Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023667.t1 | AET04392.2 | 98.1 | 320 | 6 | 0 | 11 | 330 | 3 | 322 | 4.70E-176 | 627.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023667.t1 | Q9FVJ3 | 72.3 | 328 | 82 | 2 | 11 | 329 | 9 | 336 | 1.5e-135 | 483.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023667.t1 | G7L835 | 98.1 | 320 | 6 | 0 | 11 | 330 | 3 | 322 | 3.4e-176 | 627.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023667 | MS.gene058831 | PPI |
| MS.gene90412 | MS.gene023667 | PPI |
| MS.gene21056 | MS.gene023667 | PPI |
| MS.gene92445 | MS.gene023667 | PPI |
| MS.gene005346 | MS.gene023667 | PPI |
| MS.gene27907 | MS.gene023667 | PPI |
| MS.gene90413 | MS.gene023667 | PPI |
| MS.gene050322 | MS.gene023667 | PPI |
| MS.gene007227 | MS.gene023667 | PPI |
| MS.gene35396 | MS.gene023667 | PPI |
| MS.gene65789 | MS.gene023667 | PPI |
| MS.gene74542 | MS.gene023667 | PPI |
| MS.gene058831 | MS.gene023667 | PPI |
| MS.gene023667 | MS.gene03069 | PPI |
| MS.gene056211 | MS.gene023667 | PPI |
| MS.gene023667 | MS.gene071746 | PPI |
| MS.gene40748 | MS.gene023667 | PPI |
| MS.gene034468 | MS.gene023667 | PPI |
| MS.gene02100 | MS.gene023667 | PPI |
| MS.gene016627 | MS.gene023667 | PPI |
| MS.gene84339 | MS.gene023667 | PPI |
| MS.gene039700 | MS.gene023667 | PPI |
| MS.gene03069 | MS.gene023667 | PPI |
| MS.gene66767 | MS.gene023667 | PPI |
| MS.gene023667 | MS.gene47863 | PPI |
| MS.gene43051 | MS.gene023667 | PPI |
| MS.gene003302 | MS.gene023667 | PPI |
| MS.gene20985 | MS.gene023667 | PPI |
| MS.gene85519 | MS.gene023667 | PPI |
| MS.gene058821 | MS.gene023667 | PPI |
| MS.gene47863 | MS.gene023667 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023667.t1 | MTR_8g088320 | 97.819 | 321 | 7 | 0 | 10 | 330 | 2 | 322 | 0.0 | 654 |
| MS.gene023667.t1 | MTR_2g030230 | 78.419 | 329 | 69 | 2 | 2 | 330 | 3 | 329 | 0.0 | 537 |
| MS.gene023667.t1 | MTR_3g017500 | 45.559 | 349 | 152 | 3 | 17 | 328 | 21 | 368 | 2.19e-112 | 331 |
| MS.gene023667.t1 | MTR_3g017500 | 45.559 | 349 | 152 | 3 | 17 | 328 | 51 | 398 | 8.08e-112 | 330 |
| MS.gene023667.t1 | MTR_8g038400 | 44.571 | 350 | 157 | 2 | 16 | 328 | 16 | 365 | 2.86e-109 | 323 |
| MS.gene023667.t1 | MTR_8g107340 | 39.205 | 176 | 106 | 1 | 153 | 328 | 1 | 175 | 5.33e-42 | 144 |
| MS.gene023667.t1 | MTR_6g069470 | 43.750 | 160 | 89 | 1 | 169 | 328 | 13 | 171 | 5.40e-42 | 144 |
| MS.gene023667.t1 | MTR_2g027100 | 45.783 | 166 | 77 | 2 | 169 | 327 | 1 | 160 | 6.61e-41 | 140 |
| MS.gene023667.t1 | MTR_3g067585 | 43.125 | 160 | 90 | 1 | 169 | 328 | 1 | 159 | 1.31e-40 | 140 |
| MS.gene023667.t1 | MTR_2g011590 | 40.764 | 157 | 92 | 1 | 172 | 328 | 3 | 158 | 1.62e-39 | 137 |
| MS.gene023667.t1 | MTR_1g031650 | 44.304 | 158 | 86 | 2 | 172 | 328 | 5 | 161 | 3.71e-36 | 129 |
| MS.gene023667.t1 | MTR_4g084280 | 40.625 | 160 | 94 | 1 | 169 | 328 | 1 | 159 | 1.64e-34 | 124 |
| MS.gene023667.t1 | MTR_8g464390 | 39.597 | 149 | 74 | 4 | 17 | 159 | 16 | 154 | 8.43e-28 | 113 |
| MS.gene023667.t1 | MTR_2g080950 | 44.828 | 116 | 56 | 2 | 17 | 132 | 16 | 123 | 7.24e-27 | 110 |
| MS.gene023667.t1 | MTR_6g080710 | 35.323 | 201 | 97 | 5 | 20 | 219 | 19 | 187 | 2.89e-26 | 105 |
| MS.gene023667.t1 | MTR_1g031650 | 42.742 | 124 | 70 | 1 | 205 | 328 | 2 | 124 | 1.41e-23 | 94.7 |
| MS.gene023667.t1 | MTR_1g069000 | 46.739 | 92 | 47 | 2 | 14 | 104 | 1 | 91 | 3.77e-21 | 94.4 |
| MS.gene023667.t1 | MTR_7g099830 | 45.455 | 88 | 47 | 1 | 14 | 101 | 1 | 87 | 1.21e-20 | 92.4 |
| MS.gene023667.t1 | MTR_7g020860 | 41.538 | 130 | 51 | 5 | 29 | 134 | 514 | 642 | 1.92e-20 | 92.8 |
| MS.gene023667.t1 | MTR_8g100100 | 35.507 | 138 | 64 | 3 | 29 | 142 | 512 | 648 | 8.10e-19 | 87.8 |
| MS.gene023667.t1 | MTR_8g100100 | 35.507 | 138 | 64 | 3 | 29 | 142 | 506 | 642 | 8.38e-19 | 87.8 |
| MS.gene023667.t1 | MTR_7g020860 | 43.220 | 118 | 42 | 5 | 32 | 125 | 517 | 633 | 9.82e-19 | 87.4 |
| MS.gene023667.t1 | MTR_8g067080 | 41.772 | 79 | 45 | 1 | 20 | 98 | 13 | 90 | 3.55e-17 | 82.0 |
