AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74542

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74542.t1 MTR_2g030230 99.088 329 3 0 1 329 1 329 0.0 675
MS.gene74542.t1 MTR_8g088320 78.193 321 68 2 11 329 2 322 0.0 527
MS.gene74542.t1 MTR_3g017500 44.286 350 157 3 18 329 21 370 1.95e-109 323
MS.gene74542.t1 MTR_3g017500 44.286 350 157 3 18 329 51 400 5.74e-109 323
MS.gene74542.t1 MTR_8g038400 43.966 348 156 2 19 327 18 365 4.73e-105 312
MS.gene74542.t1 MTR_6g069470 41.765 170 98 1 158 327 3 171 8.86e-39 135
MS.gene74542.t1 MTR_2g027100 47.468 158 80 2 168 323 1 157 1.08e-38 135
MS.gene74542.t1 MTR_3g067585 41.875 160 92 1 168 327 1 159 2.99e-38 134
MS.gene74542.t1 MTR_8g107340 39.560 182 102 2 146 327 2 175 8.34e-38 133
MS.gene74542.t1 MTR_2g011590 38.854 157 95 1 171 327 3 158 1.58e-35 127
MS.gene74542.t1 MTR_1g031650 42.405 158 89 2 171 327 5 161 4.07e-34 123
MS.gene74542.t1 MTR_4g084280 40.373 161 93 3 168 327 1 159 1.63e-32 119
MS.gene74542.t1 MTR_8g464390 48.246 114 51 2 15 128 13 118 2.84e-28 114
MS.gene74542.t1 MTR_2g080950 48.246 114 51 2 15 128 13 118 4.19e-28 114
MS.gene74542.t1 MTR_6g080710 45.455 110 59 1 21 130 19 127 3.83e-27 107
MS.gene74542.t1 MTR_1g031650 40.323 124 73 1 204 327 2 124 1.12e-21 89.4
MS.gene74542.t1 MTR_7g099830 48.810 84 42 1 19 102 5 87 1.44e-21 95.1
MS.gene74542.t1 MTR_1g069000 48.864 88 43 2 19 105 5 91 1.52e-21 95.1
MS.gene74542.t1 MTR_7g020860 39.535 129 53 4 30 134 514 641 1.21e-19 90.1
MS.gene74542.t1 MTR_8g100100 39.844 128 52 3 30 133 512 638 5.71e-19 88.2
MS.gene74542.t1 MTR_8g100100 39.844 128 52 3 30 133 506 632 6.48e-19 88.2
MS.gene74542.t1 MTR_7g020860 40.496 121 47 4 30 126 514 633 2.35e-18 86.3
MS.gene74542.t1 MTR_8g067090 35.252 139 81 5 21 155 13 146 2.97e-18 85.1
MS.gene74542.t1 MTR_8g471120 35.252 139 81 5 21 155 13 146 2.97e-18 85.1
MS.gene74542.t1 MTR_8g067080 41.463 82 47 1 21 102 13 93 4.64e-18 84.7
MS.gene74542.t1 MTR_8g471110 41.463 82 47 1 21 102 13 93 4.64e-18 84.7
MS.gene74542.t1 MTR_8g067080 41.463 82 47 1 21 102 13 93 4.72e-18 84.7
MS.gene74542.t1 MTR_4g074170 37.615 109 56 3 30 127 491 598 3.38e-16 79.7
MS.gene74542.t1 MTR_3g098680 40.777 103 54 3 30 126 509 610 8.70e-16 78.6
MS.gene74542.t1 MTR_8g464390 48.000 75 31 2 54 128 1 67 6.00e-13 69.7
MS.gene74542.t1 MTR_2g080950 48.000 75 31 2 54 128 1 67 7.15e-13 69.3
MS.gene74542.t1 MTR_1g008950 36.264 91 56 2 173 261 4 94 7.11e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74542.t1 AT4G05330 70.238 336 90 2 4 329 1 336 6.85e-180 501
MS.gene74542.t1 AT4G05330 70.238 336 90 2 4 329 1 336 6.85e-180 501
MS.gene74542.t1 AT4G21160 71.818 330 82 3 11 329 8 337 2.03e-179 499
MS.gene74542.t1 AT4G21160 71.818 330 82 3 11 329 8 337 2.03e-179 499
MS.gene74542.t1 AT4G21160 71.818 330 82 3 11 329 8 337 2.03e-179 499
MS.gene74542.t1 AT4G21160 71.818 330 82 3 11 329 8 337 2.03e-179 499
MS.gene74542.t1 AT4G05330 71.044 297 76 2 43 329 5 301 6.38e-157 441
MS.gene74542.t1 AT3G07940 47.478 337 150 2 18 327 47 383 3.79e-110 326
MS.gene74542.t1 AT3G07940 45.794 214 89 2 18 204 47 260 7.64e-61 196
MS.gene74542.t1 AT1G73580 43.558 163 91 1 165 327 1 162 6.20e-38 133
MS.gene74542.t1 AT3G17980 41.250 160 93 1 168 327 13 171 1.25e-35 127
MS.gene74542.t1 AT5G37740 42.236 161 89 2 168 325 1 160 1.53e-35 127
MS.gene74542.t1 AT5G47710 44.025 159 88 1 168 325 1 159 3.49e-35 126
MS.gene74542.t1 AT5G47710 44.025 159 88 1 168 325 1 159 3.49e-35 126
MS.gene74542.t1 AT5G47710 44.025 159 88 1 168 325 1 159 3.49e-35 126
MS.gene74542.t1 AT5G47710 44.025 159 88 1 168 325 1 159 3.49e-35 126
MS.gene74542.t1 AT1G70790 41.558 154 89 1 172 324 6 159 7.87e-35 125
MS.gene74542.t1 AT1G70790 41.558 154 89 1 172 324 6 159 7.87e-35 125
MS.gene74542.t1 AT1G70790 41.558 154 89 1 172 324 6 159 7.87e-35 125
MS.gene74542.t1 AT2G01540 40.260 154 91 1 172 324 6 159 6.19e-34 123
MS.gene74542.t1 AT1G70800 41.212 165 84 3 168 326 10 167 9.06e-34 122
MS.gene74542.t1 AT1G70810 38.750 160 97 1 168 327 1 159 1.92e-33 121
MS.gene74542.t1 AT1G66360 42.236 161 92 1 168 327 1 161 3.62e-33 121
MS.gene74542.t1 AT1G48590 39.375 160 96 1 168 327 6 164 1.35e-32 119
MS.gene74542.t1 AT1G48590 39.375 160 96 1 168 327 6 164 1.35e-32 119
MS.gene74542.t1 AT5G37740 39.766 171 89 3 168 325 1 170 2.10e-32 119
MS.gene74542.t1 AT1G48590 39.375 160 96 1 168 327 37 195 2.12e-32 120
MS.gene74542.t1 AT1G23140 35.000 160 103 1 168 327 1 159 1.29e-30 114
MS.gene74542.t1 AT3G17660 43.478 115 57 2 21 135 19 125 8.16e-30 112
MS.gene74542.t1 AT3G17660 43.478 115 57 2 21 135 19 125 2.63e-29 112
MS.gene74542.t1 AT3G17660 43.478 115 57 2 21 135 19 125 5.95e-29 112
MS.gene74542.t1 AT5G54310 46.218 119 56 2 15 133 13 123 1.13e-28 115
MS.gene74542.t1 AT1G70790 39.167 120 72 1 206 324 3 122 1.89e-21 89.4
MS.gene74542.t1 AT5G46750 33.529 170 104 3 21 183 13 180 2.73e-21 94.0
MS.gene74542.t1 AT2G35210 47.561 82 42 1 21 102 13 93 8.06e-21 92.4
MS.gene74542.t1 AT2G37550 47.619 84 43 1 19 102 5 87 1.19e-20 92.4
MS.gene74542.t1 AT2G37550 47.619 84 43 1 19 102 5 87 1.19e-20 92.4
MS.gene74542.t1 AT2G35210 47.561 82 42 1 21 102 13 93 1.30e-20 92.0
MS.gene74542.t1 AT3G53710 47.619 84 43 1 19 102 5 87 2.37e-20 91.7
MS.gene74542.t1 AT3G53710 47.619 84 43 1 19 102 5 87 2.37e-20 91.7
