Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03069.t1 | XP_003594529.1 | 97.8 | 319 | 7 | 0 | 2 | 320 | 11 | 329 | 2.90E-175 | 624.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03069.t1 | Q8LFN9 | 70.7 | 328 | 86 | 2 | 2 | 319 | 8 | 335 | 3.1e-133 | 476.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03069.t1 | G7IKU9 | 97.8 | 319 | 7 | 0 | 2 | 320 | 11 | 329 | 2.1e-175 | 624.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene84339 | MS.gene03069 | PPI |
MS.gene47863 | MS.gene03069 | PPI |
MS.gene039700 | MS.gene03069 | PPI |
MS.gene66767 | MS.gene03069 | PPI |
MS.gene03069 | MS.gene071746 | PPI |
MS.gene43051 | MS.gene03069 | PPI |
MS.gene003302 | MS.gene03069 | PPI |
MS.gene20985 | MS.gene03069 | PPI |
MS.gene85519 | MS.gene03069 | PPI |
MS.gene058821 | MS.gene03069 | PPI |
MS.gene90412 | MS.gene03069 | PPI |
MS.gene21056 | MS.gene03069 | PPI |
MS.gene03069 | MS.gene47863 | PPI |
MS.gene92445 | MS.gene03069 | PPI |
MS.gene005346 | MS.gene03069 | PPI |
MS.gene27907 | MS.gene03069 | PPI |
MS.gene023667 | MS.gene03069 | PPI |
MS.gene90413 | MS.gene03069 | PPI |
MS.gene050322 | MS.gene03069 | PPI |
MS.gene007227 | MS.gene03069 | PPI |
MS.gene056211 | MS.gene03069 | PPI |
MS.gene35396 | MS.gene03069 | PPI |
MS.gene03069 | MS.gene058831 | PPI |
MS.gene65789 | MS.gene03069 | PPI |
MS.gene74542 | MS.gene03069 | PPI |
MS.gene058831 | MS.gene03069 | PPI |
MS.gene03069 | MS.gene023667 | PPI |
MS.gene40748 | MS.gene03069 | PPI |
MS.gene034468 | MS.gene03069 | PPI |
MS.gene02100 | MS.gene03069 | PPI |
MS.gene016627 | MS.gene03069 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03069.t1 | MTR_2g030230 | 97.806 | 319 | 7 | 0 | 2 | 320 | 11 | 329 | 0.0 | 648 |
MS.gene03069.t1 | MTR_8g088320 | 79.193 | 322 | 65 | 2 | 1 | 320 | 1 | 322 | 0.0 | 534 |
MS.gene03069.t1 | MTR_3g017500 | 44.286 | 350 | 157 | 3 | 9 | 320 | 21 | 370 | 1.18e-109 | 323 |
MS.gene03069.t1 | MTR_3g017500 | 44.286 | 350 | 157 | 3 | 9 | 320 | 51 | 400 | 3.83e-109 | 323 |
MS.gene03069.t1 | MTR_8g038400 | 43.966 | 348 | 156 | 2 | 10 | 318 | 18 | 365 | 3.42e-105 | 312 |
MS.gene03069.t1 | MTR_6g069470 | 41.765 | 170 | 98 | 1 | 149 | 318 | 3 | 171 | 6.73e-39 | 135 |
MS.gene03069.t1 | MTR_2g027100 | 47.468 | 158 | 80 | 2 | 159 | 314 | 1 | 157 | 7.01e-39 | 135 |
MS.gene03069.t1 | MTR_3g067585 | 41.875 | 160 | 92 | 1 | 159 | 318 | 1 | 159 | 2.37e-38 | 134 |
MS.gene03069.t1 | MTR_8g107340 | 39.560 | 182 | 102 | 2 | 137 | 318 | 2 | 175 | 6.70e-38 | 133 |
MS.gene03069.t1 | MTR_2g011590 | 38.365 | 159 | 97 | 1 | 160 | 318 | 1 | 158 | 1.12e-35 | 127 |
MS.gene03069.t1 | MTR_1g031650 | 42.405 | 158 | 89 | 2 | 162 | 318 | 5 | 161 | 3.18e-34 | 123 |
MS.gene03069.t1 | MTR_4g084280 | 40.373 | 161 | 93 | 3 | 159 | 318 | 1 | 159 | 1.20e-32 | 119 |
MS.gene03069.t1 | MTR_8g464390 | 48.649 | 111 | 49 | 2 | 9 | 119 | 16 | 118 | 4.60e-28 | 113 |
MS.gene03069.t1 | MTR_2g080950 | 48.649 | 111 | 49 | 2 | 9 | 119 | 16 | 118 | 6.64e-28 | 113 |
MS.gene03069.t1 | MTR_6g080710 | 45.455 | 110 | 59 | 1 | 12 | 121 | 19 | 127 | 3.98e-27 | 107 |
MS.gene03069.t1 | MTR_1g031650 | 40.323 | 124 | 73 | 1 | 195 | 318 | 2 | 124 | 8.42e-22 | 89.7 |
MS.gene03069.t1 | MTR_7g099830 | 48.810 | 84 | 42 | 1 | 10 | 93 | 5 | 87 | 1.27e-21 | 95.1 |
MS.gene03069.t1 | MTR_1g069000 | 48.864 | 88 | 43 | 2 | 10 | 96 | 5 | 91 | 1.57e-21 | 95.1 |
MS.gene03069.t1 | MTR_7g020860 | 39.535 | 129 | 53 | 4 | 21 | 125 | 514 | 641 | 1.28e-19 | 90.1 |
MS.gene03069.t1 | MTR_8g100100 | 39.844 | 128 | 52 | 3 | 21 | 124 | 512 | 638 | 5.52e-19 | 88.2 |
MS.gene03069.t1 | MTR_8g100100 | 39.844 | 128 | 52 | 3 | 21 | 124 | 506 | 632 | 6.38e-19 | 87.8 |
MS.gene03069.t1 | MTR_8g067080 | 40.426 | 94 | 54 | 2 | 1 | 93 | 1 | 93 | 1.47e-18 | 85.9 |
MS.gene03069.t1 | MTR_8g471110 | 40.426 | 94 | 54 | 2 | 1 | 93 | 1 | 93 | 1.47e-18 | 85.9 |
MS.gene03069.t1 | MTR_8g067080 | 40.426 | 94 | 54 | 2 | 1 | 93 | 1 | 93 | 1.51e-18 | 85.9 |
MS.gene03069.t1 | MTR_7g020860 | 40.496 | 121 | 47 | 4 | 21 | 117 | 514 | 633 | 2.27e-18 | 86.3 |
MS.gene03069.t1 | MTR_8g067090 | 35.252 | 139 | 81 | 5 | 12 | 146 | 13 | 146 | 3.64e-18 | 84.7 |
MS.gene03069.t1 | MTR_8g471120 | 35.252 | 139 | 81 | 5 | 12 | 146 | 13 | 146 | 3.64e-18 | 84.7 |
MS.gene03069.t1 | MTR_4g074170 | 37.615 | 109 | 56 | 3 | 21 | 118 | 491 | 598 | 2.84e-16 | 80.1 |
MS.gene03069.t1 | MTR_3g098680 | 40.777 | 103 | 54 | 3 | 21 | 117 | 509 | 610 | 7.20e-16 | 79.0 |
MS.gene03069.t1 | MTR_8g464390 | 48.000 | 75 | 31 | 2 | 45 | 119 | 1 | 67 | 5.80e-13 | 69.3 |
MS.gene03069.t1 | MTR_2g080950 | 48.000 | 75 | 31 | 2 | 45 | 119 | 1 | 67 | 7.72e-13 | 68.9 |
