Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016627.t1 | XP_003627797.2 | 95.4 | 367 | 16 | 1 | 1 | 366 | 1 | 367 | 1.10E-197 | 699.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016627.t1 | Q8L7A4 | 65.2 | 353 | 112 | 3 | 14 | 366 | 44 | 385 | 1.9e-126 | 453.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016627.t1 | G7LFA5 | 95.4 | 367 | 16 | 1 | 1 | 366 | 1 | 367 | 7.7e-198 | 699.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene016627 | MS.gene058821 | PPI |
| MS.gene02100 | MS.gene016627 | PPI |
| MS.gene016627 | MS.gene47863 | PPI |
| MS.gene016627 | MS.gene003302 | PPI |
| MS.gene016627 | MS.gene058831 | PPI |
| MS.gene27907 | MS.gene016627 | PPI |
| MS.gene016627 | MS.gene023667 | PPI |
| MS.gene016627 | MS.gene74542 | PPI |
| MS.gene016627 | MS.gene03069 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016627.t1 | MTR_8g038400 | 95.368 | 367 | 16 | 1 | 1 | 366 | 1 | 367 | 0.0 | 704 |
| MS.gene016627.t1 | MTR_3g017500 | 73.352 | 364 | 95 | 2 | 4 | 366 | 8 | 370 | 0.0 | 538 |
| MS.gene016627.t1 | MTR_3g017500 | 74.930 | 355 | 87 | 2 | 13 | 366 | 47 | 400 | 0.0 | 536 |
| MS.gene016627.t1 | MTR_8g088320 | 45.821 | 347 | 152 | 3 | 18 | 364 | 10 | 320 | 6.17e-110 | 324 |
| MS.gene016627.t1 | MTR_2g030230 | 44.669 | 347 | 154 | 3 | 18 | 364 | 19 | 327 | 4.68e-105 | 312 |
| MS.gene016627.t1 | MTR_3g067585 | 45.570 | 158 | 85 | 1 | 205 | 362 | 1 | 157 | 1.13e-38 | 136 |
| MS.gene016627.t1 | MTR_2g011590 | 43.312 | 157 | 88 | 1 | 206 | 362 | 1 | 156 | 1.75e-37 | 133 |
| MS.gene016627.t1 | MTR_8g107340 | 40.000 | 160 | 95 | 1 | 205 | 364 | 17 | 175 | 2.92e-37 | 133 |
| MS.gene016627.t1 | MTR_1g031650 | 42.581 | 155 | 87 | 2 | 209 | 362 | 6 | 159 | 4.24e-35 | 127 |
| MS.gene016627.t1 | MTR_6g069470 | 41.916 | 167 | 95 | 2 | 199 | 364 | 6 | 171 | 3.24e-33 | 122 |
| MS.gene016627.t1 | MTR_2g027100 | 43.312 | 157 | 88 | 1 | 205 | 360 | 1 | 157 | 9.90e-33 | 120 |
| MS.gene016627.t1 | MTR_4g084280 | 38.608 | 158 | 96 | 1 | 205 | 362 | 1 | 157 | 4.58e-30 | 113 |
| MS.gene016627.t1 | MTR_6g080710 | 45.161 | 124 | 63 | 3 | 11 | 130 | 9 | 131 | 3.34e-25 | 103 |
| MS.gene016627.t1 | MTR_8g464390 | 43.902 | 123 | 60 | 4 | 11 | 132 | 9 | 123 | 1.50e-24 | 104 |
| MS.gene016627.t1 | MTR_2g080950 | 43.902 | 123 | 60 | 3 | 11 | 132 | 9 | 123 | 2.24e-24 | 104 |
| MS.gene016627.t1 | MTR_1g031650 | 40.984 | 122 | 71 | 1 | 241 | 362 | 2 | 122 | 6.73e-23 | 93.2 |
| MS.gene016627.t1 | MTR_7g020860 | 37.500 | 144 | 65 | 3 | 28 | 147 | 513 | 655 | 9.03e-21 | 94.4 |
| MS.gene016627.t1 | MTR_8g100100 | 39.259 | 135 | 57 | 3 | 28 | 138 | 505 | 638 | 9.95e-21 | 94.4 |
| MS.gene016627.t1 | MTR_8g100100 | 39.259 | 135 | 57 | 3 | 28 | 138 | 511 | 644 | 1.06e-20 | 94.4 |
| MS.gene016627.t1 | MTR_1g069000 | 48.718 | 78 | 39 | 1 | 18 | 95 | 5 | 81 | 5.63e-19 | 88.6 |
| MS.gene016627.t1 | MTR_7g020860 | 53.165 | 79 | 34 | 2 | 28 | 104 | 513 | 590 | 6.26e-19 | 88.6 |
| MS.gene016627.t1 | MTR_7g099830 | 48.718 | 78 | 39 | 1 | 18 | 95 | 5 | 81 | 1.83e-18 | 86.7 |
| MS.gene016627.t1 | MTR_3g098680 | 36.923 | 130 | 57 | 3 | 27 | 132 | 507 | 635 | 1.31e-17 | 84.7 |
| MS.gene016627.t1 | MTR_8g067090 | 50.000 | 64 | 31 | 1 | 29 | 92 | 22 | 84 | 2.18e-16 | 80.1 |
| MS.gene016627.t1 | MTR_8g471120 | 50.000 | 64 | 31 | 1 | 29 | 92 | 22 | 84 | 2.18e-16 | 80.1 |
| MS.gene016627.t1 | MTR_4g074170 | 36.434 | 129 | 58 | 4 | 20 | 125 | 481 | 608 | 4.40e-16 | 80.1 |
| MS.gene016627.t1 | MTR_8g067080 | 45.714 | 70 | 37 | 1 | 23 | 92 | 16 | 84 | 2.00e-15 | 77.4 |
| MS.gene016627.t1 | MTR_8g067080 | 45.714 | 70 | 37 | 1 | 23 | 92 | 16 | 84 | 2.09e-15 | 77.4 |
| MS.gene016627.t1 | MTR_8g471110 | 45.714 | 70 | 37 | 1 | 23 | 92 | 16 | 84 | 2.09e-15 | 77.4 |
| MS.gene016627.t1 | MTR_1g008950 | 36.264 | 91 | 56 | 2 | 210 | 298 | 4 | 94 | 1.12e-11 | 62.0 |
| MS.gene016627.t1 | MTR_8g464390 | 43.750 | 80 | 37 | 3 | 53 | 132 | 1 | 72 | 1.48e-11 | 65.9 |