| MS.gene023667.t1 | MTR_8g067080 | 41.772 | 79 | 45 | 1 | 20 | 98 | 13 | 90 | 3.72e-17 | 82.0 |
| MS.gene023667.t1 | MTR_8g471110 | 41.772 | 79 | 45 | 1 | 20 | 98 | 13 | 90 | 3.72e-17 | 82.0 |
| MS.gene023667.t1 | MTR_4g074170 | 38.532 | 109 | 55 | 3 | 29 | 126 | 491 | 598 | 5.15e-17 | 82.4 |
| MS.gene023667.t1 | MTR_8g067090 | 38.614 | 101 | 57 | 4 | 20 | 119 | 13 | 109 | 6.05e-17 | 81.3 |
| MS.gene023667.t1 | MTR_8g471120 | 38.614 | 101 | 57 | 4 | 20 | 119 | 13 | 109 | 6.05e-17 | 81.3 |
| MS.gene023667.t1 | MTR_3g098680 | 40.777 | 103 | 54 | 3 | 29 | 125 | 509 | 610 | 3.40e-16 | 80.1 |
| MS.gene023667.t1 | MTR_8g464390 | 35.398 | 113 | 57 | 4 | 53 | 159 | 1 | 103 | 9.42e-13 | 68.9 |
| MS.gene023667.t1 | MTR_2g080950 | 41.250 | 80 | 39 | 2 | 53 | 132 | 1 | 72 | 8.21e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023667.t1 | AT4G21160 | 71.818 | 330 | 84 | 2 | 10 | 330 | 8 | 337 | 0.0 | 507 |
| MS.gene023667.t1 | AT4G21160 | 71.818 | 330 | 84 | 2 | 10 | 330 | 8 | 337 | 0.0 | 507 |
| MS.gene023667.t1 | AT4G21160 | 71.818 | 330 | 84 | 2 | 10 | 330 | 8 | 337 | 0.0 | 507 |
| MS.gene023667.t1 | AT4G21160 | 71.818 | 330 | 84 | 2 | 10 | 330 | 8 | 337 | 0.0 | 507 |
| MS.gene023667.t1 | AT4G05330 | 69.643 | 336 | 94 | 2 | 3 | 330 | 1 | 336 | 2.17e-178 | 497 |
| MS.gene023667.t1 | AT4G05330 | 69.643 | 336 | 94 | 2 | 3 | 330 | 1 | 336 | 2.17e-178 | 497 |
| MS.gene023667.t1 | AT4G05330 | 70.847 | 295 | 78 | 2 | 44 | 330 | 7 | 301 | 2.32e-157 | 442 |
| MS.gene023667.t1 | AT3G07940 | 47.774 | 337 | 151 | 2 | 17 | 328 | 47 | 383 | 1.57e-113 | 334 |
| MS.gene023667.t1 | AT3G07940 | 47.642 | 212 | 86 | 2 | 19 | 205 | 49 | 260 | 1.60e-63 | 202 |
| MS.gene023667.t1 | AT1G73580 | 43.558 | 163 | 91 | 1 | 166 | 328 | 1 | 162 | 1.02e-40 | 140 |
| MS.gene023667.t1 | AT5G37740 | 43.558 | 163 | 88 | 2 | 169 | 328 | 1 | 162 | 1.92e-40 | 140 |
| MS.gene023667.t1 | AT1G70790 | 46.753 | 154 | 81 | 1 | 173 | 325 | 6 | 159 | 2.82e-40 | 140 |
| MS.gene023667.t1 | AT1G70790 | 46.753 | 154 | 81 | 1 | 173 | 325 | 6 | 159 | 2.82e-40 | 140 |
| MS.gene023667.t1 | AT1G70790 | 46.753 | 154 | 81 | 1 | 173 | 325 | 6 | 159 | 2.82e-40 | 140 |
| MS.gene023667.t1 | AT3G17980 | 40.625 | 160 | 94 | 1 | 169 | 328 | 13 | 171 | 2.88e-39 | 137 |
| MS.gene023667.t1 | AT2G01540 | 42.208 | 154 | 88 | 1 | 173 | 325 | 6 | 159 | 2.18e-37 | 132 |
| MS.gene023667.t1 | AT1G70800 | 39.241 | 158 | 95 | 1 | 169 | 326 | 10 | 166 | 4.29e-37 | 131 |
| MS.gene023667.t1 | AT5G37740 | 41.040 | 173 | 88 | 3 | 169 | 328 | 1 | 172 | 4.42e-37 | 131 |
| MS.gene023667.t1 | AT1G70810 | 39.375 | 160 | 96 | 1 | 169 | 328 | 1 | 159 | 9.66e-37 | 130 |
| MS.gene023667.t1 | AT1G48590 | 39.375 | 160 | 96 | 1 | 169 | 328 | 6 | 164 | 6.07e-36 | 128 |
| MS.gene023667.t1 | AT1G48590 | 39.375 | 160 | 96 | 1 | 169 | 328 | 6 | 164 | 6.07e-36 | 128 |
| MS.gene023667.t1 | AT1G48590 | 39.375 | 160 | 96 | 1 | 169 | 328 | 37 | 195 | 7.61e-36 | 129 |
| MS.gene023667.t1 | AT1G66360 | 41.615 | 161 | 93 | 1 | 169 | 328 | 1 | 161 | 9.04e-36 | 128 |
| MS.gene023667.t1 | AT5G47710 | 40.606 | 165 | 85 | 2 | 169 | 326 | 1 | 159 | 1.14e-34 | 124 |
| MS.gene023667.t1 | AT5G47710 | 40.606 | 165 | 85 | 2 | 169 | 326 | 1 | 159 | 1.14e-34 | 124 |
| MS.gene023667.t1 | AT5G47710 | 40.606 | 165 | 85 | 2 | 169 | 326 | 1 | 159 | 1.14e-34 | 124 |
| MS.gene023667.t1 | AT5G47710 | 40.606 | 165 | 85 | 2 | 169 | 326 | 1 | 159 | 1.14e-34 | 124 |
| MS.gene023667.t1 | AT1G23140 | 35.000 | 160 | 103 | 1 | 169 | 328 | 1 | 159 | 2.42e-31 | 116 |
| MS.gene023667.t1 | AT3G17660 | 39.231 | 130 | 69 | 3 | 5 | 132 | 2 | 123 | 2.38e-29 | 111 |
| MS.gene023667.t1 | AT3G17660 | 39.231 | 130 | 69 | 3 | 5 | 132 | 2 | 123 | 8.18e-29 | 111 |
| MS.gene023667.t1 | AT3G17660 | 39.231 | 130 | 69 | 3 | 5 | 132 | 2 | 123 | 1.96e-28 | 110 |
| MS.gene023667.t1 | AT5G54310 | 38.406 | 138 | 75 | 3 | 5 | 140 | 2 | 131 | 4.93e-27 | 111 |
| MS.gene023667.t1 | AT1G70790 | 43.333 | 120 | 67 | 1 | 207 | 325 | 3 | 122 | 2.38e-25 | 99.8 |