MS.gene03069.t1 | MTR_1g008950 | 36.264 | 91 | 56 | 2 | 164 | 252 | 4 | 94 | 7.25e-12 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03069.t1 | AT4G05330 | 70.517 | 329 | 87 | 2 | 2 | 320 | 8 | 336 | 4.23e-177 | 493 |
MS.gene03069.t1 | AT4G05330 | 70.517 | 329 | 87 | 2 | 2 | 320 | 8 | 336 | 4.23e-177 | 493 |
MS.gene03069.t1 | AT4G21160 | 70.909 | 330 | 85 | 3 | 2 | 320 | 8 | 337 | 5.46e-177 | 493 |
MS.gene03069.t1 | AT4G21160 | 70.909 | 330 | 85 | 3 | 2 | 320 | 8 | 337 | 5.46e-177 | 493 |
MS.gene03069.t1 | AT4G21160 | 70.909 | 330 | 85 | 3 | 2 | 320 | 8 | 337 | 5.46e-177 | 493 |
MS.gene03069.t1 | AT4G21160 | 70.909 | 330 | 85 | 3 | 2 | 320 | 8 | 337 | 5.46e-177 | 493 |
MS.gene03069.t1 | AT4G05330 | 71.044 | 297 | 76 | 2 | 34 | 320 | 5 | 301 | 4.98e-157 | 441 |
MS.gene03069.t1 | AT3G07940 | 47.478 | 337 | 150 | 2 | 9 | 318 | 47 | 383 | 3.01e-110 | 325 |
MS.gene03069.t1 | AT3G07940 | 45.794 | 214 | 89 | 2 | 9 | 195 | 47 | 260 | 8.82e-61 | 195 |
MS.gene03069.t1 | AT1G73580 | 43.558 | 163 | 91 | 1 | 156 | 318 | 1 | 162 | 4.58e-38 | 133 |
MS.gene03069.t1 | AT3G17980 | 41.250 | 160 | 93 | 1 | 159 | 318 | 13 | 171 | 1.08e-35 | 127 |
MS.gene03069.t1 | AT5G37740 | 41.718 | 163 | 91 | 2 | 159 | 318 | 1 | 162 | 1.23e-35 | 127 |
MS.gene03069.t1 | AT5G47710 | 44.025 | 159 | 88 | 1 | 159 | 316 | 1 | 159 | 2.83e-35 | 126 |
MS.gene03069.t1 | AT5G47710 | 44.025 | 159 | 88 | 1 | 159 | 316 | 1 | 159 | 2.83e-35 | 126 |
MS.gene03069.t1 | AT5G47710 | 44.025 | 159 | 88 | 1 | 159 | 316 | 1 | 159 | 2.83e-35 | 126 |
MS.gene03069.t1 | AT5G47710 | 44.025 | 159 | 88 | 1 | 159 | 316 | 1 | 159 | 2.83e-35 | 126 |
MS.gene03069.t1 | AT1G70790 | 41.558 | 154 | 89 | 1 | 163 | 315 | 6 | 159 | 5.01e-35 | 126 |
MS.gene03069.t1 | AT1G70790 | 41.558 | 154 | 89 | 1 | 163 | 315 | 6 | 159 | 5.01e-35 | 126 |
MS.gene03069.t1 | AT1G70790 | 41.558 | 154 | 89 | 1 | 163 | 315 | 6 | 159 | 5.01e-35 | 126 |
MS.gene03069.t1 | AT2G01540 | 40.260 | 154 | 91 | 1 | 163 | 315 | 6 | 159 | 4.73e-34 | 123 |
MS.gene03069.t1 | AT1G70800 | 38.994 | 159 | 96 | 1 | 159 | 317 | 10 | 167 | 7.09e-34 | 122 |
MS.gene03069.t1 | AT1G70810 | 38.750 | 160 | 97 | 1 | 159 | 318 | 1 | 159 | 1.31e-33 | 121 |
MS.gene03069.t1 | AT1G66360 | 42.236 | 161 | 92 | 1 | 159 | 318 | 1 | 161 | 3.40e-33 | 120 |
MS.gene03069.t1 | AT1G48590 | 39.375 | 160 | 96 | 1 | 159 | 318 | 6 | 164 | 1.06e-32 | 119 |
MS.gene03069.t1 | AT1G48590 | 39.375 | 160 | 96 | 1 | 159 | 318 | 6 | 164 | 1.06e-32 | 119 |
MS.gene03069.t1 | AT5G37740 | 39.766 | 171 | 89 | 3 | 159 | 316 | 1 | 170 | 1.57e-32 | 119 |
MS.gene03069.t1 | AT1G48590 | 39.375 | 160 | 96 | 1 | 159 | 318 | 37 | 195 | 1.60e-32 | 120 |
MS.gene03069.t1 | AT1G23140 | 36.025 | 161 | 100 | 2 | 159 | 318 | 1 | 159 | 9.55e-31 | 114 |
MS.gene03069.t1 | AT3G17660 | 43.478 | 115 | 57 | 2 | 12 | 126 | 19 | 125 | 8.54e-30 | 112 |
MS.gene03069.t1 | AT3G17660 | 43.478 | 115 | 57 | 2 | 12 | 126 | 19 | 125 | 2.53e-29 | 112 |
MS.gene03069.t1 | AT3G17660 | 43.478 | 115 | 57 | 2 | 12 | 126 | 19 | 125 | 5.15e-29 | 112 |
MS.gene03069.t1 | AT5G54310 | 46.552 | 116 | 54 | 2 | 9 | 124 | 16 | 123 | 1.46e-28 | 115 |
MS.gene03069.t1 | AT1G70790 | 39.167 | 120 | 72 | 1 | 197 | 315 | 3 | 122 | 1.36e-21 | 89.7 |
MS.gene03069.t1 | AT5G46750 | 33.529 | 170 | 104 | 3 | 12 | 174 | 13 | 180 | 2.41e-21 | 94.0 |
MS.gene03069.t1 | AT2G35210 | 47.561 | 82 | 42 | 1 | 12 | 93 | 13 | 93 | 9.52e-21 | 92.0 |
MS.gene03069.t1 | AT2G37550 | 47.619 | 84 | 43 | 1 | 10 | 93 | 5 | 87 | 1.15e-20 | 92.4 |
MS.gene03069.t1 | AT2G37550 | 47.619 | 84 | 43 | 1 | 10 | 93 | 5 | 87 | 1.15e-20 | 92.4 |
MS.gene03069.t1 | AT2G35210 | 47.561 | 82 | 42 | 1 | 12 | 93 | 13 | 93 | 1.62e-20 | 91.7 |
MS.gene03069.t1 | AT3G53710 | 47.619 | 84 | 43 | 1 | 10 | 93 | 5 | 87 | 2.41e-20 | 91.7 |
MS.gene03069.t1 | AT3G53710 | 47.619 | 84 | 43 | 1 | 10 | 93 | 5 | 87 | 2.41e-20 | 91.7 |
MS.gene03069.t1 | AT3G53710 | 47.619 | 84 | 43 | 1 | 10 | 93 | 5 | 87 | 2.41e-20 | 91.7 |
MS.gene03069.t1 | AT3G17660 | 36.522 | 115 | 55 | 2 | 12 | 126 | 19 | 115 | 3.02e-20 | 87.8 |
MS.gene03069.t1 | AT1G48590 | 31.875 | 160 | 76 | 2 | 159 | 318 | 37 | 163 | 2.48e-19 | 84.0 |
MS.gene03069.t1 | AT1G10870 | 37.226 | 137 | 64 | 5 | 21 | 141 | 479 | 609 | 1.94e-18 | 86.7 |
MS.gene03069.t1 | AT1G10870 | 37.324 | 142 | 62 | 6 | 21 | 141 | 479 | 614 | 4.75e-18 | 85.5 |
MS.gene03069.t1 | AT1G60860 | 35.135 | 148 | 74 | 5 | 21 | 152 | 479 | 620 | 5.44e-18 | 85.1 |
MS.gene03069.t1 | AT1G60860 | 33.784 | 148 | 76 | 4 | 21 | 152 | 308 | 449 | 6.30e-18 | 84.7 |
MS.gene03069.t1 | AT1G60860 | 35.135 | 148 | 74 | 5 | 21 | 152 | 368 | 509 | 6.64e-18 | 84.7 |
MS.gene03069.t1 | AT5G13300 | 36.719 | 128 | 59 | 4 | 21 | 127 | 513 | 639 | 1.36e-17 | 84.0 |