| MS.gene016627.t1 | MTR_2g080950 | 43.750 | 80 | 37 | 2 | 53 | 132 | 1 | 72 | 2.79e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016627.t1 | AT3G07940 | 65.156 | 353 | 112 | 3 | 14 | 366 | 44 | 385 | 2.81e-167 | 472 |
| MS.gene016627.t1 | AT4G21160 | 44.199 | 362 | 175 | 4 | 5 | 366 | 3 | 337 | 4.24e-111 | 328 |
| MS.gene016627.t1 | AT4G21160 | 44.199 | 362 | 175 | 4 | 5 | 366 | 3 | 337 | 4.24e-111 | 328 |
| MS.gene016627.t1 | AT4G21160 | 44.199 | 362 | 175 | 4 | 5 | 366 | 3 | 337 | 4.24e-111 | 328 |
| MS.gene016627.t1 | AT4G21160 | 44.199 | 362 | 175 | 4 | 5 | 366 | 3 | 337 | 4.24e-111 | 328 |
| MS.gene016627.t1 | AT4G05330 | 44.722 | 360 | 171 | 4 | 7 | 366 | 5 | 336 | 1.21e-109 | 324 |
| MS.gene016627.t1 | AT4G05330 | 44.722 | 360 | 171 | 4 | 7 | 366 | 5 | 336 | 1.21e-109 | 324 |
| MS.gene016627.t1 | AT4G05330 | 45.511 | 323 | 148 | 4 | 44 | 366 | 7 | 301 | 2.46e-96 | 289 |
| MS.gene016627.t1 | AT3G07940 | 57.895 | 228 | 85 | 3 | 14 | 241 | 44 | 260 | 2.09e-89 | 270 |
| MS.gene016627.t1 | AT1G70790 | 44.444 | 153 | 84 | 1 | 209 | 360 | 6 | 158 | 1.00e-37 | 134 |
| MS.gene016627.t1 | AT1G70790 | 44.444 | 153 | 84 | 1 | 209 | 360 | 6 | 158 | 1.00e-37 | 134 |
| MS.gene016627.t1 | AT1G70790 | 44.444 | 153 | 84 | 1 | 209 | 360 | 6 | 158 | 1.00e-37 | 134 |
| MS.gene016627.t1 | AT1G70800 | 42.949 | 156 | 88 | 1 | 205 | 360 | 10 | 164 | 1.97e-37 | 133 |
| MS.gene016627.t1 | AT1G73580 | 41.875 | 160 | 92 | 1 | 205 | 364 | 4 | 162 | 8.33e-37 | 131 |
| MS.gene016627.t1 | AT1G66360 | 43.125 | 160 | 88 | 2 | 205 | 362 | 1 | 159 | 5.77e-36 | 129 |
| MS.gene016627.t1 | AT1G70810 | 40.506 | 158 | 93 | 1 | 205 | 362 | 1 | 157 | 5.96e-35 | 126 |
| MS.gene016627.t1 | AT5G37740 | 40.373 | 161 | 92 | 2 | 205 | 362 | 1 | 160 | 5.37e-33 | 121 |
| MS.gene016627.t1 | AT2G01540 | 40.523 | 153 | 90 | 1 | 209 | 360 | 6 | 158 | 1.83e-32 | 120 |
| MS.gene016627.t1 | AT3G17980 | 35.294 | 170 | 107 | 2 | 195 | 364 | 5 | 171 | 1.16e-31 | 118 |
| MS.gene016627.t1 | AT5G47710 | 38.994 | 159 | 96 | 1 | 205 | 362 | 1 | 159 | 1.75e-31 | 117 |
| MS.gene016627.t1 | AT5G47710 | 38.994 | 159 | 96 | 1 | 205 | 362 | 1 | 159 | 1.75e-31 | 117 |
| MS.gene016627.t1 | AT5G47710 | 38.994 | 159 | 96 | 1 | 205 | 362 | 1 | 159 | 1.75e-31 | 117 |
| MS.gene016627.t1 | AT5G47710 | 38.994 | 159 | 96 | 1 | 205 | 362 | 1 | 159 | 1.75e-31 | 117 |
| MS.gene016627.t1 | AT1G48590 | 38.857 | 175 | 100 | 4 | 192 | 364 | 26 | 195 | 2.39e-31 | 118 |
| MS.gene016627.t1 | AT1G48590 | 39.506 | 162 | 93 | 3 | 205 | 364 | 6 | 164 | 4.40e-31 | 116 |
| MS.gene016627.t1 | AT1G48590 | 39.506 | 162 | 93 | 3 | 205 | 364 | 6 | 164 | 4.40e-31 | 116 |
| MS.gene016627.t1 | AT1G23140 | 37.342 | 158 | 98 | 1 | 205 | 362 | 1 | 157 | 3.39e-30 | 114 |
| MS.gene016627.t1 | AT5G37740 | 38.012 | 171 | 92 | 3 | 205 | 362 | 1 | 170 | 4.14e-30 | 114 |
| MS.gene016627.t1 | AT5G54310 | 42.857 | 140 | 71 | 4 | 11 | 149 | 9 | 140 | 1.66e-26 | 110 |
| MS.gene016627.t1 | AT3G17660 | 41.463 | 123 | 63 | 3 | 11 | 132 | 9 | 123 | 1.51e-24 | 99.4 |
| MS.gene016627.t1 | AT3G17660 | 41.463 | 123 | 63 | 3 | 11 | 132 | 9 | 123 | 3.41e-24 | 99.8 |
| MS.gene016627.t1 | AT3G17660 | 41.463 | 123 | 63 | 3 | 11 | 132 | 9 | 123 | 6.42e-24 | 99.4 |
| MS.gene016627.t1 | AT1G70790 | 42.857 | 119 | 67 | 1 | 243 | 360 | 3 | 121 | 1.86e-23 | 95.5 |
| MS.gene016627.t1 | AT1G10870 | 27.304 | 293 | 172 | 9 | 28 | 281 | 478 | 768 | 2.44e-19 | 90.1 |
| MS.gene016627.t1 | AT5G13300 | 40.310 | 129 | 55 | 3 | 28 | 135 | 512 | 639 | 2.61e-19 | 90.1 |
| MS.gene016627.t1 | AT5G61980 | 49.462 | 93 | 44 | 2 | 12 | 102 | 493 | 584 | 3.50e-19 | 89.7 |
| MS.gene016627.t1 | AT1G10870 | 26.846 | 298 | 172 | 9 | 28 | 281 | 478 | 773 | 1.12e-18 | 88.2 |
| MS.gene016627.t1 | AT3G53710 | 46.835 | 79 | 41 | 1 | 18 | 96 | 5 | 82 | 1.75e-17 | 84.0 |
| MS.gene016627.t1 | AT3G53710 | 46.835 | 79 | 41 | 1 | 18 | 96 | 5 | 82 | 1.75e-17 | 84.0 |
| MS.gene016627.t1 | AT3G53710 | 46.835 | 79 | 41 | 1 | 18 | 96 | 5 | 82 | 1.75e-17 | 84.0 |
| MS.gene016627.t1 | AT3G17660 | 36.585 | 123 | 59 | 3 | 11 | 132 | 9 | 113 | 2.76e-17 | 80.5 |