| MS.gene023667.t1 | AT1G48590 | 31.250 | 160 | 77 | 2 | 169 | 328 | 37 | 163 | 5.84e-22 | 91.3 |
| MS.gene023667.t1 | AT3G17660 | 33.846 | 130 | 66 | 3 | 5 | 132 | 2 | 113 | 4.06e-20 | 87.8 |
| MS.gene023667.t1 | AT2G37550 | 44.318 | 88 | 48 | 1 | 14 | 101 | 1 | 87 | 1.45e-19 | 89.4 |
| MS.gene023667.t1 | AT2G37550 | 44.318 | 88 | 48 | 1 | 14 | 101 | 1 | 87 | 1.45e-19 | 89.4 |
| MS.gene023667.t1 | AT3G53710 | 43.182 | 88 | 49 | 1 | 14 | 101 | 1 | 87 | 1.65e-19 | 89.4 |
| MS.gene023667.t1 | AT3G53710 | 43.182 | 88 | 49 | 1 | 14 | 101 | 1 | 87 | 1.65e-19 | 89.4 |
| MS.gene023667.t1 | AT3G53710 | 43.182 | 88 | 49 | 1 | 14 | 101 | 1 | 87 | 1.65e-19 | 89.4 |
| MS.gene023667.t1 | AT2G35210 | 40.594 | 101 | 55 | 3 | 20 | 119 | 13 | 109 | 6.86e-19 | 86.7 |
| MS.gene023667.t1 | AT2G35210 | 40.594 | 101 | 55 | 3 | 20 | 119 | 13 | 109 | 1.16e-18 | 86.3 |
| MS.gene023667.t1 | AT5G13300 | 37.500 | 128 | 58 | 4 | 29 | 135 | 513 | 639 | 1.32e-18 | 87.4 |
| MS.gene023667.t1 | AT1G60860 | 35.570 | 149 | 76 | 5 | 29 | 158 | 308 | 455 | 2.30e-18 | 86.3 |
| MS.gene023667.t1 | AT1G60860 | 35.570 | 149 | 76 | 5 | 29 | 158 | 368 | 515 | 2.98e-18 | 85.9 |
| MS.gene023667.t1 | AT1G60860 | 35.570 | 149 | 76 | 5 | 29 | 158 | 479 | 626 | 3.32e-18 | 85.9 |
| MS.gene023667.t1 | AT1G10870 | 29.231 | 195 | 110 | 7 | 29 | 208 | 479 | 660 | 6.83e-18 | 85.1 |
| MS.gene023667.t1 | AT1G10870 | 30.000 | 200 | 107 | 8 | 29 | 208 | 479 | 665 | 1.21e-17 | 84.3 |
| MS.gene023667.t1 | AT5G46750 | 43.750 | 80 | 44 | 1 | 20 | 99 | 13 | 91 | 2.68e-17 | 82.4 |
| MS.gene023667.t1 | AT5G61980 | 46.053 | 76 | 38 | 2 | 29 | 102 | 510 | 584 | 8.23e-17 | 82.0 |
| MS.gene023667.t1 | AT4G17890 | 40.777 | 103 | 53 | 4 | 18 | 119 | 17 | 112 | 9.10e-17 | 80.9 |
| MS.gene023667.t1 | AT4G17890 | 39.604 | 101 | 56 | 3 | 20 | 119 | 16 | 112 | 1.25e-16 | 80.5 |
| MS.gene023667.t1 | AT3G17660 | 37.500 | 80 | 42 | 2 | 53 | 132 | 1 | 72 | 1.65e-12 | 65.9 |
Find 62 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATAGACGGTTGGAATT+TGG | 0.165631 | 4.3:-12808244 | MS.gene023667:CDS |
| GCCATTGCAGAATTTATTAA+AGG | 0.185985 | 4.3:+12805160 | None:intergenic |
| TGTAACCTTACCAAACTTAT+TGG | 0.212227 | 4.3:+12805517 | None:intergenic |
| AAGAAGATTGAAGGATTTAT+TGG | 0.242961 | 4.3:-12807697 | MS.gene023667:CDS |
| GAAGGAATGGTAGAATTTAT+TGG | 0.252239 | 4.3:-12805845 | MS.gene023667:CDS |
| ATTCTCCACATTCGACATTC+TGG | 0.255352 | 4.3:+12805005 | None:intergenic |
| GAATAAACTTACGCCCATTT+AGG | 0.255700 | 4.3:+12807630 | None:intergenic |
| GTAGTGCTCCGGATCCTAAA+TGG | 0.293236 | 4.3:-12807644 | MS.gene023667:CDS |
| TTGTCCGTTCCTCAGCAATT+TGG | 0.300614 | 4.3:-12805541 | MS.gene023667:CDS |
| GCAATGGCATTTGGAGATAC+TGG | 0.302939 | 4.3:-12805145 | MS.gene023667:CDS |
| GTTCTCGGCTGATGATATAA+TGG | 0.310794 | 4.3:-12805206 | MS.gene023667:CDS |
| ATAAATTCTGCAATGGCATT+TGG | 0.314753 | 4.3:-12805154 | MS.gene023667:CDS |
| ACAATAGACGGTTGGAATTT+GGG | 0.317344 | 4.3:-12808243 | MS.gene023667:CDS |
| ATCTAGTGGTTCAAAGAATA+TGG | 0.320374 | 4.3:-12806021 | MS.gene023667:intron |
| TTCTTCAGGTCAGCAAATAT+TGG | 0.330231 | 4.3:-12807421 | MS.gene023667:intron |
| GGAGTAATTTGAATCCAGTT+TGG | 0.344163 | 4.3:-12805579 | MS.gene023667:CDS |
| GCAATTTGGACCAATAAGTT+TGG | 0.353128 | 4.3:-12805527 | MS.gene023667:intron |
| ATGATATGCGTATAGGAAAA+TGG | 0.354086 | 4.3:-12805114 | MS.gene023667:CDS |
| TCATGACTGGCGTCTGGTCC+TGG | 0.366903 | 4.3:+12806470 | None:intergenic |
| GTGGATGTCTCTTGATCATT+AGG | 0.379350 | 4.3:-12804966 | None:intergenic |
| ATCTGCCAATTCAATTTATG+AGG | 0.388056 | 4.3:-12806519 | MS.gene023667:CDS |
| ATAAGTTCCTCGTTCCAAAC+TGG | 0.391227 | 4.3:+12805565 | None:intergenic |
| AAAAGCCTCATAAATTGAAT+TGG | 0.395677 | 4.3:+12806514 | None:intergenic |
| CCAAGCTTCAAAACAACATA+TGG | 0.397782 | 4.3:+12805758 | None:intergenic |
| CTGTTCAGACGACTGTAATA+AGG | 0.399690 | 4.3:-12805600 | MS.gene023667:CDS |
| TTGTATGCTTAAAATGTTGT+GGG | 0.417828 | 4.3:-12807393 | MS.gene023667:CDS |