MS.gene74542.t1 AT3G53710 47.619 84 43 1 19 102 5 87 2.37e-20 91.7
MS.gene74542.t1 AT3G17660 36.522 115 55 2 21 135 19 115 2.70e-20 88.2
MS.gene74542.t1 AT1G48590 31.875 160 76 2 168 327 37 163 3.07e-19 84.0
MS.gene74542.t1 AT1G10870 37.226 137 64 5 30 150 479 609 2.57e-18 86.3
MS.gene74542.t1 AT1G10870 37.324 142 62 6 30 150 479 614 5.55e-18 85.5
MS.gene74542.t1 AT1G60860 35.135 148 74 5 30 161 479 620 7.11e-18 85.1
MS.gene74542.t1 AT1G60860 35.135 148 74 5 30 161 368 509 7.32e-18 84.7
MS.gene74542.t1 AT1G60860 33.784 148 76 4 30 161 308 449 8.26e-18 84.7
MS.gene74542.t1 AT5G13300 36.719 128 59 4 30 136 513 639 1.44e-17 84.0
MS.gene74542.t1 AT4G17890 38.614 101 57 3 21 120 16 112 1.90e-17 82.8
MS.gene74542.t1 AT4G17890 38.614 101 57 3 21 120 16 112 2.20e-17 82.4
MS.gene74542.t1 AT5G61980 50.685 73 33 2 30 100 510 581 5.50e-17 82.4
MS.gene74542.t1 AT3G17660 39.024 82 42 2 54 135 1 74 3.82e-13 67.8

Find 69 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAATGCTCCAGATCCTAAA+TGG 0.282409 2.3:+59565948 MS.gene74542:CDS
AAAACTATCCATAAAACTAT+TGG 0.306608 2.3:-59567987 None:intergenic
CTGTCTGTTCCCGAGCATTA+TGG 0.309294 2.3:+59568578 MS.gene74542:CDS
CCAAGGTTCAAAACAACATA+TGG 0.331048 2.3:-59568385 None:intergenic
ATAACATCTGCCGTGGCATT+TGG 0.336417 2.3:+59569486 MS.gene74542:CDS
GCGATATGCAGATTGGAAAA+TGG 0.338095 2.3:+59569526 MS.gene74542:CDS
TTCATGACTGGCATCTGGTC+CGG 0.338789 2.3:-59567629 None:intergenic
TTGAAGGTGAAAGTGATTAA+AGG 0.342926 2.3:+59568325 MS.gene74542:CDS
TTTCTCCAGATTCAACGTTC+TGG 0.348169 2.3:-59569635 None:intergenic
GCATTATGGACAGCTGAAAT+TGG 0.358039 2.3:+59568592 MS.gene74542:CDS
AAGCTCCAGAACGTTGAATC+TGG 0.361863 2.3:+59569630 MS.gene74542:CDS
AACAGCGTGCAAAGTTTATA+CGG 0.372315 2.3:+59567650 MS.gene74542:CDS
TTCTGCTAATTCAATTTATG+AGG 0.373554 2.3:+59567579 MS.gene74542:CDS
TACTCCTTATTACACTTGTC+TGG 0.389046 2.3:-59568523 None:intergenic
ATATGTTCCTCATTCCATAC+TGG 0.390037 2.3:-59568554 None:intergenic
GGAGTAATTTGAACCCAGTA+TGG 0.396162 2.3:+59568540 MS.gene74542:CDS
TTTGGAGATGCTGGAATGTT+TGG 0.396363 2.3:+59569504 MS.gene74542:CDS
CTGTCCAGACAAGTGTAATA+AGG 0.398855 2.3:+59568519 MS.gene74542:CDS
AATAATCTTCGAATGGATCT+TGG 0.407035 2.3:+59564722 MS.gene74542:CDS
TGTCTGTGACATTGGATGAT+TGG 0.409560 2.3:+59567512 MS.gene74542:CDS
TCATGACTGGCATCTGGTCC+GGG 0.418845 2.3:-59567628 None:intergenic
GAAGGATAATCGTGTTTGTT+CGG 0.419454 2.3:+59565922 MS.gene74542:CDS
AAATAGAGTTAGAACTTGAA+TGG 0.423211 2.3:+59569655 MS.gene74542:CDS
CCGGACACAATGCGCAAACT+AGG 0.441935 2.3:-59567941 None:intergenic
CTTTGCACGCTGTTCATGAC+TGG 0.443600 2.3:-59567641 None:intergenic
CCTAGTTTGCGCATTGTGTC+CGG 0.444096 2.3:+59567941 MS.gene74542:CDS
CGCTGTTCATGACTGGCATC+TGG 0.450797 2.3:-59567634 None:intergenic
ACCTACGCCCATTTAGGATC+TGG 0.455132 2.3:-59565956 None:intergenic
GAAGGTATGGTAGAATTCAT+TGG 0.456937 2.3:+59568298 MS.gene74542:CDS
AGTGCAGTCAAAATTATTGA+TGG 0.458587 2.3:+59569582 MS.gene74542:CDS
TAGATGCAATGATAGAAGTC+GGG 0.461894 2.3:+59567548 MS.gene74542:CDS
AAGCACTAATTCAGAGAGAA+TGG 0.486677 2.3:+59568012 MS.gene74542:CDS
GCCGTGGCATTTGGAGATGC+TGG 0.487446 2.3:+59569495 MS.gene74542:CDS
GATCTTGGAAGGCCCGCCTC+AGG 0.508056 2.3:+59564737 MS.gene74542:CDS
ATGTTTGGCGATATGCAGAT+TGG 0.526001 2.3:+59569519 MS.gene74542:CDS
TTCAGCTGTCCATAATGCTC+GGG 0.527559 2.3:-59568587 None:intergenic
TATGTTCCTCATTCCATACT+GGG 0.528978 2.3:-59568553 None:intergenic
TTTATATGCTTAAAATGTTG+TGG 0.530855 2.3:+59566183 MS.gene74542:CDS
AAGGCACAGATTTAGCCGTC+CGG 0.531193 2.3:+59568344 MS.gene74542:CDS
TGACGACAATGCACTTATTG+AGG 0.532022 2.3:+59569557 MS.gene74542:CDS
GAAAGATTTATTGCATCAGA+AGG 0.532083 2.3:+59565904 MS.gene74542:CDS
TAATGCTCCAGATCCTAAAT+GGG 0.532391 2.3:+59565949 MS.gene74542:CDS
AGGCACAGATTTAGCCGTCC+GGG 0.537870 2.3:+59568345 MS.gene74542:CDS
TTTCAGCTGTCCATAATGCT+CGG 0.540605 2.3:-59568588 None:intergenic
AGAATTCATTGGAATGTTGA+AGG 0.546017 2.3:+59568309 MS.gene74542:CDS
TATGAGGCTTATATTCCTGA+AGG 0.550636 2.3:+59567595 MS.gene74542:CDS
GTTGTGACAACAGGAAGGTA+TGG 0.551570 2.3:+59568285 MS.gene74542:intron
GTAGATGCAATGATAGAAGT+CGG 0.565326 2.3:+59567547 MS.gene74542:CDS
ATCAGTCAATAATCTTCGAA+TGG 0.568153 2.3:+59564715 MS.gene74542:CDS
CAAGGTTCAAAACAACATAT+GGG 0.571327 2.3:-59568384 None:intergenic
GCATATAAACACCCCAATGT+TGG 0.573030 2.3:-59566169 None:intergenic
CCTGAAGGATATACAAAACC+CGG 0.576297 2.3:+59567610 MS.gene74542:CDS
TGTGGTGTGCACAGAAGCCT+TGG 0.582627 2.3:+59566201 MS.gene74542:CDS
AGCAACCAACCTGTGTGCCA+AGG 0.586064 2.3:-59568402 None:intergenic
GCATGTCGGATACCTGAGGC+GGG 0.591056 2.3:-59564749 None:intergenic
TGATGATATAATGGGAGAAG+CGG 0.594684 2.3:+59569443 MS.gene74542:CDS
TGCATGTCGGATACCTGAGG+CGG 0.597809 2.3:-59564750 None:intergenic
CCTTGGTACTCATATATCAA+AGG 0.598849 2.3:+59566218 MS.gene74542:CDS
TCCAGCATCTCCAAATGCCA+CGG 0.612018 2.3:-59569496 None:intergenic
GGTCACTTGACTTTATATCC+CGG 0.614173 2.3:-59568363 None:intergenic
TTTGAACCCAGTATGGAATG+AGG 0.619584 2.3:+59568547 MS.gene74542:CDS
AGATGCAATGATAGAAGTCG+GGG 0.621145 2.3:+59567549 MS.gene74542:CDS
TTTCAGGTCTGCCAACATTG+GGG 0.624782 2.3:+59566158 MS.gene74542:intron
ATCTTCGAATGGATCTTGGA+AGG 0.628856 2.3:+59564726 MS.gene74542:CDS
AAGATTATTGACTGATGACA+TGG 0.632120 2.3:-59564708 None:intergenic
GTCACTGATAACATCTGCCG+TGG 0.637761 2.3:+59569479 MS.gene74542:CDS