| MS.gene016627.t1 | AT2G37550 | 46.154 | 78 | 41 | 1 | 18 | 95 | 5 | 81 | 2.96e-17 | 83.2 |
| MS.gene016627.t1 | AT2G37550 | 46.154 | 78 | 41 | 1 | 18 | 95 | 5 | 81 | 2.96e-17 | 83.2 |
| MS.gene016627.t1 | AT1G60860 | 38.462 | 117 | 55 | 3 | 28 | 128 | 307 | 422 | 1.26e-16 | 81.6 |
| MS.gene016627.t1 | AT1G60860 | 38.462 | 117 | 55 | 3 | 28 | 128 | 367 | 482 | 1.49e-16 | 81.6 |
| MS.gene016627.t1 | AT1G60860 | 38.462 | 117 | 55 | 3 | 28 | 128 | 478 | 593 | 1.59e-16 | 81.6 |
| MS.gene016627.t1 | AT2G35210 | 47.826 | 69 | 35 | 1 | 23 | 91 | 16 | 83 | 7.52e-16 | 78.6 |
| MS.gene016627.t1 | AT2G35210 | 47.826 | 69 | 35 | 1 | 23 | 91 | 16 | 83 | 1.53e-15 | 77.8 |
| MS.gene016627.t1 | AT5G46750 | 47.826 | 69 | 35 | 1 | 23 | 91 | 16 | 83 | 1.64e-15 | 77.8 |
| MS.gene016627.t1 | AT4G17890 | 46.377 | 69 | 36 | 1 | 23 | 91 | 19 | 86 | 6.88e-15 | 75.9 |
| MS.gene016627.t1 | AT4G17890 | 46.377 | 69 | 36 | 1 | 23 | 91 | 19 | 86 | 8.95e-15 | 75.5 |
Find 65 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGAACTTACCACTTTA+AGG | 0.082747 | 8.2:+61567690 | None:intergenic |
| CCCTTATGTCATCCTTTCTT+TGG | 0.175750 | 8.2:-61567903 | MS.gene016627:CDS |
| ACCAACACTTACACCCATTT+TGG | 0.208803 | 8.2:+61569567 | None:intergenic |
| TATCCAAGCTATTGAATTAG+AGG | 0.240207 | 8.2:+61566682 | None:intergenic |
| TCAATTGAGGTATGTGGTTT+TGG | 0.244703 | 8.2:+61568575 | None:intergenic |
| TGAATTTGTTGGGTTGATTA+AGG | 0.275476 | 8.2:-61567978 | MS.gene016627:CDS |
| GCGGAACTCCAGAGCCAAAA+TGG | 0.294574 | 8.2:-61569581 | MS.gene016627:CDS |
| CCTTATGTCATCCTTTCTTT+GGG | 0.326292 | 8.2:-61567902 | MS.gene016627:CDS |
| TTTATTTGCATCAAGTGTTC+TGG | 0.328020 | 8.2:-61569379 | MS.gene016627:CDS |
| GGAATAATTTGAATCCAGTT+TGG | 0.333280 | 8.2:-61567754 | MS.gene016627:CDS |
| AATTGAACTTACCACTTTAA+GGG | 0.365775 | 8.2:+61567691 | None:intergenic |
| TCTGGCATACATAGAAGTTT+AGG | 0.375842 | 8.2:-61569361 | MS.gene016627:CDS |
| GCAGGTATGGTTGAATTTGT+TGG | 0.389459 | 8.2:-61567989 | MS.gene016627:CDS |
| TGATGCATCAAGCTGGAAAC+AGG | 0.392763 | 8.2:-61569617 | MS.gene016627:CDS |
| AAAATCAGATCTTCAAGTCT+TGG | 0.398805 | 8.2:-61569406 | MS.gene016627:intron |
| CAGGTATGGTTGAATTTGTT+GGG | 0.410672 | 8.2:-61567988 | MS.gene016627:CDS |
| AAGAGCGCTCTGAATATATC+AGG | 0.411157 | 8.2:-61568553 | MS.gene016627:intron |
| AGTTGATGCATTAGAGAAGT+TGG | 0.412436 | 8.2:-61568657 | MS.gene016627:CDS |
| TTAAGGGGAGGAATGTTCTC+TGG | 0.431886 | 8.2:+61567707 | None:intergenic |
| CCTGGTATGAAAGATGTATC+AGG | 0.434654 | 8.2:-61570070 | MS.gene016627:intron |
| CAAGGAAGAAGTGTATCATT+AGG | 0.434906 | 8.2:-61568372 | MS.gene016627:CDS |
| ATTAGACTTTCATTCCAAAC+TGG | 0.450148 | 8.2:+61567740 | None:intergenic |
| CTTCCTTGAGATGGTACAAA+TGG | 0.455222 | 8.2:+61568387 | None:intergenic |
| CGCTCTTCAATTGAGGTATG+TGG | 0.465006 | 8.2:+61568569 | None:intergenic |
| TGGCTCTGGAGTTCCGCAAT+CGG | 0.472934 | 8.2:+61569587 | None:intergenic |
| GCGCTGACAAGACATCATAT+TGG | 0.475095 | 8.2:-61568297 | MS.gene016627:CDS |
| CCCAAAGAAAGGATGACATA+AGG | 0.480442 | 8.2:+61567902 | None:intergenic |
| TTTACTGTTATAGGCAGGTA+TGG | 0.481028 | 8.2:-61568002 | MS.gene016627:intron |
| TTCAGAGCGCTCTTCAATTG+AGG | 0.487339 | 8.2:+61568562 | None:intergenic |
| CGAGGAACTGCAGTTTATGA+TGG | 0.487985 | 8.2:-61568433 | MS.gene016627:CDS |
| TCAAATTTGATGCATCAAGC+TGG | 0.501569 | 8.2:-61569624 | MS.gene016627:CDS |
| TTCAAAGAAGAGTACCTCAT+TGG | 0.502303 | 8.2:-61568226 | MS.gene016627:intron |
| TCACTTGGTGTCCCAAAGAA+AGG | 0.502315 | 8.2:+61567891 | None:intergenic |
| GTTGATGCATTAGAGAAGTT+GGG | 0.502430 | 8.2:-61568656 | MS.gene016627:CDS |
| CCAAAGAAAGGATGACATAA+GGG | 0.504098 | 8.2:+61567903 | None:intergenic |
| AATTATTAGGTACACACAAA+AGG | 0.506680 | 8.2:-61569650 | MS.gene016627:intron |
| CGGAACTCCAGAGCCAAAAT+GGG | 0.516197 | 8.2:-61569580 | MS.gene016627:CDS |
| ATTAAGGTTAAAGTTATGAA+AGG | 0.516242 | 8.2:-61567962 | MS.gene016627:CDS |
| TGTGCAGCTAGTATATGATA+AGG | 0.516945 | 8.2:-61566956 | MS.gene016627:intron |