| ATTTGATCATGACTTGTTCT+CGG | 0.424924 | 4.3:-12805221 | MS.gene023667:CDS |
| TACAGGTAAAAGAAGATTGA+AGG | 0.424972 | 4.3:-12807706 | MS.gene023667:intron |
| TTCTCGGCTGATGATATAAT+GGG | 0.430169 | 4.3:-12805205 | MS.gene023667:CDS |
| AGCATAGTCAATATCATTGA+TGG | 0.443930 | 4.3:-12805058 | MS.gene023667:CDS |
| TGTCTGTAACATTGGATGAA+TGG | 0.468188 | 4.3:-12806586 | MS.gene023667:CDS |
| CGTTCTTCATGACTGGCGTC+TGG | 0.471968 | 4.3:+12806464 | None:intergenic |
| AGTCAATATCATTGATGGTA+AGG | 0.482666 | 4.3:-12805053 | MS.gene023667:CDS |
| AAACATAACATACTTGATAC+AGG | 0.485779 | 4.3:+12808217 | None:intergenic |
| TAATGACAACGCGCTTATAG+AGG | 0.487418 | 4.3:-12805083 | MS.gene023667:CDS |
| ATAGATGCAATGATGGAAGT+TGG | 0.488889 | 4.3:-12806551 | MS.gene023667:CDS |
| ATGTTTGATGATATGCGTAT+AGG | 0.495087 | 4.3:-12805121 | MS.gene023667:CDS |
| TTGTGCTGATTGTAGTGCTC+CGG | 0.495186 | 4.3:-12807655 | MS.gene023667:CDS |
| AAGAACGTGCAAAATTCATC+AGG | 0.500258 | 4.3:-12806448 | MS.gene023667:intron |
| TAGTGCTCCGGATCCTAAAT+GGG | 0.500733 | 4.3:-12807643 | MS.gene023667:CDS |
| ACCTTTAATAAATTCTGCAA+TGG | 0.502560 | 4.3:-12805161 | MS.gene023667:CDS |
| ACTTACGCCCATTTAGGATC+CGG | 0.503153 | 4.3:+12807636 | None:intergenic |
| TGATGAAATAGATGCAATGA+TGG | 0.538280 | 4.3:-12806558 | MS.gene023667:CDS |
| AATTAAACTTAGAACTTGAG+TGG | 0.550387 | 4.3:-12804985 | MS.gene023667:CDS |
| GTCGATGAACAATAGACGGT+TGG | 0.555087 | 4.3:-12808251 | MS.gene023667:CDS |
| TTTGTATGCTTAAAATGTTG+TGG | 0.556153 | 4.3:-12807394 | MS.gene023667:CDS |
| TGTGGGGTGCACAGAAGTCT+TGG | 0.558109 | 4.3:-12807376 | MS.gene023667:CDS |
| ATTTAGCAATCAGAGATATG+AGG | 0.559392 | 4.3:-12805790 | MS.gene023667:CDS |
| CCGGAAGGATATACAAAACC+AGG | 0.574677 | 4.3:-12806488 | MS.gene023667:CDS |
| ATGGTGAAAATAGGAAGGAA+TGG | 0.575850 | 4.3:-12805858 | MS.gene023667:intron |
| TGGTCCAAATTGCTGAGGAA+CGG | 0.581432 | 4.3:+12805537 | None:intergenic |
| GATAGCTTTCGAAAATCTAG+TGG | 0.590041 | 4.3:-12806035 | MS.gene023667:CDS |
| GATGCAATGATGGAAGTTGG+AGG | 0.591464 | 4.3:-12806548 | MS.gene023667:CDS |
| TGGAATGCTGAAAGTGAAAG+TGG | 0.593242 | 4.3:-12805825 | MS.gene023667:CDS |
| CTGAAAGTGAAAGTGGTCAA+AGG | 0.594303 | 4.3:-12805818 | MS.gene023667:CDS |
| GGATGTCGATGAACAATAGA+CGG | 0.602168 | 4.3:-12808255 | MS.gene023667:CDS |
| TCTTGGCACTCATATATCAA+AGG | 0.604306 | 4.3:-12807359 | MS.gene023667:intron |
| CTTATTGGTCCAAATTGCTG+AGG | 0.607175 | 4.3:+12805532 | None:intergenic |
| TGTATGCTTAAAATGTTGTG+GGG | 0.631760 | 4.3:-12807392 | MS.gene023667:CDS |
| AAGCTCCAGAATGTCGAATG+TGG | 0.636564 | 4.3:-12805010 | MS.gene023667:CDS |
| TTTGAATCCAGTTTGGAACG+AGG | 0.647447 | 4.3:-12805572 | MS.gene023667:CDS |
| ATAGACGGTTGGAATTTGGG+AGG | 0.688403 | 4.3:-12808240 | MS.gene023667:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAATTTCACACTTAAA+TGG | + | chr4.3:12807051-12807070 | None:intergenic | 15.0% |
| !! | GATATAATCCATTAAAATTT+AGG | + | chr4.3:12805161-12805180 | None:intergenic | 15.0% |
| !! | TGAAATAATTGAAAAACTAA+CGG | - | chr4.3:12805962-12805981 | MS.gene023667:intron | 15.0% |
| !!! | ATGTATTGTTTTAGATATAT+TGG | + | chr4.3:12807852-12807871 | None:intergenic | 15.0% |
| !!! | TATAATATGTATGTTTTTCA+AGG | - | chr4.3:12805266-12805285 | MS.gene023667:intron | 15.0% |
| !! | AAACTACATAAATTGTTTAC+AGG | + | chr4.3:12807788-12807807 | None:intergenic | 20.0% |
| !! | ATATATATATTACTACCGTA+TGG | - | chr4.3:12806162-12806181 | MS.gene023667:intron | 20.0% |
| !! | CAAATTACATGTTTAAAAAC+AGG | - | chr4.3:12805378-12805397 | MS.gene023667:intron | 20.0% |
| !! | GAAATAATTGAAAAACTAAC+GGG | - | chr4.3:12805963-12805982 | MS.gene023667:intron | 20.0% |
| !! | TAAAAAAATTAGTAGGACAA+TGG | + | chr4.3:12806376-12806395 | None:intergenic | 20.0% |
| !! | TGAATGATATTGAATATTGA+TGG | - | chr4.3:12807343-12807362 | MS.gene023667:intron | 20.0% |
| !! | TTTCAATAGCATATACTATT+AGG | - | chr4.3:12807501-12807520 | MS.gene023667:intron | 20.0% |
| !! | TTTCAATTATTTCAAGACAA+GGG | + | chr4.3:12805956-12805975 | None:intergenic | 20.0% |