ACTTGACTTTATATCCCGGA+CGG 0.645865 2.3:-59568359 None:intergenic
CCTTTGATATATGAGTACCA+AGG 0.688448 2.3:-59566218 None:intergenic
GATGCAATGATAGAAGTCGG+GGG 0.750201 2.3:+59567550 MS.gene74542:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTTATATTAAGATTAAA+AGG + chr2.3:59565056-59565075 MS.gene74542:intron 10.0%
!!! AATAGTTTTCATTTTTATTA+TGG - chr2.3:59566261-59566280 None:intergenic 10.0%
!! AAATGATATAACCTAATAAT+TGG - chr2.3:59565399-59565418 None:intergenic 15.0%
!! ATGAAAACAAAAATTGAAAT+TGG + chr2.3:59569155-59569174 MS.gene74542:intron 15.0%
!! CTATTTAGTATAGATAAAAT+AGG + chr2.3:59565799-59565818 MS.gene74542:intron 15.0%
!! TAAAAATGAAAACTATTTAC+TGG + chr2.3:59566264-59566283 MS.gene74542:intron 15.0%
!! TTTATTATGGTACATATTAA+TGG - chr2.3:59566248-59566267 None:intergenic 15.0%
!!! AAATGAAAAAACTTTGAAAT+AGG - chr2.3:59565831-59565850 None:intergenic 15.0%
!!! GTTCATTCTATTTATTATTT+TGG - chr2.3:59565001-59565020 None:intergenic 15.0%
!! AAAACTATCCATAAAACTAT+TGG - chr2.3:59567990-59568009 None:intergenic 20.0%
!! AAAAGAACAAATATACAACA+AGG - chr2.3:59569275-59569294 None:intergenic 20.0%
!! AAAAGATGCATACAAAAATT+TGG - chr2.3:59568096-59568115 None:intergenic 20.0%
!! AATGAAAAAATTAACAGTCT+AGG - chr2.3:59567154-59567173 None:intergenic 20.0%
!! ATAAAAATTTCTGATTAGAG+TGG - chr2.3:59566325-59566344 None:intergenic 20.0%
!! ATCCTAATACAAACAAAAAT+AGG - chr2.3:59567416-59567435 None:intergenic 20.0%
!! CCAAATAGTAAAAAGTTAAA+AGG - chr2.3:59567292-59567311 None:intergenic 20.0%
!! GAAAAATCATAACTTTGATT+CGG + chr2.3:59568480-59568499 MS.gene74542:intron 20.0%
!! TAATTGTATGCTAAACTTTA+AGG - chr2.3:59567193-59567212 None:intergenic 20.0%
!! TATATTAAGATTAAAAGGCT+AGG + chr2.3:59565061-59565080 MS.gene74542:intron 20.0%
!! TTAAAATGGTAGTTAACTAA+AGG - chr2.3:59567869-59567888 None:intergenic 20.0%
!! TTAAATAACCACGATTAAAA+TGG - chr2.3:59567883-59567902 None:intergenic 20.0%
!! TTATAAACACAACTAAAATG+AGG - chr2.3:59566919-59566938 None:intergenic 20.0%
!! TTGTGGTTTATATAAATATG+TGG + chr2.3:59566003-59566022 MS.gene74542:intron 20.0%
!! TTTATATGCTTAAAATGTTG+TGG + chr2.3:59566183-59566202 MS.gene74542:CDS 20.0%
!!! AAAAGAAGATATTTGATTTC+TGG + chr2.3:59569346-59569365 MS.gene74542:intron 20.0%
!!! AAAGATATAAGATTTTCAAG+AGG - chr2.3:59567730-59567749 None:intergenic 20.0%
!!! AAATTTGTTGAAGACAAAAA+TGG - chr2.3:59566392-59566411 None:intergenic 20.0%
!!! AATTTTTGTATGCATCTTTT+TGG + chr2.3:59568096-59568115 MS.gene74542:intron 20.0%
!!! ATTTTTGTATGCATCTTTTT+GGG + chr2.3:59568097-59568116 MS.gene74542:intron 20.0%
!!! CAGATTTTATGTTAATTTTC+AGG + chr2.3:59566142-59566161 MS.gene74542:intron 20.0%
!!! CCTTTTAACTTTTTACTATT+TGG + chr2.3:59567289-59567308 MS.gene74542:intron 20.0%
!!! TATAATTTTAAAGAATTCCG+CGG + chr2.3:59565021-59565040 MS.gene74542:intron 20.0%
!!! TCTATACTAAATAGTCTTAA+AGG - chr2.3:59565793-59565812 None:intergenic 20.0%
!!! TGTTTTGTATCCTATAATAA+TGG + chr2.3:59568656-59568675 MS.gene74542:intron 20.0%
!!! TTAAAGTTTTTTTTATCGCT+AGG + chr2.3:59564791-59564810 MS.gene74542:intron 20.0%
!!! TTGGTTTATATTTCTGATAT+TGG + chr2.3:59565689-59565708 MS.gene74542:intron 20.0%
! AAATAGAGTTAGAACTTGAA+TGG + chr2.3:59569655-59569674 MS.gene74542:CDS 25.0%
! ACAAACAGTATTTGATATCT+AGG + chr2.3:59568939-59568958 MS.gene74542:intron 25.0%
! AGTATAGATAAAATAGGTTG+AGG + chr2.3:59565805-59565824 MS.gene74542:intron 25.0%
! AGTGAACAAAGAATAAAAAG+AGG - chr2.3:59569051-59569070 None:intergenic 25.0%
! ATTTCTCACAATAAACTTGT+AGG - chr2.3:59568150-59568169 None:intergenic 25.0%
! TATAACCTAATATGATTGTC+AGG - chr2.3:59565646-59565665 None:intergenic 25.0%
! TCAAATACTGTTTGTATACT+TGG - chr2.3:59568934-59568953 None:intergenic 25.0%
! TGGATGCTTAATATATTCTT+TGG + chr2.3:59569217-59569236 MS.gene74542:intron 25.0%
! TTCTGCTAATTCAATTTATG+AGG + chr2.3:59567579-59567598 MS.gene74542:CDS 25.0%
!! ATGTTAGTAATTAGCTTCTT+AGG + chr2.3:59564817-59564836 MS.gene74542:intron 25.0%
!! CAAAAATAGGTCACATTTTA+TGG - chr2.3:59567403-59567422 None:intergenic 25.0%
!! CACTGACTAAAGATAAAATT+GGG - chr2.3:59569075-59569094 None:intergenic 25.0%
!! CATCTTTATTTGATTTCCAA+TGG - chr2.3:59568828-59568847 None:intergenic 25.0%
!! CTTAATATATTCTTTGGAGA+TGG + chr2.3:59569223-59569242 MS.gene74542:intron 25.0%
!! CTTTGTTTATGTGTGTATTT+GGG + chr2.3:59569304-59569323 MS.gene74542:intron 25.0%
!! TCACTGACTAAAGATAAAAT+TGG - chr2.3:59569076-59569095 None:intergenic 25.0%
!! TGCATTTCTTACAAAAGTTT+TGG - chr2.3:59566455-59566474 None:intergenic 25.0%
!! TTGATTGATAACTCATGTTT+CGG + chr2.3:59566418-59566437 MS.gene74542:intron 25.0%
!! TTTTCTGCTGATGATATAAT+GGG + chr2.3:59569435-59569454 MS.gene74542:CDS 25.0%
!! TTTTTCTGCTGATGATATAA+TGG + chr2.3:59569434-59569453 MS.gene74542:CDS 25.0%
!!! AAGTTCTTCCAATAGTTTTA+TGG + chr2.3:59567979-59567998 MS.gene74542:CDS 25.0%
!!! AATTTTAGTTGTATTCATCG+AGG + chr2.3:59566937-59566956 MS.gene74542:intron 25.0%
!!! AGGTAACTTTTAATTGGATT+AGG - chr2.3:59568770-59568789 None:intergenic 25.0%
!!! AGTTATTTTCCTATAGCTTA+AGG - chr2.3:59566070-59566089 None:intergenic 25.0%
!!! ATAATTTTAAAGAATTCCGC+GGG + chr2.3:59565022-59565041 MS.gene74542:intron 25.0%
!!! CAGCATTATTTTTTACTTAC+AGG + chr2.3:59567486-59567505 MS.gene74542:intron 25.0%
!!! GACCTATTTTTGTTTGTATT+AGG + chr2.3:59567411-59567430 MS.gene74542:intron 25.0%