| CTCGAGCTGCATGGACTCGT+TGG | 0.525843 | 8.2:+61566843 | None:intergenic |
| TCCTCAAGGCATGAAAGTCC+TGG | 0.540402 | 8.2:-61570088 | MS.gene016627:CDS |
| CATCATTGAAGCTAGATCAA+TGG | 0.540544 | 8.2:-61568691 | MS.gene016627:CDS |
| GAACATTCCTCCCCTTAAAG+TGG | 0.545423 | 8.2:-61567702 | MS.gene016627:intron |
| AAGGATGACATAAGGGTCAC+TGG | 0.548413 | 8.2:+61567910 | None:intergenic |
| AGTAACATACCTTTGATATG+TGG | 0.551071 | 8.2:+61569335 | None:intergenic |
| ATTGAACTTACCACTTTAAG+GGG | 0.551654 | 8.2:+61567692 | None:intergenic |
| CCTGATACATCTTTCATACC+AGG | 0.553792 | 8.2:+61570070 | None:intergenic |
| GACACGCATTCCGAAAGAGC+TGG | 0.570686 | 8.2:-61568275 | MS.gene016627:CDS |
| TCACTACATCTCTAATAGCT+AGG | 0.572515 | 8.2:+61567933 | None:intergenic |
| TACAAATTTCTCGAGCTGCA+TGG | 0.578821 | 8.2:+61566834 | None:intergenic |
| CGAGAAATTTGTAGCAAGCA+AGG | 0.579213 | 8.2:-61566824 | MS.gene016627:CDS |
| GAACTTACCACTTTAAGGGG+AGG | 0.583237 | 8.2:+61567695 | None:intergenic |
| TGTCCATTTGTACCATCTCA+AGG | 0.588611 | 8.2:-61568390 | MS.gene016627:CDS |
| GATACACTTCTTCCTTGAGA+TGG | 0.597028 | 8.2:+61568378 | None:intergenic |
| TAAATGAAACATTACCAATG+AGG | 0.599438 | 8.2:+61568212 | None:intergenic |
| AATTGCATATGAGAAATCTA+CGG | 0.604037 | 8.2:-61566866 | MS.gene016627:CDS |
| AAAGGCTAGAAATGTCCTCA+AGG | 0.614230 | 8.2:-61570102 | None:intergenic |
| TTTAGGAGTCCACATATCAA+AGG | 0.615847 | 8.2:-61569344 | MS.gene016627:intron |
| GACAACAGTCTTGTTAGAGA+TGG | 0.617464 | 8.2:-61566802 | MS.gene016627:CDS |
| ACCAGGACTTTCATGCCTTG+AGG | 0.620692 | 8.2:+61570087 | None:intergenic |
| GCAATTGCAGCTAAAACTAG+TGG | 0.625684 | 8.2:+61566883 | None:intergenic |
| GATGCATTAGAGAAGTTGGG+TGG | 0.652196 | 8.2:-61568653 | MS.gene016627:CDS |
| AGACTACAAAATGTTGAGAG+AGG | 0.659576 | 8.2:-61566733 | MS.gene016627:CDS |
| GGTGTTATATCTCTTGACGA+AGG | 0.697614 | 8.2:-61566781 | MS.gene016627:CDS |
| TAAGTGTAACATGAACTACT+CGG | 0.721246 | 8.2:+61568348 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATAAAGACT+TGG | + | chr8.2:61569207-61569226 | None:intergenic | 10.0% |
| !! | AAAAGTAAAAACTTATATCT+TGG | - | chr8.2:61567057-61567076 | MS.gene016627:intron | 15.0% |
| !! | AACTATACATAAATGAATAA+AGG | + | chr8.2:61569614-61569633 | None:intergenic | 15.0% |
| !! | ACTATACATAAATGAATAAA+GGG | + | chr8.2:61569613-61569632 | None:intergenic | 15.0% |
| !! | ATAAAAGAATATATTCCATT+AGG | + | chr8.2:61568693-61568712 | None:intergenic | 15.0% |
| !! | ATTAATCATTCTATTATTCT+GGG | + | chr8.2:61566762-61566781 | None:intergenic | 15.0% |
| !! | GTACCTAATAATTTATAAAA+AGG | + | chr8.2:61567124-61567143 | None:intergenic | 15.0% |
| !! | TATAATGAAAAATTTAGTAG+AGG | - | chr8.2:61566892-61566911 | MS.gene016627:CDS | 15.0% |
| !! | TTATCCAATTCTTAAAAATT+GGG | - | chr8.2:61569351-61569370 | MS.gene016627:CDS | 15.0% |
| !! | TTGATTAAATTTATTGTGTT+TGG | - | chr8.2:61569797-61569816 | MS.gene016627:intron | 15.0% |
| !! | TTTATCCAATTCTTAAAAAT+TGG | - | chr8.2:61569350-61569369 | MS.gene016627:CDS | 15.0% |
| !!! | AAATTCTTAACATCTTTTTA+GGG | - | chr8.2:61567751-61567770 | MS.gene016627:CDS | 15.0% |
| !!! | AAGCCTTTTTATAAATTATT+AGG | - | chr8.2:61567118-61567137 | MS.gene016627:intron | 15.0% |
| !!! | TCTTATTTAAACTTTTTTAC+TGG | - | chr8.2:61567786-61567805 | MS.gene016627:intron | 15.0% |
| !!! | TTTGGTTTTTTTATATTACT+TGG | + | chr8.2:61568191-61568210 | None:intergenic | 15.0% |
| !! | AAATTCTATCAACTATATGT+TGG | + | chr8.2:61569433-61569452 | None:intergenic | 20.0% |
| !! | AATTCTATCAACTATATGTT+GGG | + | chr8.2:61569432-61569451 | None:intergenic | 20.0% |
| !! | AATTTATAAAAAGGCTTATG+TGG | + | chr8.2:61567115-61567134 | None:intergenic | 20.0% |
| !! | ATGAACTAATAATGATATAG+AGG | + | chr8.2:61567316-61567335 | None:intergenic | 20.0% |
| !! | ATTAAGGTTAAAGTTATGAA+AGG | - | chr8.2:61568819-61568838 | MS.gene016627:intron | 20.0% |
| !! | CAATGTCATAAATTAAACTT+TGG | - | chr8.2:61567690-61567709 | MS.gene016627:intron | 20.0% |
| !! | CTATACATAAATGAATAAAG+GGG | + | chr8.2:61569612-61569631 | None:intergenic | 20.0% |