| !!! | AAGGATGTTCTTTTATATTT+GGG | - | chr4.3:12806126-12806145 | MS.gene023667:CDS | 20.0% |
| !!! | CTTTCTTTTTAAATTGACAA+TGG | - | chr4.3:12807581-12807600 | MS.gene023667:intron | 20.0% |
| !!! | TAATTTAAAAAAGAGTGTGT+TGG | + | chr4.3:12805124-12805143 | None:intergenic | 20.0% |
| !!! | TTTTCAATTATTTCAAGACA+AGG | + | chr4.3:12805957-12805976 | None:intergenic | 20.0% |
| ! | AAAAGCCTCATAAATTGAAT+TGG | + | chr4.3:12806709-12806728 | None:intergenic | 25.0% |
| ! | AAACATAACATACTTGATAC+AGG | + | chr4.3:12805006-12805025 | None:intergenic | 25.0% |
| ! | AAGAAGATTGAAGGATTTAT+TGG | - | chr4.3:12805523-12805542 | MS.gene023667:intron | 25.0% |
| ! | AAGGAAAAACTAAACCAAAA+TGG | + | chr4.3:12805467-12805486 | None:intergenic | 25.0% |
| ! | AAGTTTCTCCAAAAAGATTA+TGG | - | chr4.3:12807163-12807182 | MS.gene023667:intron | 25.0% |
| ! | AATAAACAAAAAAGGTTGTG+TGG | + | chr4.3:12805622-12805641 | None:intergenic | 25.0% |
| ! | AATATGAGAAGAGCAAAATT+TGG | + | chr4.3:12806891-12806910 | None:intergenic | 25.0% |
| ! | AATCCATTAAAATTTAGGAG+CGG | + | chr4.3:12805156-12805175 | None:intergenic | 25.0% |
| ! | AATTAAACTTAGAACTTGAG+TGG | - | chr4.3:12808235-12808254 | MS.gene023667:CDS | 25.0% |
| ! | ACACAAATACATTCAATCAA+AGG | + | chr4.3:12807240-12807259 | None:intergenic | 25.0% |
| ! | ACCTTTAATAAATTCTGCAA+TGG | - | chr4.3:12808059-12808078 | MS.gene023667:intron | 25.0% |
| ! | ATACATACAAATGTGTATGT+GGG | - | chr4.3:12806001-12806020 | MS.gene023667:intron | 25.0% |
| ! | ATATGAGAAGAGCAAAATTT+GGG | + | chr4.3:12806890-12806909 | None:intergenic | 25.0% |
| ! | ATATTGACATTTATGATTGC+AGG | - | chr4.3:12807069-12807088 | MS.gene023667:intron | 25.0% |
| ! | TTCATATACAAGACATTGTA+AGG | + | chr4.3:12807933-12807952 | None:intergenic | 25.0% |
| ! | TTCTTACTATGAATAGATTG+AGG | - | chr4.3:12806439-12806458 | MS.gene023667:intron | 25.0% |
| ! | TTGTATGCTTAAAATGTTGT+GGG | - | chr4.3:12805827-12805846 | MS.gene023667:CDS | 25.0% |
| ! | TTTGTATGCTTAAAATGTTG+TGG | - | chr4.3:12805826-12805845 | MS.gene023667:CDS | 25.0% |
| !! | AAAGCTATCCATAATCTTTT+TGG | + | chr4.3:12807174-12807193 | None:intergenic | 25.0% |
| !! | AATTTATGAGGCTTTTATTC+CGG | - | chr4.3:12806713-12806732 | MS.gene023667:intron | 25.0% |
| !! | GAAGGATGTTCTTTTATATT+TGG | - | chr4.3:12806125-12806144 | MS.gene023667:CDS | 25.0% |
| !! | GTTTTCATGAGTGATTTTAA+TGG | - | chr4.3:12807315-12807334 | MS.gene023667:intron | 25.0% |
| !!! | ACCTTTTTTGTTTATTGTCA+TGG | - | chr4.3:12805626-12805645 | MS.gene023667:intron | 25.0% |
| !!! | ATTGCACTTTGAAATTCAAA+AGG | - | chr4.3:12806414-12806433 | MS.gene023667:intron | 25.0% |
| !!! | GTATTGGTTAAAATCTTTGT+CGG | - | chr4.3:12805335-12805354 | MS.gene023667:intron | 25.0% |
| !!! | GTCCTACTAATTTTTTTAGA+CGG | - | chr4.3:12806378-12806397 | MS.gene023667:intron | 25.0% |
| !!! | TACAAATTGTGTTGGTTATA+TGG | - | chr4.3:12805309-12805328 | MS.gene023667:intron | 25.0% |
| !!! | TCCTACTAATTTTTTTAGAC+GGG | - | chr4.3:12806379-12806398 | MS.gene023667:intron | 25.0% |
| !!! | TGAATATTGATGGTGAAAAT+AGG | - | chr4.3:12807353-12807372 | MS.gene023667:intron | 25.0% |
| AACAACCAACCATTCTTATA+TGG | - | chr4.3:12806082-12806101 | MS.gene023667:CDS | 30.0% | |
| AACGATTTAAGGAAAAGTAG+TGG | - | chr4.3:12805405-12805424 | MS.gene023667:intron | 30.0% | |
| ACAAAATCTGACAAGGAAAA+AGG | + | chr4.3:12806617-12806636 | None:intergenic | 30.0% | |
| AGCATAGTCAATATCATTGA+TGG | - | chr4.3:12808162-12808181 | MS.gene023667:intron | 30.0% | |
| AGTGCTAAACTTAATGATCT+AGG | - | chr4.3:12806264-12806283 | MS.gene023667:intron | 30.0% | |
| ATAAATTCTGCAATGGCATT+TGG | - | chr4.3:12808066-12808085 | MS.gene023667:intron | 30.0% | |
| ATCTAGTGGTTCAAAGAATA+TGG | - | chr4.3:12807199-12807218 | MS.gene023667:intron | 30.0% | |
| ATCTGCCAATTCAATTTATG+AGG | - | chr4.3:12806701-12806720 | MS.gene023667:intron | 30.0% | |
| ATGATATGCGTATAGGAAAA+TGG | - | chr4.3:12808106-12808125 | MS.gene023667:intron | 30.0% | |