MS.gene03069.t1 | AT4G17890 | 38.614 | 101 | 57 | 3 | 12 | 111 | 16 | 112 | 2.20e-17 | 82.8 |
MS.gene03069.t1 | AT4G17890 | 38.614 | 101 | 57 | 3 | 12 | 111 | 16 | 112 | 2.89e-17 | 82.0 |
MS.gene03069.t1 | AT5G61980 | 50.685 | 73 | 33 | 2 | 21 | 91 | 510 | 581 | 4.48e-17 | 82.4 |
MS.gene03069.t1 | AT3G17660 | 39.024 | 82 | 42 | 2 | 45 | 126 | 1 | 74 | 3.94e-13 | 67.4 |
Find 63 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTAATGCTCCAGATCCTAAA+TGG | 0.282409 | 2.1:+60995287 | MS.gene03069:CDS |
AAAACTATCCATAAAACTAT+TGG | 0.306608 | 2.1:-60997326 | None:intergenic |
CTGTCTGTTCCCGAGCATTA+TGG | 0.309294 | 2.1:+60997917 | MS.gene03069:CDS |
CCAAGGTTCAAAACAACATA+TGG | 0.331048 | 2.1:-60997724 | None:intergenic |
ATAACATCTGCCGTGGCATT+TGG | 0.336417 | 2.1:+60998825 | MS.gene03069:CDS |
GCGATATGCAGATTGGAAAA+TGG | 0.338095 | 2.1:+60998865 | MS.gene03069:CDS |
TTCATGACTGGCATCTGGTC+CGG | 0.338789 | 2.1:-60996968 | None:intergenic |
TTGAAGGTGAAAGTGATTAA+AGG | 0.342926 | 2.1:+60997664 | MS.gene03069:CDS |
TTTCTCCAGATTCAACGTTC+TGG | 0.348169 | 2.1:-60998974 | None:intergenic |
GCATTATGGACAGCTGAAAT+TGG | 0.358039 | 2.1:+60997931 | MS.gene03069:CDS |
AAGCTCCAGAACGTTGAATC+TGG | 0.361863 | 2.1:+60998969 | MS.gene03069:CDS |
AACAGCGTGCAAAGTTTATA+CGG | 0.372315 | 2.1:+60996989 | MS.gene03069:CDS |
TTCTGCTAATTCAATTTATG+AGG | 0.373554 | 2.1:+60996918 | MS.gene03069:CDS |
TACTCCTTATTACACTTGTC+TGG | 0.389046 | 2.1:-60997862 | None:intergenic |
ATATGTTCCTCATTCCATAC+TGG | 0.390037 | 2.1:-60997893 | None:intergenic |
GGAGTAATTTGAACCCAGTA+TGG | 0.396162 | 2.1:+60997879 | MS.gene03069:CDS |
TTTGGAGATGCTGGAATGTT+TGG | 0.396363 | 2.1:+60998843 | MS.gene03069:CDS |
CTGTCCAGACAAGTGTAATA+AGG | 0.398855 | 2.1:+60997858 | MS.gene03069:CDS |
TGTCTGTGACATTGGATGAT+TGG | 0.409560 | 2.1:+60996851 | MS.gene03069:CDS |
TCATGACTGGCATCTGGTCC+GGG | 0.418845 | 2.1:-60996967 | None:intergenic |
GAAGGATAATCGTGTTTGTT+CGG | 0.419454 | 2.1:+60995261 | MS.gene03069:CDS |
AAATAGAGTTAGAACTTGAA+TGG | 0.423211 | 2.1:+60998994 | MS.gene03069:CDS |
CCGGACACAATGCGCAAACT+AGG | 0.441935 | 2.1:-60997280 | None:intergenic |
CTTTGCACGCTGTTCATGAC+TGG | 0.443600 | 2.1:-60996980 | None:intergenic |
CCTAGTTTGCGCATTGTGTC+CGG | 0.444096 | 2.1:+60997280 | MS.gene03069:CDS |
CGCTGTTCATGACTGGCATC+TGG | 0.450797 | 2.1:-60996973 | None:intergenic |
ACCTACGCCCATTTAGGATC+TGG | 0.455132 | 2.1:-60995295 | None:intergenic |
GAAGGTATGGTAGAATTCAT+TGG | 0.456937 | 2.1:+60997637 | MS.gene03069:CDS |
AGTGCAGTCAAAATTATTGA+TGG | 0.458587 | 2.1:+60998921 | MS.gene03069:CDS |
TAGATGCAATGATAGAAGTC+GGG | 0.461894 | 2.1:+60996887 | MS.gene03069:CDS |
AAGCACTAATTCAGAGAGAA+TGG | 0.486677 | 2.1:+60997351 | MS.gene03069:CDS |
GCCGTGGCATTTGGAGATGC+TGG | 0.487446 | 2.1:+60998834 | MS.gene03069:CDS |
ATGTTTGGCGATATGCAGAT+TGG | 0.526001 | 2.1:+60998858 | MS.gene03069:CDS |
TGAGAAGTTGAATGATTGGA+AGG | 0.527316 | 2.1:+60995197 | None:intergenic |
TTCAGCTGTCCATAATGCTC+GGG | 0.527559 | 2.1:-60997926 | None:intergenic |
TATGTTCCTCATTCCATACT+GGG | 0.528978 | 2.1:-60997892 | None:intergenic |
TTTATATGCTTAAAATGTTG+TGG | 0.530855 | 2.1:+60995522 | MS.gene03069:CDS |
AAGGCACAGATTTAGCCGTC+CGG | 0.531193 | 2.1:+60997683 | MS.gene03069:CDS |
TGACGACAATGCACTTATTG+AGG | 0.532022 | 2.1:+60998896 | MS.gene03069:CDS |
GAAAGATTTATTGCATCAGA+AGG | 0.532083 | 2.1:+60995243 | MS.gene03069:CDS |
TAATGCTCCAGATCCTAAAT+GGG | 0.532391 | 2.1:+60995288 | MS.gene03069:CDS |
AGGCACAGATTTAGCCGTCC+GGG | 0.537870 | 2.1:+60997684 | MS.gene03069:CDS |
TTTCAGCTGTCCATAATGCT+CGG | 0.540605 | 2.1:-60997927 | None:intergenic |
AGAATTCATTGGAATGTTGA+AGG | 0.546017 | 2.1:+60997648 | MS.gene03069:CDS |
TATGAGGCTTATATTCCTGA+AGG | 0.550636 | 2.1:+60996934 | MS.gene03069:CDS |
GTTGTGACAACAGGAAGGTA+TGG | 0.551570 | 2.1:+60997624 | MS.gene03069:intron |
GTAGATGCAATGATAGAAGT+CGG | 0.565326 | 2.1:+60996886 | MS.gene03069:CDS |
CAAGGTTCAAAACAACATAT+GGG | 0.571327 | 2.1:-60997723 | None:intergenic |
GCATATAAACACCCCAATGT+TGG | 0.573030 | 2.1:-60995508 | None:intergenic |
CCTGAAGGATATACAAAACC+CGG | 0.576297 | 2.1:+60996949 | MS.gene03069:CDS |
TGTGGTGTGCACAGAAGCCT+TGG | 0.582627 | 2.1:+60995540 | MS.gene03069:CDS |
AGCAACCAACCTGTGTGCCA+AGG | 0.586064 | 2.1:-60997741 | None:intergenic |
TGATGATATAATGGGAGAAG+CGG | 0.594684 | 2.1:+60998782 | MS.gene03069:CDS |
CCTTGGTACTCATATATCAA+AGG | 0.598849 | 2.1:+60995557 | MS.gene03069:CDS |
TCCAGCATCTCCAAATGCCA+CGG | 0.612018 | 2.1:-60998835 | None:intergenic |
GGTCACTTGACTTTATATCC+CGG | 0.614173 | 2.1:-60997702 | None:intergenic |
TTTGAACCCAGTATGGAATG+AGG | 0.619584 | 2.1:+60997886 | MS.gene03069:CDS |
AGATGCAATGATAGAAGTCG+GGG | 0.621145 | 2.1:+60996888 | MS.gene03069:CDS |