| !! | GATTAATCATTCTATTATTC+TGG | + | chr8.2:61566763-61566782 | None:intergenic | 20.0% |
| !! | GTATAGTTCATATTATAGAA+GGG | - | chr8.2:61569626-61569645 | MS.gene016627:CDS | 20.0% |
| !! | TAATTTATTATCCTCTTGAA+AGG | - | chr8.2:61567081-61567100 | MS.gene016627:intron | 20.0% |
| !! | TGTATAGTTCATATTATAGA+AGG | - | chr8.2:61569625-61569644 | MS.gene016627:CDS | 20.0% |
| !! | TTAAGAATTGGATAAAGATT+GGG | + | chr8.2:61569346-61569365 | None:intergenic | 20.0% |
| !! | TTAATCATTCTATTATTCTG+GGG | + | chr8.2:61566761-61566780 | None:intergenic | 20.0% |
| !! | TTGCATCAATTGATTAAAAA+AGG | + | chr8.2:61568642-61568661 | None:intergenic | 20.0% |
| !! | TTGTTACTATTTACTGTTAT+AGG | - | chr8.2:61568770-61568789 | MS.gene016627:intron | 20.0% |
| !! | TTTAAGAATTGGATAAAGAT+TGG | + | chr8.2:61569347-61569366 | None:intergenic | 20.0% |
| !!! | AGTATTTTTTTCACAAAAAC+AGG | + | chr8.2:61566850-61566869 | None:intergenic | 20.0% |
| !!! | ATTTTCAACTGATGATTTTA+TGG | - | chr8.2:61569852-61569871 | MS.gene016627:intron | 20.0% |
| !!! | CAAATTCTTAACATCTTTTT+AGG | - | chr8.2:61567750-61567769 | MS.gene016627:CDS | 20.0% |
| !!! | TTTTCAACTGATGATTTTAT+GGG | - | chr8.2:61569853-61569872 | MS.gene016627:intron | 20.0% |
| !!! | TTTTTTCCTGAAAAATCATT+AGG | + | chr8.2:61568326-61568345 | None:intergenic | 20.0% |
| ! | AAAATCCAAATCCAAAACAA+AGG | + | chr8.2:61569258-61569277 | None:intergenic | 25.0% |
| ! | AATTAGTAAGAAGAAACATC+TGG | + | chr8.2:61569662-61569681 | None:intergenic | 25.0% |
| ! | AATTATTAGGTACACACAAA+AGG | - | chr8.2:61567131-61567150 | MS.gene016627:intron | 25.0% |
| ! | AATTGAACTTACCACTTTAA+GGG | + | chr8.2:61569093-61569112 | None:intergenic | 25.0% |
| ! | AATTGCATATGAGAAATCTA+CGG | - | chr8.2:61569915-61569934 | MS.gene016627:intron | 25.0% |
| ! | ACTAATAATGATATAGAGGT+TGG | + | chr8.2:61567312-61567331 | None:intergenic | 25.0% |
| ! | AGGACATTTCTTAATAACAA+TGG | + | chr8.2:61568306-61568325 | None:intergenic | 25.0% |
| ! | ATCCCAAATAGAAATCAAAA+TGG | - | chr8.2:61569151-61569170 | MS.gene016627:intron | 25.0% |
| ! | GAAAAATATGAATGAAGTGA+AGG | - | chr8.2:61568936-61568955 | MS.gene016627:intron | 25.0% |
| ! | TAAATGAAACATTACCAATG+AGG | + | chr8.2:61568572-61568591 | None:intergenic | 25.0% |
| ! | TAACACTTATGTCCAAATAT+CGG | - | chr8.2:61569533-61569552 | MS.gene016627:intron | 25.0% |
| ! | TAATCATTCTATTATTCTGG+GGG | + | chr8.2:61566760-61566779 | None:intergenic | 25.0% |
| ! | TCATTGACAGTAATTTAAGA+TGG | + | chr8.2:61567662-61567681 | None:intergenic | 25.0% |
| ! | TTAATATTTGTTCTTGCAGT+CGG | - | chr8.2:61568986-61569005 | MS.gene016627:intron | 25.0% |
| ! | TTTGATACTGTCTTAGAATT+TGG | - | chr8.2:61569450-61569469 | MS.gene016627:intron | 25.0% |
| !! | AAATGTCCTAATGATTTTTC+AGG | - | chr8.2:61568317-61568336 | MS.gene016627:CDS | 25.0% |
| !! | TTCTATTTGTATGTTTTGTG+CGG | - | chr8.2:61568270-61568289 | MS.gene016627:CDS | 25.0% |
| !!! | ATTTTTCAGGAAAAAATACG+AGG | - | chr8.2:61568330-61568349 | MS.gene016627:CDS | 25.0% |
| !!! | TTAAGTACTGATTTTGATCA+AGG | + | chr8.2:61568028-61568047 | None:intergenic | 25.0% |
| AAAATCAGATCTTCAAGTCT+TGG | - | chr8.2:61567375-61567394 | MS.gene016627:intron | 30.0% | |
| AAAATGATCTCCGAATCTAA+TGG | - | chr8.2:61567014-61567033 | MS.gene016627:intron | 30.0% | |
| AAGAGATAAGAATACTCACT+TGG | + | chr8.2:61568908-61568927 | None:intergenic | 30.0% | |
| AAGTTCGATTCAACGAAAAT+CGG | + | chr8.2:61567240-61567259 | None:intergenic | 30.0% | |
| AATCATTCTATTATTCTGGG+GGG | + | chr8.2:61566759-61566778 | None:intergenic | 30.0% | |
| AATGAATAAAGGGGAAAGAA+AGG | + | chr8.2:61569603-61569622 | None:intergenic | 30.0% | |
| AGTAACATACCTTTGATATG+TGG | + | chr8.2:61567449-61567468 | None:intergenic | 30.0% | |
| ATCTGTAATAGTCAAACATG+TGG | + | chr8.2:61568068-61568087 | None:intergenic | 30.0% | |
| ATTAGACTTTCATTCCAAAC+TGG | + | chr8.2:61569044-61569063 | None:intergenic | 30.0% | |
| ATTGAACTTACCACTTTAAG+GGG | + | chr8.2:61569092-61569111 | None:intergenic | 30.0% | |