| ATTTAGCAATCAGAGATATG+AGG | - | chr4.3:12807430-12807449 | MS.gene023667:intron | 30.0% | |
| CAGTATGCTAATTCAACTTA+TGG | + | chr4.3:12807266-12807285 | None:intergenic | 30.0% | |
| CATACATACAAATGTGTATG+TGG | - | chr4.3:12806000-12806019 | MS.gene023667:intron | 30.0% | |
| GAAGGAATGGTAGAATTTAT+TGG | - | chr4.3:12807375-12807394 | MS.gene023667:CDS | 30.0% | |
| GAGGATAAATTAGTAGTATG+TGG | + | chr4.3:12806332-12806351 | None:intergenic | 30.0% | |
| GCCATGACAATAAACAAAAA+AGG | + | chr4.3:12805630-12805649 | None:intergenic | 30.0% | |
| GCCATTGCAGAATTTATTAA+AGG | + | chr4.3:12808063-12808082 | None:intergenic | 30.0% | |
| GTGCTAAACTTAATGATCTA+GGG | - | chr4.3:12806265-12806284 | MS.gene023667:intron | 30.0% | |
| TAATAATAGTCCATTGTGCT+TGG | - | chr4.3:12806947-12806966 | MS.gene023667:intron | 30.0% | |
| TAATTTATCCTCCATTCCAT+TGG | - | chr4.3:12806340-12806359 | MS.gene023667:intron | 30.0% | |
| TACAAATGTGACAGATTTCT+TGG | + | chr4.3:12805733-12805752 | None:intergenic | 30.0% | |
| TACAGGTAAAAGAAGATTGA+AGG | - | chr4.3:12805514-12805533 | MS.gene023667:intron | 30.0% | |
| TCCCGTCTAAAAAAATTAGT+AGG | + | chr4.3:12806383-12806402 | None:intergenic | 30.0% | |
| TCTATACATGAATAGAATCG+AGG | - | chr4.3:12806558-12806577 | MS.gene023667:CDS | 30.0% | |
| TGATGAAATAGATGCAATGA+TGG | - | chr4.3:12806662-12806681 | MS.gene023667:intron | 30.0% | |
| TGTAACCTTACCAAACTTAT+TGG | + | chr4.3:12807706-12807725 | None:intergenic | 30.0% | |
| TGTATGCTTAAAATGTTGTG+GGG | - | chr4.3:12805828-12805847 | MS.gene023667:CDS | 30.0% | |
| TGTTGATGTACAAATTGTGT+TGG | - | chr4.3:12805301-12805320 | MS.gene023667:intron | 30.0% | |
| ! | AAATGGAACGTTGATTGAAT+TGG | + | chr4.3:12807034-12807053 | None:intergenic | 30.0% |
| ! | ACTTTTTGTCACTGAAAAGT+AGG | - | chr4.3:12806831-12806850 | MS.gene023667:intron | 30.0% |
| ! | AGTCAATATCATTGATGGTA+AGG | - | chr4.3:12808167-12808186 | MS.gene023667:intron | 30.0% |
| ! | ATGTTTGATGATATGCGTAT+AGG | - | chr4.3:12808099-12808118 | MS.gene023667:intron | 30.0% |
| ! | GGAACTAGATTTTGCATTAT+AGG | + | chr4.3:12807767-12807786 | None:intergenic | 30.0% |
| ! | GTTGGTTATATGGTTTGTAT+TGG | - | chr4.3:12805319-12805338 | MS.gene023667:intron | 30.0% |
| ! | TATCCGCTCCTAAATTTTAA+TGG | - | chr4.3:12805150-12805169 | MS.gene023667:CDS | 30.0% |
| ! | TCAGATTTTGTCTGTAACAT+TGG | - | chr4.3:12806626-12806645 | MS.gene023667:intron | 30.0% |
| ! | TTAATGATCTAGGGTATAAG+AGG | - | chr4.3:12806274-12806293 | MS.gene023667:intron | 30.0% |
| ! | TTTAAAAAAGAGTGTGTTGG+TGG | + | chr4.3:12805121-12805140 | None:intergenic | 30.0% |
| !! | ACAAATGTCTTTGAAGTACT+TGG | - | chr4.3:12805205-12805224 | MS.gene023667:CDS | 30.0% |
| !! | ATTTGATCATGACTTGTTCT+CGG | - | chr4.3:12807999-12808018 | MS.gene023667:intron | 30.0% |
| !! | TATTGATGGTGAAAATAGGA+AGG | - | chr4.3:12807357-12807376 | MS.gene023667:intron | 30.0% |
| !!! | GTCGGAAATAATTTTTTCGA+AGG | - | chr4.3:12805353-12805372 | MS.gene023667:intron | 30.0% |
| !!! | TTTTTTTGAACTGCTTCTTC+AGG | - | chr4.3:12805785-12805804 | MS.gene023667:CDS | 30.0% |
| AAACAGGCATGAACGATTTA+AGG | - | chr4.3:12805394-12805413 | MS.gene023667:intron | 35.0% | |
| AACAATAGACGGTTGGAATT+TGG | - | chr4.3:12804976-12804995 | MS.gene023667:CDS | 35.0% | |
| AACATGCTTCATTGTATTGC+AGG | - | chr4.3:12807972-12807991 | MS.gene023667:intron | 35.0% | |
| AAGAACGTGCAAAATTCATC+AGG | - | chr4.3:12806772-12806791 | MS.gene023667:intron | 35.0% | |
| ACAATAGACGGTTGGAATTT+GGG | - | chr4.3:12804977-12804996 | MS.gene023667:CDS | 35.0% | |
| ACCAATCATTCAACTTCTCA+AGG | + | chr4.3:12805486-12805505 | None:intergenic | 35.0% | |
| ATGCTTGTGCAATAGTTTGA+AGG | - | chr4.3:12806107-12806126 | MS.gene023667:CDS | 35.0% | |
| ATGGTGAAAATAGGAAGGAA+TGG | - | chr4.3:12807362-12807381 | MS.gene023667:CDS | 35.0% | |
| ATTGAAAACAACCAACCTGT+TGG | + | chr4.3:12807488-12807507 | None:intergenic | 35.0% | |
| CAAGCATAGCCATATAAGAA+TGG | + | chr4.3:12806094-12806113 | None:intergenic | 35.0% | |