TTTCAGGTCTGCCAACATTG+GGG | 0.624782 | 2.1:+60995497 | MS.gene03069:intron |
GTCACTGATAACATCTGCCG+TGG | 0.637761 | 2.1:+60998818 | MS.gene03069:CDS |
ACTTGACTTTATATCCCGGA+CGG | 0.645865 | 2.1:-60997698 | None:intergenic |
CCTTTGATATATGAGTACCA+AGG | 0.688448 | 2.1:-60995557 | None:intergenic |
GATGCAATGATAGAAGTCGG+GGG | 0.750201 | 2.1:+60996889 | MS.gene03069:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAGTTTTCATTTTTATTA+TGG | - | chr2.1:60995600-60995619 | None:intergenic | 10.0% |
!! | ATGAAAACAAAAATTGAAAT+TGG | + | chr2.1:60998494-60998513 | MS.gene03069:intron | 15.0% |
!! | TAAAAATGAAAACTATTTAC+TGG | + | chr2.1:60995603-60995622 | MS.gene03069:intron | 15.0% |
!! | TTTATTATGGTACATATTAA+TGG | - | chr2.1:60995587-60995606 | None:intergenic | 15.0% |
!! | AAAACTATCCATAAAACTAT+TGG | - | chr2.1:60997329-60997348 | None:intergenic | 20.0% |
!! | AAAAGAACAAATATACAACA+AGG | - | chr2.1:60998614-60998633 | None:intergenic | 20.0% |
!! | AAAAGATGCATACAAAAATT+TGG | - | chr2.1:60997435-60997454 | None:intergenic | 20.0% |
!! | AATGAAAAAATTAACAGTCT+AGG | - | chr2.1:60996493-60996512 | None:intergenic | 20.0% |
!! | ATAAAAATTTCTGATTAGAG+TGG | - | chr2.1:60995664-60995683 | None:intergenic | 20.0% |
!! | ATCCTAATACAAACAAAAAT+AGG | - | chr2.1:60996755-60996774 | None:intergenic | 20.0% |
!! | CCAAATAGTAAAAAGTTAAA+AGG | - | chr2.1:60996631-60996650 | None:intergenic | 20.0% |
!! | GAAAAATCATAACTTTGATT+CGG | + | chr2.1:60997819-60997838 | MS.gene03069:intron | 20.0% |
!! | TAATTGTATGCTAAACTTTA+AGG | - | chr2.1:60996532-60996551 | None:intergenic | 20.0% |
!! | TTAAAATGGTAGTTAACTAA+AGG | - | chr2.1:60997208-60997227 | None:intergenic | 20.0% |
!! | TTAAATAACCACGATTAAAA+TGG | - | chr2.1:60997222-60997241 | None:intergenic | 20.0% |
!! | TTATAAACACAACTAAAATG+AGG | - | chr2.1:60996258-60996277 | None:intergenic | 20.0% |
!! | TTGTGGTTTATATAAATATG+TGG | + | chr2.1:60995342-60995361 | MS.gene03069:intron | 20.0% |
!! | TTTATATGCTTAAAATGTTG+TGG | + | chr2.1:60995522-60995541 | MS.gene03069:CDS | 20.0% |
!!! | AAAAGAAGATATTTGATTTC+TGG | + | chr2.1:60998685-60998704 | MS.gene03069:intron | 20.0% |
!!! | AAAGATATAAGATTTTCAAG+AGG | - | chr2.1:60997069-60997088 | None:intergenic | 20.0% |
!!! | AAATTTGTTGAAGACAAAAA+TGG | - | chr2.1:60995731-60995750 | None:intergenic | 20.0% |
!!! | AATTTTTGTATGCATCTTTT+TGG | + | chr2.1:60997435-60997454 | MS.gene03069:intron | 20.0% |
!!! | ATTTTTGTATGCATCTTTTT+GGG | + | chr2.1:60997436-60997455 | MS.gene03069:intron | 20.0% |
!!! | CAGATTTTATGTTAATTTTC+AGG | + | chr2.1:60995481-60995500 | MS.gene03069:intron | 20.0% |
!!! | CCTTTTAACTTTTTACTATT+TGG | + | chr2.1:60996628-60996647 | MS.gene03069:intron | 20.0% |
!!! | TGTTTTGTATCCTATAATAA+TGG | + | chr2.1:60997995-60998014 | MS.gene03069:intron | 20.0% |
! | AAATAGAGTTAGAACTTGAA+TGG | + | chr2.1:60998994-60999013 | MS.gene03069:CDS | 25.0% |
! | ACAAACAGTATTTGATATCT+AGG | + | chr2.1:60998278-60998297 | MS.gene03069:intron | 25.0% |
! | AGTGAACAAAGAATAAAAAG+AGG | - | chr2.1:60998390-60998409 | None:intergenic | 25.0% |
! | ATTTCTCACAATAAACTTGT+AGG | - | chr2.1:60997489-60997508 | None:intergenic | 25.0% |
! | TCAAATACTGTTTGTATACT+TGG | - | chr2.1:60998273-60998292 | None:intergenic | 25.0% |
! | TGGATGCTTAATATATTCTT+TGG | + | chr2.1:60998556-60998575 | MS.gene03069:intron | 25.0% |
! | TTCTGCTAATTCAATTTATG+AGG | + | chr2.1:60996918-60996937 | MS.gene03069:CDS | 25.0% |
!! | CAAAAATAGGTCACATTTTA+TGG | - | chr2.1:60996742-60996761 | None:intergenic | 25.0% |
!! | CACTGACTAAAGATAAAATT+GGG | - | chr2.1:60998414-60998433 | None:intergenic | 25.0% |
!! | CATCTTTATTTGATTTCCAA+TGG | - | chr2.1:60998167-60998186 | None:intergenic | 25.0% |
!! | CTTAATATATTCTTTGGAGA+TGG | + | chr2.1:60998562-60998581 | MS.gene03069:intron | 25.0% |
!! | CTTTGTTTATGTGTGTATTT+GGG | + | chr2.1:60998643-60998662 | MS.gene03069:intron | 25.0% |
!! | TCACTGACTAAAGATAAAAT+TGG | - | chr2.1:60998415-60998434 | None:intergenic | 25.0% |
!! | TGCATTTCTTACAAAAGTTT+TGG | - | chr2.1:60995794-60995813 | None:intergenic | 25.0% |
!! | TTGATTGATAACTCATGTTT+CGG | + | chr2.1:60995757-60995776 | MS.gene03069:intron | 25.0% |
!! | TTTTCTGCTGATGATATAAT+GGG | + | chr2.1:60998774-60998793 | MS.gene03069:CDS | 25.0% |
!! | TTTTTCTGCTGATGATATAA+TGG | + | chr2.1:60998773-60998792 | MS.gene03069:CDS | 25.0% |
!!! | AAGTTCTTCCAATAGTTTTA+TGG | + | chr2.1:60997318-60997337 | MS.gene03069:CDS | 25.0% |
!!! | AATTTTAGTTGTATTCATCG+AGG | + | chr2.1:60996276-60996295 | MS.gene03069:intron | 25.0% |
!!! | AGGTAACTTTTAATTGGATT+AGG | - | chr2.1:60998109-60998128 | None:intergenic | 25.0% |
!!! | AGTTATTTTCCTATAGCTTA+AGG | - | chr2.1:60995409-60995428 | None:intergenic | 25.0% |