| CAATTGAACTTACCACTTTA+AGG | + | chr8.2:61569094-61569113 | None:intergenic | 30.0% | |
| GGAATAATTTGAATCCAGTT+TGG | - | chr8.2:61569027-61569046 | MS.gene016627:intron | 30.0% | |
| TAAGTGTAACATGAACTACT+CGG | + | chr8.2:61568436-61568455 | None:intergenic | 30.0% | |
| TACTATTTACTGTTATAGGC+AGG | - | chr8.2:61568774-61568793 | MS.gene016627:intron | 30.0% | |
| TAGTATTATGCATGACCTAA+TGG | - | chr8.2:61568675-61568694 | MS.gene016627:CDS | 30.0% | |
| TGAAGTGAAGGAAATGAAAA+AGG | - | chr8.2:61568948-61568967 | MS.gene016627:intron | 30.0% | |
| TTGGACATAAGTGTTATAAG+TGG | + | chr8.2:61569529-61569548 | None:intergenic | 30.0% | |
| TTTATTTGCATCAAGTGTTC+TGG | - | chr8.2:61567402-61567421 | MS.gene016627:intron | 30.0% | |
| ! | TTTTCACAAAAACAGGTGAA+AGG | + | chr8.2:61566843-61566862 | None:intergenic | 30.0% |
| !! | CTTATTTTCATAAGTCCTCT+AGG | - | chr8.2:61567844-61567863 | MS.gene016627:intron | 30.0% |
| !! | GCAACCCAATTTTTAAGAAT+TGG | + | chr8.2:61569358-61569377 | None:intergenic | 30.0% |
| !! | TGAATTTGTTGGGTTGATTA+AGG | - | chr8.2:61568803-61568822 | MS.gene016627:intron | 30.0% |
| !!! | ACATCTTTTTAGGGTTTGTT+TGG | - | chr8.2:61567760-61567779 | MS.gene016627:CDS | 30.0% |
| !!! | ATTTTGATCAAGGTACTGTT+TGG | + | chr8.2:61568018-61568037 | None:intergenic | 30.0% |
| !!! | ATTTTTTTCTCCGGATCTAA+AGG | + | chr8.2:61566999-61567018 | None:intergenic | 30.0% |
| !!! | CGCCATTTTGATTTCTATTT+GGG | + | chr8.2:61569156-61569175 | None:intergenic | 30.0% |
| !!! | TTTTACTTTTTAGAGCAGCA+CGG | + | chr8.2:61567047-61567066 | None:intergenic | 30.0% |
| ACCAATATCTCATGTGATGT+CGG | + | chr8.2:61567548-61567567 | None:intergenic | 35.0% | |
| AGACTACAAAATGTTGAGAG+AGG | - | chr8.2:61570048-61570067 | MS.gene016627:intron | 35.0% | |
| CAAAAACAGGTGAAAGGAAA+AGG | + | chr8.2:61566837-61566856 | None:intergenic | 35.0% | |
| CATCATTGAAGCTAGATCAA+TGG | - | chr8.2:61568090-61568109 | MS.gene016627:intron | 35.0% | |
| CCAAAGAAAGGATGACATAA+GGG | + | chr8.2:61568881-61568900 | None:intergenic | 35.0% | |
| CCTTATGTCATCCTTTCTTT+GGG | - | chr8.2:61568879-61568898 | MS.gene016627:intron | 35.0% | |
| GTGATGTACAATGTAGTGTA+TGG | - | chr8.2:61566942-61566961 | MS.gene016627:CDS | 35.0% | |
| GTTGATGCATTAGAGAAGTT+GGG | - | chr8.2:61568125-61568144 | MS.gene016627:intron | 35.0% | |
| TCAAAGGAATTCCATGTAGA+AGG | - | chr8.2:61567627-61567646 | MS.gene016627:intron | 35.0% | |
| TCAAATTTGATGCATCAAGC+TGG | - | chr8.2:61567157-61567176 | MS.gene016627:intron | 35.0% | |
| TCACTACATCTCTAATAGCT+AGG | + | chr8.2:61568851-61568870 | None:intergenic | 35.0% | |
| TCTGGCATACATAGAAGTTT+AGG | - | chr8.2:61567420-61567439 | MS.gene016627:intron | 35.0% | |
| TGGTTAAGTTTCCTTTCAAG+AGG | + | chr8.2:61567095-61567114 | None:intergenic | 35.0% | |
| TGTGCAGCTAGTATATGATA+AGG | - | chr8.2:61569825-61569844 | MS.gene016627:intron | 35.0% | |
| TTCAGATCTCTAGTACTCAA+AGG | - | chr8.2:61567611-61567630 | MS.gene016627:intron | 35.0% | |
| TTTACTGTTATAGGCAGGTA+TGG | - | chr8.2:61568779-61568798 | MS.gene016627:intron | 35.0% | |
| TTTAGGAGTCCACATATCAA+AGG | - | chr8.2:61567437-61567456 | MS.gene016627:intron | 35.0% | |
| ! | AGTTGATGCATTAGAGAAGT+TGG | - | chr8.2:61568124-61568143 | MS.gene016627:intron | 35.0% |
| ! | CAAGGAAGAAGTGTATCATT+AGG | - | chr8.2:61568409-61568428 | MS.gene016627:CDS | 35.0% |
| ! | CAGGTATGGTTGAATTTGTT+GGG | - | chr8.2:61568793-61568812 | MS.gene016627:intron | 35.0% |
| ! | TATTTGTATGTTTTGTGCGG+AGG | - | chr8.2:61568273-61568292 | MS.gene016627:CDS | 35.0% |
| ! | TCAATTGAGGTATGTGGTTT+TGG | + | chr8.2:61568209-61568228 | None:intergenic | 35.0% |
| ! | TTCGTTGAATCGAACTTGTT+AGG | - | chr8.2:61567243-61567262 | MS.gene016627:intron | 35.0% |
| ! | TTCTATTTGGGATCTCAACA+CGG | + | chr8.2:61569144-61569163 | None:intergenic | 35.0% |
| !! | TTCAAAGAAGAGTACCTCAT+TGG | - | chr8.2:61568555-61568574 | MS.gene016627:CDS | 35.0% |
| !!! | GCGCCATTTTGATTTCTATT+TGG | + | chr8.2:61569157-61569176 | None:intergenic | 35.0% |