| CAATGGTTAGTGATTACCAA+TGG | + | chr4.3:12806359-12806378 | None:intergenic | 35.0% | |
| CATAGCCATATAAGAATGGT+TGG | + | chr4.3:12806090-12806109 | None:intergenic | 35.0% | |
| CCAAGCTTCAAAACAACATA+TGG | + | chr4.3:12807465-12807484 | None:intergenic | 35.0% | |
| GAATAAACTTACGCCCATTT+AGG | + | chr4.3:12805593-12805612 | None:intergenic | 35.0% | |
| GATAGCTTTCGAAAATCTAG+TGG | - | chr4.3:12807185-12807204 | MS.gene023667:intron | 35.0% | |
| GCAATTTGGACCAATAAGTT+TGG | - | chr4.3:12807693-12807712 | MS.gene023667:CDS | 35.0% | |
| GGAGTAATTTGAATCCAGTT+TGG | - | chr4.3:12807641-12807660 | MS.gene023667:intron | 35.0% | |
| GTTACAGACAAAATCTGACA+AGG | + | chr4.3:12806624-12806643 | None:intergenic | 35.0% | |
| GTTAGATCGATGGATAAGAT+AGG | - | chr4.3:12806479-12806498 | MS.gene023667:CDS | 35.0% | |
| GTTAGTGATTACCAATGGAA+TGG | + | chr4.3:12806354-12806373 | None:intergenic | 35.0% | |
| GTTCATGGTAGCATAAAAAG+TGG | - | chr4.3:12807006-12807025 | MS.gene023667:intron | 35.0% | |
| TAGGTAGAATGTAAGACAAG+AGG | - | chr4.3:12806498-12806517 | MS.gene023667:CDS | 35.0% | |
| TCCTTGAGAAGTTGAATGAT+TGG | - | chr4.3:12805482-12805501 | MS.gene023667:intron | 35.0% | |
| TCTTGGCACTCATATATCAA+AGG | - | chr4.3:12805861-12805880 | MS.gene023667:intron | 35.0% | |
| TGAGAAGTTGAATGATTGGT+AGG | - | chr4.3:12805486-12805505 | MS.gene023667:intron | 35.0% | |
| TGTAAGTTGTGTTAGATCGA+TGG | - | chr4.3:12806469-12806488 | MS.gene023667:CDS | 35.0% | |
| TGTCTGTAACATTGGATGAA+TGG | - | chr4.3:12806634-12806653 | MS.gene023667:intron | 35.0% | |
| TTAGAGCAACATTACGTATG+AGG | - | chr4.3:12807887-12807906 | MS.gene023667:intron | 35.0% | |
| TTCTCGGCTGATGATATAAT+GGG | - | chr4.3:12808015-12808034 | MS.gene023667:intron | 35.0% | |
| TTCTTCAGGTCAGCAAATAT+TGG | - | chr4.3:12805799-12805818 | MS.gene023667:CDS | 35.0% | |
| TTGGACCAATAAGTTTGGTA+AGG | - | chr4.3:12807698-12807717 | MS.gene023667:CDS | 35.0% | |
| ! | ATAGATGCAATGATGGAAGT+TGG | - | chr4.3:12806669-12806688 | MS.gene023667:intron | 35.0% |
| ! | ATGATTGGTAGGTCTTTTAC+AGG | - | chr4.3:12805497-12805516 | MS.gene023667:intron | 35.0% |
| ! | TGTGACATGAAAAGCCATTT+TGG | - | chr4.3:12805450-12805469 | MS.gene023667:intron | 35.0% |
| !! | TCATGGCCTTTCTAAAACTA+AGG | - | chr4.3:12805643-12805662 | MS.gene023667:intron | 35.0% |
| !!! | CCATATGTTGTTTTGAAGCT+TGG | - | chr4.3:12807462-12807481 | MS.gene023667:intron | 35.0% |
| !!! | CTCAGACCTTAGTTTTAGAA+AGG | + | chr4.3:12805652-12805671 | None:intergenic | 35.0% |
| AGTGATTACCAATGGAATGG+AGG | + | chr4.3:12806351-12806370 | None:intergenic | 40.0% | |
| ATAAGTTCCTCGTTCCAAAC+TGG | + | chr4.3:12807658-12807677 | None:intergenic | 40.0% | |
| ATGCTTCATTGTATTGCAGG+AGG | - | chr4.3:12807975-12807994 | MS.gene023667:intron | 40.0% | |
| ATTCTCCACATTCGACATTC+TGG | + | chr4.3:12808218-12808237 | None:intergenic | 40.0% | |
| CAATGCTTAACCAAGCACAA+TGG | + | chr4.3:12806960-12806979 | None:intergenic | 40.0% | |
| CATACAAATGTGTATGTGGG+TGG | - | chr4.3:12806004-12806023 | MS.gene023667:intron | 40.0% | |
| CTGAAAGTGAAAGTGGTCAA+AGG | - | chr4.3:12807402-12807421 | MS.gene023667:CDS | 40.0% | |
| CTGTTCAGACGACTGTAATA+AGG | - | chr4.3:12807620-12807639 | MS.gene023667:intron | 40.0% | |
| CTTATTGGTCCAAATTGCTG+AGG | + | chr4.3:12807691-12807710 | None:intergenic | 40.0% | |
| GCTGAAGACAAAGATTCATC+TGG | + | chr4.3:12806868-12806887 | None:intergenic | 40.0% | |
| GTTCTCGGCTGATGATATAA+TGG | - | chr4.3:12808014-12808033 | MS.gene023667:intron | 40.0% | |
| TAATGACAACGCGCTTATAG+AGG | - | chr4.3:12808137-12808156 | MS.gene023667:intron | 40.0% | |
| TGGAATGCTGAAAGTGAAAG+TGG | - | chr4.3:12807395-12807414 | MS.gene023667:CDS | 40.0% | |
| ! | ATGATCTAGGGTATAAGAGG+TGG | - | chr4.3:12806277-12806296 | MS.gene023667:intron | 40.0% |
| ! | ATGGCTTTTCATGTCACAAG+TGG | + | chr4.3:12805448-12805467 | None:intergenic | 40.0% |
| ! | TATGAGGCTTTTATTCCGGA+AGG | - | chr4.3:12806717-12806736 | MS.gene023667:intron | 40.0% |
| ! | TTTGAATCCAGTTTGGAACG+AGG | - | chr4.3:12807648-12807667 | MS.gene023667:CDS | 40.0% |