!!! GTTATTTTCCTATAGCTTAA+GGG - chr2.3:59566069-59566088 None:intergenic 25.0%
!!! TATATTAGCTTTTTCCGTAA+GGG + chr2.3:59569001-59569020 MS.gene74542:intron 25.0%
!!! TATTGTTTTACAATAGCCAT+TGG - chr2.3:59564920-59564939 None:intergenic 25.0%
!!! TGATTTGATTTGAGATAAAC+AGG - chr2.3:59569099-59569118 None:intergenic 25.0%
!!! TTATATTAGCTTTTTCCGTA+AGG + chr2.3:59569000-59569019 MS.gene74542:intron 25.0%
!!! TTTTTGAGAAGTTGAATGAT+TGG + chr2.3:59565854-59565873 MS.gene74542:intron 25.0%
AACCAATTACGAACTGTATT+TGG - chr2.3:59568855-59568874 None:intergenic 30.0%
AACCTAATATGATGATTGTC+AGG - chr2.3:59565221-59565240 None:intergenic 30.0%
AATAATCTTCGAATGGATCT+TGG + chr2.3:59564722-59564741 MS.gene74542:CDS 30.0%
AATACACACATAAACAAAGG+AGG - chr2.3:59569303-59569322 None:intergenic 30.0%
AATTACGAACTGTATTTGGA+AGG - chr2.3:59568851-59568870 None:intergenic 30.0%
AGAATTCATTGGAATGTTGA+AGG + chr2.3:59568309-59568328 MS.gene74542:CDS 30.0%
AGTGCAGTCAAAATTATTGA+TGG + chr2.3:59569582-59569601 MS.gene74542:CDS 30.0%
ATACACACATAAACAAAGGA+GGG - chr2.3:59569302-59569321 None:intergenic 30.0%
ATCAGTCAATAATCTTCGAA+TGG + chr2.3:59564715-59564734 MS.gene74542:CDS 30.0%
ATCATGGTGTCCATTATTAT+AGG - chr2.3:59568669-59568688 None:intergenic 30.0%
ATTAAAGTTCACCCAAGAAA+AGG - chr2.3:59566039-59566058 None:intergenic 30.0%
ATTTGCCTGACAATCATATT+AGG + chr2.3:59565638-59565657 MS.gene74542:intron 30.0%
CAAAGAATAAAAAGAGGAAG+AGG - chr2.3:59569045-59569064 None:intergenic 30.0%
CAACACTTAATCTTATCAAC+TGG + chr2.3:59569379-59569398 MS.gene74542:intron 30.0%
CAAGGTTCAAAACAACATAT+GGG - chr2.3:59568387-59568406 None:intergenic 30.0%
CCAAATACACACATAAACAA+AGG - chr2.3:59569306-59569325 None:intergenic 30.0%
GAAAGATTTATTGCATCAGA+AGG + chr2.3:59565904-59565923 MS.gene74542:CDS 30.0%
GATTGAAAGACAAACATGTT+TGG - chr2.3:59566527-59566546 None:intergenic 30.0%
GTAACATGCAAATATTAGCT+TGG - chr2.3:59567218-59567237 None:intergenic 30.0%
TAAACACTAGTACACTACAT+AGG - chr2.3:59566763-59566782 None:intergenic 30.0%
TAAGGGATTAAAGGAGTTAA+AGG + chr2.3:59565131-59565150 MS.gene74542:intron 30.0%
TACCATTAATTCTACACTTC+AGG + chr2.3:59564938-59564957 MS.gene74542:intron 30.0%
TACTAGTGTTTATAAAGCCT+GGG + chr2.3:59566771-59566790 MS.gene74542:intron 30.0%
TATCTTGCAAGAAATGTAAC+TGG - chr2.3:59568747-59568766 None:intergenic 30.0%
TCAACATACTATCGTGATAT+TGG + chr2.3:59565350-59565369 MS.gene74542:intron 30.0%
TTAAACTCTCAGTTCTTAGT+AGG + chr2.3:59566886-59566905 MS.gene74542:intron 30.0%
TTCCAAATACAGTTCGTAAT+TGG + chr2.3:59568850-59568869 MS.gene74542:intron 30.0%
TTGAAGGTGAAAGTGATTAA+AGG + chr2.3:59568325-59568344 MS.gene74542:CDS 30.0%
TTGGTGTAATAGGAAAAACA+AGG - chr2.3:59567368-59567387 None:intergenic 30.0%
! CCTTTGTTTATGTGTGTATT+TGG + chr2.3:59569303-59569322 MS.gene74542:intron 30.0%
! CTAAATAGTCTTAAAGGTTC+AGG - chr2.3:59565787-59565806 None:intergenic 30.0%
! CTGAGAAGGTAACTTTTAAT+TGG - chr2.3:59568776-59568795 None:intergenic 30.0%
! CTTTCGTTAGTGATTTTGTT+GGG + chr2.3:59568247-59568266 MS.gene74542:intron 30.0%
! GCTTTAGACATCCAATTATT+AGG + chr2.3:59565385-59565404 MS.gene74542:intron 30.0%
! GTTCTCATTTTGTGTACTTA+AGG + chr2.3:59567105-59567124 MS.gene74542:intron 30.0%
! TTAGTAATTAGCTTCTTAGG+TGG + chr2.3:59564820-59564839 MS.gene74542:intron 30.0%
! TTCTTGCCATATTTTTCCTT+GGG + chr2.3:59568426-59568445 MS.gene74542:intron 30.0%
! TTTCTTGCCATATTTTTCCT+TGG + chr2.3:59568425-59568444 MS.gene74542:intron 30.0%
!! AACTCATTTTTCTGCAATCA+TGG - chr2.3:59568685-59568704 None:intergenic 30.0%
!! GATAGTTCATTAGTTTGTGT+TGG + chr2.3:59566605-59566624 MS.gene74542:intron 30.0%
!! GTTAACTACCATTTTAATCG+TGG + chr2.3:59567872-59567891 MS.gene74542:intron 30.0%
!! TCGGTTTTGTAAGTTTAGTT+AGG + chr2.3:59566812-59566831 MS.gene74542:intron 30.0%
!!! ACTTGATAGATTGCTTTTTC+CGG - chr2.3:59567963-59567982 None:intergenic 30.0%
!!! GTTTTGTTTTGAGTAATGCT+AGG + chr2.3:59564972-59564991 MS.gene74542:intron 30.0%
AACAGCGTGCAAAGTTTATA+CGG + chr2.3:59567650-59567669 MS.gene74542:CDS 35.0%
AACCAATATCAGAAAGCTAG+AGG - chr2.3:59565253-59565272 None:intergenic 35.0%
AACCTAATACTGCAATTAGG+TGG - chr2.3:59566661-59566680 None:intergenic 35.0%
AAGCACTAATTCAGAGAGAA+TGG + chr2.3:59568012-59568031 MS.gene74542:CDS 35.0%
AATGCCAACCTCTTAGAATT+TGG - chr2.3:59566844-59566863 None:intergenic 35.0%
AATTGCTTGATACCAAGATC+AGG - chr2.3:59568982-59569001 None:intergenic 35.0%
ACCAGAATGAACTAGGATTA+GGG + chr2.3:59567236-59567255 MS.gene74542:intron 35.0%
ACCCAAGAAAAGGATGAAAA+TGG - chr2.3:59566029-59566048 None:intergenic 35.0%
AGCCTGAAGTGTAGAATTAA+TGG - chr2.3:59564943-59564962 None:intergenic 35.0%
ATATGTTCCTCATTCCATAC+TGG - chr2.3:59568557-59568576 None:intergenic 35.0%
ATCAGTCATCTCTTCAATAG+GGG + chr2.3:59565084-59565103 MS.gene74542:intron 35.0%
ATCGTGGTTATTTAAACTGC+AGG + chr2.3:59567888-59567907 MS.gene74542:intron 35.0%
ATGCCAACCTCTTAGAATTT+GGG - chr2.3:59566843-59566862 None:intergenic 35.0%
ATTAAAGGAGTTAAAGGTCC+AGG + chr2.3:59565137-59565156 MS.gene74542:intron 35.0%
CAACATCATGTTGGTGTAAT+AGG - chr2.3:59567378-59567397 None:intergenic 35.0%
CAGTTTCCCAAGGAAAAATA+TGG - chr2.3:59568435-59568454 None:intergenic 35.0%
CCAAGGTTCAAAACAACATA+TGG - chr2.3:59568388-59568407 None:intergenic 35.0%
CCTTGGTACTCATATATCAA+AGG + chr2.3:59566218-59566237 MS.gene74542:CDS 35.0%
CCTTTGATATATGAGTACCA+AGG - chr2.3:59566221-59566240 None:intergenic 35.0%