!!! | CAGCATTATTTTTTACTTAC+AGG | + | chr2.1:60996825-60996844 | MS.gene03069:intron | 25.0% |
!!! | GACCTATTTTTGTTTGTATT+AGG | + | chr2.1:60996750-60996769 | MS.gene03069:intron | 25.0% |
!!! | GTTATTTTCCTATAGCTTAA+GGG | - | chr2.1:60995408-60995427 | None:intergenic | 25.0% |
!!! | TATATTAGCTTTTTCCGTAA+GGG | + | chr2.1:60998340-60998359 | MS.gene03069:intron | 25.0% |
!!! | TGATTTGATTTGAGATAAAC+AGG | - | chr2.1:60998438-60998457 | None:intergenic | 25.0% |
!!! | TTATATTAGCTTTTTCCGTA+AGG | + | chr2.1:60998339-60998358 | MS.gene03069:intron | 25.0% |
AACCAATTACGAACTGTATT+TGG | - | chr2.1:60998194-60998213 | None:intergenic | 30.0% | |
AATACACACATAAACAAAGG+AGG | - | chr2.1:60998642-60998661 | None:intergenic | 30.0% | |
AATTACGAACTGTATTTGGA+AGG | - | chr2.1:60998190-60998209 | None:intergenic | 30.0% | |
AGAATTCATTGGAATGTTGA+AGG | + | chr2.1:60997648-60997667 | MS.gene03069:CDS | 30.0% | |
AGTGCAGTCAAAATTATTGA+TGG | + | chr2.1:60998921-60998940 | MS.gene03069:CDS | 30.0% | |
ATACACACATAAACAAAGGA+GGG | - | chr2.1:60998641-60998660 | None:intergenic | 30.0% | |
ATCATGGTGTCCATTATTAT+AGG | - | chr2.1:60998008-60998027 | None:intergenic | 30.0% | |
ATTAAAGTTCACCCAAGAAA+AGG | - | chr2.1:60995378-60995397 | None:intergenic | 30.0% | |
CAAAGAATAAAAAGAGGAAG+AGG | - | chr2.1:60998384-60998403 | None:intergenic | 30.0% | |
CAACACTTAATCTTATCAAC+TGG | + | chr2.1:60998718-60998737 | MS.gene03069:intron | 30.0% | |
CAAGGTTCAAAACAACATAT+GGG | - | chr2.1:60997726-60997745 | None:intergenic | 30.0% | |
CCAAATACACACATAAACAA+AGG | - | chr2.1:60998645-60998664 | None:intergenic | 30.0% | |
GAAAGATTTATTGCATCAGA+AGG | + | chr2.1:60995243-60995262 | MS.gene03069:CDS | 30.0% | |
GATTGAAAGACAAACATGTT+TGG | - | chr2.1:60995866-60995885 | None:intergenic | 30.0% | |
GTAACATGCAAATATTAGCT+TGG | - | chr2.1:60996557-60996576 | None:intergenic | 30.0% | |
TAAACACTAGTACACTACAT+AGG | - | chr2.1:60996102-60996121 | None:intergenic | 30.0% | |
TACTAGTGTTTATAAAGCCT+GGG | + | chr2.1:60996110-60996129 | MS.gene03069:intron | 30.0% | |
TATCTTGCAAGAAATGTAAC+TGG | - | chr2.1:60998086-60998105 | None:intergenic | 30.0% | |
TTAAACTCTCAGTTCTTAGT+AGG | + | chr2.1:60996225-60996244 | MS.gene03069:intron | 30.0% | |
TTCCAAATACAGTTCGTAAT+TGG | + | chr2.1:60998189-60998208 | MS.gene03069:intron | 30.0% | |
TTCTTGCCATATATTTCCTT+GGG | + | chr2.1:60997765-60997784 | MS.gene03069:intron | 30.0% | |
TTGAAGGTGAAAGTGATTAA+AGG | + | chr2.1:60997664-60997683 | MS.gene03069:CDS | 30.0% | |
TTGGTGTAATAGGAAAAACA+AGG | - | chr2.1:60996707-60996726 | None:intergenic | 30.0% | |
TTTCTTGCCATATATTTCCT+TGG | + | chr2.1:60997764-60997783 | MS.gene03069:intron | 30.0% | |
! | CCTTTGTTTATGTGTGTATT+TGG | + | chr2.1:60998642-60998661 | MS.gene03069:intron | 30.0% |
! | CTGAGAAGGTAACTTTTAAT+TGG | - | chr2.1:60998115-60998134 | None:intergenic | 30.0% |
! | CTTTCGTTAGTGATTTTGTT+GGG | + | chr2.1:60997586-60997605 | MS.gene03069:intron | 30.0% |
! | GTTCTCATTTTGTGTACTTA+AGG | + | chr2.1:60996444-60996463 | MS.gene03069:intron | 30.0% |
!! | AACTCATTTTTCTGCAATCA+TGG | - | chr2.1:60998024-60998043 | None:intergenic | 30.0% |
!! | GATAGTTCATTAGTTTGTGT+TGG | + | chr2.1:60995944-60995963 | MS.gene03069:intron | 30.0% |
!! | GTTAACTACCATTTTAATCG+TGG | + | chr2.1:60997211-60997230 | MS.gene03069:intron | 30.0% |
!! | TCGGTTTTGTAAGTTTAGTT+AGG | + | chr2.1:60996151-60996170 | MS.gene03069:intron | 30.0% |
!!! | ACTTGATAGATTGCTTTTTC+CGG | - | chr2.1:60997302-60997321 | None:intergenic | 30.0% |
AACAGCGTGCAAAGTTTATA+CGG | + | chr2.1:60996989-60997008 | MS.gene03069:CDS | 35.0% | |
AACCTAATACTGCAATTAGG+TGG | - | chr2.1:60996000-60996019 | None:intergenic | 35.0% | |
AAGCACTAATTCAGAGAGAA+TGG | + | chr2.1:60997351-60997370 | MS.gene03069:CDS | 35.0% | |
AATGCCAACCTCTTAGAATT+TGG | - | chr2.1:60996183-60996202 | None:intergenic | 35.0% | |
AATTGCTTGATACCAAGATC+AGG | - | chr2.1:60998321-60998340 | None:intergenic | 35.0% | |
ACCAGAATGAACTAGGATTA+GGG | + | chr2.1:60996575-60996594 | MS.gene03069:intron | 35.0% | |
ACCCAAGAAAAGGATGAAAA+TGG | - | chr2.1:60995368-60995387 | None:intergenic | 35.0% | |
ATATGTTCCTCATTCCATAC+TGG | - | chr2.1:60997896-60997915 | None:intergenic | 35.0% | |
ATCGTGGTTATTTAAACTGC+AGG | + | chr2.1:60997227-60997246 | MS.gene03069:intron | 35.0% | |
ATGCCAACCTCTTAGAATTT+GGG | - | chr2.1:60996182-60996201 | None:intergenic | 35.0% | |
ATGTTGAGAAATGAGGATGA+AGG | - | chr2.1:60998047-60998066 | None:intergenic | 35.0% | |
CAACATCATGTTGGTGTAAT+AGG | - | chr2.1:60996717-60996736 | None:intergenic | 35.0% | |
CAGTTTCCCAAGGAAATATA+TGG | - | chr2.1:60997774-60997793 | None:intergenic | 35.0% | |
CCAAGGTTCAAAACAACATA+TGG | - | chr2.1:60997727-60997746 | None:intergenic | 35.0% | |
