGCAATATCAAAAAGAAGTACTGCTTTTGTGGTTCTGTGGAATGTACTGGTAGGTTGTATTGA
Protein sequence

>MS.gene034064.t1

MEKGDSTIVASVSADGTSVEDKSGKDSGEADSPNEEKYPQNFELNEDLFVTNTVEQTSDCTLKEDPMVLSDQVDGDNLANDEPAKVELVGMETMDTEFATEDCTLKKEDTVVSSHQFDVIILETFDVEFATESCSLKNEDDVPILETFDVEFATEGCSLKDENAVISSHQMDESTLVNDEPAKLALAGVVTLDTEFATEGSVKQDLSYISKASYPAGEAAMSDDSKSSLSNINIGGSGACMKEALTKRYAPRKKVAVFRDFPSLCGGNAPRLSQDECRKELSSLKKVAATDVKEAENNKRKFDNTVQDDSEGNTKLPEKHNHHHHEVNINSKEVVKAENMNTVKLESSSKVSSGRKVVQGLMAVVKAENMNTVKLESSSKVSSGRKVGLMSKSGRNEKERKGKKIDNVQLDRSKTATKSKGVLNHSGQQPLKKKRENCSSDDMGQLVMLEKSSQDPNENNQHFKSVPKSHSSSVNVFPLGRSNLSGHENDSVARNKVRKTLRLFQAFHRKILQEAEAKPKSNMKEVKRFDLQAAKKLKEEGSCVNEGENILGSVPGVEVGDEFQFRIELNIIGLHRQIQGGIDYVKQKDKILATSIVSSGGYADDLDNSDVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGYESMDGKRKIYVYDGLYVVESCWQDIGPRGKLVYKFSLRRIPGQPELALKEVKKLKKFKTREGLCVEDISYGKEKIPICAVNTIDNEKPPTFKYITEMIYPECCNLVPPKGCNCTNGCSDHKKCCCVLKNGGEIPFNHNGDIVEVKPIVYECGPKCKCPSTCHNRVSQLGINIQLEIFKTNSMGWGVRSLNSIPSGSFICEYIGEVLEEKEAEKRTGNDEYLFDIGNNKNNNNLCDGLSNLFPDSDSSSSEVVEDSDFTIDAAQFGNVGRFVNHSCSPNLYAQNVLYDHQDSRVPHIMLFAAENIPPLQELTYDYNYTIDTVRDSDGNIKKKYCFCGSVECTGRLY