CTATTACACCAACATGATGT+TGG + chr2.3:59567376-59567395 MS.gene74542:intron 35.0%
CTGATATTAGTTGTGACAAC+AGG + chr2.3:59568276-59568295 MS.gene74542:intron 35.0%
CTTCATCATTGTCTACTTCA+TGG - chr2.3:59567758-59567777 None:intergenic 35.0%
GAAGAGTGAATGAATGAAAC+AGG - chr2.3:59567270-59567289 None:intergenic 35.0%
GAAGGATAATCGTGTTTGTT+CGG + chr2.3:59565922-59565941 MS.gene74542:CDS 35.0%
GAGTTTGAACTCAATGACTT+TGG - chr2.3:59567006-59567025 None:intergenic 35.0%
GATCAGTCATCTCTTCAATA+GGG + chr2.3:59565083-59565102 MS.gene74542:intron 35.0%
GTACTAGTGTTTATAAAGCC+TGG + chr2.3:59566770-59566789 MS.gene74542:intron 35.0%
GTAGATGCAATGATAGAAGT+CGG + chr2.3:59567547-59567566 MS.gene74542:CDS 35.0%
TAAACTTGTAGGCTTTCATC+TGG - chr2.3:59568139-59568158 None:intergenic 35.0%
TAATGCTCCAGATCCTAAAT+GGG + chr2.3:59565949-59565968 MS.gene74542:CDS 35.0%
TACCAGAATGAACTAGGATT+AGG + chr2.3:59567235-59567254 MS.gene74542:intron 35.0%
TACTCCTTATTACACTTGTC+TGG - chr2.3:59568526-59568545 None:intergenic 35.0%
TAGATGCAATGATAGAAGTC+GGG + chr2.3:59567548-59567567 MS.gene74542:CDS 35.0%
TATGAGGCTTATATTCCTGA+AGG + chr2.3:59567595-59567614 MS.gene74542:CDS 35.0%
TATGTTCCTCATTCCATACT+GGG - chr2.3:59568556-59568575 None:intergenic 35.0%
TATTAGTTGTGACAACAGGA+AGG + chr2.3:59568280-59568299 MS.gene74542:intron 35.0%
TGAAATCGGTTACATACTGA+TGG + chr2.3:59569197-59569216 MS.gene74542:intron 35.0%
TGAATATGCCCTTAAGCTAT+AGG + chr2.3:59566058-59566077 MS.gene74542:intron 35.0%
TGAGAAGTTGAATGATTGGA+AGG + chr2.3:59565858-59565877 MS.gene74542:intron 35.0%
TGCCTGACAATCATCATATT+AGG + chr2.3:59565216-59565235 MS.gene74542:intron 35.0%
TGGAGAATGCCAAAATTGTT+AGG + chr2.3:59564840-59564859 MS.gene74542:intron 35.0%
TTAAAGGAGTTAAAGGTCCA+GGG + chr2.3:59565138-59565157 MS.gene74542:intron 35.0%
TTTACAGTGACAATGCATGT+CGG - chr2.3:59564766-59564785 None:intergenic 35.0%
TTTATGGTCCAACATCATGT+TGG - chr2.3:59567387-59567406 None:intergenic 35.0%
! AACCTCTTAGAATTTGGGTT+GGG - chr2.3:59566838-59566857 None:intergenic 35.0%
! ATGATTGGAAGGTCTTTTAC+AGG + chr2.3:59565869-59565888 MS.gene74542:intron 35.0%
! ATTCTTTGGAGATGGATGTT+TGG + chr2.3:59569231-59569250 MS.gene74542:intron 35.0%
! GAAGGTATGGTAGAATTCAT+TGG + chr2.3:59568298-59568317 MS.gene74542:CDS 35.0%
! GCTTTCGTTAGTGATTTTGT+TGG + chr2.3:59568246-59568265 MS.gene74542:intron 35.0%
! GTATGTAACCGATTTCAAGA+TGG - chr2.3:59569194-59569213 None:intergenic 35.0%
! TAGACGCGTGTAAATTTTCT+AGG + chr2.3:59565283-59565302 MS.gene74542:intron 35.0%
! TGATGATATAATGGGAGAAG+CGG + chr2.3:59569443-59569462 MS.gene74542:CDS 35.0%
!! ACTTACAAAACCGACTTGTA+AGG - chr2.3:59566806-59566825 None:intergenic 35.0%
!! ATAACTTTGATTCGGTGCTA+TGG + chr2.3:59568488-59568507 MS.gene74542:intron 35.0%
!! GAAATGTAACTGGCTTTACA+AGG - chr2.3:59568737-59568756 None:intergenic 35.0%
!! GCCATTTTCATCCTTTTCTT+GGG + chr2.3:59566025-59566044 MS.gene74542:intron 35.0%
!! TTCCTCTAGCTTTCTGATAT+TGG + chr2.3:59565248-59565267 MS.gene74542:intron 35.0%
!! TTTCTGATTAGAGTGGACTA+AGG - chr2.3:59566318-59566337 None:intergenic 35.0%
!!! CCATATGTTGTTTTGAACCT+TGG + chr2.3:59568385-59568404 MS.gene74542:CDS 35.0%
!!! TACTGGTTTTCTCATTGTTG+TGG + chr2.3:59566281-59566300 MS.gene74542:intron 35.0%
!!! TTAGTTTTTTTCTCCCTTGC+CGG - chr2.3:59565172-59565191 None:intergenic 35.0%
AAGAAATGCATCGCGTGATA+TGG + chr2.3:59566465-59566484 MS.gene74542:intron 40.0%
AAGCTGAGTGACAAATGACA+TGG - chr2.3:59567078-59567097 None:intergenic 40.0%
ACCACAAAAATCATGAGTGC+AGG - chr2.3:59565990-59566009 None:intergenic 40.0%
ACCCTAATCCTAGTTCATTC+TGG - chr2.3:59567240-59567259 None:intergenic 40.0%
ACTTGACTTTATATCCCGGA+CGG - chr2.3:59568362-59568381 None:intergenic 40.0%
ACTTGTGTGTGAGTTTCCAA+TGG + chr2.3:59564901-59564920 MS.gene74542:intron 40.0%
AGATGCAATGATAGAAGTCG+GGG + chr2.3:59567549-59567568 MS.gene74542:CDS 40.0%
AGCCACCTAATTGCAGTATT+AGG + chr2.3:59566656-59566675 MS.gene74542:intron 40.0%
ATCTTCGAATGGATCTTGGA+AGG + chr2.3:59564726-59564745 MS.gene74542:CDS 40.0%
ATGTTTGGCGATATGCAGAT+TGG + chr2.3:59569519-59569538 MS.gene74542:CDS 40.0%
ATTGGAAACTCACACACAAG+TGG - chr2.3:59564902-59564921 None:intergenic 40.0%
CAAAAATCATGAGTGCAGGA+AGG - chr2.3:59565986-59566005 None:intergenic 40.0%
CAACCTCTTAGAATTTGGGT+TGG - chr2.3:59566839-59566858 None:intergenic 40.0%
CATTCTGCTGTTCTTTCAAC+TGG + chr2.3:59567833-59567852 MS.gene74542:intron 40.0%
CCTGAAGGATATACAAAACC+CGG + chr2.3:59567610-59567629 MS.gene74542:CDS 40.0%
CTGTCCAGACAAGTGTAATA+AGG + chr2.3:59568519-59568538 MS.gene74542:CDS 40.0%
GAATGCCAAAATTGTTAGGC+CGG + chr2.3:59564844-59564863 MS.gene74542:intron 40.0%
GCATATAAACACCCCAATGT+TGG - chr2.3:59566172-59566191 None:intergenic 40.0%
GCATGTTACCAGAATGAACT+AGG + chr2.3:59567229-59567248 MS.gene74542:intron 40.0%
GCATTATGGACAGCTGAAAT+TGG + chr2.3:59568592-59568611 MS.gene74542:CDS 40.0%
GCGATATGCAGATTGGAAAA+TGG + chr2.3:59569526-59569545 MS.gene74542:CDS 40.0%
GGAGTAATTTGAACCCAGTA+TGG + chr2.3:59568540-59568559 MS.gene74542:CDS 40.0%
GGATCAGTCATCTCTTCAAT+AGG + chr2.3:59565082-59565101 MS.gene74542:intron 40.0%
GGCAACCTAATACTGCAATT+AGG - chr2.3:59566664-59566683 None:intergenic 40.0%
GGTCACTTGACTTTATATCC+CGG - chr2.3:59568366-59568385 None:intergenic 40.0%
GTAATGCTCCAGATCCTAAA+TGG + chr2.3:59565948-59565967 MS.gene74542:CDS 40.0%