| !!! | TCGGAGATCATTTTTTTCTC+CGG | + | chr8.2:61567008-61567027 | None:intergenic | 35.0% |
| AAAACAGGCTCGTAAGGTAA+GGG | - | chr8.2:61569496-61569515 | MS.gene016627:intron | 40.0% | |
| CATTCATGCAATCGTTGATC+TGG | - | chr8.2:61569281-61569300 | MS.gene016627:intron | 40.0% | |
| CCCAAAGAAAGGATGACATA+AGG | + | chr8.2:61568882-61568901 | None:intergenic | 40.0% | |
| CCCTTATGTCATCCTTTCTT+TGG | - | chr8.2:61568878-61568897 | MS.gene016627:intron | 40.0% | |
| CCTGATACATCTTTCATACC+AGG | + | chr8.2:61566714-61566733 | None:intergenic | 40.0% | |
| CCTGGTATGAAAGATGTATC+AGG | - | chr8.2:61566711-61566730 | MS.gene016627:CDS | 40.0% | |
| CCTTATAAAACAGGCTCGTA+AGG | - | chr8.2:61569490-61569509 | MS.gene016627:intron | 40.0% | |
| CGAGAAATTTGTAGCAAGCA+AGG | - | chr8.2:61569957-61569976 | MS.gene016627:intron | 40.0% | |
| CGGTAAAAACACGCGTTATA+AGG | - | chr8.2:61569006-61569025 | MS.gene016627:intron | 40.0% | |
| CTTACAAAACATCACGCATC+TGG | - | chr8.2:61569390-61569409 | MS.gene016627:CDS | 40.0% | |
| CTTCCTTGAGATGGTACAAA+TGG | + | chr8.2:61568397-61568416 | None:intergenic | 40.0% | |
| GATACACTTCTTCCTTGAGA+TGG | + | chr8.2:61568406-61568425 | None:intergenic | 40.0% | |
| GCAATTGCAGCTAAAACTAG+TGG | + | chr8.2:61569901-61569920 | None:intergenic | 40.0% | |
| GCAGGTATGGTTGAATTTGT+TGG | - | chr8.2:61568792-61568811 | MS.gene016627:intron | 40.0% | |
| GTTACCTAGTTGAGCAAGTT+TGG | + | chr8.2:61566919-61566938 | None:intergenic | 40.0% | |
| TAAAACAGGCTCGTAAGGTA+AGG | - | chr8.2:61569495-61569514 | MS.gene016627:intron | 40.0% | |
| TACAAATTTCTCGAGCTGCA+TGG | + | chr8.2:61569950-61569969 | None:intergenic | 40.0% | |
| TCCGACATCACATGAGATAT+TGG | - | chr8.2:61567544-61567563 | MS.gene016627:intron | 40.0% | |
| TGACGCTGTAATCCGATATT+TGG | + | chr8.2:61569548-61569567 | None:intergenic | 40.0% | |
| TGCTGTAAAGCCTTTAGATC+CGG | - | chr8.2:61566986-61567005 | MS.gene016627:intron | 40.0% | |
| TGTCCATTTGTACCATCTCA+AGG | - | chr8.2:61568391-61568410 | MS.gene016627:CDS | 40.0% | |
| ! | ACCAACACTTACACCCATTT+TGG | + | chr8.2:61567217-61567236 | None:intergenic | 40.0% |
| ! | CAGATGCGTGATGTTTTGTA+AGG | + | chr8.2:61569392-61569411 | None:intergenic | 40.0% |
| ! | CCTTACGAGCCTGTTTTATA+AGG | + | chr8.2:61569493-61569512 | None:intergenic | 40.0% |
| ! | CTTTTCTTGTCCAGCTCTTT+CGG | + | chr8.2:61568519-61568538 | None:intergenic | 40.0% |
| ! | GGTGTTATATCTCTTGACGA+AGG | - | chr8.2:61570000-61570019 | MS.gene016627:intron | 40.0% |
| ! | GTTTTCGTCAGATATCCTAG+AGG | + | chr8.2:61567862-61567881 | None:intergenic | 40.0% |
| ! | TAACGCGAGCCTTATAAAAC+AGG | - | chr8.2:61569481-61569500 | MS.gene016627:intron | 40.0% |
| !! | AAGAGCGCTCTGAATATATC+AGG | - | chr8.2:61568228-61568247 | MS.gene016627:CDS | 40.0% |
| !! | GACAACAGTCTTGTTAGAGA+TGG | - | chr8.2:61569979-61569998 | MS.gene016627:intron | 40.0% |
| !!! | ACGCTCCTTTGTTTTGGATT+TGG | - | chr8.2:61569250-61569269 | MS.gene016627:intron | 40.0% |
| AAGGATGACATAAGGGTCAC+TGG | + | chr8.2:61568874-61568893 | None:intergenic | 45.0% | |
| AAGGGGAAAGAAAGGAATCG+AGG | + | chr8.2:61569595-61569614 | None:intergenic | 45.0% | |
| AGACAGTCTCACAAGTCACA+AGG | + | chr8.2:61567819-61567838 | None:intergenic | 45.0% | |
| ATCAAGATCGGACACGACTT+TGG | - | chr8.2:61569312-61569331 | MS.gene016627:intron | 45.0% | |
| CAACTATATGTTGGGCCACT+CGG | + | chr8.2:61569424-61569443 | None:intergenic | 45.0% | |
| CGAGGAACTGCAGTTTATGA+TGG | - | chr8.2:61568348-61568367 | MS.gene016627:CDS | 45.0% | |
| CGCTCTTCAATTGAGGTATG+TGG | + | chr8.2:61568215-61568234 | None:intergenic | 45.0% | |
| GAACATTCCTCCCCTTAAAG+TGG | - | chr8.2:61569079-61569098 | MS.gene016627:intron | 45.0% | |
| GACAGTCTCACAAGTCACAA+GGG | + | chr8.2:61567818-61567837 | None:intergenic | 45.0% | |
| GATGCATTAGAGAAGTTGGG+TGG | - | chr8.2:61568128-61568147 | MS.gene016627:intron | 45.0% | |
| GCCAAAATGGGTGTAAGTGT+TGG | - | chr8.2:61567213-61567232 | MS.gene016627:intron | 45.0% | |
| GGCATGTATCTCCTTCTACA+TGG | + | chr8.2:61567641-61567660 | None:intergenic | 45.0% | |