CCTTGGTACTCATATATCAA+AGG | + | chr2.1:60995557-60995576 | MS.gene03069:CDS | 35.0% | |
CCTTTGATATATGAGTACCA+AGG | - | chr2.1:60995560-60995579 | None:intergenic | 35.0% | |
CTATTACACCAACATGATGT+TGG | + | chr2.1:60996715-60996734 | MS.gene03069:intron | 35.0% | |
CTGATATTAGTTGTGACAAC+AGG | + | chr2.1:60997615-60997634 | MS.gene03069:intron | 35.0% | |
CTTCATCATTGTCTACTTCA+TGG | - | chr2.1:60997097-60997116 | None:intergenic | 35.0% | |
GAAGAGTGAATGAATGAAAC+AGG | - | chr2.1:60996609-60996628 | None:intergenic | 35.0% | |
GAAGGATAATCGTGTTTGTT+CGG | + | chr2.1:60995261-60995280 | MS.gene03069:CDS | 35.0% | |
GAGTTTGAACTCAATGACTT+TGG | - | chr2.1:60996345-60996364 | None:intergenic | 35.0% | |
GTACTAGTGTTTATAAAGCC+TGG | + | chr2.1:60996109-60996128 | MS.gene03069:intron | 35.0% | |
GTAGATGCAATGATAGAAGT+CGG | + | chr2.1:60996886-60996905 | MS.gene03069:CDS | 35.0% | |
TAAACTTGTAGGCTTTCATC+TGG | - | chr2.1:60997478-60997497 | None:intergenic | 35.0% | |
TAATGCTCCAGATCCTAAAT+GGG | + | chr2.1:60995288-60995307 | MS.gene03069:CDS | 35.0% | |
TACCAGAATGAACTAGGATT+AGG | + | chr2.1:60996574-60996593 | MS.gene03069:intron | 35.0% | |
TACTCCTTATTACACTTGTC+TGG | - | chr2.1:60997865-60997884 | None:intergenic | 35.0% | |
TAGATGCAATGATAGAAGTC+GGG | + | chr2.1:60996887-60996906 | MS.gene03069:CDS | 35.0% | |
TATGAGGCTTATATTCCTGA+AGG | + | chr2.1:60996934-60996953 | MS.gene03069:CDS | 35.0% | |
TATGTTCCTCATTCCATACT+GGG | - | chr2.1:60997895-60997914 | None:intergenic | 35.0% | |
TATTAGTTGTGACAACAGGA+AGG | + | chr2.1:60997619-60997638 | MS.gene03069:intron | 35.0% | |
TGAAATCGGTTACATACTGA+TGG | + | chr2.1:60998536-60998555 | MS.gene03069:intron | 35.0% | |
TGAATATGCCCTTAAGCTAT+AGG | + | chr2.1:60995397-60995416 | MS.gene03069:intron | 35.0% | |
TTTATGGTCCAACATCATGT+TGG | - | chr2.1:60996726-60996745 | None:intergenic | 35.0% | |
! | AACCTCTTAGAATTTGGGTT+GGG | - | chr2.1:60996177-60996196 | None:intergenic | 35.0% |
! | ATGATTGGAAGGTCTTTTAC+AGG | + | chr2.1:60995208-60995227 | MS.gene03069:CDS | 35.0% |
! | ATTCTTTGGAGATGGATGTT+TGG | + | chr2.1:60998570-60998589 | MS.gene03069:intron | 35.0% |
! | GAAGGTATGGTAGAATTCAT+TGG | + | chr2.1:60997637-60997656 | MS.gene03069:CDS | 35.0% |
! | GCTTTCGTTAGTGATTTTGT+TGG | + | chr2.1:60997585-60997604 | MS.gene03069:intron | 35.0% |
! | GTATGTAACCGATTTCAAGA+TGG | - | chr2.1:60998533-60998552 | None:intergenic | 35.0% |
! | TGATGATATAATGGGAGAAG+CGG | + | chr2.1:60998782-60998801 | MS.gene03069:CDS | 35.0% |
!! | ACTTACAAAACCGACTTGTA+AGG | - | chr2.1:60996145-60996164 | None:intergenic | 35.0% |
!! | ATAACTTTGATTCGGTGCTA+TGG | + | chr2.1:60997827-60997846 | MS.gene03069:intron | 35.0% |
!! | GAAATGTAACTGGCTTTACA+AGG | - | chr2.1:60998076-60998095 | None:intergenic | 35.0% |
!! | GCCATTTTCATCCTTTTCTT+GGG | + | chr2.1:60995364-60995383 | MS.gene03069:intron | 35.0% |
!! | TTTCTGATTAGAGTGGACTA+AGG | - | chr2.1:60995657-60995676 | None:intergenic | 35.0% |
!!! | CCATATGTTGTTTTGAACCT+TGG | + | chr2.1:60997724-60997743 | MS.gene03069:CDS | 35.0% |
!!! | TACTGGTTTTCTCATTGTTG+TGG | + | chr2.1:60995620-60995639 | MS.gene03069:intron | 35.0% |
AAGAAATGCATCGCGTGATA+TGG | + | chr2.1:60995804-60995823 | MS.gene03069:intron | 40.0% | |
AAGCTGAGTGACAAATGACA+TGG | - | chr2.1:60996417-60996436 | None:intergenic | 40.0% | |
ACCACAAAAATCATGAGTGC+AGG | - | chr2.1:60995329-60995348 | None:intergenic | 40.0% | |
ACCCTAATCCTAGTTCATTC+TGG | - | chr2.1:60996579-60996598 | None:intergenic | 40.0% | |
ACTTGACTTTATATCCCGGA+CGG | - | chr2.1:60997701-60997720 | None:intergenic | 40.0% | |
AGATGCAATGATAGAAGTCG+GGG | + | chr2.1:60996888-60996907 | MS.gene03069:CDS | 40.0% | |
AGCCACCTAATTGCAGTATT+AGG | + | chr2.1:60995995-60996014 | MS.gene03069:intron | 40.0% | |
ATGTTTGGCGATATGCAGAT+TGG | + | chr2.1:60998858-60998877 | MS.gene03069:CDS | 40.0% | |
CAAAAATCATGAGTGCAGGA+AGG | - | chr2.1:60995325-60995344 | None:intergenic | 40.0% | |
CAACCTCTTAGAATTTGGGT+TGG | - | chr2.1:60996178-60996197 | None:intergenic | 40.0% | |
CATTCTGCTGTTCTTTCAAC+TGG | + | chr2.1:60997172-60997191 | MS.gene03069:intron | 40.0% | |
CCTGAAGGATATACAAAACC+CGG | + | chr2.1:60996949-60996968 | MS.gene03069:CDS | 40.0% | |
CTGTCCAGACAAGTGTAATA+AGG | + | chr2.1:60997858-60997877 | MS.gene03069:CDS | 40.0% | |
GCATATAAACACCCCAATGT+TGG | - | chr2.1:60995511-60995530 | None:intergenic | 40.0% | |
GCATGTTACCAGAATGAACT+AGG | + | chr2.1:60996568-60996587 | MS.gene03069:intron | 40.0% | |
GCATTATGGACAGCTGAAAT+TGG | + | chr2.1:60997931-60997950 | MS.gene03069:CDS | 40.0% | |
GCGATATGCAGATTGGAAAA+TGG | + | chr2.1:60998865-60998884 | MS.gene03069:CDS | 40.0% | |