| ! | TTTTGCACGTTCTTCATGAC+TGG | + | chr4.3:12806766-12806785 | None:intergenic | 40.0% |
| !! | TGTAAGACAAGAGGAGTGTT+AGG | - | chr4.3:12806507-12806526 | MS.gene023667:CDS | 40.0% |
| !!! | CCTGGTTTTGTATATCCTTC+CGG | + | chr4.3:12806735-12806754 | None:intergenic | 40.0% |
| AAGCTCCAGAATGTCGAATG+TGG | - | chr4.3:12808210-12808229 | MS.gene023667:intron | 45.0% | |
| ATAGACGGTTGGAATTTGGG+AGG | - | chr4.3:12804980-12804999 | MS.gene023667:CDS | 45.0% | |
| CCGCAATCATGTATGCCATA+CGG | + | chr4.3:12806180-12806199 | None:intergenic | 45.0% | |
| CCGGAAGGATATACAAAACC+AGG | - | chr4.3:12806732-12806751 | MS.gene023667:intron | 45.0% | |
| CCGTATGGCATACATGATTG+CGG | - | chr4.3:12806177-12806196 | MS.gene023667:intron | 45.0% | |
| CGACATTGCGATGTTGTTCA+TGG | - | chr4.3:12806991-12807010 | MS.gene023667:intron | 45.0% | |
| GCAATGGCATTTGGAGATAC+TGG | - | chr4.3:12808075-12808094 | MS.gene023667:intron | 45.0% | |
| GTCGATGAACAATAGACGGT+TGG | - | chr4.3:12804969-12804988 | MS.gene023667:CDS | 45.0% | |
| TAGTGCTCCGGATCCTAAAT+GGG | - | chr4.3:12805577-12805596 | MS.gene023667:CDS | 45.0% | |
| TGGTCCAAATTGCTGAGGAA+CGG | + | chr4.3:12807686-12807705 | None:intergenic | 45.0% | |
| TTGTCCGTTCCTCAGCAATT+TGG | - | chr4.3:12807679-12807698 | MS.gene023667:CDS | 45.0% | |
| ! | ACTTACGCCCATTTAGGATC+CGG | + | chr4.3:12805587-12805606 | None:intergenic | 45.0% |
| ! | GATGCAATGATGGAAGTTGG+AGG | - | chr4.3:12806672-12806691 | MS.gene023667:intron | 45.0% |
| !! | TTGTGCTGATTGTAGTGCTC+CGG | - | chr4.3:12805565-12805584 | MS.gene023667:CDS | 45.0% |
| !!! | TGTTTTGAAGCTTGGCCAAC+AGG | - | chr4.3:12807470-12807489 | MS.gene023667:intron | 45.0% |
| GTAGTGCTCCGGATCCTAAA+TGG | - | chr4.3:12805576-12805595 | MS.gene023667:CDS | 50.0% | |
| TTGAAGCTTGGCCAACAGGT+TGG | - | chr4.3:12807474-12807493 | MS.gene023667:intron | 50.0% | |
| CGTTCTTCATGACTGGCGTC+TGG | + | chr4.3:12806759-12806778 | None:intergenic | 55.0% | |
| TGTGGGGTGCACAGAAGTCT+TGG | - | chr4.3:12805844-12805863 | MS.gene023667:CDS | 55.0% | |
| TCATGACTGGCGTCTGGTCC+TGG | + | chr4.3:12806753-12806772 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 12804967 | 12808275 | 12804967 | ID=MS.gene023667 |
| chr4.3 | mRNA | 12804967 | 12808275 | 12804967 | ID=MS.gene023667.t1;Parent=MS.gene023667 |
| chr4.3 | exon | 12808230 | 12808275 | 12808230 | ID=MS.gene023667.t1.exon1;Parent=MS.gene023667.t1 |
| chr4.3 | CDS | 12808230 | 12808275 | 12808230 | ID=cds.MS.gene023667.t1;Parent=MS.gene023667.t1 |
| chr4.3 | exon | 12807642 | 12807723 | 12807642 | ID=MS.gene023667.t1.exon2;Parent=MS.gene023667.t1 |
| chr4.3 | CDS | 12807642 | 12807723 | 12807642 | ID=cds.MS.gene023667.t1;Parent=MS.gene023667.t1 |
| chr4.3 | exon | 12807360 | 12807435 | 12807360 | ID=MS.gene023667.t1.exon3;Parent=MS.gene023667.t1 |
| chr4.3 | CDS | 12807360 | 12807435 | 12807360 | ID=cds.MS.gene023667.t1;Parent=MS.gene023667.t1 |
| chr4.3 | exon | 12806449 | 12806612 | 12806449 | ID=MS.gene023667.t1.exon4;Parent=MS.gene023667.t1 |
| chr4.3 | CDS | 12806449 | 12806612 | 12806449 | ID=cds.MS.gene023667.t1;Parent=MS.gene023667.t1 |
| chr4.3 | exon | 12806022 | 12806151 | 12806022 | ID=MS.gene023667.t1.exon5;Parent=MS.gene023667.t1 |
| chr4.3 | CDS | 12806022 | 12806151 | 12806022 | ID=cds.MS.gene023667.t1;Parent=MS.gene023667.t1 |
| chr4.3 | exon | 12805751 | 12805867 | 12805751 | ID=MS.gene023667.t1.exon6;Parent=MS.gene023667.t1 |
| chr4.3 | CDS | 12805751 | 12805867 | 12805751 | ID=cds.MS.gene023667.t1;Parent=MS.gene023667.t1 |
| chr4.3 | exon | 12805528 | 12805623 | 12805528 | ID=MS.gene023667.t1.exon7;Parent=MS.gene023667.t1 |
| chr4.3 | CDS | 12805528 | 12805623 | 12805528 | ID=cds.MS.gene023667.t1;Parent=MS.gene023667.t1 |
| chr4.3 | exon | 12804967 | 12805248 | 12804967 | ID=MS.gene023667.t1.exon8;Parent=MS.gene023667.t1 |
| chr4.3 | CDS | 12804967 | 12805248 | 12804967 | ID=cds.MS.gene023667.t1;Parent=MS.gene023667.t1 |
| Gene Sequence |
| Protein sequence |