| TGATGCATCAAGCTGGAAAC+AGG | - | chr8.2:61567164-61567183 | MS.gene016627:intron | 45.0% | |
| TTAAGGGGAGGAATGTTCTC+TGG | + | chr8.2:61569077-61569096 | None:intergenic | 45.0% | |
| ! | AGGACCAAACTTGCTCAACT+AGG | - | chr8.2:61566912-61566931 | MS.gene016627:CDS | 45.0% |
| ! | CTGGAGTGTCAGATCAAGAT+CGG | - | chr8.2:61569300-61569319 | MS.gene016627:intron | 45.0% |
| ! | GAACTTACCACTTTAAGGGG+AGG | + | chr8.2:61569089-61569108 | None:intergenic | 45.0% |
| ! | GCGCTGACAAGACATCATAT+TGG | - | chr8.2:61568484-61568503 | MS.gene016627:intron | 45.0% |
| ! | GGAGCGTTTGCGAAAAACAA+GGG | + | chr8.2:61569237-61569256 | None:intergenic | 45.0% |
| ! | TTCAGAGCGCTCTTCAATTG+AGG | + | chr8.2:61568222-61568241 | None:intergenic | 45.0% |
| !! | AGGAGCGTTTGCGAAAAACA+AGG | + | chr8.2:61569238-61569257 | None:intergenic | 45.0% |
| !! | TCACTTGGTGTCCCAAAGAA+AGG | + | chr8.2:61568893-61568912 | None:intergenic | 45.0% |
| !! | TCGCAAACGCTCCTTTGTTT+TGG | - | chr8.2:61569244-61569263 | MS.gene016627:intron | 45.0% |
| !!! | AACAGGTTTTGTGCCGATTG+CGG | - | chr8.2:61567181-61567200 | MS.gene016627:intron | 45.0% |
| !!! | ACTTACACCCATTTTGGCTC+TGG | + | chr8.2:61567211-61567230 | None:intergenic | 45.0% |
| ACCAGGACTTTCATGCCTTG+AGG | + | chr8.2:61566697-61566716 | None:intergenic | 50.0% | |
| ATCGAGGTTCTCTGCAGTCA+AGG | + | chr8.2:61569579-61569598 | None:intergenic | 50.0% | |
| CGGAACTCCAGAGCCAAAAT+GGG | - | chr8.2:61567201-61567220 | MS.gene016627:intron | 50.0% | |
| CGGTGCAGAGCCATTAGATT+CGG | + | chr8.2:61567027-61567046 | None:intergenic | 50.0% | |
| TCCTCAAGGCATGAAAGTCC+TGG | - | chr8.2:61566693-61566712 | MS.gene016627:CDS | 50.0% | |
| GACACGCATTCCGAAAGAGC+TGG | - | chr8.2:61568506-61568525 | MS.gene016627:intron | 55.0% | |
| GCGGAACTCCAGAGCCAAAA+TGG | - | chr8.2:61567200-61567219 | MS.gene016627:intron | 55.0% | |
| !! | TGGCTCTGGAGTTCCGCAAT+CGG | + | chr8.2:61567197-61567216 | None:intergenic | 55.0% |
| CTCGAGCTGCATGGACTCGT+TGG | + | chr8.2:61569941-61569960 | None:intergenic | 60.0% | |
| ! | CATCTGGAGCGTGATCCGAG+TGG | - | chr8.2:61569406-61569425 | MS.gene016627:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 61566690 | 61570113 | 61566690 | ID=MS.gene016627 |
| chr8.2 | mRNA | 61566690 | 61570113 | 61566690 | ID=MS.gene016627.t1;Parent=MS.gene016627 |
| chr8.2 | exon | 61570071 | 61570113 | 61570071 | ID=MS.gene016627.t1.exon1;Parent=MS.gene016627.t1 |
| chr8.2 | CDS | 61570071 | 61570113 | 61570071 | ID=cds.MS.gene016627.t1;Parent=MS.gene016627.t1 |
| chr8.2 | exon | 61569579 | 61569663 | 61569579 | ID=MS.gene016627.t1.exon2;Parent=MS.gene016627.t1 |
| chr8.2 | CDS | 61569579 | 61569663 | 61569579 | ID=cds.MS.gene016627.t1;Parent=MS.gene016627.t1 |
| chr8.2 | exon | 61569345 | 61569420 | 61569345 | ID=MS.gene016627.t1.exon3;Parent=MS.gene016627.t1 |
| chr8.2 | CDS | 61569345 | 61569420 | 61569345 | ID=cds.MS.gene016627.t1;Parent=MS.gene016627.t1 |
| chr8.2 | exon | 61568554 | 61568717 | 61568554 | ID=MS.gene016627.t1.exon4;Parent=MS.gene016627.t1 |
| chr8.2 | CDS | 61568554 | 61568717 | 61568554 | ID=cds.MS.gene016627.t1;Parent=MS.gene016627.t1 |
| chr8.2 | exon | 61568227 | 61568464 | 61568227 | ID=MS.gene016627.t1.exon5;Parent=MS.gene016627.t1 |
| chr8.2 | CDS | 61568227 | 61568464 | 61568227 | ID=cds.MS.gene016627.t1;Parent=MS.gene016627.t1 |
| chr8.2 | exon | 61567895 | 61568011 | 61567895 | ID=MS.gene016627.t1.exon6;Parent=MS.gene016627.t1 |
| chr8.2 | CDS | 61567895 | 61568011 | 61567895 | ID=cds.MS.gene016627.t1;Parent=MS.gene016627.t1 |
| chr8.2 | exon | 61567703 | 61567798 | 61567703 | ID=MS.gene016627.t1.exon7;Parent=MS.gene016627.t1 |
| chr8.2 | CDS | 61567703 | 61567798 | 61567703 | ID=cds.MS.gene016627.t1;Parent=MS.gene016627.t1 |
| chr8.2 | exon | 61566690 | 61566971 | 61566690 | ID=MS.gene016627.t1.exon8;Parent=MS.gene016627.t1 |
| chr8.2 | CDS | 61566690 | 61566971 | 61566690 | ID=cds.MS.gene016627.t1;Parent=MS.gene016627.t1 |
| Gene Sequence |
| Protein sequence |