GGAGTAATTTGAACCCAGTA+TGG | + | chr2.1:60997879-60997898 | MS.gene03069:CDS | 40.0% | |
GGCAACCTAATACTGCAATT+AGG | - | chr2.1:60996003-60996022 | None:intergenic | 40.0% | |
GGTCACTTGACTTTATATCC+CGG | - | chr2.1:60997705-60997724 | None:intergenic | 40.0% | |
GTAATGCTCCAGATCCTAAA+TGG | + | chr2.1:60995287-60995306 | MS.gene03069:CDS | 40.0% | |
GTGTCAGATGTTGAGAAATG+AGG | - | chr2.1:60998054-60998073 | None:intergenic | 40.0% | |
TAAAAAGCAGCAGTTTCCCA+AGG | - | chr2.1:60997784-60997803 | None:intergenic | 40.0% | |
TAACACCCTAGGTCTAAAGA+AGG | + | chr2.1:60996302-60996321 | MS.gene03069:intron | 40.0% | |
TCATTGTGTTGGGTGCAAAA+GGG | + | chr2.1:60996045-60996064 | MS.gene03069:intron | 40.0% | |
TCCAACACCTTCATTGTGTT+GGG | + | chr2.1:60996035-60996054 | MS.gene03069:intron | 40.0% | |
TGACGACAATGCACTTATTG+AGG | + | chr2.1:60998896-60998915 | MS.gene03069:CDS | 40.0% | |
TGATTTCCAATGGCGAGAAT+GGG | - | chr2.1:60998157-60998176 | None:intergenic | 40.0% | |
TGCTTCCTTCTTTAGACCTA+GGG | - | chr2.1:60996310-60996329 | None:intergenic | 40.0% | |
TGTCTGTGACATTGGATGAT+TGG | + | chr2.1:60996851-60996870 | MS.gene03069:CDS | 40.0% | |
TTCATTGTGTTGGGTGCAAA+AGG | + | chr2.1:60996044-60996063 | MS.gene03069:intron | 40.0% | |
TTGATTTCCAATGGCGAGAA+TGG | - | chr2.1:60998158-60998177 | None:intergenic | 40.0% | |
TTGCTTCCTTCTTTAGACCT+AGG | - | chr2.1:60996311-60996330 | None:intergenic | 40.0% | |
TTTCAGCTGTCCATAATGCT+CGG | - | chr2.1:60997930-60997949 | None:intergenic | 40.0% | |
TTTCTCCAGATTCAACGTTC+TGG | - | chr2.1:60998977-60998996 | None:intergenic | 40.0% | |
TTTGAACCCAGTATGGAATG+AGG | + | chr2.1:60997886-60997905 | MS.gene03069:CDS | 40.0% | |
TTTGGAGATGCTGGAATGTT+TGG | + | chr2.1:60998843-60998862 | MS.gene03069:CDS | 40.0% | |
! | CAACCCAAATTCTAAGAGGT+TGG | + | chr2.1:60996176-60996195 | MS.gene03069:intron | 40.0% |
! | TCCTGCACTCATGATTTTTG+TGG | + | chr2.1:60995325-60995344 | MS.gene03069:intron | 40.0% |
! | TTTTGCACCCAACACAATGA+AGG | - | chr2.1:60996045-60996064 | None:intergenic | 40.0% |
!! | ACAGGTTTTGTCTGTGACAT+TGG | + | chr2.1:60996843-60996862 | MS.gene03069:intron | 40.0% |
!! | GGATGTGTCTATCAAGTTGA+TGG | + | chr2.1:60996771-60996790 | MS.gene03069:intron | 40.0% |
!! | GGCCATTTTCATCCTTTTCT+TGG | + | chr2.1:60995363-60995382 | MS.gene03069:intron | 40.0% |
!! | TCCTCTAGTTCTATCCCTTA+CGG | - | chr2.1:60998357-60998376 | None:intergenic | 40.0% |
!!! | ATTTTCAGGTCTGCCAACAT+TGG | + | chr2.1:60995495-60995514 | MS.gene03069:intron | 40.0% |
!!! | TTTTCAGGTCTGCCAACATT+GGG | + | chr2.1:60995496-60995515 | MS.gene03069:intron | 40.0% |
AAATGCATCGCGTGATATGG+AGG | + | chr2.1:60995807-60995826 | MS.gene03069:intron | 45.0% | |
AAGCTCCAGAACGTTGAATC+TGG | + | chr2.1:60998969-60998988 | MS.gene03069:CDS | 45.0% | |
ATAACATCTGCCGTGGCATT+TGG | + | chr2.1:60998825-60998844 | MS.gene03069:CDS | 45.0% | |
CACTACATAGGCCTATCTCT+AGG | - | chr2.1:60996090-60996109 | None:intergenic | 45.0% | |
CTCCAACACCTTCATTGTGT+TGG | + | chr2.1:60996034-60996053 | MS.gene03069:intron | 45.0% | |
CTGTGTAAGAGAAGCTGAGA+AGG | - | chr2.1:60998129-60998148 | None:intergenic | 45.0% | |
GATGCAATGATAGAAGTCGG+GGG | + | chr2.1:60996889-60996908 | MS.gene03069:CDS | 45.0% | |
GCTTGATACCAAGATCAGGA+GGG | - | chr2.1:60998317-60998336 | None:intergenic | 45.0% | |
GGAAAAACCTACGCCCATTT+AGG | - | chr2.1:60995304-60995323 | None:intergenic | 45.0% | |
GTTGTGACAACAGGAAGGTA+TGG | + | chr2.1:60997624-60997643 | MS.gene03069:intron | 45.0% | |
TCCGTAAGGGATAGAACTAG+AGG | + | chr2.1:60998353-60998372 | MS.gene03069:intron | 45.0% | |
TGCAATTAGGTGGCTAGAGA+CGG | - | chr2.1:60995990-60996009 | None:intergenic | 45.0% | |
TGCTGCTGCCATCTTGAAAT+CGG | + | chr2.1:60998522-60998541 | MS.gene03069:intron | 45.0% | |
TGCTTGATACCAAGATCAGG+AGG | - | chr2.1:60998318-60998337 | None:intergenic | 45.0% | |
TTCAGCTGTCCATAATGCTC+GGG | - | chr2.1:60997929-60997948 | None:intergenic | 45.0% | |
! | ACCCAACACAATGAAGGTGT+TGG | - | chr2.1:60996039-60996058 | None:intergenic | 45.0% |
! | TTTCAGGTCTGCCAACATTG+GGG | + | chr2.1:60995497-60995516 | MS.gene03069:intron | 45.0% |
!! | CAACACAATGAAGGTGTTGG+AGG | - | chr2.1:60996036-60996055 | None:intergenic | 45.0% |
!! | CATCGAGGTTTTAACACCCT+AGG | + | chr2.1:60996291-60996310 | MS.gene03069:intron | 45.0% |
!! | CCGGGTTTTGTATATCCTTC+AGG | - | chr2.1:60996952-60996971 | None:intergenic | 45.0% |
!! | TGTTTTGAACCTTGGCACAC+AGG | + | chr2.1:60997732-60997751 | MS.gene03069:CDS | 45.0% |
AAGGCACAGATTTAGCCGTC+CGG | + | chr2.1:60997683-60997702 | MS.gene03069:CDS | 50.0% | |
CAAGATCAGGAGGGTAAGTG+AGG | - | chr2.1:60998308-60998327 | None:intergenic | 50.0% | |
CTCACTTACCCTCCTGATCT+TGG | + | chr2.1:60998306-60998325 | MS.gene03069:intron | 50.0% | |