GTGTCAGATGTTGAGAAATG+AGG - chr2.3:59568715-59568734 None:intergenic 40.0%
TAAAAAGCAGCAGTTTCCCA+AGG - chr2.3:59568445-59568464 None:intergenic 40.0%
TAACACCCTAGGTCTAAAGA+AGG + chr2.3:59566963-59566982 MS.gene74542:intron 40.0%
TCAGTCATCTCTTCAATAGG+GGG + chr2.3:59565085-59565104 MS.gene74542:intron 40.0%
TCATTGTGTTGGGTGCAAAA+GGG + chr2.3:59566706-59566725 MS.gene74542:intron 40.0%
TCCAACACCTTCATTGTGTT+GGG + chr2.3:59566696-59566715 MS.gene74542:intron 40.0%
TGACGACAATGCACTTATTG+AGG + chr2.3:59569557-59569576 MS.gene74542:CDS 40.0%
TGATTTCCAATGGCGAGAAT+GGG - chr2.3:59568818-59568837 None:intergenic 40.0%
TGCTTCCTTCTTTAGACCTA+GGG - chr2.3:59566971-59566990 None:intergenic 40.0%
TGGTTGAGCTAAGGGATTAA+AGG + chr2.3:59565122-59565141 MS.gene74542:intron 40.0%
TGTCTGTGACATTGGATGAT+TGG + chr2.3:59567512-59567531 MS.gene74542:CDS 40.0%
TTCATTGTGTTGGGTGCAAA+AGG + chr2.3:59566705-59566724 MS.gene74542:intron 40.0%
TTGATTTCCAATGGCGAGAA+TGG - chr2.3:59568819-59568838 None:intergenic 40.0%
TTGCTTCCTTCTTTAGACCT+AGG - chr2.3:59566972-59566991 None:intergenic 40.0%
TTTCAGCTGTCCATAATGCT+CGG - chr2.3:59568591-59568610 None:intergenic 40.0%
TTTCTCCAGATTCAACGTTC+TGG - chr2.3:59569638-59569657 None:intergenic 40.0%
TTTGAACCCAGTATGGAATG+AGG + chr2.3:59568547-59568566 MS.gene74542:CDS 40.0%
TTTGGAGATGCTGGAATGTT+TGG + chr2.3:59569504-59569523 MS.gene74542:CDS 40.0%
! AAAGAATTCCGCGGGTTTTA+AGG + chr2.3:59565030-59565049 MS.gene74542:intron 40.0%
! CAACCCAAATTCTAAGAGGT+TGG + chr2.3:59566837-59566856 MS.gene74542:intron 40.0%
! CTAGGTGTTGCAGCAAATAA+CGG + chr2.3:59565301-59565320 MS.gene74542:intron 40.0%
! TCCTGCACTCATGATTTTTG+TGG + chr2.3:59565986-59566005 MS.gene74542:intron 40.0%
! TTTTGCACCCAACACAATGA+AGG - chr2.3:59566706-59566725 None:intergenic 40.0%
!! AAGAATTCCGCGGGTTTTAA+GGG + chr2.3:59565031-59565050 MS.gene74542:intron 40.0%
!! ACAGGTTTTGTCTGTGACAT+TGG + chr2.3:59567504-59567523 MS.gene74542:intron 40.0%
!! GGATGTGTCTATCAAGTTGA+TGG + chr2.3:59567432-59567451 MS.gene74542:intron 40.0%
!! GGCCATTTTCATCCTTTTCT+TGG + chr2.3:59566024-59566043 MS.gene74542:intron 40.0%
!! TCCTCTAGTTCTATCCCTTA+CGG - chr2.3:59569018-59569037 None:intergenic 40.0%
!!! ATTTTCAGGTCTGCCAACAT+TGG + chr2.3:59566156-59566175 MS.gene74542:intron 40.0%
!!! TAGTTTTTTTCTCCCTTGCC+GGG - chr2.3:59565171-59565190 None:intergenic 40.0%
!!! TTTTCAGGTCTGCCAACATT+GGG + chr2.3:59566157-59566176 MS.gene74542:intron 40.0%
AAATGCATCGCGTGATATGG+AGG + chr2.3:59566468-59566487 MS.gene74542:intron 45.0%
AAGCTCCAGAACGTTGAATC+TGG + chr2.3:59569630-59569649 MS.gene74542:CDS 45.0%
ACAATCACCCTTAAAACCCG+CGG - chr2.3:59565041-59565060 None:intergenic 45.0%
AGCTCACTTGGTTGAGCTAA+GGG + chr2.3:59565114-59565133 MS.gene74542:intron 45.0%
ATAACATCTGCCGTGGCATT+TGG + chr2.3:59569486-59569505 MS.gene74542:CDS 45.0%
CACTACATAGGCCTATCTCT+AGG - chr2.3:59566751-59566770 None:intergenic 45.0%
CATCTCTTCAATAGGGGGAT+GGG + chr2.3:59565090-59565109 MS.gene74542:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG + chr2.3:59566695-59566714 MS.gene74542:intron 45.0%
CTGTGTAAGAGAAGCTGAGA+AGG - chr2.3:59568790-59568809 None:intergenic 45.0%
GATGCAATGATAGAAGTCGG+GGG + chr2.3:59567550-59567569 MS.gene74542:CDS 45.0%
GCTTGATACCAAGATCAGGA+GGG - chr2.3:59568978-59568997 None:intergenic 45.0%
GGAAAAACCTACGCCCATTT+AGG - chr2.3:59565965-59565984 None:intergenic 45.0%
GTTGCAGCAAATAACGGCAA+GGG + chr2.3:59565307-59565326 MS.gene74542:intron 45.0%
GTTGTGACAACAGGAAGGTA+TGG + chr2.3:59568285-59568304 MS.gene74542:intron 45.0%
TAGCTCACTTGGTTGAGCTA+AGG + chr2.3:59565113-59565132 MS.gene74542:intron 45.0%
TCATCTCTTCAATAGGGGGA+TGG + chr2.3:59565089-59565108 MS.gene74542:intron 45.0%
TCCGTAAGGGATAGAACTAG+AGG + chr2.3:59569014-59569033 MS.gene74542:intron 45.0%
TGCAATTAGGTGGCTAGAGA+CGG - chr2.3:59566651-59566670 None:intergenic 45.0%
TGCTGCTGCCATCTTGAAAT+CGG + chr2.3:59569183-59569202 MS.gene74542:intron 45.0%
TGCTTGATACCAAGATCAGG+AGG - chr2.3:59568979-59568998 None:intergenic 45.0%
TGTTGCAGCAAATAACGGCA+AGG + chr2.3:59565306-59565325 MS.gene74542:intron 45.0%
TTCAGCTGTCCATAATGCTC+GGG - chr2.3:59568590-59568609 None:intergenic 45.0%
! ACCCAACACAATGAAGGTGT+TGG - chr2.3:59566700-59566719 None:intergenic 45.0%
! AGTGTCCGGCCTAACAATTT+TGG - chr2.3:59564852-59564871 None:intergenic 45.0%
! TTTCAGGTCTGCCAACATTG+GGG + chr2.3:59566158-59566177 MS.gene74542:intron 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - chr2.3:59566697-59566716 None:intergenic 45.0%
!! CATCGAGGTTTTAACACCCT+AGG + chr2.3:59566952-59566971 MS.gene74542:intron 45.0%
!! CCGGGTTTTGTATATCCTTC+AGG - chr2.3:59567613-59567632 None:intergenic 45.0%
!! TGTTTTGAACCTTGGCACAC+AGG + chr2.3:59568393-59568412 MS.gene74542:CDS 45.0%
AAGGCACAGATTTAGCCGTC+CGG + chr2.3:59568344-59568363 MS.gene74542:CDS 50.0%
AAGGTCCAGGGTTCAAATCC+CGG + chr2.3:59565150-59565169 MS.gene74542:intron 50.0%
CAAGATCAGGAGGGTAAGTG+AGG - chr2.3:59568969-59568988 None:intergenic 50.0%
CAATGCATGTCGGATACCTG+AGG - chr2.3:59564756-59564775 None:intergenic 50.0%
CTCACTTACCCTCCTGATCT+TGG + chr2.3:59568967-59568986 MS.gene74542:intron 50.0%
CTGTCTGTTCCCGAGCATTA+TGG + chr2.3:59568578-59568597 MS.gene74542:CDS 50.0%
CTTTGCACGCTGTTCATGAC+TGG - chr2.3:59567644-59567663 None:intergenic 50.0%
GCAGCTCTCACCTTACAAGT+CGG + chr2.3:59566793-59566812 MS.gene74542:intron 50.0%