CTGTCTGTTCCCGAGCATTA+TGG | + | chr2.1:60997917-60997936 | MS.gene03069:CDS | 50.0% | |
CTTTGCACGCTGTTCATGAC+TGG | - | chr2.1:60996983-60997002 | None:intergenic | 50.0% | |
GCAGCTCTCACCTTACAAGT+CGG | + | chr2.1:60996132-60996151 | MS.gene03069:intron | 50.0% | |
GGCCCAACCCAAATTCTAAG+AGG | + | chr2.1:60996172-60996191 | MS.gene03069:intron | 50.0% | |
GTCACTGATAACATCTGCCG+TGG | + | chr2.1:60998818-60998837 | MS.gene03069:CDS | 50.0% | |
GTTACACCCATTCTCGCCAT+TGG | + | chr2.1:60998148-60998167 | MS.gene03069:intron | 50.0% | |
TCCAGATCCTAAATGGGCGT+AGG | + | chr2.1:60995294-60995313 | MS.gene03069:intron | 50.0% | |
TCCAGCATCTCCAAATGCCA+CGG | - | chr2.1:60998838-60998857 | None:intergenic | 50.0% | |
TTCATGACTGGCATCTGGTC+CGG | - | chr2.1:60996971-60996990 | None:intergenic | 50.0% | |
TTGAACCTTGGCACACAGGT+TGG | + | chr2.1:60997736-60997755 | MS.gene03069:intron | 50.0% | |
TTGTGTTGGGTGCAAAAGGG+TGG | + | chr2.1:60996048-60996067 | MS.gene03069:intron | 50.0% | |
! | ACCTACGCCCATTTAGGATC+TGG | - | chr2.1:60995298-60995317 | None:intergenic | 50.0% |
! | CCTAGTTTGCGCATTGTGTC+CGG | + | chr2.1:60997280-60997299 | MS.gene03069:CDS | 50.0% |
! | GGTGTTGGAGGCTGCAATAA+AGG | - | chr2.1:60996024-60996043 | None:intergenic | 50.0% |
AGAGACGGACGCAATGAAGG+CGG | - | chr2.1:60995975-60995994 | None:intergenic | 55.0% | |
AGCAACCAACCTGTGTGCCA+AGG | - | chr2.1:60997744-60997763 | None:intergenic | 55.0% | |
AGGCACAGATTTAGCCGTCC+GGG | + | chr2.1:60997684-60997703 | MS.gene03069:CDS | 55.0% | |
AGGCCTATCTCTAGGCAGTG+TGG | - | chr2.1:60996082-60996101 | None:intergenic | 55.0% | |
CCGGACACAATGCGCAAACT+AGG | - | chr2.1:60997283-60997302 | None:intergenic | 55.0% | |
CGCTGTTCATGACTGGCATC+TGG | - | chr2.1:60996976-60996995 | None:intergenic | 55.0% | |
GCTAGAGACGGACGCAATGA+AGG | - | chr2.1:60995978-60995997 | None:intergenic | 55.0% | |
GGCCTATCTCTAGGCAGTGT+GGG | - | chr2.1:60996081-60996100 | None:intergenic | 55.0% | |
GTCCCACACTGCCTAGAGAT+AGG | + | chr2.1:60996076-60996095 | MS.gene03069:intron | 55.0% | |
TCATGACTGGCATCTGGTCC+GGG | - | chr2.1:60996970-60996989 | None:intergenic | 55.0% | |
TGTGGTGTGCACAGAAGCCT+TGG | + | chr2.1:60995540-60995559 | MS.gene03069:CDS | 55.0% | |
TTGTAAGGTGAGAGCTGCCC+AGG | - | chr2.1:60996130-60996149 | None:intergenic | 55.0% | |
AGCGCCAGAGAGCAAGAGAG+GGG | - | chr2.1:60997133-60997152 | None:intergenic | 60.0% | |
CAGCGCCAGAGAGCAAGAGA+GGG | - | chr2.1:60997134-60997153 | None:intergenic | 60.0% | |
GAGACGGACGCAATGAAGGC+GGG | - | chr2.1:60995974-60995993 | None:intergenic | 60.0% | |
GCCGTGGCATTTGGAGATGC+TGG | + | chr2.1:60998834-60998853 | MS.gene03069:CDS | 60.0% | |
TCAGCGCCAGAGAGCAAGAG+AGG | - | chr2.1:60997135-60997154 | None:intergenic | 60.0% | |
CCAGAGAGCAAGAGAGGGGG+AGG | - | chr2.1:60997129-60997148 | None:intergenic | 65.0% | |
CCTCCCCCTCTCTTGCTCTC+TGG | + | chr2.1:60997126-60997145 | MS.gene03069:intron | 65.0% | |
GCGCCAGAGAGCAAGAGAGG+GGG | - | chr2.1:60997132-60997151 | None:intergenic | 65.0% | |
CGCGCGCGCGCGCGTTAAAT+AGG | + | chr2.1:60996667-60996686 | MS.gene03069:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 60995208 | 60999034 | 60995208 | ID=MS.gene03069 |
chr2.1 | mRNA | 60995208 | 60999034 | 60995208 | ID=MS.gene03069.t1;Parent=MS.gene03069 |
chr2.1 | exon | 60995208 | 60995311 | 60995208 | ID=MS.gene03069.t1.exon1;Parent=MS.gene03069.t1 |
chr2.1 | CDS | 60995208 | 60995311 | 60995208 | ID=cds.MS.gene03069.t1;Parent=MS.gene03069.t1 |
chr2.1 | exon | 60995503 | 60995578 | 60995503 | ID=MS.gene03069.t1.exon2;Parent=MS.gene03069.t1 |
chr2.1 | CDS | 60995503 | 60995578 | 60995503 | ID=cds.MS.gene03069.t1;Parent=MS.gene03069.t1 |
chr2.1 | exon | 60996847 | 60997010 | 60996847 | ID=MS.gene03069.t1.exon3;Parent=MS.gene03069.t1 |
chr2.1 | CDS | 60996847 | 60997010 | 60996847 | ID=cds.MS.gene03069.t1;Parent=MS.gene03069.t1 |
chr2.1 | exon | 60997249 | 60997372 | 60997249 | ID=MS.gene03069.t1.exon4;Parent=MS.gene03069.t1 |
chr2.1 | CDS | 60997249 | 60997372 | 60997249 | ID=cds.MS.gene03069.t1;Parent=MS.gene03069.t1 |
chr2.1 | exon | 60997637 | 60997753 | 60997637 | ID=MS.gene03069.t1.exon5;Parent=MS.gene03069.t1 |
chr2.1 | CDS | 60997637 | 60997753 | 60997637 | ID=cds.MS.gene03069.t1;Parent=MS.gene03069.t1 |
chr2.1 | exon | 60997857 | 60997952 | 60997857 | ID=MS.gene03069.t1.exon6;Parent=MS.gene03069.t1 |
chr2.1 | CDS | 60997857 | 60997952 | 60997857 | ID=cds.MS.gene03069.t1;Parent=MS.gene03069.t1 |
chr2.1 | exon | 60998753 | 60999034 | 60998753 | ID=MS.gene03069.t1.exon7;Parent=MS.gene03069.t1 |
chr2.1 | CDS | 60998753 | 60999034 | 60998753 | ID=cds.MS.gene03069.t1;Parent=MS.gene03069.t1 |
Gene Sequence |
Protein sequence |