GGAAACTCACACACAAGTGG+CGG - chr2.3:59564899-59564918 None:intergenic 50.0%
GGCCCAACCCAAATTCTAAG+AGG + chr2.3:59566833-59566852 MS.gene74542:intron 50.0%
GTCACTGATAACATCTGCCG+TGG + chr2.3:59569479-59569498 MS.gene74542:CDS 50.0%
GTTACACCCATTCTCGCCAT+TGG + chr2.3:59568809-59568828 MS.gene74542:intron 50.0%
TCCAGATCCTAAATGGGCGT+AGG + chr2.3:59565955-59565974 MS.gene74542:intron 50.0%
TCCAGCATCTCCAAATGCCA+CGG - chr2.3:59569499-59569518 None:intergenic 50.0%
TTCATGACTGGCATCTGGTC+CGG - chr2.3:59567632-59567651 None:intergenic 50.0%
TTGAACCTTGGCACACAGGT+TGG + chr2.3:59568397-59568416 MS.gene74542:intron 50.0%
TTGTGTTGGGTGCAAAAGGG+TGG + chr2.3:59566709-59566728 MS.gene74542:intron 50.0%
! ACCTACGCCCATTTAGGATC+TGG - chr2.3:59565959-59565978 None:intergenic 50.0%
! CCTAGTTTGCGCATTGTGTC+CGG + chr2.3:59567941-59567960 MS.gene74542:CDS 50.0%
! GGTGTTGGAGGCTGCAATAA+AGG - chr2.3:59566685-59566704 None:intergenic 50.0%
AGAGACGGACGCAATGAAGG+CGG - chr2.3:59566636-59566655 None:intergenic 55.0%
AGCAACCAACCTGTGTGCCA+AGG - chr2.3:59568405-59568424 None:intergenic 55.0%
AGGCACAGATTTAGCCGTCC+GGG + chr2.3:59568345-59568364 MS.gene74542:CDS 55.0%
AGGCCTATCTCTAGGCAGTG+TGG - chr2.3:59566743-59566762 None:intergenic 55.0%
CAGGGTTCAAATCCCGGCAA+GGG + chr2.3:59565156-59565175 MS.gene74542:intron 55.0%
CCGGACACAATGCGCAAACT+AGG - chr2.3:59567944-59567963 None:intergenic 55.0%
CGCTGTTCATGACTGGCATC+TGG - chr2.3:59567637-59567656 None:intergenic 55.0%
GCTAGAGACGGACGCAATGA+AGG - chr2.3:59566639-59566658 None:intergenic 55.0%
GGCCTATCTCTAGGCAGTGT+GGG - chr2.3:59566742-59566761 None:intergenic 55.0%
GTCCCACACTGCCTAGAGAT+AGG + chr2.3:59566737-59566756 MS.gene74542:intron 55.0%
TCATGACTGGCATCTGGTCC+GGG - chr2.3:59567631-59567650 None:intergenic 55.0%
TGCATGTCGGATACCTGAGG+CGG - chr2.3:59564753-59564772 None:intergenic 55.0%
TGTGGTGTGCACAGAAGCCT+TGG + chr2.3:59566201-59566220 MS.gene74542:CDS 55.0%
TTGTAAGGTGAGAGCTGCCC+AGG - chr2.3:59566791-59566810 None:intergenic 55.0%
AGCGCCAGAGAGCAAGAGAG+GGG - chr2.3:59567794-59567813 None:intergenic 60.0%
AGGGGGATGGGTAGCTCACT+TGG + chr2.3:59565102-59565121 MS.gene74542:intron 60.0%
CAGCGCCAGAGAGCAAGAGA+GGG - chr2.3:59567795-59567814 None:intergenic 60.0%
CCAGGGTTCAAATCCCGGCA+AGG + chr2.3:59565155-59565174 MS.gene74542:intron 60.0%
CCTTGCCGGGATTTGAACCC+TGG - chr2.3:59565158-59565177 None:intergenic 60.0%
GAGACGGACGCAATGAAGGC+GGG - chr2.3:59566635-59566654 None:intergenic 60.0%
GCATGTCGGATACCTGAGGC+GGG - chr2.3:59564752-59564771 None:intergenic 60.0%
GCCGTGGCATTTGGAGATGC+TGG + chr2.3:59569495-59569514 MS.gene74542:CDS 60.0%
GTTAGGCCGGACACTGTGAC+CGG + chr2.3:59564857-59564876 MS.gene74542:intron 60.0%
TCAGCGCCAGAGAGCAAGAG+AGG - chr2.3:59567796-59567815 None:intergenic 60.0%
TTAGGCCGGACACTGTGACC+GGG + chr2.3:59564858-59564877 MS.gene74542:intron 60.0%
! TCACACACAAGTGGCGGAGC+TGG - chr2.3:59564893-59564912 None:intergenic 60.0%
CCAGAGAGCAAGAGAGGGGG+AGG - chr2.3:59567790-59567809 None:intergenic 65.0%
CCTCCCCCTCTCTTGCTCTC+TGG + chr2.3:59567787-59567806 MS.gene74542:intron 65.0%
CGAACCCCGGTCACAGTGTC+CGG - chr2.3:59564866-59564885 None:intergenic 65.0%
CGGAGCTGGAGTTCGAACCC+CGG - chr2.3:59564879-59564898 None:intergenic 65.0%
GATCTTGGAAGGCCCGCCTC+AGG + chr2.3:59564737-59564756 MS.gene74542:CDS 65.0%
GCGCCAGAGAGCAAGAGAGG+GGG - chr2.3:59567793-59567812 None:intergenic 65.0%
TAGGCCGGACACTGTGACCG+GGG + chr2.3:59564859-59564878 MS.gene74542:intron 65.0%
CGCGCGCGCGCGCGTTAAAT+AGG + chr2.3:59567328-59567347 MS.gene74542:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 59564710 59569695 59564710 ID=MS.gene74542
chr2.3 mRNA 59564710 59569695 59564710 ID=MS.gene74542.t1;Parent=MS.gene74542
chr2.3 exon 59564710 59564758 59564710 ID=MS.gene74542.t1.exon1;Parent=MS.gene74542.t1
chr2.3 CDS 59564710 59564758 59564710 ID=cds.MS.gene74542.t1;Parent=MS.gene74542.t1
chr2.3 exon 59565891 59565972 59565891 ID=MS.gene74542.t1.exon2;Parent=MS.gene74542.t1
chr2.3 CDS 59565891 59565972 59565891 ID=cds.MS.gene74542.t1;Parent=MS.gene74542.t1
chr2.3 exon 59566164 59566239 59566164 ID=MS.gene74542.t1.exon3;Parent=MS.gene74542.t1
chr2.3 CDS 59566164 59566239 59566164 ID=cds.MS.gene74542.t1;Parent=MS.gene74542.t1
chr2.3 exon 59567508 59567671 59567508 ID=MS.gene74542.t1.exon4;Parent=MS.gene74542.t1
chr2.3 CDS 59567508 59567671 59567508 ID=cds.MS.gene74542.t1;Parent=MS.gene74542.t1
chr2.3 exon 59567910 59568033 59567910 ID=MS.gene74542.t1.exon5;Parent=MS.gene74542.t1
chr2.3 CDS 59567910 59568033 59567910 ID=cds.MS.gene74542.t1;Parent=MS.gene74542.t1
chr2.3 exon 59568298 59568414 59568298 ID=MS.gene74542.t1.exon6;Parent=MS.gene74542.t1
chr2.3 CDS 59568298 59568414 59568298 ID=cds.MS.gene74542.t1;Parent=MS.gene74542.t1
chr2.3 exon 59568518 59568613 59568518 ID=MS.gene74542.t1.exon7;Parent=MS.gene74542.t1
chr2.3 CDS 59568518 59568613 59568518 ID=cds.MS.gene74542.t1;Parent=MS.gene74542.t1
chr2.3 exon 59569414 59569695 59569414 ID=MS.gene74542.t1.exon8;Parent=MS.gene74542.t1
chr2.3 CDS 59569414 59569695 59569414 ID=cds.MS.gene74542.t1;Parent=MS.gene74542.t1
Gene Sequence

>MS.gene74542

ATGTCATCAGTCAATAATCTTCGAATGGATCTTGGAAGGCCCGCCTCAGGTATCCGACATGCATTGTCACTGTAAACTAGTTTAAAGTTTTTTTTATCGCTAGGAAAATGTTAGTAATTAGCTTCTTAGGTGGAGAATGCCAAAATTGTTAGGCCGGACACTGTGACCGGGGTTCGAACTCCAGCTCCGCCACTTGTGTGTGAGTTTCCAATGGCTATTGTAAAACAATACCATTAATTCTACACTTCAGGCTTCTTGATGAGTTTTGTTTTGAGTAATGCTAGGTAGCCAAAATAATAAATAGAATGAACTATAATTTTAAAGAATTCCGCGGGTTTTAAGGGTGATTGTTATATTAAGATTAAAAGGCTAGGATCAGTCATCTCTTCAATAGGGGGATGGGTAGCTCACTTGGTTGAGCTAAGGGATTAAAGGAGTTAAAGGTCCAGGGTTCAAATCCCGGCAAGGGAGAAAAAAACTAACGTAACAATCAACATATTATCATTTGCCTGACAATCATCATATTAGGTTATATCATTTCCTCTAGCTTTCTGATATTGGTTTATCATGCTTTAGACGCGTGTAAATTTTCTAGGTGTTGCAGCAAATAACGGCAAGGGAGAAAAAACTAACGTAACAATCAACATACTATCGTGATATTGGTTTATCATGTATGCTTTAGACATCCAATTATTAGGTTATATCATTTCCTCTAGCTTTCTGATATTGGTTTATCATGCTTTAGACGCGTGTAAATTTTCTAGGTGTTGCAGCAAATAACGGCAAGGGAGAAAAAACTAACGTAACAATCAACATACTATCGTGATATTGGTTTATCATGTATGCTTTAGACGCGTGTAAATTTTCTAGGTGTTGCAGCAAATAACGGCAAGGGAGAAAAAACTAACGTAACAATCAACATACTATCATTTGCCTGACAATCATATTAGGTTATATCATTTCCTCTAGCTTTCTGATATTGGTTTATATTTCTGATATTGGTTTATAATGTATGCTTTAGACATGCTTTAGACGCGTGTAAATTTTCTAGGTGTTGCAGCAAATAACTTTAGTCCTGAACCTTTAAGACTATTTAGTATAGATAAAATAGGTTGAGGCCTATTTCAAAGTTTTTTCATTTGTTTTTTTGAGAAGTTGAATGATTGGAAGGTCTTTTACAGGTAGAAGAAGATTGAAAGATTTATTGCATCAGAAGGATAATCGTGTTTGTTCGGATTGTAATGCTCCAGATCCTAAATGGGCGTAGGTTTTTCCTTCCTGCACTCATGATTTTTGTGGTTTATATAAATATGTGGCCATTTTCATCCTTTTCTTGGGTGAACTTTAATGAATATGCCCTTAAGCTATAGGAAAATAACTAAATGTAAAAATAAAATAGAGAAATATGACGTGAACATTGCTACTGTGAATTCAGATTTTATGTTAATTTTCAGGTCTGCCAACATTGGGGTGTTTATATGCTTAAAATGTTGTGGTGTGCACAGAAGCCTTGGTACTCATATATCAAAGGTAAACCATTAATATGTACCATAATAAAAATGAAAACTATTTACTGGTTTTCTCATTGTTGTGGAAGCATTGTTTCCTTAGTCCACTCTAATCAGAAATTTTTATTCTTTTTAATGTGCAATATTTGAAGCTTTAACTATGTATCTTTTCCATTTTTGTCTTCAACAAATTTAAAAAGTTGATTGATAACTCATGTTTCGGTTGTTCATTTTCCAAAACTTTTGTAAGAAATGCATCGCGTGATATGGAGGAAAAGAAAATGAGTCACTTACTTTCATGATTTACCAAACATGTTTGTCTTTCAATCTGACATTCACGAGACATGTTTAAGTGCATTAAATTGCAGTTACATGTATTAGATGCATGATAGTTCATTAGTTTGTGTTGGAAATCCCGCCTTCATTGCGTCCGTCTCTAGCCACCTAATTGCAGTATTAGGTTGCCTTTATTGCAGCCTCCAACACCTTCATTGTGTTGGGTGCAAAAGGGTGGATTTAGTCCCACACTGCCTAGAGATAGGCCTATGTAGTGTACTAGTGTTTATAAAGCCTGGGCAGCTCTCACCTTACAAGTCGGTTTTGTAAGTTTAGTTAGGCCCAACCCAAATTCTAAGAGGTTGGCATTAGTTATGAAAAATATGTCTAAGTTAAACTCTCAGTTCTTAGTAGGTATTATTCCTCATTTTAGTTGTGTTTATAATTTTAGTTGTATTCATCGAGGTTTTAACACCCTAGGTCTAAAGAAGGAAGCAAAACTATCTTGACCAAAGTCATTGAGTTCAAACTCGATATTAAAAGCATGATGATCATTTTGAGAAAATAAATAAATTAGTAAGCCATGTCATTTGTCACTCAGCTTCAGTTCAGTTCTCATTTTGTGTACTTAAGGTTGTTTTTCTGAAGCATAACTAACCTAGACTGTTAATTTTTTCATTCAGAATGCATTTCTATCCTTAAAGTTTAGCATACAATTAAGCCAAGCTAATATTTGCATGTTACCAGAATGAACTAGGATTAGGGTCGTTCTTCCTGTTTCATTCATTCACTCTTCCTTTTAACTTTTTACTATTTGGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTTAAATAGGATCTTATGCTATGACCTTGTTTTTCCTATTACACCAACATGATGTTGGACCATAAAATGTGACCTATTTTTGTTTGTATTAGGATGTGTCTATCAAGTTGATGGTGCAAATGCTGAATTTAATGTATTTGTTTGACAGCATTATTTTTTACTTACAGGTTTTGTCTGTGACATTGGATGATTGGTCAGATGATGAAGTAGATGCAATGATAGAAGTCGGGGGAAATGCTTCTGCTAATTCAATTTATGAGGCTTATATTCCTGAAGGATATACAAAACCCGGACCAGATGCCAGTCATGAACAGCGTGCAAAGTTTATACGGTTAGACATGCTTTCATATACACAGTGAATTGTTTGTAGTCTGCATTATTTAGTTCCTCTTGAAAATCTTATATCTTTTATCACCATGAAGTAGACAATGATGAAGATTGTTTTTCCTCCCCCTCTCTTGCTCTCTGGCGCTGATTCATTCATTTTCTTGACATTCTGCTGTTCTTTCAACTGGTTATGTGAATCCTTTAGTTAACTACCATTTTAATCGTGGTTATTTAAACTGCAGGTCAAAGTATGAGTTGCAAGAATTTTTGAAGCCTAGTTTGCGCATTGTGTCCGGAAAAAGCAATCTATCAAGTTCTTCCAATAGTTTTATGGATAGTTTTAAAAGCACTAATTCAGAGAGAATGGTAACTTTGATTATGTGTTAGTCTTTTGTTTTTCTAACTGCTTTTATGAGTGACAGAGACCAAATTTTTGTATGCATCTTTTTGGGTTGAATCATTGTTGTACCAGATGAAAGCCTACAAGTTTATTGTGAGAAATAATTTAATAATATAGATGACATGAAGCATGTTTTATTGTTCAACACTATTATATCTGTAGTAATAGCACTGCAGCTGCTTTCGTTAGTGATTTTGTTGGGCAGTGACTGATATTAGTTGTGACAACAGGAAGGTATGGTAGAATTCATTGGAATGTTGAAGGTGAAAGTGATTAAAGGCACAGATTTAGCCGTCCGGGATATAAAGTCAAGTGACCCATATGTTGTTTTGAACCTTGGCACACAGGTTGGTTGCTTTTCTTGCCATATTTTTCCTTGGGAAACTGCTGCTTTTTATTTTTATTTACAATTGAAAAATCATAACTTTGATTCGGTGCTATGGCGTACAGACTGTCCAGACAAGTGTAATAAGGAGTAATTTGAACCCAGTATGGAATGAGGAACATATGCTGTCTGTTCCCGAGCATTATGGACAGCTGAAATTGGTATGATTGAATTTTATGTTTTGAATGATAGACACTAAATTCTGTTTTGTATCCTATAATAATGGACACCATGATTGCAGAAAAATGAGTTCCTTCATCCTCATTTCTCAACATCTGACACCTTGTAAAGCCAGTTACATTTCTTGCAAGATACCTAATCCAATTAAAAGTTACCTTCTCAGCTTCTCTTACACAGTTACACCCATTCTCGCCATTGGAAATCAAATAAAGATGCCTTCCAAATACAGTTCGTAATTGGTTATAACTTGCAATAACTTGAAAGAAAAACAAAAATATGAATCTGTGACAAGAATGAACCAAGTATACAAACAGTATTTGATATCTAGGCGTTCCTCACTTACCCTCCTGATCTTGGTATCAAGCAATTATATTAGCTTTTTCCGTAAGGGATAGAACTAGAGGATCAGCCTCTTCCTCTTTTTATTCTTTGTTCACTTCCCAATTTTATCTTTAGTCAGTGACCTGTTTATCTCAAATCAAATCAAATCAGAATTGAACGACATTCACTGTTCAGTGTAATATGAAAACAAAAATTGAAATTGGTTGCATGCTGCTGCCATCTTGAAATCGGTTACATACTGATGGATGCTTAATATATTCTTTGGAGATGGATGTTTGGACGTAAATTTATATTGCACCTTGTTGTATATTTGTTCTTTTTCTTCCCTCCTTTGTTTATGTGTGTATTTGGGAGTGTACATGCTAACATAGAAAAGAAGATATTTGATTTCTGGTTTAAGAACACAACACTTAATCTTATCAACTGGCTATGATTGCAGAAAGTATTTGATCATGACACTTTTTCTGCTGATGATATAATGGGAGAAGCGGACATTGATCTTCAGTCACTGATAACATCTGCCGTGGCATTTGGAGATGCTGGAATGTTTGGCGATATGCAGATTGGAAAATGGTTGAAATCTGACGACAATGCACTTATTGAGGATAGTGCAGTCAAAATTATTGATGGAAAAGTTAAACAAATGATGACACTCAAGCTCCAGAACGTTGAATCTGGAGAAATAGAGTTAGAACTTGAATGGATTTCTCTTGATCACTAG
Protein sequence

>MS.gene74542.t1

MSSVNNLRMDLGRPASGRRRLKDLLHQKDNRVCSDCNAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDDWSDDEVDAMIEVGGNASANSIYEAYIPEGYTKPGPDASHEQRAKFIRSKYELQEFLKPSLRIVSGKSNLSSSSNSFMDSFKSTNSERMEGMVEFIGMLKVKVIKGTDLAVRDIKSSDPYVVLNLGTQTVQTSVIRSNLNPVWNEEHMLSVPEHYGQLKLKVFDHDTFSADDIMGEADIDLQSLITSAVAFGDAGMFGDMQIGKWLKSDDNALIEDSAVKIIDGKVKQMMTLKLQNVESGEIELELEWISLDH